prot_D-dudresnayi_contig9715.28494.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig9715.28494.1
Unique Nameprot_D-dudresnayi_contig9715.28494.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length223
Homology
BLAST of mRNA_D-dudresnayi_contig9715.28494.1 vs. uniprot
Match: A0A6H5JU59_9PHAE (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU59_9PHAE)

HSP 1 Score: 251 bits (640), Expect = 2.810e-80
Identity = 138/199 (69.35%), Postives = 152/199 (76.38%), Query Frame = 0
Query:    1 MAAEEAKVVGAVPPPPAYYKLFAP-------------------DAHGAAGDGTASAFPLEPPRPPGPGETYRMFGMPYSSEPITEELLPPEKIVTPISDRAIDFRKELKTLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLLLEWLRSQNQQNADVASALEAAMRECESAHEGAIASL 180
            MA EEAKVV AVPPPPAYYKLF+P                   D+ G AG    + FPL+PPRPPGPGETYRMFGMPYSSEP+ +ELLPPEKIV P S +AIDFR  LK LLNSIMANYGQFMEMLVSSP+RAHEKLSDVETLFVNFHSLLNRYRAHQARH++LE LRSQ ++N  V S LEAAM +C SA E A + L
Sbjct:    1 MATEEAKVVDAVPPPPAYYKLFSPGASLTGQDVGASAAIAAPGDSAGGAGGTAPNEFPLQPPRPPGPGETYRMFGMPYSSEPVEQELLPPEKIVVPASGQAIDFRAGLKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAEENDAVMSTLEAAMHQCTSAQESAFSCL 199          
BLAST of mRNA_D-dudresnayi_contig9715.28494.1 vs. uniprot
Match: D8LAU4_ECTSI (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU4_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 9.440e-58
Identity = 101/127 (79.53%), Postives = 111/127 (87.40%), Query Frame = 0
Query:   54 MFGMPYSSEPITEELLPPEKIVTPISDRAIDFRKELKTLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLLLEWLRSQNQQNADVASALEAAMRECESAHEGAIASL 180
            MFGMPYSSEP+ +ELLPPEKIV P S +AIDFR ELK LLNSIMANYGQFMEMLVSSP+RAHEKLSDVETLFVNFHSLLNRYRAHQARH++LE LRSQ ++N  V SALEAAM +C SA EGA + L
Sbjct:    1 MFGMPYSSEPVEQELLPPEKIVVPASGQAIDFRAELKGLLNSIMANYGQFMEMLVSSPARAHEKLSDVETLFVNFHSLLNRYRAHQARHIVLERLRSQAKENDAVMSALEAAMHQCTSAQEGAFSCL 127          
BLAST of mRNA_D-dudresnayi_contig9715.28494.1 vs. uniprot
Match: A0A6U1QAX8_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QAX8_9STRA)

HSP 1 Score: 108 bits (269), Expect = 5.050e-26
Identity = 69/174 (39.66%), Postives = 100/174 (57.47%), Query Frame = 0
Query:    3 AEEAKVVGAVPPPPAYYKLFAPDAHGAAGDGTASAFPLEPPRPPGPGETYRMFGMPYSSEPITEELLPPEKIVTPISDRAI-DFRKELKTLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLLLEWLRSQNQQNADVASALEAAMRECESAHEG 175
            A+E +VV A+P PP Y+K F  +            F L+  RPP P  +Y  FG+PYS+E     L+P EK + P  D    +FR E++ LL SIMANY Q +++L+  PS+   K+ ++E LFVNFHS+LN++R HQAR ++L  L+ Q +      + LE+ M       EG
Sbjct:    2 ADELQVVSALPAPPDYFKRFEDE-----------NFQLK--RPPVPEGSYASFGIPYSAEAFIPTLVPDEKKLGPKQDDLDRNFRSEMQKLLQSIMANYVQLLDILIECPSQQSRKVEELEQLFVNFHSILNQFRQHQAREMVLVRLKRQKKDEQKALAMLESQMEAVRQVVEG 162          
BLAST of mRNA_D-dudresnayi_contig9715.28494.1 vs. uniprot
Match: F0WF41_9STRA (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WF41_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 7.360e-21
Identity = 58/153 (37.91%), Postives = 91/153 (59.48%), Query Frame = 0
Query:    7 KVVGAVPPPPAYYKLFAPDAHGAAGDGTASAFPLEPPRPPGPGETYRMFGMPYSSEPITEELLPPEKIVTPISD--------RAIDFRKELKTLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLLLEWLRSQ 151
            ++V   PPPPA++ L+  D      D  A A    PP P  P   Y MFG PYS++ +  +LLP +     +SD        +AID++ +LK L  S++AN  Q +++L+ +P   +EK+ D+E LFVN H+L+N++R HQAR ++++ LR Q
Sbjct:   11 EIVSEFPPPPAFFSLYQID------DVNAPA----PPAPMAPN--YHMFGTPYSTKDVVPDLLPDDSKKLYLSDTSAQDPAPQAIDYKAQLKKLNRSLLANCIQLLDVLIRNPKVFNEKVDDLELLFVNMHNLINKFRPHQAREMIIQLLRGQ 151          
BLAST of mRNA_D-dudresnayi_contig9715.28494.1 vs. uniprot
Match: A0A835YZG8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZG8_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 8.310e-12
Identity = 52/141 (36.88%), Postives = 73/141 (51.77%), Query Frame = 0
Query:    3 AEEAKVVGAVPPPPAYYKLFAPDAHGAAGDGTASAFPL-----------------EPPRPPGPGETYRMFGMPYSSEPITEELLPPEKIV---------TPISDRAIDFRKELKTLLNSIMANYGQFMEMLVSSPSRAHEK 117
            AEE KVV A+P PPAYYKLFA  +  A  + +  A  L                 EPP  P  G  Y M+G  Y  +   E LLP E+I+         +  SD  ++F+ E++ LL+S+MANY Q +++L+ SPS   +K
Sbjct:   74 AEETKVVSALPLPPAYYKLFAKRSEAAGAEDSTPAKDLDAQKSPAAAADAEINLLEPPPLPSVGGAYNMYGTAYKVDFELEYLLPREQILFGAPPEGTASSSSDLNLNFKDEMRRLLDSVMANYAQLLDVLMRSPSLHAQK 214          
BLAST of mRNA_D-dudresnayi_contig9715.28494.1 vs. uniprot
Match: A0A261Y1E2_9FUNG (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y1E2_9FUNG)

