mRNA_D-dudresnayi_contig10545.596.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10545.596.1
Unique NamemRNA_D-dudresnayi_contig10545.596.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10545.596.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10545contigD-dudresnayi_contig10545:1299..8251 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size332
Cds size330
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10545.596.1prot_D-dudresnayi_contig10545.596.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10545 1299..8251 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927557.6868026-CDS-D-dudresnayi_contig10545:1298..13611622927557.6868026-CDS-D-dudresnayi_contig10545:1298..1361Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10545 1299..1361 -
1690556806.4009254-CDS-D-dudresnayi_contig10545:1298..13611690556806.4009254-CDS-D-dudresnayi_contig10545:1298..1361Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10545 1299..1361 -
1622927557.703226-CDS-D-dudresnayi_contig10545:2042..21541622927557.703226-CDS-D-dudresnayi_contig10545:2042..2154Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10545 2043..2154 -
1690556806.4134994-CDS-D-dudresnayi_contig10545:2042..21541690556806.4134994-CDS-D-dudresnayi_contig10545:2042..2154Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10545 2043..2154 -
1622927557.7210681-CDS-D-dudresnayi_contig10545:8096..82511622927557.7210681-CDS-D-dudresnayi_contig10545:8096..8251Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10545 8097..8251 -
1690556806.4241018-CDS-D-dudresnayi_contig10545:8096..82511690556806.4241018-CDS-D-dudresnayi_contig10545:8096..8251Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10545 8097..8251 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10545.596.1

>prot_D-dudresnayi_contig10545.596.1 ID=prot_D-dudresnayi_contig10545.596.1|Name=mRNA_D-dudresnayi_contig10545.596.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=110bp
MHVVSDSDLKASLLLADRRYDEVQAKKQAVRFERRRRIRETLATTHATEE
KSLRCASKADKEAGTLKRAFEKATTLEELERDEMTDADEDSRVQMALLAE
KLGAMDNAKD
