prot_D-dudresnayi_contig1052.567.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig1052.567.1
Unique Nameprot_D-dudresnayi_contig1052.567.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length469
Homology
BLAST of mRNA_D-dudresnayi_contig1052.567.1 vs. uniprot
Match: A0A6H5K6S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6S9_9PHAE)

HSP 1 Score: 335 bits (858), Expect = 6.790e-107
Identity = 237/474 (50.00%), Postives = 293/474 (61.81%), Query Frame = 0
Query:   20 GPACLAAGLFFVGPALPVNALVVRTAATTAAFRGLRCPASHHRRSCVRPRGAGRLSLSAPGGSG-AEDMDSSDIYADLRYRLEELEVAQSFAQSLEEQDQADGGVSDSRRRNERDTRGPXXXXXXNVAAG-------TKAYSGQEMKKAYYEAFWRARNLHKEAKFEGG-GQGDKNSASASDPPA--PPTAQAATHATALTPMAMELVMSR-----LSSARDTTAATAAEVQGLTQMYYLDEEAEKAMATPKRAGEAAVTVA-----SGGVSCGKEVMMSSQD-AGDLDDLMQ--QPQGLSQLFYLEAEEEEKAAAALPRVSGRSFLREKLGVPGVVVQDLRQVELDHARLAMLAVLLSGAVGAGAG-----VADAHVGFSALAEVARTPWLDPCVASVILAAKALSEGDWRIGKGALSGWADQALSVASNSGAKLLHLSSGDEMRKLAVEMEVKHGRMALGAVVCAMAQQGLV 464
            GPACL  GL        V A V       ++        +   R+ VRPR AG + LSA GGSG A D+DSS++YAD+R RLEEL  + S         ++D G S      E D   P      N            KAYS QEMK+ YYEAFWRARNLH+EAKFE   G  D  S+    PPA  PP A+A +  T L+ MAM + +SR                 ++VQGLTQMY+L+ E E+ +        AA   A         +   E + ++ D A + + ++   QPQGL+Q+F+L+ E+E  AAAALP V  RSFLRE+LGVPG +VQDLRQVELDHARLAMLAVLLSG VGAG       + +AH GFSALA+VARTPWLDP VA  ILAAKALSEGDWR+GKGA++G AD+AL+  SN+GAK+L L SG+E+R+LAVE+EVKHGRMALGAVVCAMAQQGL+
Sbjct:   16 GPACLVVGLLLGRSGRAVQAFVPTHHRGVSSLLTRPFAPARGGRALVRPR-AGDMRLSATGGSGGAGDIDSSELYADMRRRLEELRQSSSS--------RSDTGFSPI----EDDVSDPGLFQQQNXXXXXXXXXXXAKAYSAQEMKQRYYEAFWRARNLHREAKFEASSGAEDDYSSDTPAPPATPPPEAEAGSRTTILSHMAMNMFLSRGAXXXXXXXXXXXXXXXSDVQGLTQMYHLELEEEEGVLASTAVAAAATAEALPVRQPQHAAVSTEAVFAAPDVAAEAESMIPTAQPQGLTQVFFLDPEDEALAAAALPVVPERSFLRERLGVPGELVQDLRQVELDHARLAMLAVLLSGVVGAGXXXXXGVLLNAHDGFSALADVARTPWLDPYVAGGILAAKALSEGDWRVGKGAMAGLADRALNAVSNTGAKVLRLGSGNELRRLAVEVEVKHGRMALGAVVCAMAQQGLL 476          
BLAST of mRNA_D-dudresnayi_contig1052.567.1 vs. uniprot
Match: D8LGH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGH2_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 5.630e-92
Identity = 223/441 (50.57%), Postives = 270/441 (61.22%), Query Frame = 0
Query:   20 GPACLAAGLFFVGPALPVNALVVRTAATTAAFRGLRCPASHHRRSCVRPRGAGRLSLSAPGGSG-AEDMDSSDIYADLRYRLEELEVAQSFAQ----SLEEQDQADGGVSDSRRRNERDTRGPXXXXXXNVAAGTKAYSGQEMKKAYYEAFWRARNLHKEAKFEGG-GQGDKNSASASDPPA--PPTAQAATHATALTPMAMELVMSRLSSAR----DTTAATAAEVQGLTQMYYLDEEAEKAMATPKR------AGEAAVTVASGGVSCGKEVMMSSQDAGDLDDLM---QQPQGLSQLFYLEAEEEEKAAAALPRVSGRSFLREKLGVPGVVVQDLRQVELDHARLAMLAVLLSGAVGAGAG-----VADAHVGFSALAEVARTPWLDPCVASVILAAKALSEGDWRIGKGALSGWADQALSVASNSGAKLLHLSSGDE 434
