mRNA_D-dudresnayi_contig992.28732.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig992.28732.1
Unique NamemRNA_D-dudresnayi_contig992.28732.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig992.28732.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig992contigD-dudresnayi_contig992:24981..26083 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-16_002430.3
Hectar predicted targeting categoryother localisation
Exons2
Model size284
Cds size282
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930953.4231143-CDS-D-dudresnayi_contig992:24980..250311622930953.4231143-CDS-D-dudresnayi_contig992:24980..25031Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig992 24981..25031 +
1690557978.1427352-CDS-D-dudresnayi_contig992:24980..250311690557978.1427352-CDS-D-dudresnayi_contig992:24980..25031Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig992 24981..25031 +
1622930953.4404655-CDS-D-dudresnayi_contig992:25852..260831622930953.4404655-CDS-D-dudresnayi_contig992:25852..26083Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig992 25853..26083 +
1690557978.152489-CDS-D-dudresnayi_contig992:25852..260831690557978.152489-CDS-D-dudresnayi_contig992:25852..26083Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig992 25853..26083 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig992.28732.1prot_D-dudresnayi_contig992.28732.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig992 24981..26083 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig992.28732.1

>prot_D-dudresnayi_contig992.28732.1 ID=prot_D-dudresnayi_contig992.28732.1|Name=mRNA_D-dudresnayi_contig992.28732.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=94bp
GKKKECTAPTGLSAEQQERIAKNKRIALQRLAERKQQRQFQQQQQQQQQQ
QQQHAQHSSQPQFWQQNRAQAQSQARTQLQHVRITGDNNSAAAV
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mRNA from alignment at D-dudresnayi_contig992:24981..26083+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig992.28732.1 ID=mRNA_D-dudresnayi_contig992.28732.1|Name=mRNA_D-dudresnayi_contig992.28732.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1103bp|location=Sequence derived from alignment at D-dudresnayi_contig992:24981..26083+ (Desmarestia dudresnayi DdudBR16 monoicous)
GGGAAGAAAAAAGAATGCACGGCGCCAACTGGTTTATCGGCGGAACAGCA
GGTATGTGGGTGATTAGATAGATAACAAGGGTGTTGTATAGTGTCTTCTC
TTCCTCTTCTTTTTGGTGGTACCTACGTATTGTTATGTGTGATATGTTGC
GCCACACACGGGATTTTATTGTTTATGTTGGCGCGCGTGTTATATTCTGG
GCCGATCGTTCAATGTTTTCCCGCCAAAATGGGATGTTTTTGAGGGACGT
GGGGGACGGGGGGGGGGTGAAGGTAGTGGTGGGGGTTAAGATTAGGACGT
TGTGAGTATAAATATGGCAATTGGTATTTTGGGGGGCTGCACGGGCGCGA
TGTTTATATATGCGCCCTTGTTGTTTATGACGTGAAAACTTGGCAAAATG
CGCAGTGTCCCTGCTTGTTTATTTATCGAGCGACGGCGCGACGACTGTAC
TCTATACGATAATAGTTTGTGTCCTGTTTCACGCTTTCCAGTTCGAGTGG
CCGGCGCGATGAGGGTAAGCACGAACCGCCCCCCCCCGGATCGGTTGTTT
ACTTAATTTTCGTGGATAATCGATACTCTTGAAAGTGAGCCGTGTCATCC
CTTACTGTTGTTTGGAAGACTCCGTTATTCTTCGTGGCCGTCTTAACCCG
CGGAGATTGGAGGAAATACCGGCAGCCGGAGGTTCGTGTCGAGGGTCTAC
TACACTTGAAATATATACTTTGTCAGCTGCTCAAAATTTGAGCAGCTTGG
TAACATTAGTTGGAATCCCGCCGAGAATAAGAAATACGCCAGAGTGCAAA
AAAACTATCCCCGATCCCCTGACCCTCGCCCCCCCCTCCGTCCCCGCCGC
TGGTCGTCGCGTGCGGCCTTAGGAGCGGATCGCTAAAAACAAGCGTATAG
CGTTGCAAAGGCTAGCCGAGAGGAAACAGCAGAGGCAATTCCAACAGCAA
CAGCAGCAGCAGCAGCAGCAACAACAACAACACGCACAGCACTCTAGTCA
GCCGCAGTTTTGGCAACAGAATCGCGCACAAGCACAATCACAAGCACGAA
CACAACTACAGCACGTGCGGATTACTGGGGATAACAATAGTGCTGCTGCT
GTT
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Coding sequence (CDS) from alignment at D-dudresnayi_contig992:24981..26083+

>mRNA_D-dudresnayi_contig992.28732.1 ID=mRNA_D-dudresnayi_contig992.28732.1|Name=mRNA_D-dudresnayi_contig992.28732.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=564bp|location=Sequence derived from alignment at D-dudresnayi_contig992:24981..26083+ (Desmarestia dudresnayi DdudBR16 monoicous)
GGGAAGAAAAAAGAATGCACGGCGCCAACTGGTTTATCGGCGGAACAGCA
GGGGAAGAAAAAAGAATGCACGGCGCCAACTGGTTTATCGGCGGAACAGC
AGGAGCGGATCGCTAAAAACAAGCGTATAGCGTTGCAAAGGCTAGCCGAG
AGGAAACAGCAGAGGCAATTCCAACAGCAACAGCAGCAGCAGCAGCAGCA
ACAACAACAACACGCACAGCACTCTAGTCAGCCGCAGTTTTGGCAACAGA
ATCGCGCACAAGCACAATCACAAGCACGAACACAACTACAGCACGTGCGG
ATTACTGGGGATAACAATAGTGCTGCTGCTGTTGAGCGGATCGCTAAAAA
CAAGCGTATAGCGTTGCAAAGGCTAGCCGAGAGGAAACAGCAGAGGCAAT
TCCAACAGCAACAGCAGCAGCAGCAGCAGCAACAACAACAACACGCACAG
CACTCTAGTCAGCCGCAGTTTTGGCAACAGAATCGCGCACAAGCACAATC
ACAAGCACGAACACAACTACAGCACGTGCGGATTACTGGGGATAACAATA
GTGCTGCTGCTGTT
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