prot_D-dudresnayi_contig982.28623.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-dudresnayi_contig982.28623.1
Unique Name	prot_D-dudresnayi_contig982.28623.1
Type	polypeptide
Organism	Desmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length	102

Homology

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BLAST of mRNA_D-dudresnayi_contig982.28623.1 vs. uniprot
Match: A0A448ZAU0_9STRA (Tr-type G domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZAU0_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 8.500e-8
Identity = 37/101 (36.63%), Postives = 57/101 (56.44%), Query Frame = 0

Query:    6 YIQGTAKVLKVYTFSGARAQV-VAGLQVISGRL-RTKTSNSASDSTSSGYVYRITRNGKVVLPESRSDT--ELKRMKATVNEVENGLECGLTLSGYSDFQE 102
            +  G AKV  +++      +  +AGL V+ G + R K     SD+      +R+ RNG+++ P+  S T   L++ K TV  V+ G ECGL LSG+SDF+E
Sbjct:  956 HTHGRAKVKAIFSIDTEDGEERIAGLNVLDGNMYRAKGPAGGSDTIDLPSHFRVYRNGELISPDDESVTASSLRKFKETVESVKLGEECGLGLSGFSDFEE 1056

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BLAST of mRNA_D-dudresnayi_contig982.28623.1 vs. uniprot
Match: A0A1E7ER04_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ER04_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 1.190e-5
Identity = 35/101 (34.65%), Postives = 57/101 (56.44%), Query Frame = 0

Query:    6 YIQGTAKVLKVYTFSGARA-QVVAGLQVISGRL-RTKTSNSASDSTSSGYVYRITRNGKVVLP--ESRSDTELKRMKATVNEVENGLECGLTLSGYSDFQE 102
            +  G A V  V+T       + VAGL V++G + ++K     S +T     +R+ R+ +++ P  ES + + L+R K  V+ V  G ECGL LSG++DF+E
Sbjct:  453 HTHGRASVKAVFTIGTINGDEKVAGLNVMNGNIYKSKAPAGDSSTTDLDCHFRVYRDSQLISPVGESVTASSLRRFKELVDSVRLGDECGLALSGFTDFEE 553

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BLAST of mRNA_D-dudresnayi_contig982.28623.1 vs. uniprot
Match: A0A2E6T143_9BACT (Translation initiation factor IF-2 n=2 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2E6T143_9BACT)

HSP 1 Score: 50.1 bits (118), Expect = 7.900e-5
Identity = 39/97 (40.21%), Postives = 52/97 (53.61%), Query Frame = 0

Query:    7 IQGTAKVLKVYTFSGARAQVVAGLQVISGRL-RTKTSNSASDSTSSGYVYRITRNGKVVLPESRSDTELKRMKATVNEVENGLECGLTLSGYSDFQE 102
            + G A+V K++  S  +   VAG  VISG++ R K               R+ R G +V  E  S T LKR K  VNEV +G+ECG+ L G+ DFQE
Sbjct:  670 VTGQAEVRKIFELS--KGGNVAGCAVISGKIVRGK--------------MRVVRKGNLVY-EGISHT-LKRFKDEVNEVRSGMECGIRLDGFDDFQE 748

The following BLAST results are available for this feature:

BLAST of mRNA_D-dudresnayi_contig982.28623.1 vs. uniprot

BLAST of mRNA_D-dudresnayi_contig982.28623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A448ZAU0_9STRA	8.500e-8	36.63	Tr-type G domain-containing protein n=1 Tax=Pseudo...	[more]
A0A1E7ER04_9STRA	1.190e-5	34.65	p-loop containing nucleoside triphosphate hydrolas...	[more]
A0A2E6T143_9BACT	7.900e-5	40.21	Translation initiation factor IF-2 n=2 Tax=Verruco...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.30.10		coord: 5..102 e-value: 5.3E-14 score: 54.1
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 8..102

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-dudresnayi_contig982	contig	D-dudresnayi_contig982:2018..2457 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-dudresnayi_contig982.28623.1	mRNA_D-dudresnayi_contig982.28623.1	Desmarestia dudresnayi DdudBR16 monoicous	mRNA	D-dudresnayi_contig982 2018..2457 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-dudresnayi_contig982.28623.1 ID=prot_D-dudresnayi_contig982.28623.1|Name=mRNA_D-dudresnayi_contig982.28623.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=102bp
MLSCVYIQGTAKVLKVYTFSGARAQVVAGLQVISGRLRTKTSNSASDSTS
SGYVYRITRNGKVVLPESRSDTELKRMKATVNEVENGLECGLTLSGYSDF
QE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009000	Transl_B-barrel_sf