            GPACL  GL        V A V       ++      PA   R + VRPR AG + LSA GGSG A D+DSS++YAD+R RLEEL  + S +     S  E D +D G+              XXXXXX      KAYS QEMK+ YYEAFWRARNLHKEAKFEG  G  D  S+    PPA  PP A+A +  T L+ MAM++ +SR ++A           +++VQGLTQMYYL+ E                A E          + G E + ++ D     + M    +PQGL+Q+F+L+ ++E  AAAALP V GRSFLRE+LGVPG VVQDLRQVELDHARLAMLAVLLSGAVGA        +  AH GFSALA+VARTPWLDP VA  ILAAKALSEGDWRIGKGA++GWAD+ALS  SN+GAK+L L SG+E
Sbjct:   15 GPACLVLGLLLSRSGRSVQAFVPAHHRGVSSLTPPSAPARGGR-ALVRPR-AGDMRLSATGGSGGAGDIDSSELYADMRRRLEELRQSSSSSSDTGLSPIEDDVSDLGLFQQX---------XXXXXXXXXXXXAKAYSAQEMKQRYYEAFWRARNLHKEAKFEGSSGIEDDYSSDTPAPPATPPPEAEAGSRTTILSHMAMDMFLSRGAAAEADDXXXXXXXSSDVQGLTQMYYLELEEXXXXXXXXXXXXXXTAAEPLPVRQPQHAAVGAEAVFAASDVAAAAESMIPTAEPQGLTQVFFLDPKDEALAAAALPVVPGRSFLRERLGVPGEVVQDLRQVELDHARLAMLAVLLSGAVGAXXXXXXXVLLKAHDGFSALADVARTPWLDPYVAGGILAAKALSEGDWRIGKGAMAGWADRALSAVSNTGAKVLRLGSGNE 444          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig1052.567.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K6S9_9PHAE6.790e-10750.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGH2_ECTSI5.630e-9250.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 331..461
e-value: 7.4E-8
score: 33.1
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10coord: 324..467
e-value: 1.6E-8
score: 36.6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 32..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 19..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..468
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 334..464
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig1052contigD-dudresnayi_contig1052:7193..13681 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig1052.567.1mRNA_D-dudresnayi_contig1052.567.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig1052 6327..13999 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig1052.567.1 ID=prot_D-dudresnayi_contig1052.567.1|Name=mRNA_D-dudresnayi_contig1052.567.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=469bp
MPSRRPQPNLRALPSAAMVGPACLAAGLFFVGPALPVNALVVRTAATTAA
FRGLRCPASHHRRSCVRPRGAGRLSLSAPGGSGAEDMDSSDIYADLRYRL
EELEVAQSFAQSLEEQDQADGGVSDSRRRNERDTRGPPGGGGGNVAAGTK
AYSGQEMKKAYYEAFWRARNLHKEAKFEGGGQGDKNSASASDPPAPPTAQ
AATHATALTPMAMELVMSRLSSARDTTAATAAEVQGLTQMYYLDEEAEKA
MATPKRAGEAAVTVASGGVSCGKEVMMSSQDAGDLDDLMQQPQGLSQLFY
LEAEEEEKAAAALPRVSGRSFLREKLGVPGVVVQDLRQVELDHARLAMLA
VLLSGAVGAGAGVADAHVGFSALAEVARTPWLDPCVASVILAAKALSEGD
WRIGKGALSGWADQALSVASNSGAKLLHLSSGDEMRKLAVEMEVKHGRMA
LGAVVCAMAQQGLVAVGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR023329Chlorophyll_a/b-bd_dom_sf