mRNA_D-dudresnayi_contig9319.28116.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9319.28116.1
Unique NamemRNA_D-dudresnayi_contig9319.28116.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
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BLAST of mRNA_D-dudresnayi_contig9319.28116.1 vs. uniprot
Match: A0A6H5JFY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFY6_9PHAE)

HSP 1 Score: 318 bits (814), Expect = 1.620e-101
Identity = 151/187 (80.75%), Postives = 167/187 (89.30%), Query Frame = 1 
Query:  265 RSHTFRNLRRGQRINSFPRSYECTRKDALLRNMNRMSQVHGIRHFGFAPRGFVLPSEREAVREAMLDAPEGEAWIVKPASSACGRGIFITNTFADMPGESGKSTEGNWIAQRYVDDPLLLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATEPYSEDAGSFGNRFVHLTNYSINRRSSRYEPGTT 825
            RSH FRNL+RGQRINSFPR+YECTRKDAL RNMNRMS+VHG RHF FAPRGFVLP+EREA+REAML+  EGEAWIVKPA+SACGRGI+IT  FADMP   G   +GNWIAQ+YV+DP+LLDGLKFDLRLYVAVTSFRPLRVYLH+EGLCRLATE Y  DA SFGN+F+HLTNYSINRRS+RYE G T
Sbjct:  174 RSHVFRNLKRGQRINSFPRTYECTRKDALSRNMNRMSEVHGARHFSFAPRGFVLPAEREALREAMLNTSEGEAWIVKPANSACGRGIYITKNFADMP--VGTGADGNWIAQQYVEDPMLLDGLKFDLRLYVAVTSFRPLRVYLHDEGLCRLATETYRPDAPSFGNKFIHLTNYSINRRSNRYEHGKT 358
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BLAST of mRNA_D-dudresnayi_contig9319.28116.1 vs. uniprot
Match: D8LTG1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTG1_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 1.020e-99
Identity = 153/187 (81.82%), Postives = 166/187 (88.77%), Query Frame = 1 
Query:  265 RSHTFRNLRRGQRINSFPRSYECTRKDALLRNMNRMSQVHGIRHFGFAPRGFVLPSEREAVREAMLDAPEGEAWIVKPASSACGRGIFITNTFADMPGESGKSTEGNWIAQRYVDDPLLLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATEPYSEDAGSFGNRFVHLTNYSINRRSSRYEPGTT 825
            RSH FRNL+RGQRINSFPR+YECTRKDAL RNMNRMS+VHG RHF FAPRGFVLP+EREA+REAML+  EGE WIVKPASSACGRGI+IT  FADMP   G   +GNWIAQRYV+DP+LLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATE Y  DA SFGN+F+HLTNYSINRRS+RYE G T
Sbjct:  159 RSHVFRNLKRGQRINSFPRTYECTRKDALSRNMNRMSEVHGARHFSFAPRGFVLPAEREALREAMLNTSEGETWIVKPASSACGRGIYITKNFADMP--VGTGPDGNWIAQRYVEDPMLLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATETYRPDAPSFGNKFIHLTNYSINRRSNRYEHGIT 343
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BLAST of mRNA_D-dudresnayi_contig9319.28116.1 vs. uniprot
Match: A0A7S1CKS8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CKS8_9STRA)

HSP 1 Score: 239 bits (611), Expect = 1.030e-70
Identity = 129/262 (49.24%), Postives = 164/262 (62.60%), Query Frame = 1 
Query:   37 HVARCMCELCRRQRSRRVPGPPARPTFKVVGVEPRLVTATLQAHGFRRRRQARRRGGRGWTGDGTGWRVLWSSQHLRSHTFRNLRRGQRINSFPRSYECTRKDALLRNMNRMSQVHGIRHFGFAPRGFVLPSEREAVREAMLDAPEGEAWIVKPASSACGRGIFITNTFADMPGESGKSTEGNWIAQRYVDDPLLLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATEPYSEDAGSFGNRFVHLTNYSINRRSSRYEPGT 822
            HV+ C C  CR++   R+ GP  R T+K+      LV A  ++HGFR+  +              GW  LW+S HL+S+ F+ L R Q++N FPRSYE TRKD L RNM RM Q+HG RHF F P+ FVLP++    R A   A  G  WIVKP++SA GRGIF+T  + D+  E     E      RY+D+PLLLDG KFDLRLYVAVTSF PLR+Y+HEEGL R AT+PY  D   + N F+HLTNYSIN+ S ++   T
