prot_D-dudresnayi_contig9416.28223.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-dudresnayi_contig9416.28223.1
Unique Name	prot_D-dudresnayi_contig9416.28223.1
Type	polypeptide
Organism	Desmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length	326

Homology

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BLAST of mRNA_D-dudresnayi_contig9416.28223.1 vs. uniprot
Match: A0A6H5KTV6_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV6_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 4.750e-32
Identity = 67/91 (73.63%), Postives = 73/91 (80.22%), Query Frame = 0

Query:  168 KTGYRLKGIVAHQGTADRGHCYSLIRVDGDKWLEFNDRRVTPYDPANIPRDCFGGAVTPEPGSA-DASGHGHL-----HETNAYLLLYERT 252
            +T YRLKGIVAHQGTAD GH YSLIR  GD+WLEFNDRRVTPYDPANIPRDCFGGA+TP+ G A DAS          HET+AYLLLYE+T
Sbjct: 2147 RTEYRLKGIVAHQGTADHGHYYSLIRASGDRWLEFNDRRVTPYDPANIPRDCFGGALTPQEGGALDASAXXXXXXXXXHETSAYLLLYEQT 2237

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BLAST of mRNA_D-dudresnayi_contig9416.28223.1 vs. uniprot
Match: D8LU88_ECTSI (Ubiquitin domain-containing protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU88_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 2.960e-31
Identity = 66/85 (77.65%), Postives = 71/85 (83.53%), Query Frame = 0

Query:  168 KTGYRLKGIVAHQGTADRGHCYSLIRVDGDKWLEFNDRRVTPYDPANIPRDCFGGAVTPEPGSA-DAS----GHGHLHETNAYLL 247
            +T YRLKGIVAHQGTAD GH YSLIR  GD+WLEFNDRRVTPYDPANIPRDCFGGA+TP+ G A DAS    G G LHET+AYLL
Sbjct: 3124 RTEYRLKGIVAHQGTADHGHYYSLIRAGGDRWLEFNDRRVTPYDPANIPRDCFGGALTPQEGRALDASAAGGGGGSLHETSAYLL 3208

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BLAST of mRNA_D-dudresnayi_contig9416.28223.1 vs. uniprot
Match: A0A835YPA6_9STRA (USP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPA6_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 5.140e-17
Identity = 36/52 (69.23%), Postives = 41/52 (78.85%), Query Frame = 0

Query:  171 YRLKGIVAHQGTADRGHCYSLIRVDGDKWLEFNDRRVTPYDPANIPRDCFGG 222
            YRLKG+VAH GTAD GH YS IRV    WLEFNDR VTP++ A IP++CFGG
Sbjct:    2 YRLKGVVAHVGTADSGHYYSFIRVANGSWLEFNDRVVTPFNEALIPKECFGG 53

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BLAST of mRNA_D-dudresnayi_contig9416.28223.1 vs. uniprot
Match: A0A7S3YZF3_9EUKA (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YZF3_9EUKA)

HSP 1 Score: 90.5 bits (223), Expect = 1.750e-16
Identity = 45/87 (51.72%), Postives = 56/87 (64.37%), Query Frame = 0

Query:  171 YRLKGIVAHQGTADRGHCYSLIRVDGD-KWLEFNDRRVTPYDPANIPRDCFGGA-----VTPEPGSADASGHGHLHETNAYLLLYER 251
            YRLKG+V H G A  GH YS IRV  D KW EFND+++TP+DP+ IP +CFGG+       P+ G+   S    +H  NAYLL YER
Sbjct:  389 YRLKGVVVHTGMASSGHYYSFIRVGSDNKWAEFNDKKITPFDPSRIPAECFGGSREVMRTDPKTGNKVKSQVDIIH--NAYLLFYER 473

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BLAST of mRNA_D-dudresnayi_contig9416.28223.1 vs. uniprot
Match: Q22E47_TETTS (Ubiquitin carboxy-terminal hydrolase n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q22E47_TETTS)

HSP 1 Score: 79.7 bits (195), Expect = 1.230e-12
Identity = 39/86 (45.35%), Postives = 53/86 (61.63%), Query Frame = 0

