prot_D-dudresnayi_contig10542.594.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig10542.594.1
Unique Nameprot_D-dudresnayi_contig10542.594.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length174
Homology
BLAST of mRNA_D-dudresnayi_contig10542.594.1 vs. uniprot
Match: A0A6H5JG03_9PHAE (BHLH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG03_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 5.590e-77
Identity = 131/166 (78.92%), Postives = 148/166 (89.16%), Query Frame = 0
Query:    9 SEVKRQERNAREQRRSLMTSQQIDRLRQLLLESGIHAKPNKCSVLSEVAEYITQLETRLEELEAERETWIAETADIPEVARRDPNGGAIDCKQVFAHASVALAMATVEGRLMESNLQFEALSGYSKEELKQLTLLSLTAPSDLQDTFGRLSAMLTDGTGKAPKHVL 174
            SE+KRQERNAREQRRSLMTS+QID+LR+LL E GI  K NK SVLSEVA Y  QL+ ++E+LE ER  W+AET+D+PEV R+DPNGG IDCKQVFAHASVALAMATVEGRL+ESNLQFEALSG+  EELKQLTLLSLTAPS+LQ+TF RLSAMLTDGTGKAP+HVL
Sbjct:  195 SELKRQERNAREQRRSLMTSRQIDKLRKLLQECGIQTKANKSSVLSEVASYTAQLQQQIEQLEEERARWMAETSDVPEVGRQDPNGGTIDCKQVFAHASVALAMATVEGRLIESNLQFEALSGHRNEELKQLTLLSLTAPSELQETFQRLSAMLTDGTGKAPEHVL 360          
BLAST of mRNA_D-dudresnayi_contig10542.594.1 vs. uniprot
Match: D7G8G2_ECTSI (BHLH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8G2_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 3.400e-67
Identity = 114/147 (77.55%), Postives = 130/147 (88.44%), Query Frame = 0
Query:    9 SEVKRQERNAREQRRSLMTSQQIDRLRQLLLESGIHAKPNKCSVLSEVAEYITQLETRLEELEAERETWIAETADIPEVARRDPNGGAIDCKQVFAHASVALAMATVEGRLMESNLQFEALSGYSKEELKQLTLLSLTAPSDLQDTF 155
            SE+KRQERNAREQRRSLMTS+QID+LR+LL E GI  K NK SVLSEVA Y  QL+ ++E+LE ER  W+AET+D+PEV R+DPNGG IDCKQVFAHASVALAMATVEGRL+ESNLQFEALSG+  EELKQLTLLSLTAPS+LQ+TF
Sbjct:  200 SELKRQERNAREQRRSLMTSRQIDKLRKLLQECGIQTKANKSSVLSEVASYTAQLQQQIEQLEEERARWMAETSDVPEVGRQDPNGGTIDCKQVFAHASVALAMATVEGRLIESNLQFEALSGHRNEELKQLTLLSLTAPSELQETF 346          
BLAST of mRNA_D-dudresnayi_contig10542.594.1 vs. uniprot
Match: A0A7S1BWH9_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BWH9_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 7.090e-19
Identity = 61/174 (35.06%), Postives = 93/174 (53.45%), Query Frame = 0
Query:   10 EVKRQERNAREQRRSLMTSQQIDRLRQLLLESGIHAKPNKCSVLSEVAEYITQLETRLEELEAERETWI---------AETADIPEVARRDPNGGAIDCKQVFAHA----------SVALAMATVEGRLMESNLQFEALSGYSKEELKQLTLLSLTAPSDLQDTFGRLSAMLTD 164
            E +R +RN REQ+RS   SQQI  L+ +L  S I  KPNK S+L   A YI QL++R   L++E +  +           T   P+   +  N  +ID   VF             S A+A+A+++GR ++ N+QFE +SGY+KEEL + TL +     D+++ F  +  ML +
Sbjct:  119 EKRRYDRNLREQQRSYKISQQIKELKTVLSNSNIPFKPNKFSILLSTAVYIKQLQSRAMLLDSEHQKLLNSIGQASEMVTTGQSPDDLAQASNTNSIDADLVFVQGLQYSNIFYQCSAAIAVASLDGRFLDCNIQFEKVSGYTKEELTRETLFNFLTNDDMEEVFKVMGQMLKE 292          
BLAST of mRNA_D-dudresnayi_contig10542.594.1 vs. uniprot
Match: W7TXM2_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXM2_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 4.810e-5
Identity = 26/81 (32.10%), Postives = 48/81 (59.26%), Query Frame = 0
Query:   92 PNGGAIDCKQVFAHASVALAMATVEGRLMESNLQFEALSGYSKEELKQLTLLSLTAPSDLQDTFGRLSAMLTDGTGKAPKH 172
            PN  + D   +F +AS+A+A+A+++G+ ++ N  F  +SGYS  E+ Q ++  LT   D Q+  G +  M+ +   ++ KH
Sbjct:  298 PNKKSADYALMFQNASIAMAVASLDGKFVDCNSAFSIISGYSNGEVLQRSVFDLTPAEDCQELMGIVGKMM-ESPAESAKH 377          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10542.594.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JG03_9PHAE5.590e-7778.92BHLH domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G8G2_ECTSI3.400e-6777.55BHLH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S1BWH9_9STRA7.090e-1935.06Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
W7TXM2_9STRA4.810e-532.10Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 53..80
NoneNo IPR availableGENE3D3.30.450.20coord: 98..172
e-value: 2.7E-7
score: 32.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 17..69
e-value: 3.5E-6
score: 36.6
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 12..64
e-value: 3.7E-8
score: 33.2
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 11..63
score: 10.829
IPR000014PAS domainTIGRFAMTIGR00229TIGR00229coord: 101..166
e-value: 6.9E-8
score: 30.6
IPR000014PAS domainPROSITEPS50112PAScoord: 100..165
score: 8.558
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 8..85
e-value: 5.2E-11
score: 44.5
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 9..76
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 101..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10542contigD-dudresnayi_contig10542:3056..6977 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10542.594.1mRNA_D-dudresnayi_contig10542.594.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig10542 3054..6977 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig10542.594.1 ID=prot_D-dudresnayi_contig10542.594.1|Name=mRNA_D-dudresnayi_contig10542.594.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=174bp
RTSVLLDASEVKRQERNAREQRRSLMTSQQIDRLRQLLLESGIHAKPNKC
SVLSEVAEYITQLETRLEELEAERETWIAETADIPEVARRDPNGGAIDCK
QVFAHASVALAMATVEGRLMESNLQFEALSGYSKEELKQLTLLSLTAPSD
LQDTFGRLSAMLTDGTGKAPKHVL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
IPR000014PAS
IPR036638HLH_DNA-bd_sf
IPR035965PAS-like_dom_sf