Sbjct:   14 HVSTCTCPACRKRVRSRLTGP-LRLTYKMNHSGVGLVHAIFRSHGFRQTTK-------------DGWNALWTSAHLKSYVFQGLNRYQKVNQFPRSYEVTRKDNLARNMRRMEQMHGERHFEFMPKSFVLPADIAEFR-AEWAAQRGSPWIVKPSASARGRGIFLTRDW-DVATER---FEDGCTVSRYIDNPLLLDGYKFDLRLYVAVTSFHPLRIYVHEEGLARFATDPYDPDPRHYENHFMHLTNYSINKHSKKFVANT 256
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BLAST of mRNA_D-dudresnayi_contig9319.28116.1 vs. uniprot
Match: A0A7S3XKD1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKD1_HETAK)

HSP 1 Score: 215 bits (548), Expect = 7.180e-64
Identity = 102/180 (56.67%), Postives = 128/180 (71.11%), Query Frame = 1 
Query:  262 LRSHTFRNLRRGQRINSFPRSYECTRKDALLRNMNRMSQVHGIRHFGFAPRGFVLPSEREAVREAMLDAPEGEAWIVKPASSACGRGIFITNTFADMPGESGKSTEGNWIAQRYVDDPLLLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATEPYSEDAGSFGNRFVHLTNYSINRRS 801
            L+++ F+  R  QR+N FPR++E TRKDAL  N+NRM ++HG R F F P  FVLP EREA+ EAM        WIVKPA SACGRGI++    + MP    +  EGNWI   Y+D PLL+DG KFDLR+YVAVTSF PLR+Y+HEEGLCRLA+  YS D     +RF+HLTNYSIN+++
Sbjct:    1 LKAYAFKAFRPWQRVNQFPRTWELTRKDALAHNLNRMREIHGDRSFSFMPLCFVLPKEREALAEAMRKRQR--TWIVKPAGSACGRGIYLATKLSQMP----EMKEGNWIVSEYIDRPLLIDGFKFDLRIYVAVTSFHPLRIYVHEEGLCRLASRQYSNDPSLVRDRFIHLTNYSINKKN 174
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BLAST of mRNA_D-dudresnayi_contig9319.28116.1 vs. uniprot
Match: A0A2R5GCY3_9STRA (Tubulin polyglutamylase TTLL5 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCY3_9STRA)

HSP 1 Score: 221 bits (562), Expect = 1.550e-63
Identity = 122/276 (44.20%), Postives = 168/276 (60.87%), Query Frame = 1 
Query:   28 TLYHVARCMCELCRRQRSRRVPGPPARPTFKVVGVEPRLVTATLQAHGFRRRRQARRRGGRGWTGDGTGWRVLWSSQHLRSHTFRNLRRGQRINSFPRSYECTRKDALLRNMNRMSQVHGIRHFGFAPRGFVLPSEREAVREAMLDA------------PEGEA---WIVKPASSACGRGIFITNTFADMPGESGKSTEGNWIAQRYVDDPLLLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATEPYSEDAGSFGNRFVHLTNYSINRRSSRY 810
            T  HV+ C C  C + + R     P +  +K  G+  RL+ ATL++  F +  +               W VLW S  LR H +++L R Q++N FPR+YE TRKD L RNM RM ++HG RHF F P+ FVLP++R   +    D+            P+ E    WIVKPA+SACGRGI++T+  A++P   G+  +GN +  RY+ +PLLLD  KFDLR+YVAVTSF PLRVY+++EGL RL TE Y  DA S  NR+VHLTNYS+ ++S ++
Sbjct:  125 TRSHVSSCTCAQCVKAK-RAARNAPIQLRYKA-GI--RLIEATLESSKFVKTTK-------------DDWNVLWVSGALRPHIYQSLLRHQKVNQFPRTYEITRKDQLCRNMRRMQELHGKRHFDFFPQSFVLPADRSEFQRMAKDSLQRQQPPATSSRPDEETPELWIVKPAASACGRGIYLTDNLAEIPLSGGE--DGNVLVSRYIANPLLLDQRKFDLRIYVAVTSFDPLRVYIYQEGLVRLTTEEYRNDAESLKNRYVHLTNYSVQKKSKKF 381
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BLAST of mRNA_D-dudresnayi_contig9319.28116.1 vs. uniprot
Match: A0A6P8RQ11_GEOSA (tubulin polyglutamylase TTLL5 isoform X1 n=4 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8RQ11_GEOSA)

HSP 1 Score: 200 bits (508), Expect = 1.300e-54
Identity = 103/250 (41.20%), Postives = 154/250 (61.60%), Query Frame = 1 
Query:   61 LCRRQRSRRVPGPPARPTFKVVGVEPRLVTATLQAHGFRRRRQARRRGGRGWTGDGTGWRVLWSSQHLRSHTFRNLRRGQRINSFPRSYECTRKDALLRNMNRMSQVHGIRHFGFAPRGFVLPSEREAVREAMLDAPEGEAWIVKPASSACGRGIFITNTFADMPGESGKSTEGNWIAQRYVDDPLLLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATEPYSEDAGSFGNRFVHLTNYSINRRSSRY 810
