mRNA_D-dudresnayi_contig9951.28762.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9951.28762.1
Unique NamemRNA_D-dudresnayi_contig9951.28762.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
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BLAST of mRNA_D-dudresnayi_contig9951.28762.1 vs. uniprot
Match: D7FVV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVV0_ECTSI)

HSP 1 Score: 456 bits (1172), Expect = 2.860e-144
Identity = 322/640 (50.31%), Postives = 395/640 (61.72%), Query Frame = 1 
Query:   16 QVYRAFEAQFSKSMDTEIAKEARCRMREDETSNRDGSDEALYLDRILESAAEGAVSLLRELPREHLGSLRLMINQPIPSRARLDTWRLLLKHTAVRQEYELLIKQNRNSTISGQDIYITHRCQALLETGRVAARKLLPLTSRNVILMKTVLSYHHARKMSKPDQKATGDISESFVHFIVPLCAVVTRDRASVVPAGAAGGGAAPETKSGGAGASREQTIERMIEALVEMFESALEAGLKDFVE------AGGVVGXXXXXXXXXXLQNNSSSVNASSGSSDAKVPANGDPKGGNDGEERGDGDAKV-PAWVGVVYGVLVPRLQGLVDHVTRVHLGLDVHGGVSEEDHETNSNGGGDNDNGRRKTNDAVDKTLATTSPTT------ETAHDRGNPASTLPSDSRESARRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHANPGRTTTSANQARAALWDLLKPLMSMGLVGYLGAEECLYVWDQAVIGGFGSMLPRMTAMLLAAARGKLEACGTFARMSEALLSHCRLVSISQLQELMETYCMPSIREELRIDQNLAPDIIGPTLETATNILHCAYSKQTKLEQEVRKAHVDHVLGPPK-----EDNGKKGLTLDLSRAVERSHSRGGS 1881
            +VY+AFE+QFSKSMD EIAKEAR R+ +D T+NR+G++EA YLDRIL+SAAEGAVSLLRELPREHLGSLRLM+NQ +PSRARLD WRLLLKHTAV                             LLE+G VA+R++LPL+SRNV+LMKTVLSYHHA KM+K  QKAT +I E FVHF+VPLCAV+T    S                     + REQ I+ MIE LVEMFE ALEAGL+  V+        GV G           + ++ S   ++ +++ K          N G+ RG  D  V P WV   YGVLVP  +GL+DHVTRVHLGL V    SE +   N   G    N    ++ AV +T A+ + T       +    RG  ++T P+  R ++                      XXXXXXXXXXXXXXXXXXXXXX        T + QAR ALW LL+PL+++GLVG+LGA+ CL+ WDQAVI GFG MLPR+ AM++AAA  KL AC TFA MSEAL SH  LVS SQLQELME +CMPSIR+E+R+   L P+I GPTL+TAT+IL  AYSK+T+  QE RKAHV+H LGP +         K+ + LDLSR   R  SRG S
Sbjct:  115 KVYQAFESQFSKSMDAEIAKEARARVVQDSTANREGTEEAQYLDRILDSAAEGAVSLLRELPREHLGSLRLMLNQAVPSRARLDIWRLLLKHTAV-----------------------------LLESGSVASRRILPLSSRNVVLMKTVLSYHHACKMTKRGQKATTNIPEPFVHFLVPLCAVITGR--SSYSXXXXXXXXXXXXXXXXXXSLREQEIDIMIERLVEMFEGALEAGLEGLVDQKELPGGTGVSGSGAGGVSTTRAKKSARSPKTATRAAETKE---------NSGDGRGGADNIVLPDWVDKSYGVLVPGFRGLLDHVTRVHLGLAVAAVPSEGNKGDNGKTGDGRINTADGSSSAVGETGASNAATDGQQQQPQENQQRGQDSATQPTSPRRTSSATSRRAALLSQGQPSSEAPSLXXXXXXXXXXXXXXXXXXXXXXXXXXLPEVTES-QARVALWALLEPLVTVGLVGHLGADACLFAWDQAVIAGFGVMLPRVAAMVVAAAADKLGACLTFAVMSEALFSHAHLVSTSQLQELMEAHCMPSIRKEMRVSHKLCPEITGPTLKTATDILDSAYSKRTREAQEARKAHVEHTLGPSRGGSVHRSQTKERIQLDLSRTAVRGSSRGSS 713
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BLAST of mRNA_D-dudresnayi_contig9951.28762.1 vs. uniprot
Match: A0A6H5KX11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX11_9PHAE)

HSP 1 Score: 430 bits (1106), Expect = 1.940e-134
Identity = 323/647 (49.92%), Postives = 383/647 (59.20%), Query Frame = 1 
