prot_D-dudresnayi_contig9864.28676.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig9864.28676.1
Unique Nameprot_D-dudresnayi_contig9864.28676.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length199
Homology
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BLAST of mRNA_D-dudresnayi_contig9864.28676.1 vs. uniprot
Match: D7G930_ECTSI (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G930_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 3.940e-45
Identity = 127/199 (63.82%), Postives = 130/199 (65.33%), Query Frame = 0 
Query:    1 PVSAAALSLLLRRGEVDGMTMAWTTGMDKWKPLGEVSELRALLQGDDXXXXXXXHNDEQGAAGLGVPDMMVFQADEAGQQPAYEPPPKKESKRSFMADDGTKFAWDEEKGDXXXXXXXXXXXXXXXXXXXXEPSWKIRRAKQQAKXXXXXXXXXXXNGQQPNGTTAVASSEDKGDDKDDADVDPDTAHWGELLEDAKRE 199
            PVSAAALS LLR+GEVDGMTMAWTTGM  WKPLGEVSELR LLQ  DXXXXXXX      A       MMVF+AD+   QPAYEPPPKKESKRSFMADDGTKFAWDEEKGD        XXXXXXXXXXXX   WKIRRAKQQAK           N     G                    PDTAHWGELLEDAKRE
Sbjct:  141 PVSAAALSRLLRQGEVDGMTMAWTTGMGDWKPLGEVSELRPLLQDGDXXXXXXXXXGTDDAPEK----MMVFEADDEA-QPAYEPPPKKESKRSFMADDGTKFAWDEEKGDWKEVEGDEXXXXXXXXXXXXP--WKIRRAKQQAKLKAKSKEDKKANRDAAAGQKGXTXXXXXXXXX----XXPDTAHWGELLEDAKRE 328
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BLAST of mRNA_D-dudresnayi_contig9864.28676.1 vs. uniprot
Match: A0A7S0Q6W3_9EUKA (Hypothetical protein n=3 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q6W3_9EUKA)

HSP 1 Score: 54.3 bits (129), Expect = 3.090e-5
Identity = 24/41 (58.54%), Postives = 30/41 (73.17%), Query Frame = 0 
Query:    2 VSAAALSLLLRRGEVDGMTMAWTTGMDKWKPLGEVSELRAL 42
            VS   L  +LRRG++DG+T  W TGM +WK LG+V ELRAL
Sbjct:   28 VSTEQLVTMLRRGDLDGLTAVWRTGMAEWKELGQVDELRAL 68
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9864.28676.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G930_ECTSI3.940e-4563.82RRM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S0Q6W3_9EUKA3.090e-558.54Hypothetical protein n=3 Tax=Coccolithus braarudii... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 137..157
IPR025640GYF domain 2PFAMPF14237GYF_2coord: 1..39
e-value: 1.5E-9
score: 37.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9864contigD-dudresnayi_contig9864:2008..5865 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9864.28676.1mRNA_D-dudresnayi_contig9864.28676.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig9864 2008..5865 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig9864.28676.1 ID=prot_D-dudresnayi_contig9864.28676.1|Name=mRNA_D-dudresnayi_contig9864.28676.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=199bp
PVSAAALSLLLRRGEVDGMTMAWTTGMDKWKPLGEVSELRALLQGDDDDD
GEEDHNDEQGAAGLGVPDMMVFQADEAGQQPAYEPPPKKESKRSFMADDG
TKFAWDEEKGDWQQVEGDEEEELEDEEEEVEEPSWKIRRAKQQAKAKAKA
KEQKSKNGQQPNGTTAVASSEDKGDDKDDADVDPDTAHWGELLEDAKRE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025640GYF_2