            +  R+ S R+ G     ++K++  + RLV + L AHGF                + T + ++W+  HL+ +  RNL   Q++N FPRSYE TRKD L +N+NRM Q HG ++F   P+ F+LP E + +  A L   +   WIVKP +S+ GRG+++ N+ + +      S E N +  RY+++PLL+DG KFD+RLYV VTS+ PL +YL+EEGL R AT  Y + A +  N+F+HLTNYS+N++SS Y
Sbjct:   59 ILTRESSLRIIGERYHFSYKIIRTDSRLVRSILSAHGFHEVHP-----------NSTDFHLMWTGTHLKPYLMRNLLEFQKVNHFPRSYELTRKDRLYKNINRMQQAHGFKNFHLLPQTFILPIEYQELNNAHLK--DRGPWIVKPVASSRGRGVYVVNSPSQI------SLEENILVSRYINNPLLIDGFKFDVRLYVLVTSYDPLVIYLYEEGLARFATVKYDKAARNIKNQFMHLTNYSVNKKSSDY 289
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BLAST of mRNA_D-dudresnayi_contig9319.28116.1 vs. uniprot
Match: A0A553QP77_9TELE (Uncharacterized protein n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553QP77_9TELE)

HSP 1 Score: 198 bits (504), Expect = 3.730e-54
Identity = 100/232 (43.10%), Postives = 142/232 (61.21%), Query Frame = 1 
Query:  115 FKVVGVEPRLVTATLQAHGFRRRRQARRRGGRGWTGDGTGWRVLWSSQHLRSHTFRNLRRGQRINSFPRSYECTRKDALLRNMNRMSQVHGIRHFGFAPRGFVLPSEREAVREAMLDAPEGEAWIVKPASSACGRGIFITNTFADMPGESGKSTEGNWIAQRYVDDPLLLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATEPYSEDAGSFGNRFVHLTNYSINRRSSRY 810
            FK+V  E RLV   L +HGF                + T + ++WS  HL+ H  R+L+  Q++N FPRSYE TRKD L +N+ RM Q +G  +F   P+ FVLP E +    +   + E  AWI+KP +S+ GRGI++ N+ + +P       + N +  RY+++PLL+D  KFDLRLYV VTS+ PL +YL+EEGL R AT  YS    +  N+F+HLTNYS+N++SS Y
Sbjct:   62 FKIVRTESRLVRGLLTSHGFHEVHL-----------NSTDFNLMWSGSHLKPHLLRSLQNFQKVNHFPRSYELTRKDKLYKNIQRMQQSYGFHNFNVVPQAFVLPGEYQEF--SSFFSKERAAWIIKPVASSRGRGIYLVNSISQIP------LDENVLVSRYINNPLLIDDFKFDLRLYVLVTSYDPLVIYLYEEGLARFATVKYSHATANISNQFMHLTNYSVNKKSSDY 274
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BLAST of mRNA_D-dudresnayi_contig9319.28116.1 vs. uniprot
Match: A0A8C1E4Q8_CYPCA (Tubulin tyrosine ligase-like family, member 5 n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1E4Q8_CYPCA)

HSP 1 Score: 187 bits (475), Expect = 1.380e-53
Identity = 94/232 (40.52%), Postives = 141/232 (60.78%), Query Frame = 1 
Query:  115 FKVVGVEPRLVTATLQAHGFRRRRQARRRGGRGWTGDGTGWRVLWSSQHLRSHTFRNLRRGQRINSFPRSYECTRKDALLRNMNRMSQVHGIRHFGFAPRGFVLPSEREAVREAMLDAPEGEAWIVKPASSACGRGIFITNTFADMPGESGKSTEGNWIAQRYVDDPLLLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATEPYSEDAGSFGNRFVHLTNYSINRRSSRY 810
            FK+V  E RLV   L  HGF                +   + ++W+  HL+ +  R+L+  Q++N FPRS+E TRKD L +N+ RM Q HG ++F   P+ FVLP+E +    +   + +  AWI+KP +S+ GRGI++ ++ + +P       + N +  RY+ +PLL+DG KFD+RLYV VTS+ PL +YL+EEGL R AT  Y     +  N+F+HLTNYS+N++SS Y
Sbjct:   60 FKIVRTESRLVRGILVNHGFHEVHP-----------NSNDFNLMWTGSHLKPYLLRSLQDFQKVNHFPRSFELTRKDRLYKNIQRMQQTHGFQNFHIVPQTFVLPAEYQEFSSSF--SKDKGAWIIKPVASSRGRGIYLVSSPSQIP------LDENILVSRYISNPLLIDGFKFDVRLYVLVTSYDPLLIYLYEEGLARFATVKYDHATANIKNQFMHLTNYSVNKKSSDY 272
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BLAST of mRNA_D-dudresnayi_contig9319.28116.1 vs. uniprot