HSP 1 Score: 72.0 bits (175), Expect = 1.350e-11
Identity = 47/137 (34.31%), Postives = 72/137 (52.55%), Query Frame = 0
Query:   40 LEPPRPPGPGETYRMFG--------MPYSSEPITEELLPPEKIVTPISDRAIDFRKELKTLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLLLEWLRSQNQQNADVASALEAAMRE 168
            LEPP+P     +Y +F         +P  SE   E+L P         D  ID  KELK L +S++ NY Q +++LV +P +   K+  + T+F+N H L+N YR HQAR +L+  ++ Q ++       LEA  R+
Sbjct:   67 LEPPKPTFEDGSYSLFNQTWQIEDKLPSLSEMDVEQLYP---------DGPIDRIKELKKLNHSLVINYLQLLDLLVKNPQQFDTKVQHLRTIFINMHHLINEYRPHQAREILILLMQQQVERKRKATEQLEAKCRD 194          
BLAST of mRNA_D-dudresnayi_contig9715.28494.1 vs. uniprot
Match: A0A8J2Q016_9HEXA (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2Q016_9HEXA)

HSP 1 Score: 70.1 bits (170), Expect = 9.290e-11
Identity = 47/154 (30.52%), Postives = 76/154 (49.35%), Query Frame = 0
Query:   14 PPPAYYKLFAPDAHGAAGDGTASAFPLEPPRPPGPGETYRMFGMPYSSEPITEELLPPEKIVTPISDRAI--------DFRKELKTLLNSIMANYGQFMEMLVSSP--SRAHEKLSDVETLFVNFHSLLNRYRAHQARHLLLEWLRSQNQQNAD 157
            PP AYY L+         +        +PP  P   ETY MFG+ + ++         ++I+ P+  + I        D R+ELK + +SI+ N+   ++ L+S+P  S+  EK  D+  LF++ H L+N +R HQAR  L   +  Q +Q  D
Sbjct:   71 PPKAYYNLY-------TDENIRRGRAPKPPPXPQTHETYSMFGIVFHAD---------DQIIRPLESQGIRRLYPQNFDHRRELKKMNHSILVNFLDLLDTLISAPESSKRQEKADDLSLLFIHMHHLINEFRPHQARETLRVMMEVQKRQTLD 208          
BLAST of mRNA_D-dudresnayi_contig9715.28494.1 vs. uniprot
Match: A0A5M9JAI2_MONFR (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Monilinia fructicola TaxID=38448 RepID=A0A5M9JAI2_MONFR)

HSP 1 Score: 69.3 bits (168), Expect = 1.840e-10
Identity = 47/123 (38.21%), Postives = 66/123 (53.66%), Query Frame = 0
Query:   40 LEPPRPPGPGETYRMFG--------MPYSSEPITEELLPPEKIVTPIS---DRAIDFRKELKTLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLLLEWLRSQ 151
            L+PP PP  G +YR  G        +P   E   E L  P    T      DRA+     LK +  S++ NY + + ++  +P ++HEK+SD+ TLFVNFH LLN YR HQAR  L+  ++ Q
Sbjct:   72 LQPPEPPTSG-SYRTLGQIHKIKDELPTLEESEVERLYTPPDTPTGTGTHGDRALI----LKRIAKSLLLNYLELVGIMSINPEQSHEKISDLNTLFVNFHHLLNEYRPHQARESLILMMQDQ 189          
BLAST of mRNA_D-dudresnayi_contig9715.28494.1 vs. uniprot
Match: L8GHV0_ACACA (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GHV0_ACACA)

