prot_D-dudresnayi_contig10019.59.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig10019.59.1
Unique Nameprot_D-dudresnayi_contig10019.59.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length82
Homology
[Close]
BLAST of mRNA_D-dudresnayi_contig10019.59.1 vs. uniprot
Match: A0A6H5L056_9PHAE (NUC194 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L056_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 6.290e-22
Identity = 50/91 (54.95%), Postives = 64/91 (70.33%), Query Frame = 0 
Query:    1 LVAGTLGSDSPAVDPATKANALALIPFLRPCLTRKWKDYGHSTPCGSGEVDESSEGHRA----------LVLPALEEMVSRHFPIEDSREP 81
            LVAGTLGS S  VD +TKA+AL L+PFLRPCLTRK ++YGH+ P    + ++ + G  A          LV+PALEEM+S HFPI++SREP
Sbjct: 1672 LVAGTLGSSSSVVDASTKADALTLVPFLRPCLTRKARNYGHAVPHAGKQGEDGAGGAGASAGGKGKPDGLVMPALEEMMSMHFPIDNSREP 1762
[Close]
BLAST of mRNA_D-dudresnayi_contig10019.59.1 vs. uniprot
Match: D8LKP7_ECTSI (Wu:fa96e12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP7_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 9.160e-20
Identity = 49/92 (53.26%), Postives = 62/92 (67.39%), Query Frame = 0 
Query:    1 LVAGTLGSDSPAVDPATKANALALIPFLRPCLTRKWKDYGHSTPC------GSGEVDESSEGHRA----LVLPALEEMVSRHFPIEDSREPA 82
            LVA TLGS S  VD +TKA+AL L+PFLRPC+TRK ++YGH+ P       G       S G +     LV+PA+EEM+S HFPI++SREPA
Sbjct: 2011 LVARTLGSSSSVVDASTKADALTLVPFLRPCITRKARNYGHAVPHAGRQGEGGXXXXXXSAGGKGKSDGLVMPAMEEMMSMHFPIDNSREPA 2102
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10019.59.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L056_9PHAE6.290e-2254.95NUC194 domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LKP7_ECTSI9.160e-2053.26Wu:fa96e12 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10019contigD-dudresnayi_contig10019:4211..5493 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10019.59.1mRNA_D-dudresnayi_contig10019.59.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig10019 4211..5493 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig10019.59.1 ID=prot_D-dudresnayi_contig10019.59.1|Name=mRNA_D-dudresnayi_contig10019.59.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=82bp
LVAGTLGSDSPAVDPATKANALALIPFLRPCLTRKWKDYGHSTPCGSGEV
DESSEGHRALVLPALEEMVSRHFPIEDSREPA
back to top