mRNA_D-dudresnayi_contig10539.588.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10539.588.1
Unique NamemRNA_D-dudresnayi_contig10539.588.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
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BLAST of mRNA_D-dudresnayi_contig10539.588.1 vs. uniprot
Match: D7FW02_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW02_ECTSI)

HSP 1 Score: 360 bits (924), Expect = 9.360e-120
Identity = 218/258 (84.50%), Postives = 236/258 (91.47%), Query Frame = 1 
Query:    1 MERAVQLSFELGRDRNPAGVAHERRSKLAKARGEAAEKIAEFNHWATEADKHIEHKVREESSRMRDLKDEHGRAREEFRDRLKRQRAVDKMQLAKVEREKXXXXXXXXXXXXXXXXXXXXXXXXXXXQKTELERVKMETEGRILAERKNHDLRIEQKRQQAADTRETVLSGLKLTGETLGQGMAEFLGNRQEMTAVVAGLSAAALGIYSAKMGTGVMGRYIEARLGRPSLVRETSRRSLVETLRHPLQGAKRFFKSVR 774
            MERAVQL+FELGR+RNP+ +AHERRSKL K R E ++K  EF+HWATEADKHI+HKVREE++RMR+LKDEH RAREEFRDRLKRQRAVDKMQLAK+EREK         XXXXXXXXXXXXXXXXXXQKTELERVKMETEGRILAERKNHDLR+EQKRQQAADTRETVLSGLKLTGETLGQG+AEFLGNRQEMTAVV GLSAAALGIYSAKMGTGVMGRY+EARLGRPSLVRETSRRS  E L+HPLQGA+R FKSV+
Sbjct:   65 MERAVQLAFELGRERNPSVLAHERRSKLTKTRAEVSDKTGEFHHWATEADKHIDHKVREEAARMRELKDEHSRAREEFRDRLKRQRAVDKMQLAKLEREKQQEMEQELAXXXXXXXXXXXXXXXXXXQKTELERVKMETEGRILAERKNHDLRLEQKRQQAADTRETVLSGLKLTGETLGQGIAEFLGNRQEMTAVVLGLSAAALGIYSAKMGTGVMGRYVEARLGRPSLVRETSRRSAGEILKHPLQGARRLFKSVK 322
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BLAST of mRNA_D-dudresnayi_contig10539.588.1 vs. uniprot
Match: A0A836C9L2_9STRA (AAA domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L2_9STRA)

HSP 1 Score: 163 bits (412), Expect = 4.410e-43
Identity = 108/246 (43.90%), Postives = 146/246 (59.35%), Query Frame = 1 
Query:    1 MERAVQLSFELGRDRNPAGVAHERRSKLAKARGEAAEKIAEFNHWATEADKHIEHKVREESSRMRDLKDEHGRAREEFRDRLKRQRAVDKMQLAKVEREKXXXXXXXXXXXXXXXXXXXXXXXXXXXQKTELERVKMETEGRILAERKNHDLRIEQKRQQAADTRETVLSGLKLTGETLGQGMAEFLGNRQEMTAVVAGLSAAALGIYSAKMGTGVMGRYIEARLGRPSLVRETSRRSLVETLRHP 738
            +E AV L  E+ R         + R++  K + E  +K+ E   +  +AD+ I  K  EE    R L+ EH + RE+++D+L+R+   D     + +R +                           Q+T+  RVK ETEG ILAERKNHD+R+EQ RQ   ++R+T+L  ++L G TLG G +EFL NRQEMTA V  LSAAALGIY+AK GTGV GR++EARLGRPSLVRETSRRS ++  RHP
Sbjct:    9 LEDAVALMNEMPRGTAGQMRLQQLRTQEYKIQDEHRKKLDEVKEYCRQADQVIRAKEAEEGRSFRKLQGEHEQTREQYKDQLRRKLDADARTYEEQDRCREARMAEEAAAREDQIRRQTLEYAARLRQQTDQLRVKAETEGGILAERKNHDIRMEQLRQDRRESRQTLLESIRLAGATLGGGASEFLANRQEMTAAVVTLSAAALGIYAAKTGTGVAGRFVEARLGRPSLVRETSRRSALDAARHP 254
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BLAST of mRNA_D-dudresnayi_contig10539.588.1 vs. uniprot
Match: A0A835YR91_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR91_9STRA)

HSP 1 Score: 155 bits (392), Expect = 6.010e-40
Identity = 94/196 (47.96%), Postives = 127/196 (64.80%), Query Frame = 1 
Query:  175 EESSRMRDLKDEHGRAREEFRDRLKRQRAVDKMQLAKVEREKXXXXXXXXXXXXXXXXXXXXXXXXXXXQKTELERVKMETEGRILAERKNHDLRIEQKRQQAADTRETVLSGLKLTGETLGQGMAEFLGNRQEMTAVVAGLSAAALGIYSAKMGTGVMGRYIEARLGRPSLVRETSRRSLVETLRHPLQGAKRFF 762
            EE+ +  + + EH + R E+ D+L+R+R VDK+   +  RE+                           QKTEL RVK ETEGRI  ER+NHDLR+E+ R  AA+ R+TVL G+KL GETLG G+  FLG++++M A    L+A ALGIY+AK GTGV GRY+EARLG+PSLVRETS+RS+ E +++P+   KR F