Query:   16 QVYRAFEAQFSKSMDTEIAKEARCRMREDETSNRDGSDEALYLDRILESAAEGAVSLLRELPREHLGSLRLMINQPIPSRARLDTWRLLLKHTAVRQEYELLIKQNRNSTISGQDIYITHRCQALLETGRVAARKLLPLTSRNVILMKTVLSYHHARKMSKPDQKATGDISESFVHFIVPLCAVVTRDRASVVPAGAAGGGAAPETKSGGAGASREQTIERMIEALVEMFESALEAGLKDFV---EAGGVVGXXXXXXXXXXLQNNSSSVNASSGSSDAKVPANGDPKGGNDGEERGDGDAKV-PAWVGVVYGVLVPRLQGLVDHVTRVHLGLDVHGGVSEEDHETNSNGGGDNDNGRRKTNDA-VDKTLATTSPTTETAHDRGNPASTLPSDSRESARRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHANPGRTTT---------------SANQARAALWDLLKPLMSMGLVGYLGAEECLYVWDQAVIGGFGSMLPRMTAMLLAAARGKLEACGTFARMSEALLSHCRLVSISQLQELMETYCMPSIREELRIDQNLAPDIIGPTLETATNILHCAYSKQTKLEQEVRKAHVDHVLGPPK-----EDNGKKGLTLDLSRAVERSHSRGGS 1881
            +VY+AFE+QFSKSMD EIAKEAR R+ +D  +NR+G++EA YLD IL+SAAEGAVSLLRELPREHLGSLRLM+NQ +PS+ARLD WRLLLKHTAV                             LLE+G VA+R++LPL+SRNV+LMKTVLSYHHA KM+K  QKAT +I ESF+HF+VPLCAV+T    S                     + REQ I+ MIE LVEMFE ALEAGL+  V   E  GV  XXXXXXXXXX                            N G+ RG  D  V P WV   YGVLVP  +GL+DHV RVHLGL V    SE         G   DNG  KT D  V+   +++S   E+                      XXXXXXXXXXXXXXXXXXX                         P  + T               + +QAR ALW LL+PL++MGLVG+LGA+ CL+ WDQAVI GFG MLPR+ AM++AAA  KLEAC TFA MSEALLSH  LVS  QLQELME +CMP IR+E+R+   L P+IIGPTL+TAT+IL  AYSK+T+  QE RKAHV+H LGP +         K+ + LDLSR   R  SRG S
Sbjct:  187 KVYQAFESQFSKSMDAEIAKEARARVVQDSAANREGTEEAQYLDHILDSAAEGAVSLLRELPREHLGSLRLMLNQAVPSKARLDIWRLLLKHTAV-----------------------------LLESGSVASRRILPLSSRNVVLMKTVLSYHHACKMTKRGQKATANIPESFLHFLVPLCAVITTK--SXXXXXXXXXXXXXXXXXXXXXSLREQEIDVMIERLVEMFEGALEAGLEGLVDPKELSGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETKE------NSGDGRGGADNIVLPDWVNKSYGVLVPGFRGLLDHVARVHLGLTVAAAPSE---------GNKGDNG--KTGDGRVNTADSSSSAVGESGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALLPQGQPSSEAPSLGKGADGVDMPSSSRTXXXXXXXXXAPLPEVTESQARVALWALLEPLVTMGLVGHLGADACLFAWDQAVIAGFGVMLPRVAAMVVAAAADKLEACLTFAVMSEALLSHAHLVSTPQLQELMEAHCMPLIRKEMRVSHKLCPEIIGPTLKTATDILDSAYSKRTREAQEARKAHVEHTLGPSRGGSVHRSQTKERIQLDLSRTAVRGSSRGSS 785
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BLAST of mRNA_D-dudresnayi_contig9951.28762.1 vs. uniprot
Match: UPI00142581CC (uncharacterized protein LOC117116216 n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142581CC)

HSP 1 Score: 71.2 bits (173), Expect = 3.350e-9
Identity = 54/188 (28.72%), Postives = 94/188 (50.00%), Query Frame = 1 
Query:   22 YRAFEAQFSKSMDTEIAKEARCRMREDETSNRDGSDEALYLDRILESAAEGAVSLLRELPREHLGSLRLMINQPIPSRARLDTWRLLLKHTAVRQEYELLIKQNRNSTISGQDIYITHRCQALLETGRVAARKLLPLTSRNVIL--MKTVLSYHHARKMSKPDQKATGDISESFVHFIVPLCAVVTRD 579
            +  F+ + SK +D ++++E    + +   +  D   + L+     +   EGA  LL++ P E    L++ +NQP+     L  W+L L++ ++ +EY  ++K+N N  +S  D+ I H+ +A L+T         PL +   IL  MK++LSYHHARK +K        + E  +   VP   V   D
Sbjct:   73 FEQFQQKLSKDVDEKLSQEVNKELLKSFPTRSDTKPQLLF-----QHVVEGASHLLKQWP-EMKSKLKIFLNQPLIPFRELS-WKLHLQNPSIAKEYCNILKRNPNDLMSVLDLEIIHKSEAALQTEPTFR----PLANNRSILHAMKSILSYHHARKQTKTP------LLEPDIMLAVPFLVVALMD 243
