mRNA_D-dudresnayi_contig10573.648.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10573.648.1
Unique NamemRNA_D-dudresnayi_contig10573.648.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10573.648.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10573contigD-dudresnayi_contig10573:5117..7606 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size328
Cds size327
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927561.771756-CDS-D-dudresnayi_contig10573:5116..51971622927561.771756-CDS-D-dudresnayi_contig10573:5116..5197Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10573 5117..5197 +
1690556808.1534684-CDS-D-dudresnayi_contig10573:5116..51971690556808.1534684-CDS-D-dudresnayi_contig10573:5116..5197Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10573 5117..5197 +
1622927561.7862165-CDS-D-dudresnayi_contig10573:7360..76061622927561.7862165-CDS-D-dudresnayi_contig10573:7360..7606Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10573 7361..7606 +
1690556808.163077-CDS-D-dudresnayi_contig10573:7360..76061690556808.163077-CDS-D-dudresnayi_contig10573:7360..7606Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10573 7361..7606 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10573.648.1prot_D-dudresnayi_contig10573.648.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10573 5117..7606 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10573.648.1

>prot_D-dudresnayi_contig10573.648.1 ID=prot_D-dudresnayi_contig10573.648.1|Name=mRNA_D-dudresnayi_contig10573.648.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=109bp
DGASGSAAGAGRMSLSFFDDPPEEEEEPTTSAPSPKRDMMCTSSAQPNID
MMSDDDDEQENSENVIRFSSGSANPRFSSKPRPLGGSTTMVGQGVRPALR
DGFPGGDGG
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mRNA from alignment at D-dudresnayi_contig10573:5117..7606+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10573.648.1 ID=mRNA_D-dudresnayi_contig10573.648.1|Name=mRNA_D-dudresnayi_contig10573.648.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=2490bp|location=Sequence derived from alignment at D-dudresnayi_contig10573:5117..7606+ (Desmarestia dudresnayi DdudBR16 monoicous)
GACGGGGCAAGTGGGAGTGCTGCGGGGGCTGGCCGGATGTCTCTGAGTTT
TTTCGACGATCCTCCGGAGGAGGAGGAGGAGGTGCGTGCGTGCGTGCGTG
CGTTCGTGTGTGCGTGAGTGTGTTTTGTTTTAGGAAAGAGAAGAAACAAA
GTTAGCCAACTAGCTGTACATGCTGTTGTTGTTGTTGTTGTCCCTGTTTG
TTCAGTAAAGAGAAGGAAGAGTTAGCCAAGTAAGTGAACATGTTGTCGTT
GTTGTTGTTGTCCAACTACTTGAGCATGTTGTTGGTGGTGTCCAACGAAC
TGTGCATGTTGTTGTTGTTGTTGTTGTTGTCTTGACTTCAAACACCGCAC
AAGACGAAACAAGTTAGTGAATTGCACCTGTTATTGTTGTCCTGATAATT
GTGCATGTTGTTGTCTTTGCAGTAAACATGGCAGGAGGAACAAGTTAAGC
CAACTGGGCATGTTGTTGATGATGCTGTTGTCATTGTTGTCCAACTAACT
GTGCATGGTGTTATTGTCTTGGCATTAAACATGGCAGAAGAAACAAGTTA
GCCAACCACCTGTAACGTGTTGGTGTTGTTGTTGCTCAACTAATTGTGTT
CGTTGCTGTTGTTAAATACCTGGTATGGCAGGAGAAACGTGTTACCCAGC
TGTACATGTAGTTGTCTTGACATTAAACATGACAGAAGCAACAAGTTAGC
CAACTACCTGTGCATGTTGTTGCTGTGGTGTCCAACGAACTGTGCATGTC