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mRNA from alignment at D-dudresnayi_contig10545:1299..8251-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10545.596.1 ID=mRNA_D-dudresnayi_contig10545.596.1|Name=mRNA_D-dudresnayi_contig10545.596.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=6953bp|location=Sequence derived from alignment at D-dudresnayi_contig10545:1299..8251- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGCACGTGGTGTCTGACAGTGATCTCAAGGCTTCACTGCTGCTTGCCGA
CAGACGTTATGATGAAGTTCAGGCCAAGAAGCAGGCAGTGCGGTTCGAGA
GACGTCGTCGCATACGTGAGACTTTGGCAACAACTCATGCCACCGAAGAG
AAATCGTGAGTGCTAAGACCTTGGTTCTACTGTCACAAATTCAACAACCG
AGTAGATATCATGGGGTGATAATTATCAAGCGTCTACGCGCGAGTAGTGT
CGTAGGGCTTGTTTACGCTGTTTTCAAGCGAAGGGCCACGTTGTGGCTGC
TACAAAGTCATGGTGTGTACGCTGCTATCTGCTATCACACGGTGCTGCGA
CGGTGCTACGATAGTTGCGCCGCGTTTCGGTTATTTGTTGGCAAGACAAC
GAACAGTAGTAGACGTCTAGACTACGTCGCGCTGTCATCGGTAAATGCGG
TGAATGGAACAGGGCCTCCACATGACCTTGCCGAAGAGATTTATGCCATA
AGCTGAAGCTGAGTGCCGGTAAAAGAGAACGATTCCTTTGCAGTTGAGGA
TTGATGACATTGCACCGCATTTATTTTCATTTTTGAACGCACTGAATGAT
ATGAGTATTCAGCCGTGAAGTTCCAAACTGGTTCGGGGGCGAGGGGATAA
TCGTCAACCTCACTACGGCGCAATAATTCAGTCGCGCGGGGTCTATCGGT
CCTCAGATAAAGTGTAATGCAGTGACTCCCGTGGGTTATCCCAAGACTCA
TTTATGATCTTGTGTTCTTTGTTTTATATGTATTGTTGCGCAGAAGGACA
CAAAGACAAGAAAGAAGGGAACCCAGACAAGCAAGGAAAACGGAAGAGAA
TTATCACCGCGTAGCTCCCCCCCCTTTCCCGTTCCTGCTACTTAGGGGCC
TTCTCAACTTCTTTCGCGTCGCGTTCTCTACTCCTCGCCGCTTGCTCTCT
ATGCCACGTTTCCATGAAGGTTTCAATCCCCTCTAGAACTCCCCTACACC
ACATTCCCCACTCGATGGCTGCTGCAGTCCATAGCGGAGTCTCTACTCCA
AAGATCATGTGGGGCTTTTCCCTTGCTTCCACGGTGAGGGCACGGAACGC
GGTGAGATCATCCAATAAACAGTACATCCAGGTCCTGGCCGGTCTACCTC
GTCCCGGGTTCTGCCCATCAGACAGTGTCCCTGACATCACCCGCTTAGGT
AGCCGCCCATCGTGCTTCCTAGCGACGACCCCCGCGAATAAAAATCGCCG
TTTCCGAATACTACTCGCAGTCGTTTCGACACTCTCACACTGGGTCTCCG
CGAGCGCCGTCGCGTACAACATGAGATGATCGGTACGTTGTCGACGTTCG
ACACTAATGACTCGCAGGAGGTGGTGGTGGTGTGCCGTTCGGAGTTTGGT
GAAGTGCTGTCGGCTAAGTGTCCATGTCACGCATCCGCACAACATGGTCT
CGATCACTTTGGCATTTATAGCATACACACCTCCAGCATAAACGGTGCCG
CCGGTCGGTCTTACAACTCCCGGCTTTACCTTCTGAGGCATCCCCATGCG
AGTTGAATCGGCATTCGATCTCCGGCGTGATGTCGGCGCATTCAATGGCG
GCACCGCCCAGGTATACAAACTGGCTTGTTTGCTTATACTTTTGGCCGGC
TGTTTCGACCACTAATGGTGCGCGCAGAGGTGCCTGTTTCGGTGTCCGTA
GCATCATGGTCCCCGCTTTTTTCTCCGAAGCGCTAAGGCCTGCGGTCTCG
