mRNA_D-dudresnayi_contig9336.28129.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9336.28129.1
Unique NamemRNA_D-dudresnayi_contig9336.28129.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig9336.28129.1 vs. uniprot
Match: A0A7S3HF70_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HF70_9STRA)

HSP 1 Score: 945 bits (2443), Expect = 0.000e+0
Identity = 472/535 (88.22%), Postives = 494/535 (92.34%), Query Frame = 1
Query:    1 MASFDKDAATMRVIAELKRLYKTKILPLEQLYKFDIFNSPHLTDAEFDSKPQVMLLGQYSVGKTTFIRYLLGCDFPGQRIGPEPTTDRFTAIIDGPDERIIPGNALAVSHDMPYRGLERFGVAFLNRFEGAQLPNQVLKNITLIDTPGVLSGEKQRVARGYDFCQVCTWFAARADLILLLFDAHKLDISDEFRNAIDSLKGNDDKIRCILNKADQVDRQRLMRVYGALMWSLGKVVKSPEVLRVYIGSFWDQPLMFDDNATLFEMEEKDLMRDLKDLPRNSAVRKINELVKRVRLAKVHAYIVGYLKEQMPVMMGHAKKQTQLIETLPQVFRTVMKKYNLAPGDFPDITDMQGKLREFDFSKFQVVKQKYIDDAEHVMSTEFPRLMEALPRSLDSYAQTA--ISPSHVPVVFDTVPQAQARVLEEDANPWGDD--NDTSGKDSGWALSEYVPQYKPQFDGIATNGKVSGGAAKKVLGSSGLPTTALRDIWNLADVDSDGQLDLHEFVIAMFLIDMVKQGHAVPAKLDPEMVPPGK 1593
            MASF+KDAATMRVIAELKRLYKTKILPLEQLYKFD+FNSPHLTDAEFDSKPQVMLLGQYSVGKTTFIRYLLG DFPGQRIGPEPTTDRFTAIIDGPDER+IPGNALAVSHDMPYRGLERFGVAFLNRFEGAQLPNQVLKNITLIDTPGVLSGEKQRVARGYDFCQVCTWFA RADLI+LLFDAHKLDISDEFRNAIDSLKGNDDKIRCILNKADQVDRQ+LMRVYGALMWSLGKV+KSPEVLRVYIGSFWDQPLM++DNA LFEMEEKDLMRDLKDLPRNSAVRKINELVKRVRLAKVHAYI+G+LKEQMPVMMGHAKKQ QLIETLP VFR+VMKKYNLAPGDFPDI + Q  L EFDFSKFQV+KQKYIDDAEHVMSTEFPRLMEALPRSLDSYA     +   H+P+V+D  P     V E+DANPWGDD  +  + K SGWALSEYV QYKPQFD IA NG V+GGAAKKVLG+SGLP   LRDIWNLADVDSDG LDLHEFVIAMFLIDMVKQGHAVPA LDPEMVPPGK
Sbjct:    1 MASFEKDAATMRVIAELKRLYKTKILPLEQLYKFDVFNSPHLTDAEFDSKPQVMLLGQYSVGKTTFIRYLLGQDFPGQRIGPEPTTDRFTAIIDGPDERVIPGNALAVSHDMPYRGLERFGVAFLNRFEGAQLPNQVLKNITLIDTPGVLSGEKQRVARGYDFCQVCTWFAGRADLIILLFDAHKLDISDEFRNAIDSLKGNDDKIRCILNKADQVDRQKLMRVYGALMWSLGKVIKSPEVLRVYIGSFWDQPLMYEDNAQLFEMEEKDLMRDLKDLPRNSAVRKINELVKRVRLAKVHAYIIGHLKEQMPVMMGHAKKQAQLIETLPTVFRSVMKKYNLAPGDFPDIAEFQKSLAEFDFSKFQVIKQKYIDDAEHVMSTEFPRLMEALPRSLDSYATGGPPVPSGHLPIVYDVKPTPAFAVAEDDANPWGDDAADPVAAKVSGWALSEYVSQYKPQFDSIAKNGLVTGGAAKKVLGASGLPVANLRDIWNLADVDSDGNLDLHEFVIAMFLIDMVKQGHAVPAALDPEMVPPGK 535          
BLAST of mRNA_D-dudresnayi_contig9336.28129.1 vs. uniprot
Match: D7G401_ECTSI (RME1, RME-1/EHD family ATPase with a C-terminal EH domain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G401_ECTSI)

HSP 1 Score: 618 bits (1594), Expect = 1.350e-215
Identity = 325/586 (55.46%), Postives = 405/586 (69.11%), Query Frame = 1
Query:    1 MASFDKDAATMRVIAELKRLYKTKILPLEQLYKFDIFNSPHLTDAEFDSKPQVMLLGQYSVGKTTFIRYLLGCDFPGQRIGPEPTTDRFTAIIDGPDERIIPGNALAVSHDMPYRGLERFGVAFLNRFEGAQLPNQVLKNITLIDTPGVLSGEKQRVARGYDFCQVCTWFAARADLILLLFDAHKLDISDEFRNAIDSLKGNDDKIRCILNKADQVDRQRLMRVYGALMWSLGKVVKSPEVLRVYIGSFWDQPLMFDDNATLFEMEEKDLMRDLKDLPRNSAVRKINELVKRVRLAKVHAYIVGYLKEQMPVMMGHAKKQTQLIETLPQVFRTVMKKYNLAPGDFPDITDMQGKLREFDFSKFQVVKQKYIDDAEHVMSTEFPRLMEALPRSL-----DSYAQTAISPSH---VPVVFDTV-------------------------------------------PQAQARVLE---EDANPWGDDNDTSGKDSGWALSEYVPQYKPQFDGIA-TNGKVSGGAAKKVLGSSGLPTTALRDIWNLADVDSDGQLDLHEFVIAMFLIDMVKQGHAVPAKLDPEMVPPGK 1593
            M+  D+D AT  V+  LKRLY TK+ PLEQ Y F  F+SP LTD+EF+SKPQV++ GQYS GKT+FIRYLLG DFPGQRIGPEPTTDRF A++DG DER++PGNAL VS ++PYRGL+RFGV+FLN+FE +QLP+ VL+NIT++DTPGVLSGEKQRV+RGYDF  VC WFA RADLILLLFDAHKLDISDEF+  I+ LKG DDKIR ILNKADQVDRQ+LMRVYGALMWS+GK++++PEVLRVY+GSFWD+PLM+DDNA LF+MEE+DLM DL++LPRNSAVRKINELVKR RLAKVHAYI+GYL+ QMP MMG  K Q QL   L QVFR VMK++NLAPGDFPD+   + KL + +F+KF  +K K +++ + ++S + PRLME LPR++     D   +  +  S+    P  ++                                             P   A   +   +D+NP+GD+   S    GWAL     + +  F+      GK+S   A+  L  SGLP   LR IW+L+D+D+DG LDL EF +AM L D  K G  +P  L   MVPP K
