mRNA_D-dudresnayi_contig9922.28735.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9922.28735.1
Unique NamemRNA_D-dudresnayi_contig9922.28735.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig9922.28735.1 vs. uniprot
Match: A0A7S3HNA6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNA6_9STRA)

HSP 1 Score: 214 bits (546), Expect = 2.310e-57
Identity = 120/241 (49.79%), Postives = 165/241 (68.46%), Query Frame = 1
Query:  550 SVKFRDEDDRVMRLIYLEQVYTAIQSCSWAHKTDLWRRARVPIIHLTHRNSVQCDVCINMPQHSTVVVVRGLQERSGPALFVLSAFLKIFLKQLSLDMPFTGGLGSYKLYVLIAKHIERHPEHVADKLAPRLGELLLSFLEFYGDRRNLHADVVVEMAGAETVSFERTSKVHEIRMAFEKAHSVLRGAEHRRQQRLLSGKEDAAAALAGNRRPSGSMLAGLLNAAHLARLRNQLRARCHRY 1272
            +V+  +++ R  +L  L ++Y  I+S +W  + +  + ARVPI++LTHRN V+CDV ++M Q +T +VVR L +R GPAL  LSAFLKI+L QL LD PFTGGLGSYKLYVL+A+HIER PE +A   A  LG LL+SFL+FY  R+N+H   VVE+AGAE +SF+RT KV+++R+AFEKA  VL  A   R         D +A     R+ S S L  LLN  +L++ R Q+R++CH+Y
Sbjct:  261 AVRMSEQEARKEKLEILAKLYKTIKSMAWVQRIEFRKHARVPILNLTHRNGVECDVSLDMSQQATSLVVRSLLQRCGPALAKLSAFLKIYLNQLGLDAPFTGGLGSYKLYVLLARHIEREPE-LAQTQA--LGPLLVSFLKFYSHRKNMHEGTVVEVAGAEAISFDRTQKVNQLRLAFEKAFLVLTKAHIER-------PADKSAHSYLERQLSSSQLGTLLNTENLSQTRMQMRSKCHKY 491          
BLAST of mRNA_D-dudresnayi_contig9922.28735.1 vs. uniprot
Match: D0N1R8_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N1R8_PHYIT)

HSP 1 Score: 95.5 bits (236), Expect = 6.210e-18
Identity = 80/271 (29.52%), Postives = 123/271 (45.39%), Query Frame = 1
Query:  214 TSLTNELRLFSDYVKLDEQEEEARNILLHDVEITTQSVFPNAYIEAFGSFPVGLSTFLSDLDVTI----LGVDQPRAQLQGCVEMKDG-NCGTAEPRADRDNKRSSEDTGVKMGSDVSVKFRDEDDRVMRLIYLEQVYTAIQSCSWAHKTDLWRRARVPIIH-LTHRNSVQCDVCINMPQHST------VVVVRGLQERSGPALFVLSAFLKIFLKQLSLDMPFTGGLGSYKLYVLIAKHIERHPEHVADKLAPRLGELLLSFLEFYGDRR 990
            T +  ELRLF+  V L  QE + R  +  DV     S + NA ++ +GS   GL TF SDLD+T+    L   QP   +     +      GT     + D  R  + T     S  +   R    RV+R +        ++S     +     +A+VPI+  L  +  +  D+ +N     T        +V+ LQ   G     +  F+K FL Q  LD PFTGGLGS++LY+++A   +R+      K    +  LLL+F E +G+R+
Sbjct:   40 TPMDTELRLFAAKVALSSQERQLRTTVFEDVRDLITSAYQNATVKLYGSSSTGLDTFRSDLDITVGNITLSPSQPWPPVVSSFSLNLALPVGTMASEDNADITRRVQPTAA---SHWNPTLRRRKLRVLRALQF-----LLKSQRPHFQVKCLHKAKVPILMVLDTKTKLSIDIGVNRELFETSEHGRSTCLVQRLQSTLGAPFTTIIMFMKEFLHQFDLDKPFTGGLGSFRLYMMVAYIFQRNSSKQKTK---SVSSLLLAFFELFGNRK 299          
BLAST of mRNA_D-dudresnayi_contig9922.28735.1 vs. uniprot
Match: A0A8K1FS66_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FS66_PYTOL)

HSP 1 Score: 95.9 bits (237), Expect = 1.480e-17
Identity = 85/292 (29.11%), Postives = 130/292 (44.52%), Query Frame = 1