AACACCGTCACAATGACCGTCATCATCTTCGCGAGACCTTCCGGCGACTT
AGATACAACGCCGGCGTCACCTGCGTATAGCATGTATCGCCCTCCGTACA
CGTTCTAGTGGTGGCTGTTGGTACCCCCCACCCCGTCCTCCTCGAGGTGA
ACCAGGTTGGCAAGTATGTTTACGTCCTCGCTAAAGCACGAGAACAACGT
GTAACACCACGGCGATTGTTATATTGAACAACAGAGGCGATGGCACACGT
CCTTGCCGTAGCCCCTGTGTGACATCGAACCACACTGAGAGTTCGCCGTC
GTCCGTACGTACGCGGGCCCGCATGCCGTCATGGAACTGGCCGATCGAGG
GCGGTACGCCGAACCGACGAAGCACCTACCAGAGCAGGTCTCGATCGACG
GAGTAATATGTCTTCTGGAGGTCGATGAAGCACATGTACAGCAGGATTTC
CTCTCTCACCCGAGTTCCTGCAGTCGGCGTACTACAAACAGCATGTCAAC
GGTTGACCGTGCCGAGCGAAACCCGCACTGCTACTCTGGGAGTATCCCCC
CAACCTCACAGTGGGAGCTGAGGCGGGCTGAGACAATTTTCACAAGCATT
TTTCCTGCGTGGGCTACGAGTGAGATCGCTCTGTAGTTATTACAGTCGGA
GCGGTCTTTCTTCCTGTGAAGGACTTTGATCATGGCGTCCTTCCACTGCT
GCGGGACTTCCCCCGTTCGCCACACGCTGACAAGGATACAATGGAATTGC
CACCAGAATTCGGTGTTGTCAAGTGTTAGCAATTCGGCCGGGAGAGAGTC
TGGTCGTCTGGTCCTACCGCCTTCCAGTTTGCCACACCGCCAGATTTCTT
CCACCTTATCCTCCATCCGTCGGCTCTAGTCCAAGTCTTGGTGCTACGGG
TCGTTGTGGGAACTGCTCCTTAATTTGGATCGAGCTTGGGCGATTTCATG
TTCAGCAAGGTGTGGAAAAACCTCGCGCACCGTTCACGAATACGTCCCTT
TTCCCGCAGTAGTGTACCATCCTCGTCCTTGATAAACTGCTCGCCACCGG
CCTTCCTCCCTTTCGAAGCCACCGCCCTCGTAAGGTGCTTGTAAGACCCG
CGTTGATCATTGCGCTCGAGGCATCCTTCAAGTTCGGCGAGATGCTCTTC
GAAATGGGCATACAACCCTGTACCGACCACCGCTCATAGTTTCGCATACG
CGTTCCGAAGTGTCTTACACACTACCCTATCTTTGGGGTTGCCCCATGCC
ATTTCGGGCTTCCTCTCTCTCTTTCCACGCCTGAGCGACGGCGGCCGATG
TTGCTGCAGTCTCACACCATCCCCGCGCGTGGTGGTGTCGTGGCGGCGGT
GGAATTTATGCCTCTGCTGCCTCTACAACGATGTTCGTGAACGCATCGAC
TCGCTCACAGGCGTTGGAGAACAGGTCTGGGTGCTCGGCGAGGTCAGAGT
TGATCCTCTCGGTGACACGCCCGCGGCGGTCGACGTCGAACCTCAGCAAA
CATCTACCAAACAGTCTGCAATAATATATGGTCTGTCACACAGGCCTGTT
GGGGGCGAAGCGTCTGCGGAGTTGGACCTTCGCGTATATGATATTATGGA
CTGAGTCCGCCTTGGCTGGAGGCGGGGGTTGGGAGTGGATCGTAACACCC
TGTACTCTCGGTCGATGTGCTTGCCGGGTCAGAATATAGTCGAGTAGCAT
ACAGTCGTTACGGTGGACGATTCCATTTTGTGTGCGCGATATTCCACCCT
TGCGTGCACAGAAAAAAGTGTTCGTTTAGAGAAGGTTTATTGTTGGCAGC
AAAAGTCAATAGAAGTGTACCATTCTCGTTCAGCGCGTCACGTCCGTATG
CTCCGAACACTTTACCACTATCGTCTTCCCCTCTTTCAACTCTCTTCCCA
AACCGTGCATTAGCATCAATAATCAAAACGAACAGGTATATCCTTCCCTT
GTATTCGTTGGATTACGTCGTGCAACCTTTGCCAGAAATCCCGCTTTCGC
TCGGAATCGTTGCTGGCTTCAGTCGGGGCGTACGCAACTACGAAATTACA
GCGTCATATATGCCAGTCGTTTTGAAGCGCATACACACCAGGCGCTCGTC