Sbjct:    1 MSMADQDEATAAVVEGLKRLYHTKLKPLEQTYMFGWFHSPPLTDSEFESKPQVLMCGQYSTGKTSFIRYLLGRDFPGQRIGPEPTTDRFVAVMDGSDERVVPGNALTVSPNLPYRGLDRFGVSFLNKFEASQLPSPVLRNITIVDTPGVLSGEKQRVSRGYDFVNVCHWFAERADLILLLFDAHKLDISDEFKAVIERLKGQDDKIRVILNKADQVDRQKLMRVYGALMWSMGKIIRTPEVLRVYVGSFWDEPLMYDDNAALFDMEERDLMNDLRELPRNSAVRKINELVKRCRLAKVHAYIIGYLRAQMPSMMGKEKVQKQLTADLAQVFRAVMKQHNLAPGDFPDLEPFRSKLADTNFTKFPKLKVKMLEELDEMLSVDIPRLMEMLPRTVAPTRADEQIRNFMQESNDTPTPPKYNAPGGASRXXXXXXXXXXXXXXXXXGDQRWXXXXXXXXXXGGSPPEPTGVANPFKPPPQDSNPFGDEPSAS----GWALEVEAAELRGLFEEYEPVAGKLSAVNARAPLVQSGLPNDTLRVIWDLSDMDNDGMLDLEEFTVAMHLCDRTKAGEPLPDGLPRNMVPPSK 582          
BLAST of mRNA_D-dudresnayi_contig9336.28129.1 vs. uniprot
Match: A0A835YYV9_9STRA (RME1, RME-1/EHD family ATPase with a C-terminal EH domain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYV9_9STRA)

HSP 1 Score: 617 bits (1592), Expect = 3.850e-215
Identity = 332/592 (56.08%), Postives = 406/592 (68.58%), Query Frame = 1
Query:    1 MASFDKDAATMRVIAELKRLYKTKILPLEQLYKFDIFNSPHLTDAEFDSKPQVMLLGQYSVGKTTFIRYLLGCDFPGQRIGPEPTTDRFTAIIDGPDERIIPGNALAVSHDMPYRGLERFGVAFLNRFEGAQLPNQVLKNITLIDTPGVLSGEKQRVARGYDFCQVCTWFAARADLILLLFDAHKLDISDEFRNAIDSLKGNDDKIRCILNKADQVDRQRLMRVYGALMWSLGKVVKSPEVLRVYIGSFWDQPLMFDDNATLFEMEEKDLMRDLKDLPRNSAVRKINELVKRVRLAKVHAYIVGYLKEQMPVMMGHAKKQTQLIETLPQVFRTVMKKYNLAPGDFPDITDMQGKLREFDFSKFQVVKQKYIDDAEHVMSTEFPRLMEALPRS-LDSYAQTAI-SPSHVP--VVFD----------------------------------------------------TVPQAQARVLEEDANPWGDDNDTSGKDSG----WALSEYVPQYKPQFDGIATNGKV-SGGAAKKVLGSSGLPTTALRDIWNLADVDSDGQLDLHEFVIAMFLIDMVKQGHAVPAKLDPEMVPPGK 1593
            M+  D+D AT  VI  LK+LY TK+ PLE  Y FD F+SP LTD+EFDSKPQV+++GQYS GKT+FIRYLLG DFPGQRIGPEPTTDRF A++DG DER+IPGNAL VS ++PYRGL+RFGVAFLN+FEG+QLP+ VL+NIT++DTPGVLSGEKQRVARGYDF QV TWFA RADLILLLFDAHKLDISDEFR  I+ L+G DDKIRCILNKAD VDRQ+LMRVYGALMWS+GK++K+PEVLRVY+GSFWD+PLM+DDNA LF+MEE+DLM DL+DLPRNSAVRKINELVKR RLAKVHAYI+G+L+ QMP M+G  K Q +L++ +  VFR VMK+YNLAPGDFPD+   + K  E  F+KF  +K K + D + V+S + PRLME LP S + + A+  + S  H P  + FD                                                    +VPQ Q+     +A   G  N   G  +     WAL E       +F+ +   G + +  AA+  L  +GL T  LR IW+L+D+D DG LDL E+ +AM L    K G  VPA L  E+VPP K
Sbjct:    1 MSMADRDEATKAVIDGLKKLYHTKLKPLESCYLFDHFHSPLLTDSEFDSKPQVLMIGQYSTGKTSFIRYLLGRDFPGQRIGPEPTTDRFVAVMDGADERVIPGNALTVSPNLPYRGLDRFGVAFLNKFEGSQLPSPVLRNITIVDTPGVLSGEKQRVARGYDFVQVNTWFAERADLILLLFDAHKLDISDEFRAVIEKLRGQDDKIRCILNKADAVDRQKLMRVYGALMWSMGKIIKTPEVLRVYVGSFWDEPLMYDDNAALFDMEERDLMNDLRDLPRNSAVRKINELVKRCRLAKVHAYIIGHLRAQMPGMVGKEKAQRKLMQDMGSVFRAVMKQYNLAPGDFPDLETFRSKCEELSFAKFPKLKPKMLQDLDEVLSQDIPRLMEMLPTSDVRTRAEREVASLLHAPGPLQFDDQLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAHATSLSALSAARTSVPQWQSSKAASEAQGMGVPNPFGGSVAEEPLPWALEEEAHYNIDKFNSLGPQGGLLAATAARGPLMETGLSTDMLRVIWDLSDMDKDGALDLAEYTVAMHLCAAAKAGDPVPAALPAELVPPDK 592          
BLAST of mRNA_D-dudresnayi_contig9336.28129.1 vs. uniprot
Match: A0A7S2N1J3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N1J3_9STRA)

HSP 1 Score: 607 bits (1565), Expect = 1.690e-211
Identity = 320/541 (59.15%), Postives = 397/541 (73.38%), Query Frame = 1
Query:    4 ASFDKDAA--TMRVIAELKRLYKTKILPLEQLYKFDIF-NSPHLTDAEFDSKPQVMLLGQYSVGKTTFIRYLLGCDFPGQRIGPEPTTDRFTAIIDGPDERIIPGNALAVSHDMPYRGLERFGVAFLNRFEGAQLPNQVLKNITLIDTPGVLSGEKQRVARGYDFCQVCTWFAARADLILLLFDAHKLDISDEFRNAIDSLKGNDDKIRCILNKADQVDRQRLMRVYGALMWSLGKVVKSPEVLRVYIGSFWDQPLMFDDNATLFEMEEKDLMRDLKDLPRNSAVRKINELVKRVRLAKVHAYIVGYLKEQMPVMMGHAKKQTQLIETLPQVFRTVMKKYNLAPGDFPDITDMQGKLREFDFSKFQVVKQKYIDDAEHVMSTEFPRLMEALPRSLDSYAQ------TAISPSHVPVVFDTVPQAQARVLEEDANPWGDDNDTSGKDSGWALSEYVPQYKPQFDGIATN-GKVSGGAAKKVLGSSGLPTTALRDIWNLADVDSDGQLDLHEFVIAMFLID-MVKQGHAVPAKLDPEMVPPGK 1593
            AS   DAA  T  V A LK++YK  +LP+E+ +++D F  SP LTD EFDSKPQ++L+GQYSVGKT+FIRYLLG DFPGQR+GPEPTTDRFT +I+GP+ER IPGNAL+V  ++P+RGLERFGV+FL+RFEG+QLP+ VLK++TL+DTPG+LSGEKQR+ RGYDF +V  WFA RADLI+LLFDAHKLDISDE +  ID LKG++DKIRCILNKADQ+DRQ+LMRVYGAL+WSLGK + SPEV RVY+GSFW +PL   DNA LFE EEKDLM+DL  LPR SAVRKINELVKRVR  K  AY+VGYLK QMP MMG  KKQ +LI  LP VFRT+MKKYNLAPGDFPDIT    KL++  FS+F  +KQ +ID  E  ++ + PRLME LP   D+ A       T   PS VPV        +    E DANP+G + +   +D+ WAL +   +    F  +    G +S   A+ VL  +GL  + LR IWNL+D+D DG  D  E+V+AMFL D ++++G  +P +L P +VPP K
