prot_D-dudresnayi_contig10518.565.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig10518.565.1
Unique Nameprot_D-dudresnayi_contig10518.565.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length107
Homology
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BLAST of mRNA_D-dudresnayi_contig10518.565.1 vs. uniprot
Match: D7G7A4_ECTSI (Similar to chromodomain helicase DNA binding protein 4 isoform 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A4_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 9.800e-15
Identity = 40/55 (72.73%), Postives = 45/55 (81.82%), Query Frame = 0 
Query:    1 LFGDRPADSGAGWEKILGKSYKLDQKKQQARLGRGKREKTQVRLYAADEAQPSPS 55
            LFG+RPADSGAGWE+IL KSYK  Q  Q ARLGRGKREKTQVR YAA+E +  P+
Sbjct: 1459 LFGERPADSGAGWEEILAKSYKEQQTSQAARLGRGKREKTQVRPYAAEEDEHDPT 1513
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BLAST of mRNA_D-dudresnayi_contig10518.565.1 vs. uniprot
Match: A0A6H5JZW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZW8_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 3.000e-13
Identity = 54/113 (47.79%), Postives = 61/113 (53.98%), Query Frame = 0 
Query:    1 LFGDRPADSGAGWEKILGKSYKLDQKKQQARLGRGKREKTQ----VRLYAADE-----AQPSPSADEDGSI-------------------------EFEPEQPDAEFEMPSSK 79
            LFG+RPADSGAGWE+IL KSYK  Q  Q ARLGRGKREKTQ    VR YAA+E     A        +GS+                         E+  EQPDAEFE P+SK
Sbjct: 1358 LFGERPADSGAGWEEILAKSYKEHQTSQAARLGRGKREKTQASRQVRPYAAEEDEHDAANHGGGGSSNGSLRHGEEGRXXXXXXXXXXXXXXXXXXEYGSEQPDAEFEPPTSK 1470
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10518.565.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7A4_ECTSI9.800e-1572.73Similar to chromodomain helicase DNA binding prote... [more]
A0A6H5JZW8_9PHAE3.000e-1347.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009463Domain of unknown function DUF1087PFAMPF06465DUF1087coord: 13..43
e-value: 5.1E-5
score: 23.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10518contigD-dudresnayi_contig10518:6756..8223 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10518.565.1mRNA_D-dudresnayi_contig10518.565.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig10518 6755..8223 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig10518.565.1 ID=prot_D-dudresnayi_contig10518.565.1|Name=mRNA_D-dudresnayi_contig10518.565.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=107bp
LFGDRPADSGAGWEKILGKSYKLDQKKQQARLGRGKREKTQVRLYAADEA
QPSPSADEDGSIEFEPEQPDAEFEMPSSKAPPKSGAAAGTSTDGASTPAE
GEGGVGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009463DUF1087