GTTGTTGTTGTCTTGACATTAACATGGCAAAATACAAAAGAAACGAGTTA
GCCCACTGTACATGTTGACGAGATAACATTAAAAAAAACTGACCCCTGGA
AATTCGTGGAGCTTACGAAGCTTTCATTTTTACCCGTCCACCCGAGGATA
ACAATGGTTTTGAAAAAAAAAAAGTTGTTGTCCAACTAACTGTGTACTTC
GTATATTGTTGTCGTCTTGACATTAAACATGGCACAAGAAGCAAGTAAAG
TCAACTGTACGTGTTGTTAGGGTCGTTTCTAACGGGCAAAAAAAAGTCCA
CAATCGTGATTTTGAATCGAATTGAAACAACCTAAAAATAAAAAAAAAAA
TCACGATTCGTGACTTTCAAACAGAATTGTTGGCAAGAAAAAAAGATTTC
CAAAAGTCACGAAACCGGACTTTTTGTCACGATGGTTGAATTTTTTTTTG
CTCGTTAGAAACGACCCTTATTATTTTTGTCCAACATGCGATTTCCCCCT
AGGGCGACGTTTTTTTTTTTTTTCCCTTTTTTTTTTTTCAAGTGGGCTAT
GTATTACAGAGGCCGATAACAAGGTGAAAAGGGGCGATCGCAAGTATCTT
TATTCAGTAGTGCAACTGTCAAAATACGGCGAATGCTGGTGTATCTGACC
TCTGAAACACGGAGGTTAGTAGTGGGAATGTTTGCATAAATACGCCCCGT
GGTGACGTGTCTGACCTCCGAAACATGAAGCTTAGTAGTGAGAGTGTCAA
AAATATGGCGAGTGCTGACGTGTCTAGCCTCCGAAAGACGGAGCTTAGTA
GTGAACTTGTCAAAATACGATGAGTGCTGGCGTATCCGCCCTCCGAAAAA
TGGAGTAAATTACGAGTACAGTAGTGTGACTGTTTGCCGAAACAAGGTGA
AAAAGGGCGATCGCAAGTATCCTTATTCCCGACCCCCCCCCCACCCCCCC
CCCCCCCGAAGCATGAAAAAGTAGCATCGTTGATAAGTCTACTGCCGCAC
CGCATGATAGAAACGAACAAGATTCGTGATTCACGGTGACGTCTGTCTCG
CGATACACGTCAATATAAGCGTTTTGGGCCTATTTACTAGGCGCCCTCGT
GATAGGTGGCCTTCGCGTTCGATGTTTGGAGTACCGCCACCTCCCACCCA
CCCACCCACCCTGGTCAAGATTTCCTCCGTGCCAGTTTCATTCTGTGCTT
ACAGGTAGCCGTTTGCCGTTTCTCCGAGCGTTTTCTACAAAAATCCATTT
TTTTGCCCCCCTCTAGTTCGGGGGCTGGTGCTATGGATTTTTTTTTACTT
GCTGTTAGTATGGTGTGGTCGTTAGTCTAAGGCTAAGGTTCGTTCTAGAA
ATTGTTCCGAACTGCTGAATAGCCCACGTTGGTATATATACTACTGTTAT
TAGTATAATAAAACGAACATCCCATAGCTCCCCCCCGAATAAGTTGTAAC
GTAGGCTCCCCCTCTTCCTCCATTCCGGTGTCCTCTATCCGCAGCCCACG
ACTTCGGCGCCTTCTCCGAAGCGGGACATGATGTGTACAAGCTCGGCCCA
GCCCAACATCGACATGATGTCCGACGATGACGACGAGCAAGAAAATTCTG
AGAACGTTATTCGATTTAGTAGTGGCTCTGCCAACCCGCGATTTTCTTCG
AAACCGCGGCCTCTTGGTGGCTCGACAACCATGGTAGGACAAGGAGTGCG
CCCCGCGTTGCGAGACGGGTTTCCAGGGGGAGACGGCGGG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10573:5117..7606+

>mRNA_D-dudresnayi_contig10573.648.1 ID=mRNA_D-dudresnayi_contig10573.648.1|Name=mRNA_D-dudresnayi_contig10573.648.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=654bp|location=Sequence derived from alignment at D-dudresnayi_contig10573:5117..7606+ (Desmarestia dudresnayi DdudBR16 monoicous)
GACGGGGCAAGTGGGAGTGCTGCGGGGGCTGGCCGGATGTCTCTGAGTTT
TTTCGACGATCCTCCGGAGGAGGAGGAGGAGGACGGGGCAAGTGGGAGTG
CTGCGGGGGCTGGCCGGATGTCTCTGAGTTTTTTCGACGATCCTCCGGAG
GAGGAGGAGGAGCCCACGACTTCGGCGCCTTCTCCGAAGCGGGACATGAT
GTGTACAAGCTCGGCCCAGCCCAACATCGACATGATGTCCGACGATGACG
ACGAGCAAGAAAATTCTGAGAACGTTATTCGATTTAGTAGTGGCTCTGCC
AACCCGCGATTTTCTTCGAAACCGCGGCCTCTTGGTGGCTCGACAACCAT
GGTAGGACAAGGAGTGCGCCCCGCGTTGCGAGACGGGTTTCCAGGGGGAG
ACGGCGGGCCCACGACTTCGGCGCCTTCTCCGAAGCGGGACATGATGTGT
ACAAGCTCGGCCCAGCCCAACATCGACATGATGTCCGACGATGACGACGA
GCAAGAAAATTCTGAGAACGTTATTCGATTTAGTAGTGGCTCTGCCAACC
CGCGATTTTCTTCGAAACCGCGGCCTCTTGGTGGCTCGACAACCATGGTA
GGACAAGGAGTGCGCCCCGCGTTGCGAGACGGGTTTCCAGGGGGAGACGG
CGGG
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