Match: A0A8C2JM79_CYPCA (Tubulin tyrosine ligase-like family, member 5 n=2 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2JM79_CYPCA)

HSP 1 Score: 188 bits (478), Expect = 1.520e-53
Identity = 95/232 (40.95%), Postives = 141/232 (60.78%), Query Frame = 1 
Query:  115 FKVVGVEPRLVTATLQAHGFRRRRQARRRGGRGWTGDGTGWRVLWSSQHLRSHTFRNLRRGQRINSFPRSYECTRKDALLRNMNRMSQVHGIRHFGFAPRGFVLPSEREAVREAMLDAPEGEAWIVKPASSACGRGIFITNTFADMPGESGKSTEGNWIAQRYVDDPLLLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATEPYSEDAGSFGNRFVHLTNYSINRRSSRY 810
            FK+V  E RLV   L  HGF                +   + ++W+  HL+ +  R+L+  Q++N FPRS+E TRKD L +N+ RM Q HG ++F   P+ FVLP+E +    +   + +  AWI+KP +S+ GRGI++ ++ + +P       E N +  RY+ +PLL+DG KFD+RLYV VTS+ PL +YL+EEGL R AT  Y     +  N+F+HLTNYS+N++SS Y
Sbjct:   68 FKIVRTESRLVRGILVNHGFHEVHP-----------NSNDFNLMWTGSHLKPYLLRSLQDFQKVNHFPRSFELTRKDRLYKNIQRMQQTHGFQNFHIVPQTFVLPAEYQEFSSSF--SKDKGAWIIKPVASSRGRGIYLVSSPSQIP------LEENILVSRYISNPLLIDGFKFDVRLYVLVTSYDPLLIYLYEEGLARFATVKYDHATANIKNQFMHLTNYSVNKKSSDY 280
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BLAST of mRNA_D-dudresnayi_contig9319.28116.1 vs. uniprot
Match: A0A8C9TF16_SCLFO (Tubulin tyrosine ligase like 5 n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9TF16_SCLFO)

HSP 1 Score: 188 bits (477), Expect = 1.660e-53
Identity = 96/232 (41.38%), Postives = 141/232 (60.78%), Query Frame = 1 
Query:  115 FKVVGVEPRLVTATLQAHGFRRRRQARRRGGRGWTGDGTGWRVLWSSQHLRSHTFRNLRRGQRINSFPRSYECTRKDALLRNMNRMSQVHGIRHFGFAPRGFVLPSEREAVREAMLDAPEGEAWIVKPASSACGRGIFITNTFADMPGESGKSTEGNWIAQRYVDDPLLLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATEPYSEDAGSFGNRFVHLTNYSINRRSSRY 810
            FK+V  E RLV + L +HGF                +   + ++W+  HL+ +  R L+  Q++N FPRSYE TRKD L +N+ RM QVHG + F   P+ F+LPSE +    +   A +   WI+KP +S+ GRGI++ ++   +P       + N +  RY+++PLL+D  KFD+RLYV VTS+ PL +YL+EEGL R AT  Y   A +  N+F+HLTNYS+N++SS Y
Sbjct:   65 FKIVRTESRLVRSILSSHGFHEVHP-----------NSNDFNLMWTGIHLKPYLLRGLQDFQKVNHFPRSYELTRKDRLYKNIQRMQQVHGFKRFHIIPQSFILPSEYQEFCSSC--AKDKGPWIIKPVASSRGRGIYLVSSPNQIP------MDENILVSRYINNPLLIDDFKFDVRLYVLVTSYEPLIIYLYEEGLARFATVKYDHAAKNIKNQFMHLTNYSVNKKSSDY 277
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9319.28116.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFY6_9PHAE1.620e-10180.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTG1_ECTSI1.020e-9981.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1CKS8_9STRA1.030e-7049.24Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S3XKD1_HETAK7.180e-6456.67Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A2R5GCY3_9STRA1.550e-6344.20Tubulin polyglutamylase TTLL5 n=1 Tax=Hondaea ferm... [more]
A0A6P8RQ11_GEOSA1.300e-5441.20tubulin polyglutamylase TTLL5 isoform X1 n=4 Tax=G... [more]
A0A553QP77_9TELE3.730e-5443.10Uncharacterized protein n=1 Tax=Danionella translu... [more]
A0A8C1E4Q8_CYPCA1.380e-5340.52Tubulin tyrosine ligase-like family, member 5 n=1 ... [more]
A0A8C2JM79_CYPCA1.520e-5340.95Tubulin tyrosine ligase-like family, member 5 n=2 ... [more]