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BLAST of mRNA_D-dudresnayi_contig9951.28762.1 vs. uniprot
Match: UPI001EE520DF (uncharacterized protein LOC124253527 n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE520DF)

HSP 1 Score: 71.2 bits (173), Expect = 3.660e-9
Identity = 43/115 (37.39%), Postives = 65/115 (56.52%), Query Frame = 1 
Query:  145 DRILESAAEGAVSLLRELPREHLGSLRLMINQPIPSRARLDTWRLLLKHTAVRQEYELLIKQNRNSTISGQDIYITHRCQALLETGRVAARKLLPLTSRNVILMKTVLSYHHARK 489
            D +++SA EGA+SLLR  P E    L +  NQP+P   R   WRL L +  +R+EY  ++ ++  + IS  D+ I+ +C+ LL +    A   +  +      MK VLSYHHAR+
Sbjct:  105 DLVIDSAEEGALSLLRRWP-EMKAKLHVCFNQPLPEAIRQLAWRLYLNNPKLRKEYIDILNRDPRAAISPDDLEISQKCEQLLASESTFAD--IQGSVGAFYAMKAVLSYHHARQ 216
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BLAST of mRNA_D-dudresnayi_contig9951.28762.1 vs. uniprot
Match: A0A409V793_MYTGA (Uncharacterized protein (Fragment) n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A409V793_MYTGA)

HSP 1 Score: 62.8 bits (151), Expect = 2.870e-7
Identity = 41/113 (36.28%), Postives = 62/113 (54.87%), Query Frame = 1 
Query:  145 DRILESAAEGAVSLLRELPREHLGSLRLMINQPIPSRARLDTWRLLLKHTAVRQEYELLIKQNRNSTISGQDIYITHRCQALLETGRVAARKLLPLTSRNVILMKTVLSYHHA 483
            D ++ESA EGA+SLL++ P +    L + +NQP+P   R  TWRL L +T VR++Y   +  N  + IS  D  I+ +C+ LL +        L  +      MK  LSY+H+
Sbjct:   90 DLVIESAEEGALSLLKKWP-DMKNKLYICLNQPLPLHIRQLTWRLYLSNTKVRKQYIDQLNTNPRAAISMYDYDISQKCETLLNSEHTFND--LKGSVGIFYGMKATLSYYHS 199
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BLAST of mRNA_D-dudresnayi_contig9951.28762.1 vs. uniprot
Match: A0A8B6DWJ1_MYTGA (Uncharacterized protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6DWJ1_MYTGA)

HSP 1 Score: 62.8 bits (151), Expect = 9.180e-7
Identity = 41/113 (36.28%), Postives = 62/113 (54.87%), Query Frame = 1 
Query:  145 DRILESAAEGAVSLLRELPREHLGSLRLMINQPIPSRARLDTWRLLLKHTAVRQEYELLIKQNRNSTISGQDIYITHRCQALLETGRVAARKLLPLTSRNVILMKTVLSYHHA 483
            D ++ESA EGA+SLL++ P +    L + +NQP+P   R  TWRL L +T VR++Y   +  N  + IS  D  I+ +C+ LL +        L  +      MK  LSY+H+
Sbjct:  107 DLVIESAEEGALSLLKKWP-DMKNKLYICLNQPLPLHIRQLTWRLYLSNTKVRKQYIDQLNTNPRAAISMYDYDISQKCETLLNSEHTFND--LKGSVGIFYGMKATLSYYHS 216
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BLAST of mRNA_D-dudresnayi_contig9951.28762.1 vs. uniprot
Match: T0PSC9_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PSC9_SAPDV)

HSP 1 Score: 58.2 bits (139), Expect = 3.630e-5
Identity = 35/113 (30.97%), Postives = 59/113 (52.21%), Query Frame = 1 
Query: 1387 LLKPLMSMGLVGYLGAEECLYVWDQAVIGGFGSMLPRMTAMLLAAARGKLEACGTFARMSEALLSHCRLVSISQLQELMETYCMPSIREELRIDQNLAPDIIGPTLETATNIL 1725
            LL P +    VG    +  L+VWDQ  + G   +LP +TA+ L    G L    +   +  A+  H   + +S LQEL+ET+ +P+IR++L++ +    D   PT E +  ++
Sbjct:  293 LLSPFVEQLFVGIATKDVLLFVWDQLFLVGADRLLPDLTALALVDLAGPLLRAQSLDDVLRAV--HQPTLQVSTLQELLETWSLPTIRQDLQLTKE--SDFFTPTREASVPVV 401