AACGAAATCGCTGCTGTATTCAGACCTACGGCAAATAGACTCTTTTACCG
CGAGTCCAACACCACAGTGCCCTTGCCTGTGCTGTGTATCCTCATACTGG
CCACAGCAAAAGACACGGTAACCCGCAGCAAAAAAGTCTGTCCTCCCAGG
TCTCCGAATTTCCTGCAGGCCCACAAAATTGATGCCGAGCTGGCGAGCTT
TTGCCAAGACGCACTCGTCGTGGCCATACCCGTCACTTCCCTTCACAGCC
AGGGTGCGCACATTGTAGGTAGCTACCGCGGCAAGTTTGCCCTTCCGTCT
CTCTCGTATCGTACGTGCTGCTTTCCTCATCAGTCGACGCACGACTCTAC
CCCTTCGTCTTTTTTTCTTGCTTTTTTTTTCTCTTGTTTGCGATTCGGTA
TGTTATGCAAATAGCCCGATACATGCTGTTTTTCTGTTGACTGGGGGCAG
CTGTCTCAGCCGACCCCGTCGTCTTCACTGTCGGCCTTTGTGATTTCTCA
CGCAAGGGCCACTTTCTCTACTCACCACGCTGTCCCCAATACGCTTCCCG
CTGTGATGGGGCCTATGCGTTAAGGACATGAACGCCATGGCTTTGGGTTT
CTGTGACAGACCTCATAGCCCACCACTACGCAGCACGGCCTTTCGGATAA
CTTCCCCGTTCGGATTGACCAAGGTAGCTCACCTACCAGGCTGCGTCAGG
TTCCCCTCTACCGAGGCATGGGCTTGGATGTTCGGTCTTCAGTTCGTGGT
CTAGACTGTTGGGAGGGAGTCTTGGCGGGGCTCGGCCCACCCTGTGCAGG
GGGGCAGGCCGGGAGTTTGTGTGTGTGTGCTTTTTTAAAATTATTGTACA
AGACATCAAATACATCATCAGCCGTGACATTTTGGGAAGACAACGATGGT
ATGTGGTCGATGATAAGATGGTGGTGTGTCACACACTTTTTGTTGGATAT
TTGATGATCTTTGTAAGAATTTGCTGTTATGATAGTAAGCGAGTGAACGT
CGGGGCGATTCACCCGAACATACACATACCAAGGCAAGCTCCATCATGTG
ATTGGCTGATAAGCTGTTTGTCGCCCCCCTATTGGCGGAAGTTCGGGGTG
TGATTCCCGGTGAAAACAAAAAATGGCACTTTTCTGTGCCATCTTGTGTC
GTCGCGGAAAGCGCGAGAAGAGCGTGAGTACGCACAATTTCGAAGAAAAT
CGACGAGCTATGGGAATCCCGACCCCGGTTCGCGACATAATAAACCGATT
CATAATGTACCGGAGGAGGAGAAGGGGAGACAACGATTATTAATAATTGA
TTGAATTAATTAATTTTCACTTCCGAAGAAGACGATGTATGCTCAAAATA
ACAAAATAACCAGGAAATATACGAGTACCTCGCACACTGCCCCCCCCCCT
CCCATCCCACCATGTTATGTGGGACTTATTATAACACCCATTTATTATAT
GCGCCCTATTCTTTCTCCAGCTCCATCTTTCTTCGTAACTCAGATCCGGG
GTCACATAGCAGCAGGCGCTCCTCCCCCCTCCCCACTACGGCACGTGCCT
ATAATTTTACCTCGAGAAAATCACTTTCTTCGTTCGTCGACTTTCATGGA
ATTATGCGTGCTCACGCTCTAGCGCTTTCCGCGACGGAAGATGGCATATA
AAAGCACAACCTTTTGTTATCACCGGGATTCGAACCCCGAACTTCCGCCA
ACTGGGATCACAAGCAACCACCTGGCCTATTTGCCACCCACTTCGGCGTG
TATATCGAAGATTCACTCCGAATCCCGAGTATAGCCCATACTTCGAGTGA
GTATAAACAACAACAGTCGTAGTGAGCTGTAAGCAAAAATATTTTTTTGC
TAAAAACGAGCATAGTTTTTGGCAGCAAAAATCAAGTTGTTGCCTCGCGC
AGCAATCATAGCCTAGAATGCATATTCATATAGAAGTAGTGCCAGACAAC
GAACAAAGCAGACACGTTGTGAAAAGGCACGGCACAGAGTTTGTTCACGT
GATTGTTGTAGAACGATACCGAGTAGGTAAGCCACGAGCACGCCATCACC
CACCGCTGCACTCGAAACGTTATCCCCGCCTGCTGTATTTGTACATGCCC