Query:  171 YRLKGIVAHQGTADRGHCYSLIRVDGDKWLEFNDRRVTPYDPANIPRDCFGGAVTPEPGSADASGH-----GHLHETNAYLLLYER 251
            Y LKG+V HQGT+D GH YSLI+   +KWLEFND  V P+D  ++P + FGG    +  + + S +      + +  NAYLL YER
Sbjct: 1846 YNLKGVVIHQGTSDSGHYYSLIKQQDEKWLEFNDTVVRPFDINDLPSEAFGGESDLQFNNGNQSMNLNNKMQNTNNKNAYLLFYER 1931

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BLAST of mRNA_D-dudresnayi_contig9416.28223.1 vs. uniprot
Match: A0A1X6PBX1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PBX1_PORUM)

HSP 1 Score: 75.1 bits (183), Expect = 4.300e-11
Identity = 36/85 (42.35%), Postives = 51/85 (60.00%), Query Frame = 0

Query:  171 YRLKGIVAHQGTADRGHCYSLIRVDG-DKWLEFNDRRVTPYDPANIPRDCFGGAVTP---EPGSADASGHGHLHETNAYLLLYER 251
            YRL G++ H GTAD GH YS ++  G D+W+ FND    P+DPA+IPR C+GG  +    +P +          + +AY+L YER
Sbjct: 2699 YRLVGMLVHAGTADSGHYYSFVQERGTDRWIHFNDTITEPFDPADIPRTCYGGVESVSQWDPQAQKTVQWLQSKQHSAYMLFYER 2783

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BLAST of mRNA_D-dudresnayi_contig9416.28223.1 vs. uniprot
Match: A0CLR4_PARTE (USP domain-containing protein n=2 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0CLR4_PARTE)

HSP 1 Score: 73.2 bits (178), Expect = 1.320e-10
Identity = 36/81 (44.44%), Postives = 50/81 (61.73%), Query Frame = 0

Query:  171 YRLKGIVAHQGTADRGHCYSLIRVDGDKWLEFNDRRVTPYDPANIPRDCFGGAVTPEPGSADASGHGHLHETNAYLLLYER 251
            Y LKG++ H G+A+ GH YS IR D DKW EFND+ + P+   N+  +CFGGA      + + S  G  +  NAY+L YE+
Sbjct:   40 YILKGVLVHVGSAEGGHYYSYIR-DVDKWYEFNDKVICPFQIENLKTECFGGA------NNNLSEWGMSNSKNAYILFYEK 113

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BLAST of mRNA_D-dudresnayi_contig9416.28223.1 vs. uniprot
Match: A0DID2_PARTE (USP domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0DID2_PARTE)

HSP 1 Score: 73.2 bits (178), Expect = 1.710e-10
Identity = 36/81 (44.44%), Postives = 50/81 (61.73%), Query Frame = 0

Query:  171 YRLKGIVAHQGTADRGHCYSLIRVDGDKWLEFNDRRVTPYDPANIPRDCFGGAVTPEPGSADASGHGHLHETNAYLLLYER 251
            Y LKG++ H G+A+ GH YS IR D DKW EFND+ + P+   N+  +CFGGA      + + S  G  +  NAY+L YE+
Sbjct: 1415 YILKGVLVHVGSAEGGHYYSYIR-DVDKWYEFNDKVICPFQIENLKTECFGGA------NNNLSEWGMSNSKNAYILFYEK 1488

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BLAST of mRNA_D-dudresnayi_contig9416.28223.1 vs. uniprot
Match: A0A1I8I193_9PLAT (USP domain-containing protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8I193_9PLAT)

HSP 1 Score: 72.4 bits (176), Expect = 2.990e-10
Identity = 40/90 (44.44%), Postives = 49/90 (54.44%), Query Frame = 0

Query:  171 YRLKGIVAHQGTADRGHCYSLIRV-------DGDKWLEFNDRRVTPYDPANIPRDCFGGAVTPEPGSA--DASGHGHLHETN-AYLLLYE 250
            Y L G+  H GTAD GH YS IR        D D+WL FND  V P+DP+ IP +CFGG V+ +   +  D         TN AY+L YE
Sbjct:  376 YELIGVTVHTGTADGGHYYSYIRDRLSPSVGDADRWLWFNDSEVRPFDPSQIPVECFGGEVSSKAYDSMQDRFMDFSFERTNSAYMLFYE 465

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BLAST of mRNA_D-dudresnayi_contig9416.28223.1 vs. uniprot
Match: A0A267DYC9_9PLAT (USP domain-containing protein (Fragment) n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267DYC9_9PLAT)