Query:  214 TSLTNELRLFSDYVKLDEQEEEARNILLHDVEITTQSVFPNAYIEAFGSFPVGLSTFLSDLDVTILGVDQPRAQLQGCVEMKDGNCGTAEPRA--------DRDNKRS----------SEDTGVKMGSDV----SVKFRDEDDRVMRLIYLEQVYTAIQSCSWAHKTDL----WRRARVPIIHLTHRNS-VQCDVCINMPQHS------TVVVVRGLQERSGPALFVLSAFLKIFLKQLSLDMPFTGGLGSYKLYVLIAKHIERHPEHVADKLAPRLGELLLSFLEFYGDRR 990
            + L  E+  F+ +V L ++E   RN + ++++    +VFP A+++ +GS   GL TF SDLD+T+ G  +  A L    ++        +  A        D D + S          S   G   G  V    S   +   +  +R   L Q+   +Q     H+ D       +AR+PI+ +    S V  D+ +N           T  +V  LQ   GP    +  FLK FL Q  LD PFTGGLGSY+LY+++A          A  L P    +LL FLE +G+R+
Sbjct:  155 SDLDAEIMAFARFVSLTDEERAFRNRIFYEIKHLILAVFPGAHVKLYGSSSSGLETFRSDLDITVGGDLRVTASLGEIPDVSSAVISDEDDSASDHVVEDSDEDEETSFSLNLAIPGASMSIGNNGGQPVRRAASAPNKSPWNPTLRREKLRQL-RLLQQLLNVHRPDYRVKCLPKARIPILMVEDPQSGVSIDIGVNRESFQASDHGRTTALVTDLQSALGPMYIAVVVFLKEFLHQFELDKPFTGGLGSYRLYMMVAYIFTARVSRKAPTLTP--SRMLLMFLEVFGNRQ 443          
BLAST of mRNA_D-dudresnayi_contig9922.28735.1 vs. uniprot
Match: A0A2P4YEN4_9STRA (PAP2-like protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YEN4_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 2.250e-17
Identity = 78/288 (27.08%), Postives = 133/288 (46.18%), Query Frame = 1
Query:  193 EQDINFPTSLTNELRLFSDYVKLDEQEEEARNILLHDVEITTQSVFPNAYIEAFGSFPVGLSTFLSDLDVTILGV-DQPRAQLQGCVEMKDGNCGTAEPRADRDNKRSSEDTGVKMGSDVSVKFRDEDDRVM--------------RLIYLEQVYTAIQSCSWAHKTDLWRRARVPIIH-LTHRNSVQCDVCINMP-----QHS-TVVVVRGLQERSGPALFVLSAFLKIFLKQLSLDMPFTGGLGSYKLYVLIAKHIERHPEHVADKLAPRLGELLLSFLEFYGDRR 990
            E D N   S+  EL++F+  V L  QE++ R     D+     S F +A ++ +GS   GL TF SDLD+T+  +   P+  ++                 D +    S +  + +G+  S+   D   RV+              +L  L  +   ++S     +     +A++PI+  L  +  +  D+ +N       +H  +  + +GLQ   G     L  FLK FL Q  LD PFTGGLGS++LY+++A   +R+    A+K    +  LLL+F E +G+++
Sbjct:   53 ESDAN--GSMDEELKMFAKRVALSPQEKQLRTRTFEDIRDLISSAFQHATVQLYGSSSTGLDTFRSDLDITVGNMTSMPKVVVEXXXXXXXXXXXXX---XDEEEASFSLNLALPVGTAASIDNADITRRVLPSAPSHWNPTLRRRKLRDLRALQFLLKSQRPHFQVKCLHKAKIPILMVLDTKTKLSIDIGVNRESFEASEHGRSTSLAQGLQGTLGAPFTTLVMFLKEFLHQFELDKPFTGGLGSFRLYMMVAYIFQRNISKRANKQQLPVSSLLLAFFELFGNKK 335          
BLAST of mRNA_D-dudresnayi_contig9922.28735.1 vs. uniprot
Match: G5AF47_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AF47_PHYSP)

HSP 1 Score: 94.0 bits (232), Expect = 2.270e-17
Identity = 77/269 (28.62%), Postives = 124/269 (46.10%), Query Frame = 1
Query:  229 ELRLFSDYVKLDEQEEEARNILLHDVEITTQSVFPNAYIEAFGSFPVGLSTFLSDLDVTILGVDQPRAQLQGCVEMKDG-------NCGTAEPRADRDNKRSSEDTGVKMGSDVSVKFRDEDDRVMRLI-YLEQVYTAIQSCSWAHKTDLWRRARVPIIH-LTHRNSVQCDVCINMP-----QHS-TVVVVRGLQERSGPALFVLSAFLKIFLKQLSLDMPFTGGLGSYKLYVLIAKHIERHPEHVADKLAPRLGELLLSFLEFYGDRR 990