HSP 1 Score: 68.6 bits (166), Expect = 2.350e-10
Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 0
Query:   51 TYRMFGMPYSSEPITEELLPPEKIVTPISDRAIDFRKELKTLLNSIMANYGQFMEMLVSSPSRA--HEKLSDVETLFVNFHSLLNRYRAHQARHLLLEWLRSQ 151
            TY MFG P +++ + + L      V       I+ R+ELK L +SI+ NY + +  LV++P     H+K++D+E LFVN H LLN +R HQAR  L+  L  Q
Sbjct:   41 TYSMFGRPLATQEVEDSLENHPGRVQLYPRGEINHRRELKKLNHSILHNYLELLNTLVTNPHEYTFHDKVADLEQLFVNLHFLLNAFRPHQARETLISILAEQ 143          
BLAST of mRNA_D-dudresnayi_contig9715.28494.1 vs. uniprot
Match: A0A5M9J856_MONFR (Mediator of RNA polymerase II transcription subunit 7 n=1 Tax=Monilinia fructicola TaxID=38448 RepID=A0A5M9J856_MONFR)

HSP 1 Score: 69.3 bits (168), Expect = 2.740e-10
Identity = 47/123 (38.21%), Postives = 66/123 (53.66%), Query Frame = 0
Query:   40 LEPPRPPGPGETYRMFG--------MPYSSEPITEELLPPEKIVTPIS---DRAIDFRKELKTLLNSIMANYGQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLLLEWLRSQ 151
            L+PP PP  G +YR  G        +P   E   E L  P    T      DRA+     LK +  S++ NY + + ++  +P ++HEK+SD+ TLFVNFH LLN YR HQAR  L+  ++ Q
Sbjct:   72 LQPPEPPTSG-SYRTLGQIHKIKDELPTLEESEVERLYTPPDTPTGTGTHGDRALI----LKRIAKSLLLNYLELVGIMSINPEQSHEKISDLNTLFVNFHHLLNEYRPHQARESLILMMQDQ 189          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9715.28494.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5JU59_9PHAE2.810e-8069.35Mediator of RNA polymerase II transcription subuni... [more]
D8LAU4_ECTSI9.440e-5879.53Mediator of RNA polymerase II transcription subuni... [more]
A0A6U1QAX8_9STRA5.050e-2639.66Mediator of RNA polymerase II transcription subuni... [more]
F0WF41_9STRA7.360e-2137.91Mediator of RNA polymerase II transcription subuni... [more]
A0A835YZG8_9STRA8.310e-1236.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A261Y1E2_9FUNG1.350e-1134.31Mediator of RNA polymerase II transcription subuni... [more]
A0A8J2Q016_9HEXA9.290e-1130.52Mediator of RNA polymerase II transcription subuni... [more]
A0A5M9JAI2_MONFR1.840e-1038.21Mediator of RNA polymerase II transcription subuni... [more]
L8GHV0_ACACA2.350e-1039.81Mediator of RNA polymerase II transcription subuni... [more]
A0A5M9J856_MONFR2.740e-1038.21Mediator of RNA polymerase II transcription subuni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 148..168
NoneNo IPR availablePANTHERPTHR21428FAMILY NOT NAMEDcoord: 4..199
IPR009244Mediator complex, subunit Med7PFAMPF05983Med7coord: 13..171
e-value: 1.8E-30
score: 106.5
IPR037212Mediator complex, subunit Med7/Med21-likeSUPERFAMILY140718Mediator hinge subcomplex-likecoord: 83..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9715contigD-dudresnayi_contig9715:1859..5407 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9715.28494.1mRNA_D-dudresnayi_contig9715.28494.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig9715 1716..6279 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig9715.28494.1 ID=prot_D-dudresnayi_contig9715.28494.1|Name=mRNA_D-dudresnayi_contig9715.28494.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=223bp
MAAEEAKVVGAVPPPPAYYKLFAPDAHGAAGDGTASAFPLEPPRPPGPGE
TYRMFGMPYSSEPITEELLPPEKIVTPISDRAIDFRKELKTLLNSIMANY
GQFMEMLVSSPSRAHEKLSDVETLFVNFHSLLNRYRAHQARHLLLEWLRS
QNQQNADVASALEAAMRECESAHEGAIASLEPPSSAARADVANDAMDVDP
TVEEGQGVPTHRPQGMNGARGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009244Mediatior_Med7
IPR037212Med7/Med21-like