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BLAST of mRNA_D-dudresnayi_contig9951.28762.1 vs. uniprot
Match: A0A067CV04_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CV04_SAPPC)

HSP 1 Score: 57.4 bits (137), Expect = 6.330e-5
Identity = 35/113 (30.97%), Postives = 58/113 (51.33%), Query Frame = 1 
Query: 1387 LLKPLMSMGLVGYLGAEECLYVWDQAVIGGFGSMLPRMTAMLLAAARGKLEACGTFARMSEALLSHCRLVSISQLQELMETYCMPSIREELRIDQNLAPDIIGPTLETATNIL 1725
            LL P +    VG       L+VWDQ  + G   +LP + A+ L A  G L    +   +  A+  H   + +S LQEL+ET+ +P+IR++L++ +    D   P LE+   ++
Sbjct:  294 LLTPFVEQLFVGVATKSVLLFVWDQLFLVGADRLLPDLVALALVALEGPLLRAQSLDDVLRAV--HQPTLQVSTLQELLETFSLPTIRQDLQLIKET--DFFKPALESPAPVV 402
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9951.28762.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FVV0_ECTSI2.860e-14450.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KX11_9PHAE1.940e-13449.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI00142581CC3.350e-928.72uncharacterized protein LOC117116216 n=1 Tax=Annei... [more]
UPI001EE520DF3.660e-937.39uncharacterized protein LOC124253527 n=2 Tax=Halio... [more]
A0A409V793_MYTGA2.870e-736.28Uncharacterized protein (Fragment) n=1 Tax=Mytilus... [more]
A0A8B6DWJ1_MYTGA9.180e-736.28Uncharacterized protein n=1 Tax=Mytilus galloprovi... [more]
T0PSC9_SAPDV3.630e-530.97Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A067CV04_SAPPC6.330e-530.97Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9951contigD-dudresnayi_contig9951:6047..10447 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score87.4
Seed ortholog evalue2.5e-14
Seed eggNOG ortholog157072.XP_008877317.1
EggNOG OGs2CN9E@1,2QUN2@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_002240.1
Exons7
Model size1881
Cds size1881
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930957.571083-CDS-D-dudresnayi_contig9951:6046..61631622930957.571083-CDS-D-dudresnayi_contig9951:6046..6163Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9951 6047..6163 -
1690557979.786211-CDS-D-dudresnayi_contig9951:6046..61631690557979.786211-CDS-D-dudresnayi_contig9951:6046..6163Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9951 6047..6163 -
1622930957.587926-CDS-D-dudresnayi_contig9951:6592..67571622930957.587926-CDS-D-dudresnayi_contig9951:6592..6757Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9951 6593..6757 -
1690557979.7993288-CDS-D-dudresnayi_contig9951:6592..67571690557979.7993288-CDS-D-dudresnayi_contig9951:6592..6757Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9951 6593..6757 -
1622930957.6096725-CDS-D-dudresnayi_contig9951:7177..75651622930957.6096725-CDS-D-dudresnayi_contig9951:7177..7565Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9951 7178..7565 -
1690557979.8076618-CDS-D-dudresnayi_contig9951:7177..75651690557979.8076618-CDS-D-dudresnayi_contig9951:7177..7565Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9951 7178..7565 -