            ELR F++ V L  QE++ R  +  DV     S F +A ++ +GS   GL TF SDLD+T+  +    A       ++           GTA    + D  R  + T     S  +   R    RV+R + +L +           HK      A++PI+  L  +  +  D+ +N       +H  +  +   LQ   G     +  FLK FL Q  LD PFTGGLGS+++Y+++A   +R+     +K  P +  LLL+F E +G+++
Sbjct:   45 ELRAFAERVALSPQEKQLRTRVFEDVRDLISSAFQDATVQLYGSSSTGLDTFRSDLDITVGNISLSAASQPWPTVVESSFSLNLALPVGTAASEDNADITRRVQPTAA---SHWNPTLRRRKIRVLRALQFLLKAQRPHFQVKCLHK------AKIPILMVLDTKTKLSIDIGVNREAFEASEHGRSTSLAHRLQNTLGAPFTTMVMFLKEFLHQFELDKPFTGGLGSFRVYMMVAYIFQRYSSKRKNKPQPPVSTLLLAFFELFGNKK 304          
BLAST of mRNA_D-dudresnayi_contig9922.28735.1 vs. uniprot
Match: H3H389_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H389_PHYRM)

HSP 1 Score: 92.8 bits (229), Expect = 1.030e-16
Identity = 81/307 (26.38%), Postives = 135/307 (43.97%), Query Frame = 1
Query:  202 INFPTSLTNELRLFSDYVKLDEQEEEARNILLHDVEITTQSVFPNAYIEAFGSFPVGLSTFLSDLDVTILGVDQPRAQLQGCVEMKDGNCG---------------TAEPRADRDNKRSSEDTGVKMGSDVSVKFRDEDDRVM--------------RLIYLEQVYTAIQSCSWAHKTDLWRRARVPIIH-LTHRNSVQCDVCIN-----MPQHS-TVVVVRGLQERSGPALFVLSAFLKIFLKQLSLDMPFTGGLGSYKLYVLIAKHIERHPEHVADKLAPRLGELLLSFLEFYGDRRN---LHAD 1005
            I+  TS+  ELR F+  V L  +E + R  + +DV+    S F +A ++ +GS   GL TF SDLD+T+ G+    +Q    V +                       + + D +    S +  + +G+  SV   D   RV               +L  L  +   ++S     +     +A++PI+  L  +  +  D+ +N       +H  +  + + LQ   G     +  FLK FL Q  LD PFTGGLGS++LY+++A   +R       K    +  LLL+F E +G+++    LH D
Sbjct:   85 ISGETSMDAELRSFAQRVALSSKERQLRTRVFNDVKDLISSAFQDATVQLYGSSSTGLDTFRSDLDITVGGITLSSSQPLPTVVLXXXXXXXXXXXXXXXXXXVEDVRDAQPDEEESSFSLNLALPVGTVASVDNADITRRVQPTAASHWNPTLRRRKLRALRALQFLLKSQRPHFQVKCLHKAKIPILMVLDTKTKLSIDIGVNGEAFDASEHGRSTSLAQRLQNTLGAPFTTMVMFLKEFLHQFDLDKPFTGGLGSFRLYMMVAYIFQRSGSKRKKKRQTAVSSLLLAFFELFGNKKTPKFLHED 391          
BLAST of mRNA_D-dudresnayi_contig9922.28735.1 vs. uniprot
Match: A0A225WLI3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WLI3_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 2.110e-16
Identity = 79/290 (27.24%), Postives = 135/290 (46.55%), Query Frame = 1
Query:  214 TSLTNELRLFSDYVKLDEQEEEARNILLHDVEITTQSVFPNAYIEAFGSFPVGLSTFLSDLDVTILGVDQPRAQLQGCV-EMKDGNCGTAEPRADRDNKRSSEDTGVKMGSDVSVKFRDEDDRVM--------------RLIYLEQVYTAIQSCSWAHKTDLWRRARVPIIH-LTHRNSVQCDVCINMP-----QHS-TVVVVRGLQERSGPALFVLSAFLKIFLKQLSLDMPFTGGLGSYKLYVLIAKHIERH-PEHVADKLAPRLGELLLSFLEFYGDRRN---LHAD 1005
            T +  ELR F++ V L  QE+E R  +  D+     S F +A ++ +GS   GL TF SDLD+T+  +     ++   V E  + N     P   ++    S +  + +G+  S    D   RV               ++  L  +   ++S     +     +A++PI+  L  +  +  D+ +N       +H  +  + + LQ+  G     +  FLK FL Q  LD PFTGGLGS++LY+++A   +R   +H   +  P +  LLL+F E +G+++    LH D
