prot_D-dudresnayi_contig10008.46.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig10008.46.1
Unique Nameprot_D-dudresnayi_contig10008.46.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length153
Homology
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BLAST of mRNA_D-dudresnayi_contig10008.46.1 vs. uniprot
Match: D8LNI7_ECTSI (SRP_SPB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNI7_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 4.800e-35
Identity = 67/91 (73.63%), Postives = 77/91 (84.62%), Query Frame = 0 
Query:    1 MKMQKKVLDVLSPQQRKQPETIRAGHRQAIADRAACTLEDVNMLLASYRELKAMHGWLSTRRKRKEKIPTSQEEMTLMAADPSGTTLVQFM 91
            MKMQKKVL+ L+P QRK PE+IR GHRQ IADRA  T EDVN  LA+YRELKAMHGWLSTRRKRKE+IP++QEE+ +MA DPSGT L+ FM
Sbjct:  131 MKMQKKVLEGLTPLQRKNPESIRHGHRQRIADRAGVTTEDVNKALAAYRELKAMHGWLSTRRKRKERIPSTQEELHVMATDPSGTMLMNFM 221
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10008.46.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNI7_ECTSI4.800e-3573.63SRP_SPB domain-containing protein n=2 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilyGENE3D1.10.260.30coord: 1..67
e-value: 3.8E-6
score: 29.0
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilySUPERFAMILY47446Signal peptide-binding domaincoord: 1..55
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 119..152
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..118
NoneNo IPR availableTMHMMTMhelixcoord: 98..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10008contigD-dudresnayi_contig10008:2864..6014 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10008.46.1mRNA_D-dudresnayi_contig10008.46.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig10008 2798..7270 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig10008.46.1 ID=prot_D-dudresnayi_contig10008.46.1|Name=mRNA_D-dudresnayi_contig10008.46.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=153bp
MKMQKKVLDVLSPQQRKQPETIRAGHRQAIADRAACTLEDVNMLLASYRE
LKAMHGWLSTRRKRKEKIPTSQEEMTLMAADPSGTTLVQFMWDNYETFFV
VWLHVPFFFLFFSAAGEWSTCCKEKYRSVLGFILHSFCGTSMRDVRSREC
FV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036891Signal_recog_part_SRP54_M_sf