1622930957.6278746-CDS-D-dudresnayi_contig9951:7850..86771622930957.6278746-CDS-D-dudresnayi_contig9951:7850..8677Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9951 7851..8677 -
1690557979.8160195-CDS-D-dudresnayi_contig9951:7850..86771690557979.8160195-CDS-D-dudresnayi_contig9951:7850..8677Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9951 7851..8677 -
1622930957.6431353-CDS-D-dudresnayi_contig9951:9065..91521622930957.6431353-CDS-D-dudresnayi_contig9951:9065..9152Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9951 9066..9152 -
1690557979.824515-CDS-D-dudresnayi_contig9951:9065..91521690557979.824515-CDS-D-dudresnayi_contig9951:9065..9152Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9951 9066..9152 -
1622930957.6645474-CDS-D-dudresnayi_contig9951:9547..97571622930957.6645474-CDS-D-dudresnayi_contig9951:9547..9757Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9951 9548..9757 -
1690557979.832987-CDS-D-dudresnayi_contig9951:9547..97571690557979.832987-CDS-D-dudresnayi_contig9951:9547..9757Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9951 9548..9757 -
1622930957.681048-CDS-D-dudresnayi_contig9951:10360..104471622930957.681048-CDS-D-dudresnayi_contig9951:10360..10447Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9951 10361..10447 -
1690557979.8412144-CDS-D-dudresnayi_contig9951:10360..104471690557979.8412144-CDS-D-dudresnayi_contig9951:10360..10447Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9951 10361..10447 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9951.28762.1prot_D-dudresnayi_contig9951.28762.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9951 6047..10447 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9951.28762.1

>prot_D-dudresnayi_contig9951.28762.1 ID=prot_D-dudresnayi_contig9951.28762.1|Name=mRNA_D-dudresnayi_contig9951.28762.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=627bp
MFLEVQVYRAFEAQFSKSMDTEIAKEARCRMREDETSNRDGSDEALYLDR
ILESAAEGAVSLLRELPREHLGSLRLMINQPIPSRARLDTWRLLLKHTAV
RQEYELLIKQNRNSTISGQDIYITHRCQALLETGRVAARKLLPLTSRNVI
LMKTVLSYHHARKMSKPDQKATGDISESFVHFIVPLCAVVTRDRASVVPA
GAAGGGAAPETKSGGAGASREQTIERMIEALVEMFESALEAGLKDFVEAG
GVVGGDGGGGGNGTLQNNSSSVNASSGSSDAKVPANGDPKGGNDGEERGD
GDAKVPAWVGVVYGVLVPRLQGLVDHVTRVHLGLDVHGGVSEEDHETNSN
GGGDNDNGRRKTNDAVDKTLATTSPTTETAHDRGNPASTLPSDSRESARR
GERSRRSSPRSPQSPRSSRSTRSTRSTRSTRSTRSTRSARSAHANPGRTT
TSANQARAALWDLLKPLMSMGLVGYLGAEECLYVWDQAVIGGFGSMLPRM
TAMLLAAARGKLEACGTFARMSEALLSHCRLVSISQLQELMETYCMPSIR
EELRIDQNLAPDIIGPTLETATNILHCAYSKQTKLEQEVRKAHVDHVLGP
PKEDNGKKGLTLDLSRAVERSHSRGGS
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mRNA from alignment at D-dudresnayi_contig9951:6047..10447-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9951.28762.1 ID=mRNA_D-dudresnayi_contig9951.28762.1|Name=mRNA_D-dudresnayi_contig9951.28762.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=4401bp|location=Sequence derived from alignment at D-dudresnayi_contig9951:6047..10447- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGTTTCTTGAAGTGCAGGTGTATCGGGCTTTTGAGGCGCAGTTCAGCAA