Sbjct:   17 ASPGGDAADKTNLVAARLKQIYKKAVLPVEKRFRYDYFYESPFLTDIEFDSKPQLLLVGQYSVGKTSFIRYLLGRDFPGQRVGPEPTTDRFTVLINGPEERTIPGNALSVHPELPFRGLERFGVSFLSRFEGSQLPSTVLKSVTLVDTPGILSGEKQRLNRGYDFTKVVAWFAERADLIILLFDAHKLDISDELKATIDVLKGHEDKIRCILNKADQIDRQQLMRVYGALLWSLGKTMSSPEVARVYVGSFWSEPLQNMDNADLFEREEKDLMKDLAVLPRQSAVRKINELVKRVRKVKTLAYVVGYLKSQMPTMMGKEKKQQKLINDLPNVFRTIMKKYNLAPGDFPDITKFSNKLKDTKFSEFHSMKQDHIDQLEKCLTNDIPRLMEQLPSEKDTPASLKAKMDTTSGPS-VPVPTRANKFGKGH-NEYDANPFGYEEED--EDNYWALQDSAERLYDSFIALGPEAGFLSPAIARDVLVKTGLDKSQLRQIWNLSDIDRDGHFDHDEYVVAMFLCDAVIQKGRPIPKELPPSVVPPSK 553          
BLAST of mRNA_D-dudresnayi_contig9336.28129.1 vs. uniprot
Match: A0A7S0Y574_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y574_9STRA)

HSP 1 Score: 605 bits (1560), Expect = 7.310e-211
Identity = 306/529 (57.84%), Postives = 391/529 (73.91%), Query Frame = 1
Query:   28 TMRVIAELKRLYKTKILPLEQLYKFDIF-NSPHLTDAEFDSKPQVMLLGQYSVGKTTFIRYLLGCDFPGQRIGPEPTTDRFTAIIDGPDERIIPGNALAVSHDMPYRGLERFGVAFLNRFEGAQLPNQVLKNITLIDTPGVLSGEKQRVARGYDFCQVCTWFAARADLILLLFDAHKLDISDEFRNAIDSLKGNDDKIRCILNKADQVDRQRLMRVYGALMWSLGKVVKSPEVLRVYIGSFWDQPLMFDDNATLFEMEEKDLMRDLKDLPRNSAVRKINELVKRVRLAKVHAYIVGYLKEQMPVMMGHAKKQTQLIETLPQVFRTVMKKYNLAPGDFPDITDMQGKLREFDFSKFQVVKQKYIDDAEHVMSTEFPRLMEALPRSLDS----YAQTAISPSHVPVVFDTVPQAQARVLEEDANPWGDDNDTSGKDSGWALSEYVPQYKPQFDGIATNGK-VSGGAAKKVLGSSGLPTTALRDIWNLADVDSDGQLDLHEFVIAMFLID-MVKQGHAVPAKLDPEMVPPGK 1593
            T  +   LK +Y+  +LP+E+ YK+D F  SP L+D+EFD+KPQVML+GQYSVGKT+FIRYLLG DFPGQRIGPEPTTDRFT +I+GP+ER+IPGNAL+V  D+P+RGLERFGV+FL+RFEG+Q+P+ VL+++TL+DTPG+LSGEKQRV RGYDF +V  WFA RADLIL+LFDAHKLDISDE + AIDSLKGN+DKIRC+LNKADQ+DRQ+LMRVYGAL+WSLGK + SPEV RVY+GSFW +PL   DN+ LFEMEEKDLM+DL  LPR SAVRKINELVKR+R  K  A+I+ +LK+QMP +MG  KKQ +LI  LP VFRT++KK++LAPGDFPDITD   KLR+  FS+F  + QK ID  + ++  + P LME LP   D+     A+ A +PS   +      +        ++NP+G   D   KD  WAL +   +    F  +   G  +S   A+ VL  +GL    LR IWNL+D+D DG  DL E+V+AMFL D ++++G  +PA+L   +VPP K
Sbjct:   29 TSVITGRLKSIYRKTVLPVEKRYKYDYFYESPFLSDSEFDAKPQVMLIGQYSVGKTSFIRYLLGRDFPGQRIGPEPTTDRFTVLINGPEERVIPGNALSVHPDLPFRGLERFGVSFLSRFEGSQMPSSVLRSVTLVDTPGILSGEKQRVNRGYDFNKVTGWFAERADLILVLFDAHKLDISDELKGAIDSLKGNEDKIRCVLNKADQIDRQQLMRVYGALLWSLGKTMSSPEVARVYVGSFWQEPLNSMDNSALFEMEEKDLMKDLAILPRQSAVRKINELVKRIRKVKTLAFIIAHLKQQMPTLMGKEKKQNKLIADLPTVFRTILKKHSLAPGDFPDITDFSNKLRDVKFSEFNTLSQKQIDGLDSILEKDIPALMEQLPSEKDTPETLQAKMAGAPSAANIPIPKTSKKFGNRDNYESNPFGPSQDN--KDHYWALQDSAERLASSFAALGPEGGFLSTQKARSVLVKTGLEKDHLRQIWNLSDMDRDGLFDLDEYVVAMFLCDAVIQKGRPIPAELPASVVPPSK 555          
BLAST of mRNA_D-dudresnayi_contig9336.28129.1 vs. uniprot
Match: B8CBW3_THAPS (Receptor mediated endocytosis protein-like protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBW3_THAPS)

HSP 1 Score: 599 bits (1545), Expect = 1.160e-208
Identity = 309/537 (57.54%), Postives = 389/537 (72.44%), Query Frame = 1
Query:   13 DKDAATMRVIAELKRLYKTKILPLEQLYKFDIF-NSPHLTDAEFDSKPQVMLLGQYSVGKTTFIRYLLGCDFPGQRIGPEPTTDRFTAIIDGPDERIIPGNALAVSHDMPYRGLERFGVAFLNRFEGAQLPNQVLKNITLIDTPGVLSGEKQRVARGYDFCQVCTWFAARADLILLLFDAHKLDISDEFRNAIDSLKGNDDKIRCILNKADQVDRQRLMRVYGALMWSLGKVVKSPEVLRVYIGSFWDQPLMFDDNATLFEMEEKDLMRDLKDLPRNSAVRKINELVKRVRLAKVHAYIVGYLKEQMPVMMGHAKKQTQLIETLPQVFRTVMKKYNLAPGDFPDITDMQGKLREFDFSKFQVVKQKYIDDAEHVMSTEFPRLMEALPRSLDS-------YAQTAISPSHVPVVFDTVPQAQARVLEEDANPWGDDNDTSGKDSGWALSEYVPQYKPQFDGIA-TNGKVSGGAAKKVLGSSGLPTTALRDIWNLADVDSDGQLDLHEFVIAMFLID-MVKQGHAVPAKLDPEMVPPGK 1593
            D  + T RV A+LK +YK  ILP E+ Y++D F  SP LTD EFD+KPQVML+GQYSVGKT+FIRY+LG DFPG RIGPEPTTDRFT +I+GP+ER IPGNAL+V  D+P+RGLERFGV+FL+RFEG+QLP+ VL+++TL+DTPG+LSGEKQRV RGYDF +V  WFA RADLILLLFDAHKLDISDE ++ ID LKG++DKIRCILNKADQ++RQ+LMRVYGAL+WSLGK + SPEVLRVY+GSFW +PL   DNA LFE EE DLMRDL  LPR SAVRKINELVKR+R  K  AYI+GYLK QMP +MG  KKQ++LI  +P VFRT+MKK+NLAPGDFPDI     KL++  FS+F  +K + I   E  ++   PRLME LP   D+          + +  S V +   T      +     +NP+G   +   +D+ WAL E   + K  F+ +    G +S   AK+VL  +GL    LR IW L+D+D DG  D HE+V+AMFL D ++++G  +PA+L   ++PP K