A0A8C9TF16_SCLFO1.660e-5341.38Tubulin tyrosine ligase like 5 n=1 Tax=Scleropages... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9319contigD-dudresnayi_contig9319:5870..10779 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score318.9
Seed ortholog evalue2.3e-84
Seed eggNOG ortholog2880.D8LTG1
Preferred nameTTLL5
KEGG koko:K16601,ko:K16602,ko:K16610
GOsGO:0000003,GO:0000226,GO:0001578,GO:0001654,GO:0003006,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005929,GO:0006464,GO:0006807,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007288,GO:0007423,GO:0008150,GO:0008152,GO:0009566,GO:0009987,GO:0015630,GO:0016020,GO:0016043,GO:0016874,GO:0016879,GO:0016881,GO:0018095,GO:0018193,GO:0018200,GO:0019538,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0030030,GO:0030031,GO:0030154,GO:0030317,GO:0032501,GO:0032502,GO:0032504,GO:0035082,GO:0036211,GO:0040011,GO:0042995,GO:0043010,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044782,GO:0048232,GO:0048468,GO:0048513,GO:0048515,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0051179,GO:0051674,GO:0051704,GO:0060041,GO:0060271,GO:0070739,GO:0070740,GO:0070925,GO:0071704,GO:0071840,GO:0071944,GO:0097722,GO:0120025,GO:0120031,GO:0120036,GO:0140096,GO:1901564
EggNOG free text desc.protein polyglutamylation
EggNOG OGsKOG2156@1,KOG2156@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04812
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTubulin-tyrosine ligase/Tubulin polyglutamylase
Ec32 orthologEc-02_006230.1
Exons6
Model size825
Cds size825
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9319.28116.1prot_D-dudresnayi_contig9319.28116.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9319 5870..10779 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930871.1448562-CDS-D-dudresnayi_contig9319:5869..61351622930871.1448562-CDS-D-dudresnayi_contig9319:5869..6135Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9319 5870..6135 +
1690557947.3032143-CDS-D-dudresnayi_contig9319:5869..61351690557947.3032143-CDS-D-dudresnayi_contig9319:5869..6135Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9319 5870..6135 +
1622930871.1605253-CDS-D-dudresnayi_contig9319:7096..71501622930871.1605253-CDS-D-dudresnayi_contig9319:7096..7150Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9319 7097..7150 +
1690557947.314228-CDS-D-dudresnayi_contig9319:7096..71501690557947.314228-CDS-D-dudresnayi_contig9319:7096..7150Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9319 7097..7150 +
1622930871.1792138-CDS-D-dudresnayi_contig9319:7950..80631622930871.1792138-CDS-D-dudresnayi_contig9319:7950..8063Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9319 7951..8063 +
1690557947.3240237-CDS-D-dudresnayi_contig9319:7950..80631690557947.3240237-CDS-D-dudresnayi_contig9319:7950..8063Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9319 7951..8063 +
1622930871.207748-CDS-D-dudresnayi_contig9319:8716..88451622930871.207748-CDS-D-dudresnayi_contig9319:8716..8845Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9319 8717..8845 +