ATCTATGGATACCGAGATCGCGAAGGAAGCCAGGTGTGTATGTACATGTG
TATGTACGTATTCAAGATTAAGAGGACTGGCATTACTAGTTGATAGTTGG
ATGCATACCGTTGATCCGTGCCATGGGGGGGTCGTCTGAGCATAGCAGCG
GCGTGACAGCCGTGCATACATCCCATTGGGCGATCGTAATGAAGATTGAT
TGTGGGATTCCATATACGAGTACTATCACACCGTGAGCAGTATGAAGCTT
TGTGGGTGCGTCGCGCCGTGCGTAGGCAGCAAGTCGACCAAAACAAACGC
ACAACAAAGAATAAGAAGTGGTGGGTCGTACGCCGGAACGACTACATACA
GTGGTAGTAGTACTGTAGTAGTACTATCGGGACAAACAAACAGACAGTAA
TAGCGGTGTGCCATCATACTTTGCGCGTCGCGTTAGCTACCTGTTTTCGT
CTGCAACACAATACCATCACCGCCTATCCAGGCGCAGAGAACTGCGTAGA
CGCGCACACGCCGTCTTTGCTACACGCTCCGTACCATCGTACGAAAGCCC
TGATCATACCAATAATGGTACATATTTGTATCGATAGGACTACACCGTTC
CTACCTGTGTGTTGTCTTGTCGCGATGGACGCGCAGAAAGAGAATGCGCG
AGGACGAAACTTCCAATCGCGACGGCTCCGATGAAGCCCTATACCTCGAT
CGCATCCTGGAATCGGCGGCAGAAGGGGCGGTGTCCCTTCTGAGGGAGCT
CCCGCGCGAACACTTGGGGAGCTTGCGACTCATGATCAACCAACCCATTC
CGTCTCGCGCTAGGCTGGACACTTGGAGGTTGCTCCTAAAGCATACAGCG
GTAAGGTTATATACCATTCATTTTATTGGGGCGATAAGGGTACTACCTGC
TTAGCGTTGTACTTTTTACCGATATACTAGCATATATTTCCCTTATCTTT
GTGCCTTCTCTCTCGCTGTACTCTACCTCTCTGCTTCACTCACCTCCCCC
CACCTCCTTCTACATCATTTTCTTCTTCTCTCGTGGATCCGTAAAATATT
AGAGAAAAGTTAGAAGTGCCACGTTGTCGTCTGGCACTCGAAAGTCTGTC
CTCGTCTCTCACCTCCCTCTCCCCTGGATACCCTGTGTTCACTTTACGCT
GTGCTGCAATCAAAGACTGCAACAATTCGAGTCCGTGTTGGTCCGTCTCA
TCCTGATTCCTCTCGCGGATGCACTGTGTGTTGCATCCAATGTAGGTTCG
GCAAGAGTATGAGCTGCTGATCAAACAAAACCGTAACAGCACGATATCGG
GACAGGATATCTACATCACACACCGTTGTCAGGTGGGCCAGCCGCGGTGA
AGTCTCTGTTTCTCAAATGATCGAATCTAATCATAGTATCATACGCAGAT
CCAACGATGCATGCGGTAAGCCTACGCGAGACAGTAGCTGAACTACGAAA
AAGACATAAACATTAATTGCAGTTCTTGGGAAATATCATGACCGAGAACT
GTCGTCTCCCCCGAGATTTTGTGACTGTACTTGTCGTCACGACGAATCAT
GCTTCAACACGAAATACGATTACGGGTTGCGATCATTTCTCTATATGAAT
AGTGGATTTCACTTCCTCGGCAATCCCGTCCACAACCAAACAACAACGCT
AAACCGTTCCAGATAGTATCTGACACCGGCCACGTGACGGCACAACCAAC
AAACAAAAAATGATTTTTAGGCTCTGCTTGAAACCGGACGGGTCGCCGCT
CGAAAGCTCCTACCCCTCACTAGCCGGAACGTCATCCTCATGAAGACCGT
GCTGAGTTACCATCACGCCCGCAAGATGTCGAAACCCGACCAAAAAGCAA
CCGGCGACATCTCCGAATCCTTCGTCCATTTCATAGTTCCCCTCTGTGCC
GTGGTCACGAGGGACCGCGCTTCGGTTGTGCCGGCAGGCGCGGCGGGGGG
AGGGGCCGCCCCGGAGACGAAGTCGGGCGGGGCCGGTGCATCTAGAGAAC
AGACGATCGAGCGCATGATCGAAGCTCTGGTGGAAATGTTTGAGTCCGCC
CTCGAGGCCGGACTCAAGGACTTTGTAGAGGCTGGGGGGGTTGTAGGCGG
GGATGGTGGCGGAGGCGGGAACGGTACGCTGCAAAACAACAGTAGCAGTG
TCAACGCATCTAGCGGTAGCTCGGATGCTAAAGTTCCCGCGAACGGAGAC
CCCAAGGGCGGAAACGATGGGGAAGAAAGAGGAGATGGCGATGCGAAAGT
TCCTGCCTGGGTCGGGGTGGTGTACGGTGTGCTGGTGCCTCGTCTTCAAG
GCTTGGTCGATCATGTGACTCGCGTTCACCTGGGGCTCGATGTTCATGGT
GGTGTATCCGAGGAGGACCACGAGACAAACAGCAACGGCGGCGGCGACAA
CGACAATGGTAGACGCAAAACGAACGATGCGGTCGACAAAACTTTGGCGA
CGACCAGCCCCACGACGGAAACGGCTCACGACAGAGGCAACCCCGCATCA
ACCCTTCCTTCAGACAGCCGAGAGTCAGCCCGCAGGGGGGAGCGCAGGTC
AGGCAGAAGGAAGGAATCCGAACAATCTGACGCCAACAACGACAGCAGAA
GTATCAAACTAAACGACAACATCGACAGCGACAAGCACCAGGTTACCGGA
GAAGAAGAACAACAGGAAGACGGAGAACTACGACCGACGACCGAGAAAAT
GTCAAGGAACAACAGTGCAACCGCCGCCACTGCCGCCACCACCGTCGCTG
CCCCGCCCCCCCCACGTCGCCGTAGCTCCGCGCGCCGTCCGCATCAAAAC
GTGCCACGACTATCGTCAGTCGACACGTCAAGCCGTCGCAGCAGCCCTCG
TAGCCCTCAGAGCCCTCGGAGCTCTCGGAGCACCCGGAGCACCCGGAGCA
CCCGGAGCACCCGGAGCACCCGGAGCACCCGGAGCGCCAGGAGCGCCCAT
GCGAACCCTGGGCGGACGACCACATCTGCCAACCAAGCGCGCGCCGCTCT
GTGGGACCTGCTGAAGCCTCTGATGTCGATGGGACTTGTGGGGTACTTGG
GGGCGGAGGAGTGTTTGTATGTCTGGGATCAGGCGGTGATTGGAGGATTT
GGATCGATGTTGCCGAGGATGACGGCGATGCTGCTGGCGGCGGCAAGGGG
GAAGCTGGAGGCGTGTGGGACGTTCGCGAGAATGTCCGAGGCATTGCTTT
CGCACTGCCGTCTCGTCTCGGTAAGAGAAGCACAGAGAGAGCGAGAGAGA
GGGGGAGAAAGGAGGGGTGGAGGGGTAGGGATAACGAGAGAGAGAGAGCG
ACATAAAGTGGTGTGAAGATGGACGAGTAGTGCATATATCCTGTGCTCGG
GTTTTGGCGGCGGAGGTTTAGGTGACAAGTTAGTGGCAACGGCAAAGTGA
AATATCGTTTACGGATGCACAGTGATAAGGAGTCACGTTACCGTACAGCT
ACGGTACGTGAGTTCTCGTTTTCATATAAAATATTTTGCGACGTGTCTGA
GTTACTGACAGGCCCCGAAAACGACCACGAGAGACATGACGTGAACCTTA
GATTGATTCGAGGTCAATGACGAGGCAAGCGCAAACCTGACAACCCCCCC
AATCCCGTACCCCCCCCCGTGCGCTGTGTGTGCGTGGTAGATCTCTCAGC
TACAGGAGTTGATGGAGACTTACTGCATGCCGTCTATCCGTGAAGAACTA
CGAATCGACCAAAATCTCGCTCCGGACATCATAGGACCGACACTTGAGAC
AGCCACGAACATTCTGCATTGCGCTTACTCCAAGCAGACAAAGCTGGAGC
AGGAGGTGGGAAGTAACAAGCACGCCTGCATGAGTAAACAAGGATTTCGA
GGCAGCCGTATCTCGGTTTAGTTTTCGAGAGCAGGTGTGCCCACATTGGT
CGTGGTATAGGCTTTCGTAAGAGAATAACATCATATATACATAACTTTTG
CGGGAGTTTGTGCCTCCCATATTGCCTACCACGTACTGGAAAACGATCCC
TTGGGTTTATTATCTCCCCTTACCCGTCATCCTCCGTCATATAGGACGTG
TGACCAGAGGCTCGGCATGCATCCTATGGTGGCCATTTTTTTTTTAACGA
TTGAAATAACACATCTAAAAGCTCCCTGTCTCTCCGTATAGCCCGCTCCC
TCTACTTCATAATTCGTCGACACATGTAACTTGACCGACAACTGATAACA
CTCTAGATCTCCCCCGCACGACATCAAAAATTAGGTGAGAAAAGCGCACG
TAGATCACGTGCTCGGTCCGCCCAAGGAGGACAACGGAAAGAAGGGCCTT
ACACTCGATCTGTCTCGCGCCGTCGAACGCTCCCACAGCAGAGGGGGTAG
C
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9951:6047..10447-

>mRNA_D-dudresnayi_contig9951.28762.1 ID=mRNA_D-dudresnayi_contig9951.28762.1|Name=mRNA_D-dudresnayi_contig9951.28762.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=3762bp|location=Sequence derived from alignment at D-dudresnayi_contig9951:6047..10447- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGTTTCTTGAAGTGCAGGTGTATCGGGCTTTTGAGGCGCAGTTCAGCAA
ATCTATGGATACCGAGATCGCGAAGGAAGCCAGGTGTATGTTTCTTGAAG
TGCAGGTGTATCGGGCTTTTGAGGCGCAGTTCAGCAAATCTATGGATACC
GAGATCGCGAAGGAAGCCAGGTGTAGAATGCGCGAGGACGAAACTTCCAA
TCGCGACGGCTCCGATGAAGCCCTATACCTCGATCGCATCCTGGAATCGG
CGGCAGAAGGGGCGGTGTCCCTTCTGAGGGAGCTCCCGCGCGAACACTTG
GGGAGCTTGCGACTCATGATCAACCAACCCATTCCGTCTCGCGCTAGGCT
GGACACTTGGAGGTTGCTCCTAAAGCATACAGCGAGAATGCGCGAGGACG
AAACTTCCAATCGCGACGGCTCCGATGAAGCCCTATACCTCGATCGCATC
CTGGAATCGGCGGCAGAAGGGGCGGTGTCCCTTCTGAGGGAGCTCCCGCG
CGAACACTTGGGGAGCTTGCGACTCATGATCAACCAACCCATTCCGTCTC
GCGCTAGGCTGGACACTTGGAGGTTGCTCCTAAAGCATACAGCGGTTCGG
CAAGAGTATGAGCTGCTGATCAAACAAAACCGTAACAGCACGATATCGGG
ACAGGATATCTACATCACACACCGTTGTCAGGTTCGGCAAGAGTATGAGC
TGCTGATCAAACAAAACCGTAACAGCACGATATCGGGACAGGATATCTAC
ATCACACACCGTTGTCAGGCTCTGCTTGAAACCGGACGGGTCGCCGCTCG
AAAGCTCCTACCCCTCACTAGCCGGAACGTCATCCTCATGAAGACCGTGC
TGAGTTACCATCACGCCCGCAAGATGTCGAAACCCGACCAAAAAGCAACC
GGCGACATCTCCGAATCCTTCGTCCATTTCATAGTTCCCCTCTGTGCCGT