Sbjct:    7 DAASKTSRVSAQLKSIYKDNILPAEKRYRYDFFYESPFLTDVEFDAKPQVMLVGQYSVGKTSFIRYMLGRDFPGARIGPEPTTDRFTCLINGPEERTIPGNALSVHPDLPFRGLERFGVSFLSRFEGSQLPSSVLRSVTLVDTPGILSGEKQRVNRGYDFTKVVAWFAERADLILLLFDAHKLDISDELKSTIDVLKGHEDKIRCILNKADQINRQQLMRVYGALLWSLGKTINSPEVLRVYVGSFWSEPLQNLDNAELFEQEESDLMRDLAILPRQSAVRKINELVKRIRKVKTLAYIIGYLKAQMPTVMGKEKKQSKLITDMPNVFRTIMKKHNLAPGDFPDINKFSEKLKDTKFSEFASLKVEQIQLLEDCLTGHLPRLMEELPSERDTPETLRAKLTDSGMGSSSVNIPLPTRASKFGKSDAGASNPFGFSEED--EDNYWALEESAERLKNSFEALGPVGGFLSPQTAKEVLVKTGLQKEQLRQIWQLSDIDRDGYFDHHEYVVAMFLCDAVIQKGRPIPAELPASVIPPSK 541          
BLAST of mRNA_D-dudresnayi_contig9336.28129.1 vs. uniprot
Match: B7GAU1_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAU1_PHATC)

HSP 1 Score: 598 bits (1543), Expect = 2.770e-208
Identity = 309/533 (57.97%), Postives = 388/533 (72.80%), Query Frame = 1
Query:   28 TMRVIAELKRLYKTKILPLEQLYKFD-IFNSPHLTDAEFDSKPQVMLLGQYSVGKTTFIRYLLGCDFPGQRIGPEPTTDRFTAIIDGPDERIIPGNALAVSHDMPYRGLERFGVAFLNRFEGAQLPNQVLKNITLIDTPGVLSGEKQRVARGYDFCQVCTWFAARADLILLLFDAHKLDISDEFRNAIDSLKGNDDKIRCILNKADQVDRQRLMRVYGALMWSLGKVVKSPEVLRVYIGSFWDQPLMFDDNATLFEMEEKDLMRDLKDLPRNSAVRKINELVKRVRLAKVHAYIVGYLKEQMPVMMGHAKKQTQLIETLPQVFRTVMKKYNLAPGDFPDITDMQGKLREFDFSKFQVVKQKYIDDAEHVMSTEFPRLMEALPRSLDSY--------AQTAISPSHVPVVFDTVPQAQARVLEEDANPWGDDNDTSGKDSGWALSEYVPQYKPQFDGIATNGK-VSGGAAKKVLGSSGLPTTALRDIWNLADVDSDGQLDLHEFVIAMFLIDMVKQ-GHAVPAKLDPEMVPPGK 1593
            T  V A LK+LYK  + P+E+ Y++D  F SP L+D EFD+KPQV+L+GQYSVGKT+FIRYLLG DFPGQRIGPEPTTDRFT +++GP+ER IPGNAL+V  D+P+RGLERFGV+FL+R EG+QLP+ VLK+ITLIDTPG+LSGEKQR  RGYDF +V +WFA +ADLI+LLFDAHKLDISDE + AID LKG++DKIRCILNKADQ+DRQ+LMRVYGAL+WSLGK + SPEV RVY+GSFW QPL   DNA LFEMEEKDLM+DL  LPR SAVRKINELVKR+R  K  AYI+GYLK QMP +MG  KKQ +LI  LP VFRT+MKKY+LAPGDFP+I     KL E  F++F  + +K I D + V++ + P+LME LP   DS         A   I+   VPV  +   + +      ++NP+G D +    +  WAL +   +  P F+ +  +G  +S   A+ VL  +GL    LR IWNL+D+D DG  D  E+V+AMFL D V Q G  +P++L   ++PP K
Sbjct:   22 TAIVAARLKKLYKNSVYPVEKKYRYDYFFESPLLSDVEFDAKPQVLLVGQYSVGKTSFIRYLLGRDFPGQRIGPEPTTDRFTVLLNGPEERTIPGNALSVHPDLPFRGLERFGVSFLSRLEGSQLPSSVLKSITLIDTPGILSGEKQRTNRGYDFTKVVSWFAEKADLIILLFDAHKLDISDELKGAIDVLKGHEDKIRCILNKADQIDRQQLMRVYGALLWSLGKTMTSPEVARVYVGSFWQQPLQHMDNADLFEMEEKDLMKDLAVLPRQSAVRKINELVKRIRKVKTLAYIIGYLKSQMPALMGKEKKQKKLIADLPTVFRTIMKKYDLAPGDFPEIASFSNKLHETKFAEFNTLSEKQIADLDRVLNEDIPKLMEELPSEKDSPDIIRSKMGAAGGIAKVPVPVANNKFGKKETA---HESNPFGYDEEN---EDYWALQDSADRLLPSFEALGPDGGYLSTAKARDVLVKTGLEKDQLRQIWNLSDIDKDGLFDHDEYVVAMFLCDAVLQKGRPIPSELPASVIPPRK 548          
BLAST of mRNA_D-dudresnayi_contig9336.28129.1 vs. uniprot
Match: A0A7S4JNC5_9STRA (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S4JNC5_9STRA)

HSP 1 Score: 599 bits (1544), Expect = 4.810e-208
Identity = 312/538 (57.99%), Postives = 394/538 (73.23%), Query Frame = 1
Query:   28 TMRVIAELKRLYKTKILPLEQLYKFDIF-NSPHLTDAEFDSKPQVMLLGQYSVGKTTFIRYLLGCDFPGQRIGPEPTTDRFTAIIDGPDERIIPGNALAVSHDMPYRGLERFGVAFLNRFEGAQLPNQVLKNITLIDTPGVLSGEKQRVARGYDFCQVCTWFAARADLILLLFDAHKLDISDEFRNAIDSLKGNDDKIRCILNKADQVDRQRLMRVYGALMWSLGKVVKSPEVLRVYIGSFWDQPLMFDDNATLFEMEEKDLMRDLKDLPRNSAVRKINELVKRVRLAKVHAYIVGYLKEQMPVMMGHAKKQTQLIETLPQVFRTVMKKYNLAPGDFPDITDMQGKLREFDFSKFQVVKQKYIDDAEHVMSTEFPRLMEALPRSLD----------SYAQTAISPSHVPVVFDTVPQAQARVLEED---ANPWGDDNDTSGKDSGWALSEYVPQYKPQFDGIATNGK-VSGGAAKKVLGSSGLPTTALRDIWNLADVDSDGQLDLHEFVIAMFLID-MVKQGHAVPAKLDPEMVPPGK 1593
            T  + A LK++YK  + P+E+ +++D F  SP LTD EFDSKPQ+ML+GQYSVGKT+FIRYLLG DFPGQRIGPEPTTDRFT +I+GP+ER IPGNAL+V  D+P+RGLERFGV+FL+RFEG+QLP+ VLK++TLIDTPG+LSGEKQR  RGYDF +V +WFA RADLI+LLFDAHKLDISDE + AID LKG++DKIRCILNKADQ+DRQ+LMRVYGAL+WSLGK + SPEV RVY+GSFW +PL   DNA LFE EE+DLMRDL  LPR SAVRKINELVKR+R  K  AYI+GYLK QMP +MG  KKQ +LI  LP VFRT+MKKYNLAPGDFPDI     KL+E  FS+F  ++Q  I+  +  ++ + P+LME LP   D          S AQ+  S ++VP+     P    +  ++D   ANP+G   D   +D+ WAL++   + +  F+ +   G  +S   A+ VL  +GL    LR IWNL+D+D DG  D  E+V+AMFL D ++++G  +P  L P +VPP K
Sbjct:   45 TAMLSARLKQIYKKAVYPVEKRHRYDYFYESPFLTDVEFDSKPQIMLIGQYSVGKTSFIRYLLGRDFPGQRIGPEPTTDRFTVLINGPEERTIPGNALSVHPDLPFRGLERFGVSFLSRFEGSQLPSSVLKSVTLIDTPGILSGEKQRTNRGYDFTKVVSWFADRADLIILLFDAHKLDISDELKGAIDVLKGHEDKIRCILNKADQIDRQQLMRVYGALLWSLGKTMSSPEVARVYVGSFWQEPLKNLDNAELFEDEERDLMRDLAILPRQSAVRKINELVKRIRKVKTLAYIIGYLKSQMPNIMGKEKKQQKLINDLPNVFRTIMKKYNLAPGDFPDIASFTAKLKEVKFSEFHSLQQSQIEALDLTLNVDIPKLMEQLPSEKDTPESLRAKMGSAAQSNPSAANVPL-----PTRAEKFGKKDTHAANPFGAGADD--EDNYWALADSADRLRDSFEALGPEGGFLSPQTARDVLVKTGLGKDELRKIWNLSDIDRDGYFDHEEYVVAMFLCDAVIQKGRPIPESLPPSVVPPSK 575          
BLAST of mRNA_D-dudresnayi_contig9336.28129.1 vs. uniprot
Match: A0A7S2R558_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R558_9STRA)

HSP 1 Score: 596 bits (1536), Expect = 5.180e-207
Identity = 306/540 (56.67%), Postives = 394/540 (72.96%), Query Frame = 1
Query:   13 DKDAATMRVIAELKRLYKTKILPLEQLYKFDIF-NSPHLTDAEFDSKPQVMLLGQYSVGKTTFIRYLLGCDFPGQRIGPEPTTDRFTAIIDGPDERIIPGNALAVSHDMPYRGLERFGVAFLNRFEGAQLPNQVLKNITLIDTPGVLSGEKQRVARGYDFCQVCTWFAARADLILLLFDAHKLDISDEFRNAIDSLKGNDDKIRCILNKADQVDRQRLMRVYGALMWSLGKVVKSPEVLRVYIGSFWDQPLMFDDNATLFEMEEKDLMRDLKDLPRNSAVRKINELVKRVRLAKVHAYIVGYLKEQMPVMMGHAKKQTQLIETLPQVFRTVMKKYNLAPGDFPDITDMQGKLREFDFSKFQVVKQKYIDDAEHVMSTEFPRLMEALPRSLD----------SYAQTAISPSHVPVVFDTVPQAQARVLEEDANPWGDDNDTSGKDSGWALSEYVPQYKPQFDGIATNGK-VSGGAAKKVLGSSGLPTTALRDIWNLADVDSDGQLDLHEFVIAMFLID-MVKQGHAVPAKLDPEMVPPGK 1593
            D    T  V + LK +Y+  + P+E+ +++D F  SP LTD EFDSKPQVML+GQYSVGKT+FI+YLLG DFPGQRIGPEPTTDRFT +++GP+ER IPGNAL+V  D+P+RGLERFGV+FLNRFEG+QLP+ VL+++TL+DTPG+LSGEKQR  RGYDF +V +WFA RADLI+LLFDAHKLDISDE +  +D++ G++DKIRCILNKADQ+DRQ+LMRVYGAL+WSLGK + SPEV+RVY+GSFW +PL   DNA LFE EEKDLMRDL  LPR SAVRKINELVKR+R  K  AY++GYLK QMP +MG  KKQ +LI  LP VFRT+MKKYNL+ GDFP+I     KL+E  FS+F  ++Q  ID  E  ++ + P+LME LP   D          S A    + ++VPV    V  A+    EE++NP+G       +D+ WAL +   +    F+ +   G  ++ G A+ VL  +GL    LR IWNL+D+D DG LD HE+V+AMFL D ++++G  +P++L P +VPP K
Sbjct:   26 DLGERTALVSSRLKSIYRKAVFPVEKRFRYDFFYESPFLTDVEFDSKPQVMLVGQYSVGKTSFIKYLLGRDFPGQRIGPEPTTDRFTVLLNGPEERTIPGNALSVHADLPFRGLERFGVSFLNRFEGSQLPSSVLRSVTLVDTPGILSGEKQRNNRGYDFTKVVSWFAERADLIILLFDAHKLDISDELKGTMDAIAGHEDKIRCILNKADQIDRQQLMRVYGALLWSLGKTMTSPEVVRVYVGSFWQEPLKNLDNAELFEQEEKDLMRDLAILPRQSAVRKINELVKRIRKVKTLAYVIGYLKSQMPNVMGKEKKQQKLINDLPNVFRTIMKKYNLSAGDFPEIQTFSQKLKEVKFSEFSSLQQTQIDALEKCLTVDIPKLMEELPSERDTPETLRKKMGSVASRNPTATNVPV---PVSGAKFGKKEENSNPFG--FAAEDEDNYWALQDSAERLYDSFEALGPEGGFLTPGTARSVLLKTGLQKEQLRQIWNLSDIDRDGFLDHHEYVVAMFLCDAVIQKGRPIPSELPPSVVPPSK 560          
BLAST of mRNA_D-dudresnayi_contig9336.28129.1 vs. uniprot
Match: A0A1E7F526_9STRA (Putative EH-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F526_9STRA)

HSP 1 Score: 593 bits (1529), Expect = 4.850e-206
Identity = 302/533 (56.66%), Postives = 395/533 (74.11%), Query Frame = 1
Query:   28 TMRVIAELKRLYKTKILPLEQLYKFDIF-NSPHLTDAEFDSKPQVMLLGQYSVGKTTFIRYLLGCDFPGQRIGPEPTTDRFTAIIDGPDERIIPGNALAVSHDMPYRGLERFGVAFLNRFEGAQLPNQVLKNITLIDTPGVLSGEKQRVARGYDFCQVCTWFAARADLILLLFDAHKLDISDEFRNAIDSLKGNDDKIRCILNKADQVDRQRLMRVYGALMWSLGKVVKSPEVLRVYIGSFWDQPLMFDDNATLFEMEEKDLMRDLKDLPRNSAVRKINELVKRVRLAKVHAYIVGYLKEQMPVMMGHAKKQTQLIETLPQVFRTVMKKYNLAPGDFPDITDMQGKLREFDFSKFQVVKQKYIDDAEHVMSTEFPRLMEALPRSLDS----YAQTAISPSH-VPVVFDTVPQAQARVLEED---ANPWGDDNDTSGKDSGWALSEYVPQYKPQFDGIATNGKVSGGA-AKKVLGSSGLPTTALRDIWNLADVDSDGQLDLHEFVIAMFLID-MVKQGHAVPAKLDPEMVPPGK 1593