1690557947.3338952-CDS-D-dudresnayi_contig9319:8716..88451690557947.3338952-CDS-D-dudresnayi_contig9319:8716..8845Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9319 8717..8845 +
1622930871.2231562-CDS-D-dudresnayi_contig9319:9226..93471622930871.2231562-CDS-D-dudresnayi_contig9319:9226..9347Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9319 9227..9347 +
1690557947.3450332-CDS-D-dudresnayi_contig9319:9226..93471690557947.3450332-CDS-D-dudresnayi_contig9319:9226..9347Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9319 9227..9347 +
1622930871.246947-CDS-D-dudresnayi_contig9319:10637..107791622930871.246947-CDS-D-dudresnayi_contig9319:10637..10779Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9319 10638..10779 +
1690557947.3531961-CDS-D-dudresnayi_contig9319:10637..107791690557947.3531961-CDS-D-dudresnayi_contig9319:10637..10779Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9319 10638..10779 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9319.28116.1

>prot_D-dudresnayi_contig9319.28116.1 ID=prot_D-dudresnayi_contig9319.28116.1|Name=mRNA_D-dudresnayi_contig9319.28116.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=275bp
PSPYPSVDTTLYHVARCMCELCRRQRSRRVPGPPARPTFKVVGVEPRLVT
ATLQAHGFRRRRQARRRGGRGWTGDGTGWRVLWSSQHLRSHTFRNLRRGQ
RINSFPRSYECTRKDALLRNMNRMSQVHGIRHFGFAPRGFVLPSEREAVR
EAMLDAPEGEAWIVKPASSACGRGIFITNTFADMPGESGKSTEGNWIAQR
YVDDPLLLDGLKFDLRLYVAVTSFRPLRVYLHEEGLCRLATEPYSEDAGS
FGNRFVHLTNYSINRRSSRYEPGTT
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mRNA from alignment at D-dudresnayi_contig9319:5870..10779+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9319.28116.1 ID=mRNA_D-dudresnayi_contig9319.28116.1|Name=mRNA_D-dudresnayi_contig9319.28116.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=4910bp|location=Sequence derived from alignment at D-dudresnayi_contig9319:5870..10779+ (Desmarestia dudresnayi DdudBR16 monoicous)
CCCTCGCCTTATCCTTCCGTTGACACCACCCTCTACCATGTGGCGCGATG
TATGTGCGAACTCTGTCGGAGACAGAGATCAAGAAGGGTACCGGGCCCGC
CGGCCCGACCAACGTTTAAGGTTGTCGGAGTGGAGCCTAGACTCGTCACG
GCGACTCTGCAGGCGCACGGGTTTAGACGGCGGCGGCAGGCGAGACGAAG
AGGAGGACGGGGGTGGACAGGGGATGGGACGGGATGGCGAGTGCTGTGGT
CTTCGCAACATCTTAGGTGAGTATGACCGCGATGTTTTAGCGTATGTGAT
GACCGCGATTGTTTTAAGTGCTTCAGTGTAAAACGGTGTATGGTGCTACT
ACGTTGTTACGGTACTTACGTACCGTAATTGCTTATTTGCTTGCACTTTT
GGTGCTTTCTCGAAGCTTGTTTTTTTCTTGCTGTACAAAATATACAAGCA
AATATCACGCGTTTCGTTTTTACTTTTTCGGAAAAAAATTAGGAAAAAAC
GCACTCAAATGGTTGATGGTGAACATGCGTCGCCAGGGACGGACCGCGAG
GTGGGGGGGGTTGTTTGGTAACGAAATACACACGCACATGAACAGCCGCC
TCCGCCGCCTGATCCGAACCATATGTATTTCGGGACCCAATTGGGGGGGG
GGGGGCGTTGCTCTGTGTTGTACGGTCGGTTTGTTTCGTGGTGACCGAAA
ATTCCGACGTCCCCCAATCGTGTCCGTTCTCGGATATTATAATTTTTATG
TTATAGTTGACGCAAGCAGATGACACGGTTGGCGCAAGCAGACGACACGA
AGCTTCTCGTCCCTCCTGCTACCACAGCGCCGAACATATATGTACTACTT
ATAATAGTTCTCTCTATAAATTATAGACTACATTCAAATTGTACCGATCG
ACTAACATCATATTTCAACCGTAAGCCTCAAAAATTGCACGATACAGTGG
CGTTTTTGCGACTTACGTCCTTGTCGCTCTCTCTGTCGCTTCGTCTATAC
TGTACATGTATATAGAGTATAGAGGCACGGAGTGCTTGCTGGACGACAAC
CTTACACACCGTGAATAACATCCACTTTTGCGTAGCTTAGTTTGAACGAC
