mRNA_D-dudresnayi_contig9902.28721.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig9902.28721.1 vs. uniprot
Match: A0A482SF61_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SF61_9ARCH) HSP 1 Score: 90.1 bits (222), Expect = 1.360e-21 Identity = 43/68 (63.24%), Postives = 48/68 (70.59%), Query Frame = 1 Query: 1 CGEAVETLYVEFSPTNIRLTRCSKCGKVADKYVEYELLLVLLDTVLHRKPAVRHLLYNRMSDSALQVS 204 CG VE L VE+ N RLTRCS CG+VADKY+E ELLLVLLD LHRKPA RHL++NR VS Sbjct: 11 CGLTVENLLVEYGEKNFRLTRCSHCGQVADKYIECELLLVLLDVFLHRKPAFRHLMFNRYHPVVAHVS 78
BLAST of mRNA_D-dudresnayi_contig9902.28721.1 vs. uniprot
Match: A0A6A7G8X0_9CRUS (Protein ARV n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G8X0_9CRUS) HSP 1 Score: 87.4 bits (215), Expect = 6.620e-19 Identity = 45/98 (45.92%), Postives = 65/98 (66.33%), Query Frame = 1 Query: 1 CGEAVETLYVEFSPTNIRLTRCSKCGKVADKYVEYELLLVLLDTVLHRKPAVRHLLYNRMS--DSALQVSLLLLL-YFLCLHYIYIKTFQCVKHRNQS 285 CG AV +Y ++ N+RLTRC C + ADKY+EYE +LVLLD +LHR RHLL+NR+ +S + V+LL L+ F+C Y+K F+ K+ ++S Sbjct: 6 CGSAVNHVYRDYGKGNVRLTRCQICHEYADKYIEYEFMLVLLDLILHRHQVYRHLLFNRIDYHESGVDVTLLKLIPAFICFD-AYLKWFRLAKYYDES 102
BLAST of mRNA_D-dudresnayi_contig9902.28721.1 vs. uniprot
Match: A0A022QUF1_ERYGU (Protein ARV n=2 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QUF1_ERYGU) HSP 1 Score: 79.3 bits (194), Expect = 2.930e-17 Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = 1 Query: 1 CGEAVETLYVEFSPTNIRLTRCSKCGKVADKYVEYELLLVLLDTVLHRKPAVRHLLYNRMSDS 189 CG ++TLY+++SP NIRL RC KC VAD+Y+E EL+++++D +LH+ A RHL YN S Sbjct: 10 CGFPIKTLYIQYSPGNIRLMRCGKCKAVADEYIECELMILVIDLILHKPKAFRHLFYNMFSKE 72
BLAST of mRNA_D-dudresnayi_contig9902.28721.1 vs. uniprot
Match: A0A2P5WGF2_GOSBA (Protein ARV n=1 Tax=Gossypium barbadense TaxID=3634 RepID=A0A2P5WGF2_GOSBA) HSP 1 Score: 80.9 bits (198), Expect = 3.460e-17 Identity = 40/107 (37.38%), Postives = 66/107 (61.68%), Query Frame = 1 Query: 1 CGEAVETLYVEFSPTNIRLTRCSKCGKVADKYVEYELLLVLLDTVLHRKPAVRHLLYNRMSDSALQVSLLLLLY-----FLCLHYIYIKTFQCVKHRNQSVGFLWEA 306 CG ++TL+V++SP NIRL +C C VAD+Y+E EL++VL+D +LH+ A RH+L+N ++ +L+ ++ FLC I++ +K Q G LW++ Sbjct: 8 CGFRIKTLFVQYSPGNIRLMKCVNCKAVADEYIECELMIVLIDLILHKPKAYRHVLFNVLNHERTHFQMLMDVFLGNYMFLCSFLFAIRSL--LKTSAQFSGLLWKS 112
BLAST of mRNA_D-dudresnayi_contig9902.28721.1 vs. uniprot
Match: A0A7N0U589_KALFE (Protein ARV n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0U589_KALFE) HSP 1 Score: 79.7 bits (195), Expect = 6.470e-17 Identity = 33/67 (49.25%), Postives = 50/67 (74.63%), Query Frame = 1 Query: 1 CGEAVETLYVEFSPTNIRLTRCSKCGKVADKYVEYELLLVLLDTVLHRKPAVRHLLYNRMSDSALQV 201 CG V L+V++SP NIRL +C KC +VAD+Y+E E+++VL+D +LH+ A RHLLYN ++ +L + Sbjct: 8 CGSQVAKLFVQYSPGNIRLMKCPKCKQVADEYIECEIMIVLIDLILHKTKAYRHLLYNVLNQRSLDL 74
BLAST of mRNA_D-dudresnayi_contig9902.28721.1 vs. uniprot
Match: A0A0V0GNM9_SOLCH (Protein ARV n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0GNM9_SOLCH) HSP 1 Score: 78.6 bits (192), Expect = 8.750e-17 Identity = 34/71 (47.89%), Postives = 49/71 (69.01%), Query Frame = 1 Query: 1 CGEAVETLYVEFSPTNIRLTRCSKCGKVADKYVEYELLLVLLDTVLHRKPAVRHLLYNRMSDSALQVSLLL 213 CG +V TLY+++SP NIRL +C C VAD+Y+E EL+++++D +LH+ A RHL YNR L +LL Sbjct: 20 CGFSVTTLYIQYSPGNIRLMKCGNCKAVADEYIECELMILVIDLILHKIKAYRHLFYNRFERETLHNEVLL 90