GGTCACGAGGGACCGCGCTTCGGTTGTGCCGGCAGGCGCGGCGGGGGGAG
GGGCCGCCCCGGAGACGAAGTCGGGCGGGGCCGGTGCATCTAGAGAACAG
ACGATCGAGCGCATGATCGAAGCTCTGGTGGAAATGTTTGAGTCCGCCCT
CGAGGCCGGACTCAAGGACTTTGTAGAGGCTGGGGGGGTTGTAGGCGGGG
ATGGTGGCGGAGGCGGGAACGGTACGCTGCAAAACAACAGTAGCAGTGTC
AACGCATCTAGCGGTAGCTCGGATGCTAAAGTTCCCGCGAACGGAGACCC
CAAGGGCGGAAACGATGGGGAAGAAAGAGGAGATGGCGATGCGAAAGTTC
CTGCCTGGGTCGGGGTGGTGTACGGTGTGCTGGTGCCTCGTCTTCAAGGC
TTGGTCGATCATGTGACTCGCGTTCACCTGGGGCTCGATGTTCATGGTGG
TGTATCCGAGGAGGACCACGAGACAAACAGCAACGGCGGCGGCGACAACG
ACAATGGTAGACGCAAAACGAACGATGCGGTCGACAAAACTTTGGCGACG
ACCAGCCCCACGACGGAAACGGCTCACGACAGAGGCAACCCCGCATCAAC
CCTTCCTTCAGACAGCCGAGAGTCAGCCCGCAGGGGGGAGCGCAGGCTCT
GCTTGAAACCGGACGGGTCGCCGCTCGAAAGCTCCTACCCCTCACTAGCC
GGAACGTCATCCTCATGAAGACCGTGCTGAGTTACCATCACGCCCGCAAG
ATGTCGAAACCCGACCAAAAAGCAACCGGCGACATCTCCGAATCCTTCGT
CCATTTCATAGTTCCCCTCTGTGCCGTGGTCACGAGGGACCGCGCTTCGG
TTGTGCCGGCAGGCGCGGCGGGGGGAGGGGCCGCCCCGGAGACGAAGTCG
GGCGGGGCCGGTGCATCTAGAGAACAGACGATCGAGCGCATGATCGAAGC
TCTGGTGGAAATGTTTGAGTCCGCCCTCGAGGCCGGACTCAAGGACTTTG
TAGAGGCTGGGGGGGTTGTAGGCGGGGATGGTGGCGGAGGCGGGAACGGT
ACGCTGCAAAACAACAGTAGCAGTGTCAACGCATCTAGCGGTAGCTCGGA
TGCTAAAGTTCCCGCGAACGGAGACCCCAAGGGCGGAAACGATGGGGAAG
AAAGAGGAGATGGCGATGCGAAAGTTCCTGCCTGGGTCGGGGTGGTGTAC
GGTGTGCTGGTGCCTCGTCTTCAAGGCTTGGTCGATCATGTGACTCGCGT
TCACCTGGGGCTCGATGTTCATGGTGGTGTATCCGAGGAGGACCACGAGA
CAAACAGCAACGGCGGCGGCGACAACGACAATGGTAGACGCAAAACGAAC
GATGCGGTCGACAAAACTTTGGCGACGACCAGCCCCACGACGGAAACGGC
TCACGACAGAGGCAACCCCGCATCAACCCTTCCTTCAGACAGCCGAGAGT
CAGCCCGCAGGGGGGAGCGCAGCCGTCGCAGCAGCCCTCGTAGCCCTCAG
AGCCCTCGGAGCTCTCGGAGCACCCGGAGCACCCGGAGCACCCGGAGCAC
CCGGAGCACCCGGAGCACCCGGAGCGCCAGGAGCGCCCATGCGAACCCTG
GGCGGACGACCACATCTGCCAACCAAGCGCGCGCCGCTCTGTGGGACCTG
CTGAAGCCTCTGATGTCGATGGGACTTGTGGGGTACTTGGGGGCGGAGGA
GTGTTTGTATGTCTGGGATCAGGCGGTGATTGGAGGATTTGGATCGATGT
TGCCGAGGATGACGGCGATGCTGCTGGCGGCGGCAAGGGGGAAGCTGGAG
GCGTGTGGGACGTTCGCGAGAATGTCCGAGGCATTGCTTTCGCACTGCCG
TCTCGTCTCGCCGTCGCAGCAGCCCTCGTAGCCCTCAGAGCCCTCGGAGC
TCTCGGAGCACCCGGAGCACCCGGAGCACCCGGAGCACCCGGAGCACCCG
GAGCACCCGGAGCGCCAGGAGCGCCCATGCGAACCCTGGGCGGACGACCA
CATCTGCCAACCAAGCGCGCGCCGCTCTGTGGGACCTGCTGAAGCCTCTG
ATGTCGATGGGACTTGTGGGGTACTTGGGGGCGGAGGAGTGTTTGTATGT
CTGGGATCAGGCGGTGATTGGAGGATTTGGATCGATGTTGCCGAGGATGA
CGGCGATGCTGCTGGCGGCGGCAAGGGGGAAGCTGGAGGCGTGTGGGACG
TTCGCGAGAATGTCCGAGGCATTGCTTTCGCACTGCCGTCTCGTCTCGAT
CTCTCAGCTACAGGAGTTGATGGAGACTTACTGCATGCCGTCTATCCGTG
AAGAACTACGAATCGACCAAAATCTCGCTCCGGACATCATAGGACCGACA
CTTGAGACAGCCACGAACATTCTGCATTGCGCTTACTCCAAGCAGACAAA
GCTGGAGCAGGAGATCTCTCAGCTACAGGAGTTGATGGAGACTTACTGCA
TGCCGTCTATCCGTGAAGAACTACGAATCGACCAAAATCTCGCTCCGGAC
ATCATAGGACCGACACTTGAGACAGCCACGAACATTCTGCATTGCGCTTA
CTCCAAGCAGACAAAGCTGGAGCAGGAGGTGAGAAAAGCGCACGTAGATC
ACGTGCTCGGTCCGCCCAAGGAGGACAACGGAAAGAAGGGCCTTACACTC
GATCTGTCTCGCGCCGTCGAACGCTCCCACAGCAGAGGGGGTAGCGTGAG
AAAAGCGCACGTAGATCACGTGCTCGGTCCGCCCAAGGAGGACAACGGAA
AGAAGGGCCTTACACTCGATCTGTCTCGCGCCGTCGAACGCTCCCACAGC
AGAGGGGGTAGC
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