GACGGGCACGCGGGGATTCAATAACCGCCTAAAGAAACACAAAACAGCTT
GTAACGTCTCTTTTTCCCCGCTCCTCTTCCGTCCGTCCATCTTTACGACA
TCAACATATAATACCTCGTGTGTATAGGTCCCACACATTCCGAAATCTGA
GGCGCGGCCAGCGCATCAACAGCTTCCCTAGGTACGGGTCCTTACGAGAG
ATTTCTCTTTGATTTACACGTTCCCACGCCACTCAGGGTTTCTACGTAAA
GCACGACGCCTTCTCCGGTACTCTGCCCCCACCCCCGACCTGCCTGTATC
ACTTTATTTACTCTCTGCACGACGAGCTACGGGAATGAATGCCGAACGAG
CCCTGTGCGCGGGCCATGAAATGAAAGGCGTGTACCGCGAGGGAGGGGGG
GCGGCGTACTTATTTGTGTTGCTTGTCTTAGTCATCTGACCATTGACGGG
CGGGGAGGGGGGGGGGGGCTATGTTTGACCACGGCTTGCTCAGACAGGCG
TACTGAGCGACGAGTTCCTGTGAGCTGGACTAGGGAGTTAGAATGATGGA
CACAAAAAATGATGACCGCGTTGTGTGGGACGTGGGACGACGAACGACAA
TGGATGATGAACATTTCGAAGAAGGAGGCTCACACACCGGCGACGCTCTT
TCTACCACGACGACATTGTTTTTTAACAAAAAATAATTTGTAGATCCACA
AAATGTCAAACCGGTACGGCGATACTGTCGACACGTTGGGACGAGAATAA
TCGCGCTCATTTACCCCGTATATGAGTGACCCTCCGACTCGAGTCCAGAA
AAAGAGATTTATGGTTATGAGTGAGCGAGTGAGTGAGTGAGACAGTTGAC
AAAAAAGAGCCGGTAACATTTTCATGTTAGCGTCGTCGGGGTCAGTTTTT
GCGGGGGACCACAGAGGAGGTTACCACTGACTGACTGTCTTCTTCTTCTT
CTTCTTCTTCTTGAGTTTGTTTTTTGCACAGGAGTTACGAGTGCACGCGA
AAAGACGCCCTGCTGAGGAACATGAACCGAATGAGCCAGGTACACGGGAT
CAGGCATTTCGGGTTTGCACCCCGAGGCTTCGTTCTTCCCTCCGGTAAGC
CCCGTTCCCCGCCCTGGATAGAAATTGCGACGCCACTACCCTCTCCCCCC
CCCCCCCCCCCCCCCGCCTGTTTTGGGAGAATGACACTACTGCTAAAAAC
TAATAATCACCCTCCTCCCGCCGCCCCGCGCGTATCCCCCTGCCTATCCC
TAGAGAGATAGATGGTGGCCACAACATGCGAAACATGAAGGGGATAAGAG
TAAGCAAAAGGTATTCTGTAACATATGGCAAAAACGCGTAAAGAGCGTCC
AGATATTGGAGGTGGCTTTATTAGGAGAGTAGGAATGGTGCTCCGTCTCG
AAAGGAATGCGAAGTCAGTGGTAAAATTACTACTGTAAGGCAATCAACAA
ATGAGTACGCCCCCCGCCCCCCTCCCGTTGTTTTGTTTCCTCTTTTGTAC
GAGAGAAGACTTTCTTAGACTGATAGTTTGGAATTTTGGTGGTTGCCTAT
GTTGACGAGGGAGCGCCAGAGCGAGAGAGAGAGAGATAGAGAGACAGTGA
CAGAGGCAGAGGGAGAGAGACGGAGGGAGAGTGGCATTTTTCACGCGATA
AGGCCGACGGGTGGTAGCTAAGTGCGCACCCGCCCCCCATCGACCCCCCC
CGCCCGCCCGCCCGCCCGCCCGCCCGCCCGCCTGACCGCTGGTGCAGAGA
GAGAAGCGGTACGAGAAGCCATGCTGGACGCGCCGGAGGGTGAAGCGTGG
ATTGTCAAGCCCGCCAGCTCGGCGTGCGGGCGAGGGATCTTCATCACGAA
TACGTTTGCCGACATGCCAGGCGAGTGTCATGCTGGGGTCCATTGGTCGG
TCGATCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTC
TGTCTGTCTCTCTGTCTCTCTGTCTCTCTGTTTGTCTGTCGGTTGGTCGG
TCGGTCATACATTCGCCGCGGACGAACATACCTCCTTGCTCGAATACAGA
CCCGCTCGCCGATGAGGCGTTTCCCCCTGCTCTATTAAATCTATGTTAGT
ATCGTAGGCAGGATAGTGCCGCGATCGACTACAAACCAACTGTAGTCCCG
GTGGCGATATGCTCCTAATAAGTACAGTACACTGAGTACTACATATAATA
ACAACAATAATGGTCTACGTTACATTGTTTCGTCTGATGTTTGATGTCGA
AACACAGCCGGGAAGAGCACCGAGGGAAACTGGATCGCCCAACGATACGT
GGATGATCCTTTGCTGCTCGACGGCCTAAAATTCGACCTGCGGCTGTACG
TTGCGGTCACGAGTTTCCGCCCCCTAAGGTACGCTCCACCTAAGTAAGGA
GGCTTGTTGTGTGCAACGGCTATGGGGGGGGGGGGGGGGGGGGGGGGGTA
CCCATTTGTTGCTTGCCTTGGGCCTGGACCGTTTACCCCCCCCCCCCTTT
CAGGGCGGAGCCCCGTTCNNNNNNNNNNGCGTTGGGTCCCCTGGTCCCCC
CCCCACGGGTGCCCCCGCCGTAAGGTGGGGGGCGTGTGTGGGGGCGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGCGTACCCATTTGTTGCTTGCCTT
CGTCATGTAACCGTTGACCACTCACCCCTTTCAAGGCGGAGCACCGTTCC
TACTCCTGATAGGGACATCTCCAAAGGAGGGGTGGTGCACACGCTCTTGT
CGCGAGTTTCAACTCTGTAAGCCGTCTCATCTGTTGGACACCAGTTAGCA
AGAAGTAAGAAGCTCGGTATTAGACCACGTTGTTGTACGCACAATTCGAC
GAAAACAGACGACGAGCTCTGGGAGTGCCGTACCCTGTGCGCGATAAAAA