Sbjct:   39 TPMDQELRRFAERVALSSQEKEVRTRVFEDIRDLISSAFQHATVQLYGSSSTGLDTFRSDLDITVGNMTLSPQEIPTVVMEENEENV----PVLMQEEASFSLNLALPVGTAASADNADITRRVQPTAASHWNPTLRRRKIRELRALQFLLKSQRPHFQVKCLHKAKIPILMVLDTKTKLSIDIGVNREAFEASEHGRSTSLAQKLQDTLGAPFTTMVMFLKEFLHQFELDKPFTGGLGSFRLYMMVAYIFQRSGKKHKKQQQLP-VSSLLLAFFELFGNKKQPNFLHED 323          
BLAST of mRNA_D-dudresnayi_contig9922.28735.1 vs. uniprot
Match: W2R2E9_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2R2E9_PHYPN)

HSP 1 Score: 91.7 bits (226), Expect = 2.460e-16
Identity = 80/299 (26.76%), Postives = 135/299 (45.15%), Query Frame = 1
Query:  214 TSLTNELRLFSDYVKLDEQEEEARNILLHDVEITTQSVFPNAYIEAFGSFPVGLSTFLSDLDVTILGVDQPRAQLQGCV----------EMKDGNCGTAEP-RADRDNKRSSEDTGVKMGSDVSVKFRDEDDRVM--------------RLIYLEQVYTAIQSCSWAHKTDLWRRARVPIIH-LTHRNSVQCDVCINMPQHS------TVVVVRGLQERSGPALFVLSAFLKIFLKQLSLDMPFTGGLGSYKLYVLIAKHIERHPEHVADKLAPRLGELLLSFLEFYGDRRN---LHAD 1005
            T +  E++ F+  V L  QE + R  +  D+     S F +A ++ +GS   GL TF SDLD+T+  +  P  Q+   V          E +D      +P + + +    S +  + +G+ VS    D   RV               +L  L  +   ++S     +     +A++PI+  L  +  +  D+ +N           +  +V+ LQ+  G     +  FLK FL Q  LD PFTGGLGS++LY+++A   +R+     +K    +  LLL+F E +G+R+    LH D
Sbjct:   97 TPMDKEMKAFAAKVALSPQERQLRTKVFEDLRSLISSAFQDATVKLYGSSSTGLDTFRSDLDITVGNITLPSLQMPCVVVDEEELTEEQETRDIGAEVPDPVQVEEEEFSFSLNLALPVGTVVSEDNADITRRVQPTPASHWNPALRRRKLRVLRALQLLLKSQRPHFQIKCLHKAKIPILMVLDTKTKLSIDIGVNRELFEASDLGRSTSLVQRLQDTLGVPFTTMIMFLKEFLYQFDLDKPFTGGLGSFRLYMMVAYIFQRNSSTHKNK---PVSSLLLAFFELFGNRKQPNFLHED 392          
BLAST of mRNA_D-dudresnayi_contig9922.28735.1 vs. uniprot
Match: A0A6A3P809_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P809_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 5.310e-15
Identity = 77/299 (25.75%), Postives = 130/299 (43.48%), Query Frame = 1
Query:  205 NFPTSLTNELRLFSDYVKLDEQEEEARNILLHDVEITTQSVFPNAYIEAFGSFPVGLSTFLSDLDVTILGVD-QPRAQLQGCVEMKDGN-----------------------------CGTAEPRADRDNKRSSEDTGVKMGSDVSVKFRDEDDRVMRLIYLEQVYTAIQSCSWAHKTDLWRRARVPIIH-LTHRNSVQCDVCINMP-----QHS-TVVVVRGLQERSGPALFVLSAFLKIFLKQLSLDMPFTGGLGSYKLYVLIAKHIERHPEHVADKLAPRLGELLLSFLEFYGDRR 990
            N  T +  ELR F++ V L  QE++ R+ +  DV     S + +A ++ +GS   GL TF SDLD+T+  +      + Q    +  G                               GTA    + D  R    T     S  +   R    RV+R +        ++S     +     +A++PI+  L  +  +  D+ +N       +H  +  + + LQ+  G     +  FLK FL Q  LD PFTGGLGS+++Y+++A   +R+     +K  P +  LLL+F E +G+++
Sbjct:   62 NGETPMDAELRAFTERVALSPQEKQLRSRVFEDVSDLISSAYEDATVQLYGSSSTGLDTFRSDLDITVGNISLSTGTESQSVPTVVVGEEXXXXXXXXXXXXXXXXXXTSFSLNLALPVGTAASEDNADITRRVHPTAA---SHWNPALRRRKIRVLRALQF-----LLKSQRPHFQVKCLHKAKIPILMVLDTKTKLSLDIGVNREAFEASEHGRSTSLAQRLQQTLGAPFTTMVMFLKEFLHQFELDKPFTGGLGSFRVYMMVAHIFQRYGSKRKNKPQPPVSSLLLAFFELFGNKK 352          