Sbjct:  106 EEARKTLEAQTEHEKRRAEYADQLERKRYVDKINAQRQLREEELKRQEGLVQRQEDLKRKTLEYEAELRQKTELARVKAETEGRIKQERENHDLRLEEARVSAAEYRDTVLEGIKLAGETLGTGIKTFLGDKEKMLAATTTLTAVALGIYTAKTGTGVAGRYLEARLGKPSLVRETSKRSVSEVIKNPIPSFKRAF 301
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BLAST of mRNA_D-dudresnayi_contig10539.588.1 vs. uniprot
Match: A0A6H5LJ37_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LJ37_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 3.290e-39
Identity = 91/188 (48.40%), Postives = 125/188 (66.49%), Query Frame = 1 
Query:  199 LKDEHGRAREEFRDRLKRQRAVDKMQLAKVEREKXXXXXXXXXXXXXXXXXXXXXXXXXXXQKTELERVKMETEGRILAERKNHDLRIEQKRQQAADTRETVLSGLKLTGETLGQGMAEFLGNRQEMTAVVAGLSAAALGIYSAKMGTGVMGRYIEARLGRPSLVRETSRRSLVETLRHPLQGAKRFF 762
            L+ E  + R +F D L+R+R VD++Q  +  R++                           Q+TEL RVK ETEG+I  ER+NHDLR+E+ R+ A + R+TVL G+KL G+TLG G+ EFLG++ +M A  A L+A ALGIY+A+ GTGV GRYIEARLG+PSLVRETSRR+L++T+R+P+   KR F
Sbjct:  128 LQTEEDKKRAQFADELERKRHVDQVQADRYMRDEEMRKQEELTRKQEAVRRKTLEYEAELRQQTELARVKAETEGKIRQERENHDLRLEEAREGAKEYRDTVLEGIKLAGDTLGAGLQEFLGDKDKMVAATATLTAMALGIYTARTGTGVAGRYIEARLGKPSLVRETSRRTLIQTVRNPIPTIKRAF 315
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BLAST of mRNA_D-dudresnayi_contig10539.588.1 vs. uniprot
Match: A0A7S2Y1D4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1D4_9STRA)

HSP 1 Score: 148 bits (374), Expect = 4.360e-39
Identity = 101/212 (47.64%), Postives = 138/212 (65.09%), Query Frame = 1 
Query:  112 KIAEFNHWATEADKHIEHKVREESSRMRDLKDEHGRAREEFRDRLKRQRAVDKMQLAKVEREKXXXXXXXXXXXXXXXXXXXXXXXXXXXQKTELERVKMETEGRILAERKNHDLRIEQKRQQAADTRETVLSGLKLTGETLGQGMAEFLGNRQEMTAVVAGLSAAALGIYSAKMGTGVMGRYIEARLGRPSLVRETSRRSLVETLRHPLQG 747
            K+AE+  +A +++     +  +E+ R  + + EH + R ++RD+L+R+R VD+M   K  RE+      XXXXXXX              QKTEL RV+ ET GRI  ER+NHDLR+EQ R +A + R TVL  +KL GET+G G+  FL + ++M A V  LSA ALGIY+AK+ TGV+GR+IEARLG+PSLVRETSR S++  LR PL  
Sbjct:   87 KVAEYQAYAKQSEIKRVAEEGQEARRTLEAQTEHDKRRAQYRDQLERKRHVDEMNAQKYMREEEVRRQEXXXXXXXAIKRKTLEYEAELRQKTELARVEAETRGRIRQERENHDLRVEQARVEAEEYRNTVLESIKLAGETVGGGIKLFLSDNEKMVAAVGTLSAMALGIYTAKVSTGVLGRFIEARLGKPSLVRETSRTSVLAALRRPLHS 298
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BLAST of mRNA_D-dudresnayi_contig10539.588.1 vs. uniprot
Match: A0A7S2D4S5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D4S5_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.260e-36
Identity = 92/202 (45.54%), Postives = 124/202 (61.39%), Query Frame = 1 
Query:  166 KVREESSRMRDLKDEHGRAREEFRDRLKRQRAVDKMQLAKVEREKXXXXXXXXXXXXXXXXXXXXXXXXXXXQKTELERVKMETEGRILAERKNHDLRIEQKRQQAADTRETVLSGLKLTGETLGQGMAEFLGNRQEMTAVVAGLSAAALGIYSAKMGTGVMGRYIEARLGRPSLVRETSRRSLVETLRHPLQGAKRFFKSV 771
            K  EE  R    K EH +   ++ DRL+R+R V ++   K  +E+                           Q+TEL+RV+ ET+GRI  ER NHDLR+EQ + +A++ R+TVL G+KL G TLG+G   FL ++++M A VA LSA ALG+YSAK+GTGV GRY+EARLG+PSLVRETSR S++  LR P+   KR   S 
Sbjct:   35 KEAEEQRRTLGAKTEHHKEVAKYNDRLERERFVGQLNAKKQLQEQEIKRQDELAERQAALKRKNIEHEAKLRQETELKRVEEETKGRIRQERDNHDLRLEQAKLEASEQRQTVLEGIKLAGSTLGEGARAFLSDKEKMAAAVATLSAIALGVYSAKVGTGVAGRYVEARLGKPSLVRETSRSSVLADLRSPVATMKRIMAST 236
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BLAST of mRNA_D-dudresnayi_contig10539.588.1 vs. uniprot
Match: A0A4D9D134_9STRA (AAA domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D134_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.360e-33
Identity = 98/265 (36.98%), Postives = 140/265 (52.83%), Query Frame = 1 
Query:    1 MERAVQLSFELGRDRNPAGVAHERRSKLAKARGEAAEKIAEFNHWATEADKHIE-------HKVREESSRMRDLKDEHGRAREEFRDRLKRQRAVDKMQLAKVEREKXXXXXXXXXXXXXXXXXXXXXXXXXXXQKTELERVKMETEGRILAERKNHDLRIEQKRQQAADTRETVLSGLKLTGETLGQGMAEFLGNRQEMTAVVAGLSAAALGIYSAKMGTGVMGRYIEARLGRPSLVRETSRRSLVETLRHPLQGAKRFFKSVR 774
            +ERA + + EL +  N        R  L     +   K  E     TE + H++        K  EE+ +  D + EH + R E+RD+L+           K  +E+                           Q+TEL RVK ETEGRI  ER+NHDLR+ Q R +A + RETVL G+KL    LG+G+ EFL +++ +T+    LSA ALG+Y+AK  TGV GRYIEARLG+PSLVR+TSRR+ ++ LR+P+   +R   + +
Sbjct:   53 LERAAKAAKELDKSTNA-------REALKLIELQEVSKQREAEARRTEYEAHVKSLEIQRAQKEGEEARKTLDSQTEHEKRRAEYRDQLEXXXXXXXXNAEKYRKEEELRKQEEYLAKQEAIKRKTLEYEAELRQQTELARVKAETEGRIKQERQNHDLRVAQARAEAKEYRETVLEGIKLASTELGKGLQEFLTDKERLTSAAVTLSAVALGVYAAKTSTGVAGRYIEARLGKPSLVRDTSRRTALQVLRNPVPSLRRLLSTTK 310
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BLAST of mRNA_D-dudresnayi_contig10539.588.1 vs. uniprot
Match: A0A7S2ME04_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ME04_9STRA)

HSP 1 Score: 135 bits (341), Expect = 5.780e-33
Identity = 121/262 (46.18%), Postives = 165/262 (62.98%), Query Frame = 1 
Query:    1 MERAVQLSFELGRDRNPAGVAHERRSKLAKARGEAAEKIAEFNHWATEADKHIEHKVRE-------ESSRMRDLKDEHGRAREEFRDRLKRQRAVDKMQLAKVEREKXXXXXXXXXXXXXXXXXXXXXXXXXXXQKTELERVKMETEGRILAERKNHDLRIEQKRQQAADTRETVLSGLKLTGETLGQGMAEFLGNRQEMTAVVAGLSAAALGIYSAKMGTGVMGRYIEARLGRPSLVRETSRRSLVETLRHP---LQGAKR 756
            +ERA + +  L  D++P   A      L   R +   K  E+    T+ + H EH   E       E+ +    + EH + + +++D L+R+R VDK+Q  +   E+   XXXXXXXXXXXXXXX   XXXXXX  TE++RV+ ET+GRI  ERKNHDLR+EQ R +A + R+TVL G+KL GET G G+  FL ++  M A V  +SA A G+Y+AK+GT V GRYIEARLG+PSL+RETSR SL +++R P   LQ  K+
Sbjct:   46 LERAAKAAKVL--DKSPNAKA-----ALEVIREQERSKQMEYKTQMTQYEAHKEHTKLEKVGLEADEARKTLQSQTEHAKHKAQYQDELERKRYVDKLQAQQQLHERELKXXXXXXXXXXXXXXXNIAXXXXXXXXTEMKRVEEETKGRIKQERKNHDLRLEQARIEAEEQRQTVLEGIKLAGETFGAGVRGFLSDKDRMLAAVGTVSAIAAGVYTAKVGTSVAGRYIEARLGKPSLIRETSRISLTQSIRRPWTLLQSGKK 300
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BLAST of mRNA_D-dudresnayi_contig10539.588.1 vs. uniprot
Match: A0A812RI14_SYMMI (Atad3 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RI14_SYMMI)

HSP 1 Score: 128 bits (322), Expect = 1.490e-30
Identity = 88/205 (42.93%), Postives = 132/205 (64.39%), Query Frame = 1 
Query:  166 KVREESSRMR---DLKDEHGRAREEFRDRLKRQRAVDKMQLAKVEREKXXXXXXXXXXXXXXXXXXXXXXXXXXXQKTELERVKMETEGRILAERKNHDLRIEQKRQQAADTRETVLSGLKLTGETLGQGMAEFLGNRQEMTAVVAGLSAAALGIYSAKMGTGVMGRYIEARLGRPSLVRETSRRSLVETLRHPLQGAKRFFKSV 771
            KV+EE    R   D + +H RAR E++D+L+R R  D+++  K E+ +   XXXXX XXXX              Q+TE  RVK ETEGRI  ER NHDL ++ KR +A + R+T+L  +KL+  T+G G+ EF+ +R+++      L+  A G+Y+A++ TGV+GRY+EARLG+PSLVRET++R++++ LR P+   +  F S 
Sbjct:   77 KVQEEEEAARRTLDAQTQHDRARAEYKDKLERTRLADQIRAQKDEQAEERAXXXXXLXXXXAIRRKTLEYEAELRQQTEKARVKAETEGRIQQERVNHDLVLDNKRLEAKELRDTILESIKLSSSTIGAGLKEFISDREKLINTTITLTGIAFGLYTARVSTGVVGRYVEARLGKPSLVRETTKRNVLQALRSPVSSFRLAFGSA 281
[Close]
BLAST of mRNA_D-dudresnayi_contig10539.588.1 vs. uniprot
Match: A0A024UQX3_9STRA (AAA domain-containing protein n=11 Tax=Aphanomyces TaxID=100860 RepID=A0A024UQX3_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.710e-30
Identity = 70/124 (56.45%), Postives = 92/124 (74.19%), Query Frame = 1 
Query:  385 KTELERVKMETEGRILAERKNHDLRIEQKRQQAADTRETVLSGLKLTGETLGQGMAEFLGNRQEMTAVVAGLSAAALGIYSAKMGTGVMGRYIEARLGRPSLVRETSRRSLVETLRHPLQGAKR 756
            KTE+ +V  E EGRI  ER NHDL +E+ R +A + RETV+ G+KL   T+G G+  FLG+ +++TA V  LS  ALG+Y+AK+ TGV GRYIEARLG+PSLVRETSRRS+V+ L +P+   KR
Sbjct:  169 KTEMAKVAAEVEGRIKQERLNHDLHLEEARVRAKEYRETVMEGIKLATNTIGTGVMAFLGDSEKLTATVVSLSVLALGVYTAKVSTGVTGRYIEARLGKPSLVRETSRRSIVQVLANPIPSIKR 292
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10539.588.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW02_ECTSI9.360e-12084.50AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836C9L2_9STRA4.410e-4343.90AAA domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A835YR91_9STRA6.010e-4047.96AAA domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6H5LJ37_9PHAE3.290e-3948.40AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2Y1D4_9STRA4.360e-3947.64Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2D4S5_9STRA1.260e-3645.54Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A4D9D134_9STRA1.360e-3336.98AAA domain-containing protein n=3 Tax=Monodopsidac... [more]
A0A7S2ME04_9STRA5.780e-3346.18Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A812RI14_SYMMI1.490e-3042.93Atad3 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A024UQX3_9STRA1.710e-3056.45AAA domain-containing protein n=11 Tax=Aphanomyces... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10539contigD-dudresnayi_contig10539:281..7221 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score367.1
Seed ortholog evalue6.8e-99
Seed eggNOG ortholog2880.D7FW02
Preferred nameATAD3A
KEGG koko:K17681
GOsGO:0001558,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005886,GO:0006810,GO:0006887,GO:0006955,GO:0006996,GO:0007005,GO:0008150,GO:0009987,GO:0010941,GO:0012505,GO:0012506,GO:0016020,GO:0016043,GO:0016192,GO:0030141,GO:0030659,GO:0030667,GO:0031090,GO:0031410,GO:0031982,GO:0032940,GO:0036230,GO:0040008,GO:0042119,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043299,GO:0043312,GO:0044422,GO:0044424,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046903,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051179,GO:0051234,GO:0060548,GO:0065007,GO:0070820,GO:0071840,GO:0071944,GO:0097708,GO:0098588,GO:0098805,GO:0099503,GO:0101002,GO:0101003
EggNOG free text desc.mitochondrion organization
EggNOG OGsCOG1223@1,KOG0742@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03029
Hectar predicted targeting categoryother localisation
Exons7
Model size774
Cds size774
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927556.9224217-CDS-D-dudresnayi_contig10539:280..4481622927556.9224217-CDS-D-dudresnayi_contig10539:280..448Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10539 281..448 +
1690556806.0911088-CDS-D-dudresnayi_contig10539:280..4481690556806.0911088-CDS-D-dudresnayi_contig10539:280..448Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10539 281..448 +
1622927556.9401808-CDS-D-dudresnayi_contig10539:1402..14711622927556.9401808-CDS-D-dudresnayi_contig10539:1402..1471Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10539 1403..1471 +
1690556806.1046953-CDS-D-dudresnayi_contig10539:1402..14711690556806.1046953-CDS-D-dudresnayi_contig10539:1402..1471Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10539 1403..1471 +
1622927556.9591944-CDS-D-dudresnayi_contig10539:2242..23231622927556.9591944-CDS-D-dudresnayi_contig10539:2242..2323Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10539 2243..2323 +
1690556806.1161718-CDS-D-dudresnayi_contig10539:2242..23231690556806.1161718-CDS-D-dudresnayi_contig10539:2242..2323Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10539 2243..2323 +
1622927556.971722-CDS-D-dudresnayi_contig10539:3245..33951622927556.971722-CDS-D-dudresnayi_contig10539:3245..3395Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10539 3246..3395 +
1690556806.1329598-CDS-D-dudresnayi_contig10539:3245..33951690556806.1329598-CDS-D-dudresnayi_contig10539:3245..3395Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10539 3246..3395 +
1622927556.996199-CDS-D-dudresnayi_contig10539:4248..43531622927556.996199-CDS-D-dudresnayi_contig10539:4248..4353Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10539 4249..4353 +
1690556806.1439276-CDS-D-dudresnayi_contig10539:4248..43531690556806.1439276-CDS-D-dudresnayi_contig10539:4248..4353Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10539 4249..4353 +
1622927557.01144-CDS-D-dudresnayi_contig10539:4800..48931622927557.01144-CDS-D-dudresnayi_contig10539:4800..4893Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10539 4801..4893 +
1690556806.1582696-CDS-D-dudresnayi_contig10539:4800..48931690556806.1582696-CDS-D-dudresnayi_contig10539:4800..4893Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10539 4801..4893 +
1622927557.0229995-CDS-D-dudresnayi_contig10539:7113..72211622927557.0229995-CDS-D-dudresnayi_contig10539:7113..7221Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10539 7114..7221 +
1690556806.1682868-CDS-D-dudresnayi_contig10539:7113..72211690556806.1682868-CDS-D-dudresnayi_contig10539:7113..7221Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10539 7114..7221 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10539.588.1prot_D-dudresnayi_contig10539.588.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10539 281..7221 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10539.588.1

>prot_D-dudresnayi_contig10539.588.1 ID=prot_D-dudresnayi_contig10539.588.1|Name=mRNA_D-dudresnayi_contig10539.588.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=258bp
MERAVQLSFELGRDRNPAGVAHERRSKLAKARGEAAEKIAEFNHWATEAD
KHIEHKVREESSRMRDLKDEHGRAREEFRDRLKRQRAVDKMQLAKVEREK
QQEMEQELAARQEQIRRETIELEAQLRQKTELERVKMETEGRILAERKNH
DLRIEQKRQQAADTRETVLSGLKLTGETLGQGMAEFLGNRQEMTAVVAGL
SAAALGIYSAKMGTGVMGRYIEARLGRPSLVRETSRRSLVETLRHPLQGA
KRFFKSVR
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mRNA from alignment at D-dudresnayi_contig10539:281..7221+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10539.588.1 ID=mRNA_D-dudresnayi_contig10539.588.1|Name=mRNA_D-dudresnayi_contig10539.588.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=6941bp|location=Sequence derived from alignment at D-dudresnayi_contig10539:281..7221+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGAAAGGGCGGTGCAGCTTTCCTTCGAACTGGGGAGGGACCGCAACCC
CGCCGGCGTGGCGCATGAGCGGCGATCGAAGCTTGCCAAGGCCAGGGGGG
AGGCCGCCGAGAAAATAGCCGAATTCAACCACTGGGCTACGGAGGCCGAC
AAACACATCGAACACAAGGTTTTGAGACCCGCTGCTGCGTTTCTGCTTGT
CTGCATATAGCGGGGAGGGAAGGAGAGAGGGAGGATATATATATATTTTT
GTATCCCATGAGTTGGTTGTGGCATCCTACTCTACATTATACATGTAATA
TAATCAAAGCCACTACTGAAGTGGTGCATGAGATCAGTGGTCCAACTGGC
GACTGCCAAGTTGACTGTAGTTCGGGGGTTCGAATCTCGGTAAGTAGACT
CTTTTTTTTGTTTTTGTGTTTGTTTTGGTCTGGTGCCACTGTTTGCGGGA
AGCGGAACAGCATGAGTAAGAAAAACAACAAATGATGACGGTGGGCGAGC
TGCGGGGGGGGAGTGCAGGAACCTACGATTGTGTGATAAATATTCAAATA
AAGGCATGAGTCGGGGGGGGTGGGGGATGAACCCTTAAGACCACGGGCAT
CACAGAACGCTACTGGTAGGGACCTAGAGGTGCGATATAAGTATGATAGG
CCATGTGATGACGCAACTCTTCAAATGATAGCTGTATATAACTGCGTGGG
AGAGCGGTTTTGCAAGGCGGTGGGAGGCTTTATGCACCGAAAGGGAACGG
GTACGATTGGTGACTTGTTTTTGTGTTTGTGATGTTTTTGTGTTTTGTTT
GCTGCGTGTGGTGAAAAGGGGCTGACTTGTGCAAGCTATGGCATGTCGTG
ACTGAACGCAGCTGATGTGACTTGTAAAAATAAAATGGTCAGGCAGGGCA
GCGTGCCTGCGCACCTATGTATTCTACTGTAGGCAACAACGAGTGATTGT
ATATTTCATCGTTTGTATTTTTTTTTTGCCCTTCCGAGACGTTGTTTCTA
TGTGAGCCTGCTTTGTGACGACGGGCTGATTCATGGCATTGACGAGGTCG
TAAAATGTGAGAAAAATCGTCATCATCACGGTGTTCCATTTTAATTTGTT
TGTCGCGATTTTTGACGCACAGGTGCGGGAAGAGAGCTCGCGGATGCGAG
ACCTGAAGGACGAGCACGGCAGAGCCCGAGAAGAGTTCAGGGTAAGGAGG
CGGTGGGAGACTGGAAAGGAAGGGGGGCGGGGTGGGGGGAGTACTTGGTT
CTCTTAGCTTTTTGTTTTGTTGGATTTTTGTTAACAGTAAATGTGATATA
CACGTTGCTATGCGGTGTCGTCAAGGTGTGGAGGAGGTCACCGTTGGTGC
CGAAGACTGATTGATGTCTACCGTGTTTTTTGTGTGTACGATAGTAGGCG
TTGTTAGGATGGTGTACTCAGTTGACCGATGGGTTTAGGTTGGTCGTTCG
ACCTGTTGCCCGAGCAGGCGCTGGTGGTGCTGAGTTGGCGATGCTTGTGA
CTGCGTGTGCCATGGTGTTCGATAATGGGGGGAAGGGGGGGGGGGTATGT
ACATGATGCTTTTGTTTGGTGAAGGGTTGGGGCAGGGCGGCGTAGCTCAT
GTTTTTTTTGTTGTTGTCGTCCCCGTTTTGCTCTCGGATTGCGCATTCCC
GGAGATACTGATTGAGTCGAGGAGTGGGGAGGAGATAGGGGGCGGGGGCG
GGGACGGGGATGCGTTATTGTACAACTCTCTCTCTCTTAGCGTTATCTAC
TCTTGGTGTGCCTGGTTGCTTTCGAAGCCAACGGTGGGTCATTGTTAACC
ATTAGCTTTTTTGTTTTGTTTTGCAGCCTGCGAGCACATCTTTTTCTTTT
CTTTTCGTGTACGTGTTGTTGTTTTTTTTAATATTTACTTGCGTTTTGCC
TCGCCGCTGTGCATTGGCTTCTTGTGTCTTGTGCGCTGGTTTATGTTTGT
TTGCCCCGCTAGGATCGTCTGAAGCGGCAGCGAGCGGTGGACAAGATGCA
GCTGGCCAAGGTTGAACGCGAGAAGCAGCAGGAGATGGAACAGGTATATA
CATTGGATGATATATCATTAAAGAGGCACTTTTTTTTTTATATAGGCTGG
CTCGTGATGCGCGCGTGACGAGGTAGGAGAGGGGTATCATCGTTTCGTTT
CTTGCTGGAAAAATGCAGAGCGAGAGGTGCTTGCCTCGCTTGCTTGCTGT
ACATGCCTGCCATTTTTTATTTGGTATATGTTTTTTTTTCTTCCTTGGAT
TCGTTTCATTGTGTGTCCTTTCATCTTACCTGTGTTTCTGTCCTACTTGT
GTTTTTTTGCGTTTCTTCTTTTGTGATACCTTTCTCATTTTTTTTTTTTT
TTCAATTTTTTATTTCCGGTGCTCTATGTAATTCGTGACGACGGAATTTC
GAAATCTAGCCATGATAGGATGGAATAATCAGTACAGACTCTTCTGAGTA
AGCTGCTGGATGTCGTAGGGTAGAAACTGACGATTTTTAGACAACGGCAA
CAAGAACTAGTATATACTATTTGGCGATTTACAGATAACAACAGGGGTGG
CGCAGTGGTCTAATGGTTAGGGTGTTGCCTCTGTTGGCGGAAGTTGGGGG
TTCGATTCCCGGTGGCACTTTTTTGTGCCATCTTCCGTCGTGGAAAACGC
GAGAGCGTGAATAAGCACAATTCGATGAAAGTCGACGAGGGAAGAAAGTG