            T  +   LK +Y+  +LP+E+ +K+D F  SP ++DAEFD+KPQVML+GQYSVGKT+FIRYLLG DFPGQRIGPEPTTDRFT +I+GP+ER+IPGNAL+V  D+P+RGLERFGV+FL+RFEG+Q+P+ VL+++TL+DTPG+LSGEKQR  RGYDF +V  WFA RADLIL+LFDAHKLDISDE + AIDSLKGN+DK+RC+LNKADQ+DRQ+LMRVYGAL+WSLGK + SPEV RVY+GSFW +PL   DN  LFE EE+DLM+DL  LPR SAVRKINELVKR+R  K  AYI+ +LK QMP +MG  KKQ +LI  LP VFR+++KK+ LAPGDFPDIT    KLR+  F++F  + QK ID  + +++ + P LME LP   DS     A+     S  VP +   VP+  A+  +++   +NP+G D++   KD+ WAL +   + +  F+ +   G     A A+ VL  +GL    LR IWNL+D+D DG  DL E+V+AMFL D ++++G  +PA+L   ++PP K
Sbjct:   32 TSIITGRLKTIYRKSVLPVEKRFKYDYFYESPFMSDAEFDAKPQVMLIGQYSVGKTSFIRYLLGRDFPGQRIGPEPTTDRFTVLINGPEERVIPGNALSVHPDLPFRGLERFGVSFLSRFEGSQMPSSVLRSVTLVDTPGILSGEKQRTNRGYDFNKVTGWFAERADLILVLFDAHKLDISDELKGAIDSLKGNEDKVRCVLNKADQIDRQQLMRVYGALLWSLGKTMTSPEVARVYVGSFWQEPLKSLDNVDLFEKEEQDLMKDLAVLPRQSAVRKINELVKRIRKVKTLAYIIAHLKAQMPTLMGKEKKQNKLIADLPNVFRSILKKHGLAPGDFPDITSFSTKLRDVKFAEFHTLSQKQIDGLDDILNKDIPALMEELPSERDSPETLRAKMGGGASRGVPNI--PVPKTAAKYGKQEQFKSNPFGPDSED--KDNYWALQDSADRLRGSFEALGPEGGFLPTAKARSVLVKTGLEKDNLRQIWNLSDIDKDGLFDLDEYVVAMFLCDAVIQKGRPIPAELPASVIPPSK 560          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9336.28129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3HF70_9STRA0.000e+088.22Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
D7G401_ECTSI1.350e-21555.46RME1, RME-1/EHD family ATPase with a C-terminal EH... [more]
A0A835YYV9_9STRA3.850e-21556.08RME1, RME-1/EHD family ATPase with a C-terminal EH... [more]
A0A7S2N1J3_9STRA1.690e-21159.15Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S0Y574_9STRA7.310e-21157.84Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
B8CBW3_THAPS1.160e-20857.54Receptor mediated endocytosis protein-like protein... [more]
B7GAU1_PHATC2.770e-20857.97Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S4JNC5_9STRA4.810e-20857.99Hypothetical protein n=2 Tax=Eupodiscales TaxID=33... [more]
A0A7S2R558_9STRA5.180e-20756.67Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A1E7F526_9STRA4.850e-20656.66Putative EH-domain-containing protein n=1 Tax=Frag... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9336contigD-dudresnayi_contig9336:1528..3763 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score622.9
Seed ortholog evalue1.4e-175
Seed eggNOG ortholog2880.D7G401
KEGG koko:K12483
KEGG Pathwayko04144,map04144
EggNOG free text desc.endocytic recycling
EggNOG OGsKOG1954@1,KOG1954@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Exons5
Model size1596
Cds size1596
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9336.28129.1prot_D-dudresnayi_contig9336.28129.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9336 1528..3763 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930872.9409778-CDS-D-dudresnayi_contig9336:1527..21571622930872.9409778-CDS-D-dudresnayi_contig9336:1527..2157Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9336 1528..2157 -
1690557947.9378688-CDS-D-dudresnayi_contig9336:1527..21571690557947.9378688-CDS-D-dudresnayi_contig9336:1527..2157Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9336 1528..2157 -
1622930872.9698915-CDS-D-dudresnayi_contig9336:2349..24731622930872.9698915-CDS-D-dudresnayi_contig9336:2349..2473Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9336 2350..2473 -
1690557947.9498477-CDS-D-dudresnayi_contig9336:2349..24731690557947.9498477-CDS-D-dudresnayi_contig9336:2349..2473Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9336 2350..2473 -
1622930873.0062757-CDS-D-dudresnayi_contig9336:2707..27711622930873.0062757-CDS-D-dudresnayi_contig9336:2707..2771Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9336 2708..2771 -
1690557947.9593687-CDS-D-dudresnayi_contig9336:2707..27711690557947.9593687-CDS-D-dudresnayi_contig9336:2707..2771Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9336 2708..2771 -
1622930873.0262136-CDS-D-dudresnayi_contig9336:2885..30431622930873.0262136-CDS-D-dudresnayi_contig9336:2885..3043Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9336 2886..3043 -