BLAST of mRNA_D-dudresnayi_contig9922.28735.1 vs. uniprot
Match: A0A329S5E1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S5E1_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 6.100e-15
Identity = 84/305 (27.54%), Postives = 139/305 (45.57%), Query Frame = 1
Query:  214 TSLTNELRLFSDYVKLDEQEEEARNILLHDVEITTQSVFPNAYIEAFGSFPVGLSTFLSDLDVTILGV---DQPR----------AQLQGCVEMKDGNCGT---AEP-RADRDNKRSSEDTGVKMGSDVSVKFRDEDDRVM--------------RLIYLEQVYTAIQSCSWAHKTDLWRRARVPIIH-LTHRNSVQCDVCINMP-----QHS-TVVVVRGLQERSGPALFVLSAFLKIFLKQLSLDMPFTGGLGSYKLYVLIAKHIERHPEHVADKLAPRLGELLLSFLEFYGDRRN---LHAD 1005
            T +  EL+ F+  V L  QE++ R  +  DV     S F +A ++ +GS   GL TF SDLD+T+  +    QP           A+ +G  E+  G       ++P +A+ +    S +  + +G+  S    D   RV               +L  L  +   ++S     +     +A+VPI+  L  +  +  D+ +N       +H  +  +V  LQ   G     +  FLK FL Q  LD PFTGGLGS++LY+++A   +R+     +K    +  LLL+F E +G+++    LH D
Sbjct:   88 TPMDKELKAFAARVALSSQEKQLRKKVFEDVRDLISSAFQDATVQLYGSSSTGLDTFRSDLDITVGNITLSSQPMPSVVVDEEEFAEEKGSREIGAGEMNMKRLSDPMQAEEEESSFSLNLALPVGTVASEDNADITRRVQPTAASHWNPTLRRRKLRVLRALQFLLKSQRPHFQVKCLHKAKVPILMVLDTKTKLSIDIGVNRELFEASEHGRSTSLVHKLQNTLGAPFTTMIMFLKEFLHQFELDKPFTGGLGSFRLYMMVAYIFQRNGFKHKNK---PVSSLLLAFFELFGNKKQPNFLHED 389          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9922.28735.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3HNA6_9STRA2.310e-5749.79Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
D0N1R8_PHYIT6.210e-1829.52Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
A0A8K1FS66_PYTOL1.480e-1729.11Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2P4YEN4_9STRA2.250e-1727.08PAP2-like protein n=2 Tax=Phytophthora palmivora v... [more]
G5AF47_PHYSP2.270e-1728.62Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
H3H389_PHYRM1.030e-1626.38Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A225WLI3_9STRA2.110e-1627.24Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
W2R2E9_PHYPN2.460e-1626.76Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]
A0A6A3P809_9STRA5.310e-1525.75Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A329S5E1_9STRA6.100e-1527.54Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9922contigD-dudresnayi_contig9922:2048..3613 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score101.3
Seed ortholog evalue1.2e-18
Seed eggNOG ortholog4787.PITG_04667T0
KEGG koko:K03514
KEGG Pathwayko03018,map03018
KEGG ModuleM00393
EggNOG free text desc.polynucleotide adenylyltransferase activity
EggNOG OGs3QE0U@4776,COG5260@1,KOG1906@2759
EC2.7.7.19
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03016,ko03019