CACCAGAATCCTCTACGGTGAGCTACAGTATTAGGCGTGCCCATACATAC
ATGCTGTTGTTTCACATTGATTGATCGATTGTCGCCGGCACAAAAAAAAA
AAAAGCTCGATGTGTAATGTATGCGTGCGGGCTCCGCTGGCGCGCAGATT
GCGCTGCGCTTCGAAGGCTGATAAGGAGGCTGGGACCCTCAAGCGCGCTT
TCGAGAAGGCAACTACGCTAGAAGAGCTGGAGAGGGACGAGATGACCGAC
GCAGACGAGGTTAGCGACATACGAAGTACTCCGTATATGTGACCAAAATG
GTATGCCAGCAGACAACAGATAAGTTAACCCTTGGAGTTTTTATTTTCAT
TTGCACACGCCGCCCTGCGACACACACCATGAAATGGCGAATCAAATCGC
TTTGCACCCCATCATCGTACTACGCAAAAAATGACTTGGATCATGAAGAT
ACTTCACCCTGCAACAACATCTGCCTCTCTGCGTGTGTTCTTGATCAGTG
ATACGACAAAACATACATTTTTTTTTGTTTTCGAGCCATTCTCCACGTAG
GCATATCATACAATATCATACTGTAAGAGTACGTACTCATATGTTGTTGT
GGTTTTCTACGCTGCTCCCGGTTTTGTGCGATATTTCTGCATTCCCGCAG
TGGGTGCACTACTACTGTGCGTTGGTCTGCTTTAGATTTATTTTTTTCGA
GGTAATAATACGAGTAATACACTTGTACCTGGTATTCGTTATTTTGCTTT
ATTTAATAGTATTGACGGGGGGTACAGAAAATGCTAGAAATATCTATAGC
TAACCCTAACCGTAACCCAAGTGACCATCCTATACTAATGGTGAGTCATA
AACTTCCAAGAAATTGCTATCTAAACAAGTGTAGTAAGTGCTGGTTTTTT
CAGCCCCCTTTCGTTTGTAATTTCTTCACCGGATGAGCAGGACTCGCGAG
TGCAGATGGCCTTGCTAGCCGAGAAGTTAGGGGCGATGGACAACGCAAAG
GAT
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10545:1299..8251-

>mRNA_D-dudresnayi_contig10545.596.1 ID=mRNA_D-dudresnayi_contig10545.596.1|Name=mRNA_D-dudresnayi_contig10545.596.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=660bp|location=Sequence derived from alignment at D-dudresnayi_contig10545:1299..8251- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGCACGTGGTGTCTGACAGTGATCTCAAGGCTTCACTGCTGCTTGCCGA
CAGACGTTATGATGAAGTTCAGGCCAAGAAGCAGGCAGTGCGGTTCGAGA
GACGTCGTCGCATACGTGAGACTTTGGCAACAACTCATGCCACCGAAGAG
AAATCATGCACGTGGTGTCTGACAGTGATCTCAAGGCTTCACTGCTGCTT
GCCGACAGACGTTATGATGAAGTTCAGGCCAAGAAGCAGGCAGTGCGGTT
CGAGAGACGTCGTCGCATACGTGAGACTTTGGCAACAACTCATGCCACCG
AAGAGAAATCATTGCGCTGCGCTTCGAAGGCTGATAAGGAGGCTGGGACC
CTCAAGCGCGCTTTCGAGAAGGCAACTACGCTAGAAGAGCTGGAGAGGGA
CGAGATGACCGACGCAGACGAGATTGCGCTGCGCTTCGAAGGCTGATAAG
GAGGCTGGGACCCTCAAGCGCGCTTTCGAGAAGGCAACTACGCTAGAAGA
GCTGGAGAGGGACGAGATGACCGACGCAGACGAGGACTCGCGAGTGCAGA
TGGCCTTGCTAGCCGAGAAGTTAGGGGCGATGGACAACGCAAAGGATGAC
TCGCGAGTGCAGATGGCCTTGCTAGCCGAGAAGTTAGGGGCGATGGACAA
CGCAAAGGAT
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