prot_D-dudresnayi_contig937.28161.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-dudresnayi_contig937.28161.1
Unique Name	prot_D-dudresnayi_contig937.28161.1
Type	polypeptide
Organism	Desmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length	240

Homology

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BLAST of mRNA_D-dudresnayi_contig937.28161.1 vs. uniprot
Match: D8LM33_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM33_ECTSI)

HSP 1 Score: 324 bits (831), Expect = 3.090e-108
Identity = 173/239 (72.38%), Postives = 198/239 (82.85%), Query Frame = 0

Query:    1 MFWAVISLFYLCFVGPLGMIVRTIFGDFTTLASFVILVGLEEMVKVILARWSKRDIAIGRETKAHQIASTATSVGYAVGFSFLMIILLDVVVDHLFDIEEDTFSDLVVASCALFITTIFGTPMHVLSGYLVGLEVTRQSHFMTAALYSFLIRALFMVNIVVWCFLSGSWQVIMVGLLMTNVLICVAMVHRIKKVESTLPVEYLQRVGYLQAFGYGVLPGGEADDDDVEIPCNVDVNTLV 239
            M W V  LF LC  G +G ++  +FG    +   VILVGLEEMVKV+ ARWSKRD+AIGRETKAHQIA+TATSVGY+VGFSF MII+LD+ VD L  I+ D+ +D++VA  AL ITT+FGTPMHVLSGYLVGLEVTRQ+HFM  ALY+FLIR+LFMVNI +W FL G+WQ IM GLL+TNVLIC AMVHRIKKVE+TLPVEYLQRVGYLQAFGYGVLPGG  D D+VEIP NVDVNTLV
Sbjct:  109 MVWVVYMLFRLCSTGLMGRLLYMMFGRLVGVVVLVILVGLEEMVKVVFARWSKRDVAIGRETKAHQIAATATSVGYSVGFSFFMIIVLDLEVDLLLGIQADSSADMIVALLALLITTMFGTPMHVLSGYLVGLEVTRQTHFMKVALYTFLIRSLFMVNIFLWVFLFGTWQPIMAGLLLTNVLICCAMVHRIKKVEATLPVEYLQRVGYLQAFGYGVLPGG--DVDEVEIPSNVDVNTLV 345

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BLAST of mRNA_D-dudresnayi_contig937.28161.1 vs. uniprot
Match: A0A836CLE4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLE4_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.560e-31
Identity = 92/231 (39.83%), Postives = 126/231 (54.55%), Query Frame = 0

Query:   35 VILVGLEEMVKVILARWSKRDIAIGRETKAHQIASTATSVGYAVGFSFLMIILLDVVVDHL---FDIEEDTFSD------LVVASCALFITTIFGTPMHVLSGYLVGLEVTRQSHFMTAALYSFLIRALFMVNIVVWCFLSGSWQVIMVGLLMTNVLICVAMVHRIKKVESTLPVEYLQRVGYLQAFGYG-----------------------VLPGGEADDDDVEIPCNV 233
            + +VG+EE+ +V++AR  K  + + RET  HQIA TATSVGYA   + L  ++L  +  +L    DI+ D   D        VA+ A  I   F  P+ VL+GY+ GL  TR+  F    L +F +R+  MV  ++W  L  SW  + + ++ TN+ I   MV RIK+VE+ LP EY QRVGYLQAFGYG                       VLPGG  D D+VEIP N+
Sbjct:  133 IYVVGIEELFRVLIARRLKSGLDMSRETITHQIAYTATSVGYAAASAALNFVVLASLEGYLAGEHDIDPDLSPDGAPALDFKVAAAAGLIRMAFSVPVQVLAGYMTGLNTTRRLPFKRVGLEAFALRSALMVLSILWELLLPSWLGL-IAVIGTNIGIVWLMVRRIKRVEAQLPQEYFQRVGYLQAFGYGXXXXXXXXXXXXXXXXXXXXXXXVLPGG--DPDEVEIPDNI 360

The following BLAST results are available for this feature:

BLAST of mRNA_D-dudresnayi_contig937.28161.1 vs. uniprot

BLAST of mRNA_D-dudresnayi_contig937.28161.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LM33_ECTSI	3.090e-108	72.38	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A836CLE4_9STRA	1.560e-31	39.83	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 26..30
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 189..239
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 171..188
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 166..170
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 7..25
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 68..87
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..6
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 144..165
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 133..143
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 49..67
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 107..132
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 88..106
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 31..48
None	No IPR available	TMHMM	TMhelix		coord: 69..91
None	No IPR available	TMHMM	TMhelix		coord: 29..48
None	No IPR available	TMHMM	TMhelix		coord: 166..188
None	No IPR available	TMHMM	TMhelix		coord: 106..128
None	No IPR available	TMHMM	TMhelix		coord: 2..24
None	No IPR available	TMHMM	TMhelix		coord: 140..162

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-dudresnayi_contig937	contig	D-dudresnayi_contig937:22851..28501 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-dudresnayi_contig937.28161.1	mRNA_D-dudresnayi_contig937.28161.1	Desmarestia dudresnayi DdudBR16 monoicous	mRNA	D-dudresnayi_contig937 21073..28631 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-dudresnayi_contig937.28161.1 ID=prot_D-dudresnayi_contig937.28161.1|Name=mRNA_D-dudresnayi_contig937.28161.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=240bp
MFWAVISLFYLCFVGPLGMIVRTIFGDFTTLASFVILVGLEEMVKVILAR
WSKRDIAIGRETKAHQIASTATSVGYAVGFSFLMIILLDVVVDHLFDIEE
DTFSDLVVASCALFITTIFGTPMHVLSGYLVGLEVTRQSHFMTAALYSFL
IRALFMVNIVVWCFLSGSWQVIMVGLLMTNVLICVAMVHRIKKVESTLPV
EYLQRVGYLQAFGYGVLPGGEADDDDVEIPCNVDVNTLV*