Hectar predicted targeting categoryother localisation
Exons4
Model size1338
Cds size1308
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9922.28735.1prot_D-dudresnayi_contig9922.28735.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9922 2048..3583 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930953.8593707-CDS-D-dudresnayi_contig9922:2047..27611622930953.8593707-CDS-D-dudresnayi_contig9922:2047..2761Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9922 2048..2761 -
1690557978.27551-CDS-D-dudresnayi_contig9922:2047..27611690557978.27551-CDS-D-dudresnayi_contig9922:2047..2761Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9922 2048..2761 -
1622930953.876844-CDS-D-dudresnayi_contig9922:2830..29941622930953.876844-CDS-D-dudresnayi_contig9922:2830..2994Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9922 2831..2994 -
1690557978.2862809-CDS-D-dudresnayi_contig9922:2830..29941690557978.2862809-CDS-D-dudresnayi_contig9922:2830..2994Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9922 2831..2994 -
1622930953.8922281-CDS-D-dudresnayi_contig9922:3054..32561622930953.8922281-CDS-D-dudresnayi_contig9922:3054..3256Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9922 3055..3256 -
1690557978.2946157-CDS-D-dudresnayi_contig9922:3054..32561690557978.2946157-CDS-D-dudresnayi_contig9922:3054..3256Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9922 3055..3256 -
1622930953.906029-CDS-D-dudresnayi_contig9922:3355..35831622930953.906029-CDS-D-dudresnayi_contig9922:3355..3583Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9922 3356..3583 -
1690557978.3027165-CDS-D-dudresnayi_contig9922:3355..35831690557978.3027165-CDS-D-dudresnayi_contig9922:3355..3583Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9922 3356..3583 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930953.9236214-UTR-D-dudresnayi_contig9922:3583..36131622930953.9236214-UTR-D-dudresnayi_contig9922:3583..3613Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9922 3584..3613 -
1690557978.3110647-UTR-D-dudresnayi_contig9922:3583..36131690557978.3110647-UTR-D-dudresnayi_contig9922:3583..3613Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9922 3584..3613 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9922.28735.1

>prot_D-dudresnayi_contig9922.28735.1 ID=prot_D-dudresnayi_contig9922.28735.1|Name=mRNA_D-dudresnayi_contig9922.28735.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=436bp
MVKFHGFSKRKAVHKSIKPTLAIDFIEQPSHPVSFINQLPYAVLDKNVLW
LSISEQDINFPTSLTNELRLFSDYVKLDEQEEEARNILLHDVEITTQSVF
PNAYIEAFGSFPVGLSTFLSDLDVTILGVDQPRAQLQGCVEMKDGNCGTA
EPRADRDNKRSSEDTGVKMGSDVSVKFRDEDDRVMRLIYLEQVYTAIQSC
SWAHKTDLWRRARVPIIHLTHRNSVQCDVCINMPQHSTVVVVRGLQERSG