CCAAAGGCATGGTGTACGAGGGGCGGAGGGGGGGAGGAGCGTATTCATTT
GTAGGGGGGGGGAGGCACGTACTTACCTGTGGCCACGGCTTGCTCGGAGA
GGCGCGCTGCATGACCAACGAGCTCCTGTAAGCTGGAGAACAAGAAACAA
AAAAAGAGATGTTGTCCTGGGCTGGATAGATGGATGGTTGTTGACCTTTC
TATATTATCATATACAGTAGCTACCTCGGGAGTAAACCCCAGAGGACTGT
CAAAAGCTGTAAACTCAGAGTTAAGCTGAATATTTATTCGGGAAGGGTAT
TTTGTGTCTACTCGTACACTTGTTGGGATCTACCATTAGTACATATTCAA
TCTGTGTCTCTTTCTTTGCTTGAATTCTAGCATGGATGATGGCCCTTTCG
CAAAGGGTGGCGTTGTTTGCAGGTTTCTTCTGGCCTTTTAGCATAGCGTA
GTTTCTCGAGTCAAAAGTGTGCTGTTGTTGTTCTGCGTCCGTCCATCCAT
CCACCTATCCAATCCACCATGCATCCACCCACCAAGGTGACTGTTCGTCC
TATCGAGGCGACCTGATTTAAAACCAAGATACCTTAACACAAACATGCCA
AAAAAATTAGCAAACCTACCTTCCCTCCCCCCCTCCGCCCACCCCAATAT
GCACACATGTACACGCACAACGAATACCGAAAACGCATGGCGTGAACCGT
TGTGGTGGTGTTCACTACAACAAACCTAACCTAACCAAACGTAAGCTAAC
GTAAACTAAACTAAACAGGGTGTACCTGCACGAGGAGGGACTGTGCCGGC
TGGCGACGGAGCCGTACAGCGAGGACGCGGGTAGCTTTGGCAACCGATTC
GTGCACCTAACGAACTACAGCATCAACCGGCGGAGCAGCCGCTACGAGCC
TGGCACGACC
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9319:5870..10779+

>mRNA_D-dudresnayi_contig9319.28116.1 ID=mRNA_D-dudresnayi_contig9319.28116.1|Name=mRNA_D-dudresnayi_contig9319.28116.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1650bp|location=Sequence derived from alignment at D-dudresnayi_contig9319:5870..10779+ (Desmarestia dudresnayi DdudBR16 monoicous)
CCCTCGCCTTATCCTTCCGTTGACACCACCCTCTACCATGTGGCGCGATG
TATGTGCGAACTCTGTCGGAGACAGAGATCAAGAAGGGTACCGGGCCCGC
CGGCCCGACCAACGTTTAAGGTTGTCGGAGTGGAGCCTAGACTCGTCACG
GCGACTCTGCAGGCGCACGGGTTTAGACGGCGGCGGCAGGCGAGACGAAG
AGGAGGACGGGGGTGGACAGGGGATGGGACGGGATGGCGAGTGCTGTGGT
CTTCGCAACATCTTAGCCCTCGCCTTATCCTTCCGTTGACACCACCCTCT
ACCATGTGGCGCGATGTATGTGCGAACTCTGTCGGAGACAGAGATCAAGA
AGGGTACCGGGCCCGCCGGCCCGACCAACGTTTAAGGTTGTCGGAGTGGA
GCCTAGACTCGTCACGGCGACTCTGCAGGCGCACGGGTTTAGACGGCGGC
GGCAGGCGAGACGAAGAGGAGGACGGGGGTGGACAGGGGATGGGACGGGA
TGGCGAGTGCTGTGGTCTTCGCAACATCTTAGGTCCCACACATTCCGAAA
TCTGAGGCGCGGCCAGCGCATCAACAGCTTCCCTAGGTCCCACACATTCC
GAAATCTGAGGCGCGGCCAGCGCATCAACAGCTTCCCTAGGAGTTACGAG
TGCACGCGAAAAGACGCCCTGCTGAGGAACATGAACCGAATGAGCCAGGT
ACACGGGATCAGGCATTTCGGGTTTGCACCCCGAGGCTTCGTTCTTCCCT
CCGGAGTTACGAGTGCACGCGAAAAGACGCCCTGCTGAGGAACATGAACC
GAATGAGCCAGGTACACGGGATCAGGCATTTCGGGTTTGCACCCCGAGGC
TTCGTTCTTCCCTCCGAGAGAGAAGCGGTACGAGAAGCCATGCTGGACGC
GCCGGAGGGTGAAGCGTGGATTGTCAAGCCCGCCAGCTCGGCGTGCGGGC
GAGGGATCTTCATCACGAATACGTTTGCCGACATGCCAGGCGAGTAGAGA
GAAGCGGTACGAGAAGCCATGCTGGACGCGCCGGAGGGTGAAGCGTGGAT
TGTCAAGCCCGCCAGCTCGGCGTGCGGGCGAGGGATCTTCATCACGAATA
CGTTTGCCGACATGCCAGGCGAGTCCGGGAAGAGCACCGAGGGAAACTGG
ATCGCCCAACGATACGTGGATGATCCTTTGCTGCTCGACGGCCTAAAATT
CGACCTGCGGCTGTACGTTGCGGTCACGAGTTTCCGCCCCCTAAGCCGGG
AAGAGCACCGAGGGAAACTGGATCGCCCAACGATACGTGGATGATCCTTT
GCTGCTCGACGGCCTAAAATTCGACCTGCGGCTGTACGTTGCGGTCACGA
GTTTCCGCCCCCTAAGGGTGTACCTGCACGAGGAGGGACTGTGCCGGCTG
GCGACGGAGCCGTACAGCGAGGACGCGGGTAGCTTTGGCAACCGATTCGT
GCACCTAACGAACTACAGCATCAACCGGCGGAGCAGCCGCTACGAGCCTG
GCACGACCGGTGTACCTGCACGAGGAGGGACTGTGCCGGCTGGCGACGGA
GCCGTACAGCGAGGACGCGGGTAGCTTTGGCAACCGATTCGTGCACCTAA
CGAACTACAGCATCAACCGGCGGAGCAGCCGCTACGAGCCTGGCACGACC
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