HSP 1 Score: 72.4 bits (176), Expect = 3.230e-10
Identity = 40/90 (44.44%), Postives = 49/90 (54.44%), Query Frame = 0

Query:  171 YRLKGIVAHQGTADRGHCYSLIRV-------DGDKWLEFNDRRVTPYDPANIPRDCFGGAVTPEPGSA--DASGHGHLHETN-AYLLLYE 250
            Y L G+  H GTAD GH YS IR        D D+WL FND  V P+DP+ IP +CFGG V+ +   +  D         TN AY+L YE
Sbjct: 1641 YELIGVTVHTGTADGGHYYSYIRDRLSPSVGDADRWLWFNDSEVRPFDPSQIPVECFGGEVSSKAYDSMQDRFMDFSFERTNSAYMLFYE 1730

The following BLAST results are available for this feature:

BLAST of mRNA_D-dudresnayi_contig9416.28223.1 vs. uniprot

BLAST of mRNA_D-dudresnayi_contig9416.28223.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KTV6_9PHAE	4.750e-32	73.63	USP domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LU88_ECTSI	2.960e-31	77.65	Ubiquitin domain-containing protein (Partial) (Fra...	[more]
A0A835YPA6_9STRA	5.140e-17	69.23	USP domain-containing protein (Fragment) n=1 Tax=T...	[more]
A0A7S3YZF3_9EUKA	1.750e-16	51.72	Ubiquitin carboxyl-terminal hydrolase (Fragment) n...	[more]
Q22E47_TETTS	1.230e-12	45.35	Ubiquitin carboxy-terminal hydrolase n=1 Tax=Tetra...	[more]
A0A1X6PBX1_PORUM	4.300e-11	42.35	Uncharacterized protein n=1 Tax=Porphyra umbilical...	[more]
A0CLR4_PARTE	1.320e-10	44.44	USP domain-containing protein n=2 Tax=Paramecium t...	[more]
A0DID2_PARTE	1.710e-10	44.44	USP domain-containing protein n=1 Tax=Paramecium t...	[more]
A0A1I8I193_9PLAT	2.990e-10	44.44	USP domain-containing protein n=1 Tax=Macrostomum ...	[more]
A0A267DYC9_9PLAT	3.230e-10	44.44	USP domain-containing protein (Fragment) n=1 Tax=M...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001394	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	PFAM	PF00443	UCH	coord: 160..249 e-value: 3.4E-9 score: 36.6
None	No IPR available	GENE3D	3.90.70.10		coord: 17..261 e-value: 1.4E-17 score: 65.6
None	No IPR available	PANTHER	PTHR24006	FAMILY NOT NAMED	coord: 148..252
None	No IPR available	PANTHER	PTHR24006:SF716	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 2	coord: 148..252
IPR028889	Ubiquitin specific protease domain	PROSITE	PS50235	USP_3	coord: 1..252 score: 10.935
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 165..263

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-dudresnayi_contig9416	contig	D-dudresnayi_contig9416:2531..4692 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-dudresnayi_contig9416.28223.1	mRNA_D-dudresnayi_contig9416.28223.1	Desmarestia dudresnayi DdudBR16 monoicous	mRNA	D-dudresnayi_contig9416 2530..4692 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-dudresnayi_contig9416.28223.1 ID=prot_D-dudresnayi_contig9416.28223.1|Name=mRNA_D-dudresnayi_contig9416.28223.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=326bp
AALADEPPEPETVIAHTTTTTSSSDDDADAHRSGKYSCASRSSRNNAAAA
QEEQGVVEEEGKEADGGEGSPLRARQLWLSSKPGADDQEATTITTAMPEN
SKIPSGGVGGGEGDAASEVVEAAEAPSYGSDQGSRVNGDVAVAVAAAGVS
AEAPKRSTMGRRDRERNKTGYRLKGIVAHQGTADRGHCYSLIRVDGDKWL
EFNDRRVTPYDPANIPRDCFGGAVTPEPGSADASGHGHLHETNAYLLLYE
RTTSSTDHHHHYHDHHHHHSDHNDHHRRVTDPLSSAALLLSPSPQNDSQR
TSFGSGQQHPDPMSVPAPTEQTMTAA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001394	Peptidase_C19_UCH
IPR028889	USP_dom
IPR038765	Papain-like_cys_pep_sf