PALFVLSAFLKIFLKQLSLDMPFTGGLGSYKLYVLIAKHIERHPEHVADK
LAPRLGELLLSFLEFYGDRRNLHADVVVEMAGAETVSFERTSKVHEIRMA
FEKAHSVLRGAEHRRQQRLLSGKEDAAAALAGNRRPSGSMLAGLLNAAHL
ARLRNQLRARCHRYLSHRAVSCSAGKSHSSLGEGEG
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mRNA from alignment at D-dudresnayi_contig9922:2048..3613-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9922.28735.1 ID=mRNA_D-dudresnayi_contig9922.28735.1|Name=mRNA_D-dudresnayi_contig9922.28735.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1566bp|location=Sequence derived from alignment at D-dudresnayi_contig9922:2048..3613- (Desmarestia dudresnayi DdudBR16 monoicous)
GAACATTTTTCCAAGGGAACTGTTGTTCCTATGGTGAAGTTTCATGGGTT TTCAAAGAGGAAAGCGGTACATAAATCTATTAAGCCAACACTTGCAATCG ACTTTATAGAGCAGCCCAGTCATCCTGTGAGCTTCATCAACCAGCTGCCC TATGCTGTATTGGACAAGAATGTGCTTTGGTTGTCAATTTCTGAGCAAGA CATAAACTTTCCTACTTCATTGACTAATGAGCTCAGATTATTTTCTGACT ACGTTAAGGTATGGCTTTATTTTGAATTTATAATTGGCATCATGTCGATT AAGTTACCTAACCCGACCGTAACTACTGGTACTTATATCATACTGCTGTA CCTGCAGTTGGATGAACAAGAAGAAGAAGCGCGTAATATACTCTTGCATG ATGTTGAAATTACAACTCAAAGTGTATTTCCGAATGCGTATATAGAAGCG TTTGGATCATTTCCAGTAGGGCTGTCGACTTTTCTGAGCGACCTTGATGT CACCATACTGGGTGTAGACCAGCCCCGAGCCCAGCTTCAGGGATGTGTTG AAATGAAAGGTAATGGTAATGATTGCTTTTTATTTCCAACGAAACCCACT GATCACATTGTTTCATCAGACGGTAATTGCGGCACGGCGGAACCCAGAGC AGACAGGGACAACAAGCGCAGCTCCGAGGATACCGGCGTGAAGATGGGCT CTGATGTTAGTGTCAAATTCCGCGACGAGGATGACCGAGTTATGCGCCTC ATCTATCTCGAGCAGGTCTATACTGCTATCCAGGTATACCGTTGATTCCT GCGTAGCTTGTTTGTTCATTCCATGTTGAGCGTACTGTACCTGCACTGTC AGAGCTGCAGCTGGGCTCACAAGACTGACCTTTGGCGACGAGCTCGTGTT CCCATCATCCACCTGACCCACCGTAACTCTGTGCAGTGCGATGTGTGCAT AAACATGCCGCAGCACAGCACCGTGGTGGTTGTGCGCGGCCTGCAGGAGC GCAGTGGACCCGCTCTGTTTGTGTTGTCTGCTTTCTTGAAAATATTTTTG AAACAGCTTTCCCTGGACATGCCCTTCACTGGCGGACTGGGCTCGTACAA GCTCTACGTGCTCATCGCCAAGCACATTGAGCGCCACCCCGAGCACGTGG CCGACAAGCTGGCGCCCCGACTGGGAGAGTTGCTGCTGAGCTTCCTGGAG TTCTACGGAGACCGGCGGAACCTGCATGCCGATGTTGTGGTGGAGATGGC GGGGGCGGAGACAGTGAGCTTCGAGCGCACCAGCAAGGTGCACGAGATCA GAATGGCATTCGAAAAGGCGCACTCCGTGCTGCGGGGCGCTGAACACAGA CGCCAACAGCGTTTGCTGTCTGGTAAGGAGGATGCCGCTGCTGCGTTGGC TGGGAACAGGCGGCCCTCTGGGTCCATGCTGGCAGGTCTGCTTAACGCCG CGCATCTGGCCAGGTTGCGCAACCAGCTGCGAGCCCGCTGCCACCGGTAC CTCAGCCACAGGGCAGTGAGCTGCAGCGCAGGTAAGTCTCACTCTAGTCT GGGAGAGGGCGAGGGG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9922:2048..3613-

>mRNA_D-dudresnayi_contig9922.28735.1 ID=mRNA_D-dudresnayi_contig9922.28735.1|Name=mRNA_D-dudresnayi_contig9922.28735.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2616bp|location=Sequence derived from alignment at D-dudresnayi_contig9922:2048..3613- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGTGAAGTTTCATGGGTTTTCAAAGAGGAAAGCGGTACATAAATCTAT