1690557947.9681094-CDS-D-dudresnayi_contig9336:2885..30431690557947.9681094-CDS-D-dudresnayi_contig9336:2885..3043Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9336 2886..3043 -
1622930873.0489397-CDS-D-dudresnayi_contig9336:3143..37631622930873.0489397-CDS-D-dudresnayi_contig9336:3143..3763Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9336 3144..3763 -
1690557947.9766254-CDS-D-dudresnayi_contig9336:3143..37631690557947.9766254-CDS-D-dudresnayi_contig9336:3143..3763Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9336 3144..3763 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9336.28129.1

>prot_D-dudresnayi_contig9336.28129.1 ID=prot_D-dudresnayi_contig9336.28129.1|Name=mRNA_D-dudresnayi_contig9336.28129.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=532bp
MASFDKDAATMRVIAELKRLYKTKILPLEQLYKFDIFNSPHLTDAEFDSK
PQVMLLGQYSVGKTTFIRYLLGCDFPGQRIGPEPTTDRFTAIIDGPDERI
IPGNALAVSHDMPYRGLERFGVAFLNRFEGAQLPNQVLKNITLIDTPGVL
SGEKQRVARGYDFCQVCTWFAARADLILLLFDAHKLDISDEFRNAIDSLK
GNDDKIRCILNKADQVDRQRLMRVYGALMWSLGKVVKSPEVLRVYIGSFW
DQPLMFDDNATLFEMEEKDLMRDLKDLPRNSAVRKINELVKRVRLAKVHA
YIVGYLKEQMPVMMGHAKKQTQLIETLPQVFRTVMKKYNLAPGDFPDITD
MQGKLREFDFSKFQVVKQKYIDDAEHVMSTEFPRLMEALPRSLDSYAQTA
ISPSHVPVVFDTVPQAQARVLEEDANPWGDDNDTSGKDSGWALSEYVPQY
KPQFDGIATNGKVSGGAAKKVLGSSGLPTTALRDIWNLADVDSDGQLDLH
EFVIAMFLIDMVKQGHAVPAKLDPEMVPPGK*
back to top

mRNA from alignment at D-dudresnayi_contig9336:1528..3763-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9336.28129.1 ID=mRNA_D-dudresnayi_contig9336.28129.1|Name=mRNA_D-dudresnayi_contig9336.28129.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=2236bp|location=Sequence derived from alignment at D-dudresnayi_contig9336:1528..3763- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGCTTCATTTGACAAAGATGCTGCAACCATGCGAGTAATCGCAGAGTT AAAACGGCTTTATAAGACCAAAATATTGCCTCTCGAACAACTGTATAAAT TTGATATTTTCAATTCCCCTCATCTTACTGATGCAGAATTTGACTCCAAA CCTCAAGTTATGCTTCTTGGTCAATACTCTGTTGGAAAAACAACTTTTAT TAGATATCTTTTAGGATGTGATTTCCCTGGTCAGCGAATTGGCCCGGAAC CAACAACTGATCGGTTCACTGCAATTATCGATGGTCCTGATGAGAGAATT ATTCCAGGAAATGCTCTTGCTGTTTCTCATGATATGCCTTATCGTGGATT GGAACGTTTTGGTGTAGCATTTTTGAATCGTTTTGAAGGTGCACAACTTC CTAACCAGGTACTCAAGAACATCACTCTCATCGATACTCCTGGTGTACTT AGTGGTGAAAAACAACGAGTCGCTAGAGGATACGATTTCTGTCAAGTTTG TACTTGGTTTGCTGCTCGTGCAGATCTCATTCTTCTTCTATTTGATGCCC ACAAGTTGGATATCTCCGATGAGTTTAGAAACGCCATTGATAGTTTGAAA GGCAACGATGATAAAATCCGGTAAGATATCTATTCAAAACTATTCACTAT TTCAAATTTCTGATTGCTTTTAATTTCTCCTATTTATATTCATATATATT GTTGTTATTGTATTTAATAGTTGTATTTTAAACAAAGCCGATCAAGTCGA TCGACAGCGTCTGATGCGAGTGTATGGTGCTTTAATGTGGAGTCTGGGTA AAGTCGTGAAATCCCCTGAAGTACTGAGGGTTTATATCGGATCTTTCTGG GATCAACCTCTAATGTTTGATGATAATGGTAAGGAATTTGTTCGTCTTTT GATTAATTTTATATTCAGATGTATTGTTCTACTACGGTAACTTATTGCTC TTATAATTATATTGCTGTATATGATTGATTGCCTATCGGTAGCTACTTTA TTCGAGATGGAGGAGAAGGACCTGATGAGAGACCTCAAGGACCTCCCTCG CAACAGGTAATCCACCCCCTATCCCTACTCTTATTCTTCCTAGTACAGAA TTATATAATAATAACCAAGGTGTTTTCCCATGGGGTTTTAAGAAAATAAC AACGAGTATTTTTGTATAACCCATGGAAATACACTGGTATTTTATAATAC ATCTGTTATTTACATTGAAACTCTTTTTGTTTAAGCTAAGCCACTAACCA GAAACCTTCTTCTACTATCGGTACCGTACTTGTCTGACAGTGCCGTACGC AAGATCAATGAGCTAGTGAAGCGAGTGCGCCTGGCCAAGGTACATGCATA CATTGTGGGCTACCTGAAGGAGCAAATGCCGGTCATGATGGGCCACGCCA AGAAGCAGACACAGGTGAGAACTGGCTGTATTACTACTACTACTACTACT GTACTACTACTACCGTGCTACTACTACTACTGTACTACAACATTACTAGA CTATGATTACAATCTATTGAATTCATTTATTCTTATATACAGCATTACAC TATCATTTTGATCTAAATTTTATTAATTTCTCAATATTTACCCTATAAAA TAACAGTTAATCGAAACACTTCCTCAAGTATTCCGTACAGTAATGAAGAA ATACAACCTTGCCCCTGGTGACTTCCCAGATATCACTGATATGCAAGGAA AACTTCGTGAATTTGATTTCAGTAAGTTTCAAGTTGTCAAGCAGAAGTAT ATTGATGACGCTGAACATGTGATGAGTACTGAGTTCCCACGCCTAATGGA AGCACTCCCACGATCTTTAGATTCTTATGCACAAACTGCTATTTCACCCA GTCATGTTCCTGTGGTTTTTGATACAGTACCACAGGCACAAGCAAGGGTT TTAGAAGAAGATGCCAATCCATGGGGGGATGATAATGATACTTCTGGGAA AGATAGTGGTTGGGCATTGAGTGAATATGTTCCTCAATATAAACCTCAAT TCGATGGGATTGCAACGAATGGCAAGGTATCTGGTGGTGCTGCGAAGAAG GTACTGGGTAGCTCCGGATTACCGACTACTGCACTGAGAGATATTTGGAA CCTTGCTGATGTTGACAGTGATGGTCAGCTTGACCTGCATGAGTTTGTTA TCGCTATGTTCCTGATCGATATGGTCAAGCAGGGACATGCGGTGCCTGCG AAGCTTGATCCGGAGATGGTTCCACCGGGCAAGTAG
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig9336:1528..3763-

>mRNA_D-dudresnayi_contig9336.28129.1 ID=mRNA_D-dudresnayi_contig9336.28129.1|Name=mRNA_D-dudresnayi_contig9336.28129.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=3192bp|location=Sequence derived from alignment at D-dudresnayi_contig9336:1528..3763- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGCTTCATTTGACAAAGATGCTGCAACCATGCGAGTAATCGCAGAGTT
AAAACGGCTTTATAAGACCAAAATATTGCCTCTCGAACAACTGTATAAAT
TTGATATTTTCAATTCCCCTCATCTTACTGATGCAGAATTTGACTCCAAA
CCTCAAGTTATGCTTCTTGGTCAATACTCTGTTGGAAAAACAACTTTTAT
TAGATATCTTTTAGGATGTGATTTCCCTGGTCAGCGAATTGGCCCGGAAC
CAACAACTGATCGGTTCACTGCAATTATCGATGGTCCTGATGAGAGAATT
ATTCCAGGAAATGCTCTTGCTGTTTCTCATGATATGCCTTATCGTGGATT
GGAACGTTTTGGTGTAGCATTTTTGAATCGTTTTGAAGGTGCACAACTTC
CTAACCAGGTACTCAAGAACATCACTCTCATCGATACTCCTGGTGTACTT
AGTGGTGAAAAACAACGAGTCGCTAGAGGATACGATTTCTGTCAAGTTTG
TACTTGGTTTGCTGCTCGTGCAGATCTCATTCTTCTTCTATTTGATGCCC
ACAAGTTGGATATCTCCGATGAGTTTAGAAACGCCATTGATAGTTTGAAA
GGCAACGATGATAAAATCCGATGGCTTCATTTGACAAAGATGCTGCAACC
ATGCGAGTAATCGCAGAGTTAAAACGGCTTTATAAGACCAAAATATTGCC
TCTCGAACAACTGTATAAATTTGATATTTTCAATTCCCCTCATCTTACTG
ATGCAGAATTTGACTCCAAACCTCAAGTTATGCTTCTTGGTCAATACTCT
GTTGGAAAAACAACTTTTATTAGATATCTTTTAGGATGTGATTTCCCTGG
TCAGCGAATTGGCCCGGAACCAACAACTGATCGGTTCACTGCAATTATCG
ATGGTCCTGATGAGAGAATTATTCCAGGAAATGCTCTTGCTGTTTCTCAT
GATATGCCTTATCGTGGATTGGAACGTTTTGGTGTAGCATTTTTGAATCG
TTTTGAAGGTGCACAACTTCCTAACCAGGTACTCAAGAACATCACTCTCA
TCGATACTCCTGGTGTACTTAGTGGTGAAAAACAACGAGTCGCTAGAGGA
TACGATTTCTGTCAAGTTTGTACTTGGTTTGCTGCTCGTGCAGATCTCAT
TCTTCTTCTATTTGATGCCCACAAGTTGGATATCTCCGATGAGTTTAGAA
ACGCCATTGATAGTTTGAAAGGCAACGATGATAAAATCCGTTGTATTTTA
AACAAAGCCGATCAAGTCGATCGACAGCGTCTGATGCGAGTGTATGGTGC
TTTAATGTGGAGTCTGGGTAAAGTCGTGAAATCCCCTGAAGTACTGAGGG
TTTATATCGGATCTTTCTGGGATCAACCTCTAATGTTTGATGATAATGTT
GTATTTTAAACAAAGCCGATCAAGTCGATCGACAGCGTCTGATGCGAGTG
TATGGTGCTTTAATGTGGAGTCTGGGTAAAGTCGTGAAATCCCCTGAAGT
ACTGAGGGTTTATATCGGATCTTTCTGGGATCAACCTCTAATGTTTGATG
ATAATGCTACTTTATTCGAGATGGAGGAGAAGGACCTGATGAGAGACCTC
AAGGACCTCCCTCGCAACAGCTACTTTATTCGAGATGGAGGAGAAGGACC
TGATGAGAGACCTCAAGGACCTCCCTCGCAACAGTGCCGTACGCAAGATC
AATGAGCTAGTGAAGCGAGTGCGCCTGGCCAAGGTACATGCATACATTGT
GGGCTACCTGAAGGAGCAAATGCCGGTCATGATGGGCCACGCCAAGAAGC
AGACACAGTGCCGTACGCAAGATCAATGAGCTAGTGAAGCGAGTGCGCCT
GGCCAAGGTACATGCATACATTGTGGGCTACCTGAAGGAGCAAATGCCGG
TCATGATGGGCCACGCCAAGAAGCAGACACAGTTAATCGAAACACTTCCT
CAAGTATTCCGTACAGTAATGAAGAAATACAACCTTGCCCCTGGTGACTT
CCCAGATATCACTGATATGCAAGGAAAACTTCGTGAATTTGATTTCAGTA
AGTTTCAAGTTGTCAAGCAGAAGTATATTGATGACGCTGAACATGTGATG
AGTACTGAGTTCCCACGCCTAATGGAAGCACTCCCACGATCTTTAGATTC
TTATGCACAAACTGCTATTTCACCCAGTCATGTTCCTGTGGTTTTTGATA
CAGTACCACAGGCACAAGCAAGGGTTTTAGAAGAAGATGCCAATCCATGG
GGGGATGATAATGATACTTCTGGGAAAGATAGTGGTTGGGCATTGAGTGA
ATATGTTCCTCAATATAAACCTCAATTCGATGGGATTGCAACGAATGGCA
AGGTATCTGGTGGTGCTGCGAAGAAGGTACTGGGTAGCTCCGGATTACCG
ACTACTGCACTGAGAGATATTTGGAACCTTGCTGATGTTGACAGTGATGG
TCAGCTTGACCTGCATGAGTTTGTTATCGCTATGTTCCTGATCGATATGG
TCAAGCAGGGACATGCGGTGCCTGCGAAGCTTGATCCGGAGATGGTTCCA
CCGGGCAAGTAGTTAATCGAAACACTTCCTCAAGTATTCCGTACAGTAAT
GAAGAAATACAACCTTGCCCCTGGTGACTTCCCAGATATCACTGATATGC
AAGGAAAACTTCGTGAATTTGATTTCAGTAAGTTTCAAGTTGTCAAGCAG
AAGTATATTGATGACGCTGAACATGTGATGAGTACTGAGTTCCCACGCCT
AATGGAAGCACTCCCACGATCTTTAGATTCTTATGCACAAACTGCTATTT
CACCCAGTCATGTTCCTGTGGTTTTTGATACAGTACCACAGGCACAAGCA
AGGGTTTTAGAAGAAGATGCCAATCCATGGGGGGATGATAATGATACTTC
TGGGAAAGATAGTGGTTGGGCATTGAGTGAATATGTTCCTCAATATAAAC
CTCAATTCGATGGGATTGCAACGAATGGCAAGGTATCTGGTGGTGCTGCG
AAGAAGGTACTGGGTAGCTCCGGATTACCGACTACTGCACTGAGAGATAT
TTGGAACCTTGCTGATGTTGACAGTGATGGTCAGCTTGACCTGCATGAGT
TTGTTATCGCTATGTTCCTGATCGATATGGTCAAGCAGGGACATGCGGTG
CCTGCGAAGCTTGATCCGGAGATGGTTCCACCGGGCAAGTAG
back to top