CTACACTCTTCTCGAGATAAAAATGTAGGCACGTACCGTAGTGGGAATAA
GAGAGGAGAGGCTACTAAGTGACCCCGGATCTGAGTTACGAAGAGAGATT
GAGCTAGAGAAAGAATATAGCGAAGATAATAAATGAGACGAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAATGCGCGGTGCAACACAGGTTTTTATTTCGTTTTTTGTT
GGTTGGTCGCGTCAGGAGCTCGCGGCGAGACAGGAGCAGATCAGACGGGA
GACGATAGAGTTAGAGGCCCAGCTGAGGCAGAAGACGGAGCTGGAGAGGG
TCAAGATGGAGACGGAGGGGAGGATACTGGCGGAGCGCAAGAATCACGAC
CTTCGCATCGAGCAGGTTTGCGGGCTTCAGGCTTGACTGCTGCTGCTGCT
GTATAGTCTACATACAGTAGTACAGCAGAAGTGCTGTACTTAGGTATAAT
ATCAACAGTAATGTATCAACACTTCGTGTAGTCTTATTGTTGCTTATATA
CGGTATTTGTTTACGAGTAAAAATATTCAAAGGAAACATTCAACATTCAT
CATTTTGGTGCGTTAATTATGATACCGGTAGTTATTTATTGGGAGTAGTT
GGGGAGGAACATGTAGAGCTGTATTTTCTCTTTAGTTTGTGTGTGTGTGC
GTGTTTTATCCGTCACTTTATCGGTCCAGTTCAGCTCATTGGTGCTCGTC
GCTCAGCGTGCCTGTCTTTGTAAGCCGTGGTCACAGATCTCGATCGGATA
AAACGTTATACTAACCCCGAACTTTCGCCAACAGGGGCAAGTACCTAGAC
CACTGACCTACTTGCGTCGGTTCTCCAAACTTTCGTTCGTGGAGAGGTCC
GTTCCCGAGAGACTCAAGAGCCCGGCGTTGCTATGAATAATACGTCTTTG
CCGTTCAGTTGTATCCTTGTAAAGTGGACCTACTGATTTCTTCACTCCTT
ATTATTGACGTACCTGTTGTTTTTAGAGCTTTAGACTCGATTTTGGTTTG
GTCTGGTTTCGTATATATATATTTTTGTAGCGTTTTTTGTGTTTAGTATG
TGTGTGTTTTGTGTTTTGTTTCGGGTACTAGTATTGTAAACGTGTGCGTG
TTTTTGTGTGCGGGTATCCTGTAGGCCGGCGTAGTCGCTGGGTTTGTACC
CTCTGCTAACAACACCCTGTTTATAATGCCTGTTGCGTGCTTGCCCTGGT
TTGATTTGGGGTTTGCAGAAGAGGCAGCAGGCGGCCGACACAAGGGAGAC
GGTGCTGTCCGGTCTGAAGCTGACGGGGGAGACGCTCGGGCAGGGAATGG
CTGAGTTCCTCGGCAACCGACAGGTACGTTTTGTTTCCCTTGCCGTGATT
TATTTTTATGAACGTCCATATGTTGAGGTATACGATGTAGTATGTAGTAG
ACCTCTTGCTTGCTTGCCTGCCTGCTGGTGTTCTTTTGGATGTGGGGGTG
GTGTACTACCGCTGCTGTTGCTGCCGCTGGCGTGCGTGTTGTGTTGCTGT
TGTTGCCTTTGTTTCTCACATTAGCTCATCTCAAAAAAATATCGCCCGTG
GTCACAAAACCCGGCACAGCAACGCTCCAGAAGGAAAAACAAAGAAAAAT
AAAGCACGCAAAACATACATAAGAGGAAGAGCATTTTTCGTACACCGTTC
GCGGAATATTTACGTGGATGACGTGCGACGAGCGTTGTGCGATGTTTTTT
GTGTTGACGCCCCCCCCCCCCCCCCCTCCTACTACTGCCCCCCGTCCTCT
ACCGCGTTGGTGTTTTGCAGGAGATGACGGCTGTAGTGGCGGGACTGTCC
GCCGCAGCGTTGGGTATCTACTCCGCTAAGATGGGCACCGGCGTCATGGG
CCGGTACATCGAGGTGAGGCTTATCACATCTCTCGGGTCCCCTCTTACCC
TGTAGTAGAGGTGTTAATAGTAAGTCGGCTTTGCTTTCTATATTTCTGTG
AGCGTTGTTGTTGTTGTTTCTCACATTAGCTAATCTCAAAAGATCTCGGC
CGTGGCCTCAAAAACTTTCTATGTTTCTGTTAGCGTGCCTTGTTTTGTTT
CGTTTTCTTTTGTTTTTGTGTAGTGTATGGGCGGATGCATGCCCTGATGT
ATGCTTGCTTCTTCCAACTTTTTTCAGGAAACACTGTCTTGCTTTTTGTG
ATGTCGTGCCTGGACCGTGAGATTTTAGTGTTTTTTTATTTGGCGGAATA
AAACTCGCCTCACGAGGTACCCTAGACTTGACTGTGATTGATCGATTTGA
TTGATTATAGTTTTAATTTGATTTGATTTGTTTGGCCTATTTAATCGTGG
ACTCCATCGTTACGAGGCAGACAGTTATGCGAAACTGAGAAAACTAGAAC
ACTGCCGTAGCGTACAGTGTTAAAAATAGGCGAGAGGCCCATGTTGTGCG
CAGCGAAACACGCGCCGAAGGCGTGTCGGGCCGCCGGAGGCTAAATTTTT
GCGTATATGCGTAAAAATACTCCCGAAAATCCCTTCAAAATGTGCGTGTT
GCCGTCTCCTTTACCCTCGAGTAGGTTTGCGTGTTGCGCACAAGACGGAG
CAATTCAAGGCTAGAGTTACGATCACGATCGGATCCTAGTTCTTATGTTG
TCGTCGAAACTCGAAGCTAAACAGTTGAACCTCCGTTGAAGCATTGAAAC
ATTGAAGTCGGTTGGTATCCGATTGCTAATTATTTTCGTTCAGCGTGCTG
CTTCCCGAAATTATAAATACAAAGATACCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCTCCCCCCTCCCGTATCTCCCCCCTATA
ACAAAAAAAACCCCCCCCCCCACACCACCCCCCTCCCCCCTTCAGCCCGA
AACCTCACTGTTTCGATGCTATGAATACCATCAATCTTAAAAAACTATAC
CGTCCCGGCAGCAACCTCTTCTTCGTCTTCGTTAACTTGCGCCTTCTGAA
GGCTGCATCGTGGTCGAAAACTACAGCCGCTTCTCTGAGGATATCGTTGG
ACGATTCAGCCGTGAGGTCAACGCCTTGCTGCCTGTTGCAACAAAGAGAG
CCGCATCAACAGCTCGAGTCGCTCCACTGAAAGCTTGTTTCCGGGGGTTG
GATTTAATCCTGTTTTGAGCCGAGAACCCGCGCTCACACTCGATAGACGA
GTGCGGCTGCACAATGTAGATTTTGACGAGCTTGTGCAGGTTCGGGAAAC
GATCACCCCCGTACGAGCTGTTAACCTTGCGCAGATCTACCCCCGCGGAG
GGTTTCCATATATTCAGGCGGCGTTTATGACTCGGGGCCGCTAGTTTTTG
GCTTTACCTAATTTTGAAACCTGTTTCGTCGTGTGTGTGTGTTTGTGGTG
TGTATGTGTATCACACAGTGTGTGTGTCGGTGTCACGGGTCCGTTTGGCC
TGCTTACGTCTATTCCAGAGATGACCTGCAAGCAATTGCAATTGTAACTA
ATTTTATAAAGGATTACAACAGAAATAAGCCCGAAGCCCAAGAAGGAGCA
AAGGGGCTCAAAAAAAAAATTCGCCTACGGAAAAAAAACATCACAACTCA
CGACACAGAGAAAAAGGGCCTCAAAACATTTTTCGCTTGCGGCGAAAACA
TCACAAAACCTAAAAACAAAAGGCTAAAAAAAAAAAGATATCGCCTCCGG
CGAAAAAACCGCCGCAACACTTTTCTCGCCTGCGCTGTTGCAGAGTGGAA
CACACGAAAAAAGACGCGGTGCAAAATATTCCTGGGTGTGCAAACGGGAG
CAAGAACATGGACTCCCGGAGGGTAGTTCGTGCACTATATGCACCTCTCT
GTTAGTATACTAGCGTATGAGGGTGAGGAAGATAAGGTTAGGGATTTTAA
TACTAATTGTAGTATAGGAGATGCGTACATGATCGAACCTCCGGAGGTTC
ATTCACATACGCTACCAGTGTTAAAATAAGGCGTTGGGCTGTTGCGCCAG
CGCAACTCGCGATTTGAGGCCGCAACTTTTCTCGCCGCAGGCGAGAAAAG
TGTGGCGGCGTTTTTTTCGCCGGAGGCGATATCTTTTTTTTTTGAGCCTT
TTGTTTTTGTGTGTGTGACCTGCGCTGTTGCAGGCGAGACTGGGGCGACC
GTCGCTTGTCCGAGAGACCTCGCGCCGTTCCTTGGTGGAGACCCTGAGGC
ATCCGCTGCAGGGGGCGAAGCGGTTTTTCAAATCGGTCAGG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10539:281..7221+

>mRNA_D-dudresnayi_contig10539.588.1 ID=mRNA_D-dudresnayi_contig10539.588.1|Name=mRNA_D-dudresnayi_contig10539.588.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1548bp|location=Sequence derived from alignment at D-dudresnayi_contig10539:281..7221+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGAAAGGGCGGTGCAGCTTTCCTTCGAACTGGGGAGGGACCGCAACCC
CGCCGGCGTGGCGCATGAGCGGCGATCGAAGCTTGCCAAGGCCAGGGGGG
AGGCCGCCGAGAAAATAGCCGAATTCAACCACTGGGCTACGGAGGCCGAC
AAACACATCGAACACAAGATGGAAAGGGCGGTGCAGCTTTCCTTCGAACT
GGGGAGGGACCGCAACCCCGCCGGCGTGGCGCATGAGCGGCGATCGAAGC
TTGCCAAGGCCAGGGGGGAGGCCGCCGAGAAAATAGCCGAATTCAACCAC
TGGGCTACGGAGGCCGACAAACACATCGAACACAAGGTGCGGGAAGAGAG
CTCGCGGATGCGAGACCTGAAGGACGAGCACGGCAGAGCCCGAGAAGAGT
TCAGGGTGCGGGAAGAGAGCTCGCGGATGCGAGACCTGAAGGACGAGCAC
GGCAGAGCCCGAGAAGAGTTCAGGGATCGTCTGAAGCGGCAGCGAGCGGT
GGACAAGATGCAGCTGGCCAAGGTTGAACGCGAGAAGCAGCAGGAGATGG
AACAGGATCGTCTGAAGCGGCAGCGAGCGGTGGACAAGATGCAGCTGGCC
AAGGTTGAACGCGAGAAGCAGCAGGAGATGGAACAGGAGCTCGCGGCGAG
ACAGGAGCAGATCAGACGGGAGACGATAGAGTTAGAGGCCCAGCTGAGGC
AGAAGACGGAGCTGGAGAGGGTCAAGATGGAGACGGAGGGGAGGATACTG
GCGGAGCGCAAGAATCACGACCTTCGCATCGAGCAGGAGCTCGCGGCGAG
ACAGGAGCAGATCAGACGGGAGACGATAGAGTTAGAGGCCCAGCTGAGGC
AGAAGACGGAGCTGGAGAGGGTCAAGATGGAGACGGAGGGGAGGATACTG
GCGGAGCGCAAGAATCACGACCTTCGCATCGAGCAGAAGAGGCAGCAGGC
GGCCGACACAAGGGAGACGGTGCTGTCCGGTCTGAAGCTGACGGGGGAGA
CGCTCGGGCAGGGAATGGCTGAGTTCCTCGGCAACCGACAGAAGAGGCAG
CAGGCGGCCGACACAAGGGAGACGGTGCTGTCCGGTCTGAAGCTGACGGG
GGAGACGCTCGGGCAGGGAATGGCTGAGTTCCTCGGCAACCGACAGGAGA
TGACGGCTGTAGTGGCGGGACTGTCCGCCGCAGCGTTGGGTATCTACTCC
GCTAAGATGGGCACCGGCGTCATGGGCCGGTACATCGAGGAGATGACGGC
TGTAGTGGCGGGACTGTCCGCCGCAGCGTTGGGTATCTACTCCGCTAAGA
TGGGCACCGGCGTCATGGGCCGGTACATCGAGGCGAGACTGGGGCGACCG
TCGCTTGTCCGAGAGACCTCGCGCCGTTCCTTGGTGGAGACCCTGAGGCA
TCCGCTGCAGGGGGCGAAGCGGTTTTTCAAATCGGTCAGGGCGAGACTGG
GGCGACCGTCGCTTGTCCGAGAGACCTCGCGCCGTTCCTTGGTGGAGACC
CTGAGGCATCCGCTGCAGGGGGCGAAGCGGTTTTTCAAATCGGTCAGG
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