TAAGCCAACACTTGCAATCGACTTTATAGAGCAGCCCAGTCATCCTGTGA
GCTTCATCAACCAGCTGCCCTATGCTGTATTGGACAAGAATGTGCTTTGG
TTGTCAATTTCTGAGCAAGACATAAACTTTCCTACTTCATTGACTAATGA
GCTCAGATTATTTTCTGACTACGTTAAGATGGTGAAGTTTCATGGGTTTT
CAAAGAGGAAAGCGGTACATAAATCTATTAAGCCAACACTTGCAATCGAC
TTTATAGAGCAGCCCAGTCATCCTGTGAGCTTCATCAACCAGCTGCCCTA
TGCTGTATTGGACAAGAATGTGCTTTGGTTGTCAATTTCTGAGCAAGACA
TAAACTTTCCTACTTCATTGACTAATGAGCTCAGATTATTTTCTGACTAC
GTTAAGTTGGATGAACAAGAAGAAGAAGCGCGTAATATACTCTTGCATGA
TGTTGAAATTACAACTCAAAGTGTATTTCCGAATGCGTATATAGAAGCGT
TTGGATCATTTCCAGTAGGGCTGTCGACTTTTCTGAGCGACCTTGATGTC
ACCATACTGGGTGTAGACCAGCCCCGAGCCCAGCTTCAGGGATGTGTTGA
AATGAAAGTTGGATGAACAAGAAGAAGAAGCGCGTAATATACTCTTGCAT
GATGTTGAAATTACAACTCAAAGTGTATTTCCGAATGCGTATATAGAAGC
GTTTGGATCATTTCCAGTAGGGCTGTCGACTTTTCTGAGCGACCTTGATG
TCACCATACTGGGTGTAGACCAGCCCCGAGCCCAGCTTCAGGGATGTGTT
GAAATGAAAGACGGTAATTGCGGCACGGCGGAACCCAGAGCAGACAGGGA
CAACAAGCGCAGCTCCGAGGATACCGGCGTGAAGATGGGCTCTGATGTTA
GTGTCAAATTCCGCGACGAGGATGACCGAGTTATGCGCCTCATCTATCTC
GAGCAGGTCTATACTGCTATCCAGACGGTAATTGCGGCACGGCGGAACCC
AGAGCAGACAGGGACAACAAGCGCAGCTCCGAGGATACCGGCGTGAAGAT
GGGCTCTGATGTTAGTGTCAAATTCCGCGACGAGGATGACCGAGTTATGC
GCCTCATCTATCTCGAGCAGGTCTATACTGCTATCCAGAGCTGCAGCTGG
GCTCACAAGACTGACCTTTGGCGACGAGCTCGTGTTCCCATCATCCACCT
GACCCACCGTAACTCTGTGCAGTGCGATGTGTGCATAAACATGCCGCAGC
ACAGCACCGTGGTGGTTGTGCGCGGCCTGCAGGAGCGCAGTGGACCCGCT
CTGTTTGTGTTGTCTGCTTTCTTGAAAATATTTTTGAAACAGCTTTCCCT
GGACATGCCCTTCACTGGCGGACTGGGCTCGTACAAGCTCTACGTGCTCA
TCGCCAAGCACATTGAGCGCCACCCCGAGCACGTGGCCGACAAGCTGGCG
CCCCGACTGGGAGAGTTGCTGCTGAGCTTCCTGGAGTTCTACGGAGACCG
GCGGAACCTGCATGCCGATGTTGTGGTGGAGATGGCGGGGGCGGAGACAG
TGAGCTTCGAGCGCACCAGCAAGGTGCACGAGATCAGAATGGCATTCGAA
AAGGCGCACTCCGTGCTGCGGGGCGCTGAACACAGACGCCAACAGCGTTT
GCTGTCTGGTAAGGAGGATGCCGCTGCTGCGTTGGCTGGGAACAGGCGGC
CCTCTGGGTCCATGCTGGCAGGTCTGCTTAACGCCGCGCATCTGGCCAGG
TTGCGCAACCAGCTGCGAGCCCGCTGCCACCGGTACCTCAGCCACAGGGC
AGTGAGCTGCAGCGCAGGTAAGTCTCACTCTAGTCTGGGAGAGGGCGAGG
GGAGCTGCAGCTGGGCTCACAAGACTGACCTTTGGCGACGAGCTCGTGTT
CCCATCATCCACCTGACCCACCGTAACTCTGTGCAGTGCGATGTGTGCAT
AAACATGCCGCAGCACAGCACCGTGGTGGTTGTGCGCGGCCTGCAGGAGC
GCAGTGGACCCGCTCTGTTTGTGTTGTCTGCTTTCTTGAAAATATTTTTG
AAACAGCTTTCCCTGGACATGCCCTTCACTGGCGGACTGGGCTCGTACAA
GCTCTACGTGCTCATCGCCAAGCACATTGAGCGCCACCCCGAGCACGTGG
CCGACAAGCTGGCGCCCCGACTGGGAGAGTTGCTGCTGAGCTTCCTGGAG
TTCTACGGAGACCGGCGGAACCTGCATGCCGATGTTGTGGTGGAGATGGC
GGGGGCGGAGACAGTGAGCTTCGAGCGCACCAGCAAGGTGCACGAGATCA
GAATGGCATTCGAAAAGGCGCACTCCGTGCTGCGGGGCGCTGAACACAGA
CGCCAACAGCGTTTGCTGTCTGGTAAGGAGGATGCCGCTGCTGCGTTGGC
TGGGAACAGGCGGCCCTCTGGGTCCATGCTGGCAGGTCTGCTTAACGCCG
CGCATCTGGCCAGGTTGCGCAACCAGCTGCGAGCCCGCTGCCACCGGTAC
CTCAGCCACAGGGCAGTGAGCTGCAGCGCAGGTAAGTCTCACTCTAGTCT
GGGAGAGGGCGAGGGG
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