BLAST of mRNA_D-dudresnayi_contig9902.28721.1 vs. uniprot
Match: A0A1Q3C9U6_CEPFO (Protein ARV (Fragment) n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3C9U6_CEPFO) HSP 1 Score: 79.7 bits (195), Expect = 1.050e-16 Identity = 36/83 (43.37%), Postives = 56/83 (67.47%), Query Frame = 1 Query: 1 CGEAVETLYVEFSPTNIRLTRCSKCGKVADKYVEYELLLVLLDTVLHRKPAVRHLLYNRMSDSALQVSLLLLLYFLCLHYIYI 249 C AV+TL+V++SP NI L +C C +AD+Y+E E +++L+D +LH+ A RHLLYN + L V + ++ Y+L L +I I Sbjct: 9 CRFAVKTLFVQYSPGNIHLIKCENCKSIADEYIECEFMILLIDLILHKPKAYRHLLYNVLHQDTLNVEVNIVFYYLILLWILI 91
BLAST of mRNA_D-dudresnayi_contig9902.28721.1 vs. uniprot
Match: A0A2C9VSF3_MANES (Protein ARV n=2 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9VSF3_MANES) HSP 1 Score: 79.3 bits (194), Expect = 1.700e-16 Identity = 32/71 (45.07%), Postives = 52/71 (73.24%), Query Frame = 1 Query: 1 CGEAVETLYVEFSPTNIRLTRCSKCGKVADKYVEYELLLVLLDTVLHRKPAVRHLLYNRMSDSALQVSLLL 213 CG ++TL+V++SP NIRL +C C +AD+Y+E EL+++L+D +LH+ A RHLLYN ++ +++ LL Sbjct: 8 CGFGIKTLFVQYSPGNIRLMKCENCKAIADEYIECELMIILIDLILHKPKAYRHLLYNVLNQQTVELEGLL 78
BLAST of mRNA_D-dudresnayi_contig9902.28721.1 vs. uniprot
Match: A0A022R568_ERYGU (Protein ARV n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022R568_ERYGU) HSP 1 Score: 80.1 bits (196), Expect = 1.700e-16 Identity = 34/71 (47.89%), Postives = 49/71 (69.01%), Query Frame = 1 Query: 1 CGEAVETLYVEFSPTNIRLTRCSKCGKVADKYVEYELLLVLLDTVLHRKPAVRHLLYNRMSDSALQVSLLL 213 CG ++TLY+++SP NIRL RC KC VAD+Y+E EL+++++D +LH+ A RHL YN S + LL Sbjct: 21 CGFPIKTLYIQYSPGNIRLMRCGKCKAVADEYIECELMILVIDLILHKPKAFRHLFYNMFSKETVNFESLL 91
BLAST of mRNA_D-dudresnayi_contig9902.28721.1 vs. uniprot
Match: A0A1D6L6R5_MAIZE (Protein ARV n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6L6R5_MAIZE) HSP 1 Score: 77.8 bits (190), Expect = 1.760e-16 Identity = 32/61 (52.46%), Postives = 47/61 (77.05%), Query Frame = 1 Query: 1 CGEAVETLYVEFSPTNIRLTRCSKCGKVADKYVEYELLLVLLDTVLHRKPAVRHLLYNRMS 183 CG V+TL+V++SP NIRL +C KC VAD Y+E E +++L+D VLH+ A RH+L+N++S Sbjct: 16 CGGRVKTLFVQYSPGNIRLMKCDKCKAVADPYIECEFMIILIDLVLHKTRAYRHVLFNKLS 76 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9902.28721.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9902.28721.1 >prot_D-dudresnayi_contig9902.28721.1 ID=prot_D-dudresnayi_contig9902.28721.1|Name=mRNA_D-dudresnayi_contig9902.28721.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=103bp CGEAVETLYVEFSPTNIRLTRCSKCGKVADKYVEYELLLVLLDTVLHRKPback to top mRNA from alignment at D-dudresnayi_contig9902:3600..3908- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig9902.28721.1 ID=mRNA_D-dudresnayi_contig9902.28721.1|Name=mRNA_D-dudresnayi_contig9902.28721.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=309bp|location=Sequence derived from alignment at D-dudresnayi_contig9902:3600..3908- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig9902:3600..3908- >mRNA_D-dudresnayi_contig9902.28721.1 ID=mRNA_D-dudresnayi_contig9902.28721.1|Name=mRNA_D-dudresnayi_contig9902.28721.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=618bp|location=Sequence derived from alignment at D-dudresnayi_contig9902:3600..3908- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |