mRNA_D-dudresnayi_contig9893.28707.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9893.28707.1
Unique NamemRNA_D-dudresnayi_contig9893.28707.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig9893.28707.1 vs. uniprot
Match: D7FZE5_ECTSI (Aminopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE5_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 2.570e-88
Identity = 142/172 (82.56%), Postives = 151/172 (87.79%), Query Frame = 1
Query:    1 MAGKADGRVLLPLDVEPVEYRIKLTPDMERFTCLGEQEVDLDILEETSTVSLHSKEIYIMEASFIPTGKGGPG-------KATGAVSISFDLKLTTATFTFPEPLAKGKGVLKLSFQCAINNQMAGFYRSGYTTVEGESRVMASTQFEALDARRCFPCWDEPARKAVFQVQL 495
            MA KADGRVLLP DVEPVEYRIKLTPDM++FTC GEQEVD++ILEETS+VSLHSKEIYIMEASF+P  +GG G       K  GA +ISFDLKL TATFTFPEPLAKGKG LKLSFQC INNQMAGFYRSGYTTV+GE RVMASTQFEALDARRCFPCWDEPARKAVFQV L
Sbjct:    1 MASKADGRVLLPSDVEPVEYRIKLTPDMQKFTCRGEQEVDVEILEETSSVSLHSKEIYIMEASFVPIPEGGEGAAAAEQGKPVGASAISFDLKLCTATFTFPEPLAKGKGTLKLSFQCDINNQMAGFYRSGYTTVDGEKRVMASTQFEALDARRCFPCWDEPARKAVFQVTL 172          
BLAST of mRNA_D-dudresnayi_contig9893.28707.1 vs. uniprot
Match: A0A835ZQ24_9STRA (Aminopeptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ24_9STRA)

HSP 1 Score: 193 bits (491), Expect = 2.230e-54
Identity = 93/162 (57.41%), Postives = 122/162 (75.31%), Query Frame = 1
Query:   10 KADGRVLLPLDVEPVEYRIKLTPDMERFTCLGEQEVDLDILEETSTVSLHSKEIYIMEASFIPTGKGGPGKATGAVSISFDLKLTTATFTFPEPLAKGKGVLKLSFQCAINNQMAGFYRSGYTTVEGESRVMASTQFEALDARRCFPCWDEPARKAVFQVQL 495
            KA GRVLLP  VEP +Y ++L PD+ERF+  G  +VD++++  T+T+++HSK+I + E SF P  +G    A  A++++FDLKLTT + TFP  L  G G L++ F   +NNQMAGFYRSGYT  +GE R+MASTQFEALDARRCFPCWDEPARKAVF+V +
Sbjct:    5 KAAGRVLLPPHVEPRKYNLRLEPDLERFSYEGLVKVDVEVVTSTNTITVHSKDIAVHEVSFTPGQQGSAPIA--AIALAFDLKLTTLSMTFPTDLPAGPGTLEIRFTGTLNNQMAGFYRSGYTAADGEKRMMASTQFEALDARRCFPCWDEPARKAVFEVTM 164          
BLAST of mRNA_D-dudresnayi_contig9893.28707.1 vs. uniprot
Match: A0A7S2V380_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V380_9STRA)

HSP 1 Score: 176 bits (446), Expect = 2.570e-50
Identity = 84/162 (51.85%), Postives = 110/162 (67.90%), Query Frame = 1
Query:   10 KADGRVLLPLDVEPVEYRIKLTPDMERFTCLGEQEVDLDILEETSTVSLHSKEIYIMEASFIPTGKGGPGKATGAVSISFDLKLTTATFTFPEPLAKGKGVLKLSFQCAINNQMAGFYRSGYTTVEGESRVMASTQFEALDARRCFPCWDEPARKAVFQVQL 495
            K  GRVLLP DV P++Y I+L PD+ +FT  GE+++D+ ++  TS + LHS E+YI  ASF     G   K        F+ KL T TF F +P+  G+GVL +SF   +NNQMAGFYRS YT + G+S+ MASTQFE LDAR+CFPCWDEPA KA F++ +
Sbjct:   23 KTSGRVLLPADVAPIKYDIRLEPDLVKFTFDGEEKIDVQVVSATSKIVLHSNELYIKSASFF----GSDEKKVSPTETVFNSKLQTLTFVFVDPIPVGEGVLSISFMGHLNNQMAGFYRSKYTDINGKSKYMASTQFEPLDARKCFPCWDEPALKASFELSI 180          
BLAST of mRNA_D-dudresnayi_contig9893.28707.1 vs. uniprot
Match: A0A7S1XT33_9STRA (Aminopeptidase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XT33_9STRA)

HSP 1 Score: 176 bits (445), Expect = 5.000e-48
Identity = 95/163 (58.28%), Postives = 111/163 (68.10%), Query Frame = 1
Query:   10 KADGRVLLPLDVEPVEYRIKLTPDMERFTCLGEQEVDLDILEETSTVSLHSKEIYIMEASFIPTGKGGPGKATGAVSISFDLKLTTATFTFP-EPLAKGKGVLKLSFQCAINNQMAGFYRSGYTTVEGESRVMASTQFEALDARRCFPCWDEPARKAVFQVQL 495
            KA GRV+LP  +EP +Y +K+TPDMERF   GE  V+LD  E TS V +HSKE++I EA          G    AV IS+DLKLTT T     E  A GK VL +++   +NNQMAGFYRS YT   GE RVMASTQFEALDARR FPCWDEPARKAVF++ L
Sbjct:    5 KAAGRVVLPPCLEPTKYILKITPDMERFVFDGEMSVELDCREATSEVVVHSKELHIREACV-----EHDGGVANAVGISYDLKLTTCTIKLDGEVPAGGKAVLNVNYMGYLNNQMAGFYRSNYTAANGERRVMASTQFEALDARRAFPCWDEPARKAVFELTL 162          
BLAST of mRNA_D-dudresnayi_contig9893.28707.1 vs. uniprot
Match: A0A7S2QD15_9DINO (Aminopeptidase n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2QD15_9DINO)

HSP 1 Score: 175 bits (444), Expect = 7.220e-48
Identity = 89/164 (54.27%), Postives = 112/164 (68.29%), Query Frame = 1
Query:    4 AGKADGRVLLPLDVEPVEYRIKLTPDMERFTCLGEQEVDLDILEETSTVSLHSKEIYIMEASFIPTGKGGPGKATGAVSISFDLKLTTATFTFPEPLAKGKGVLKLSFQCAINNQMAGFYRSGYTTVEGESRVMASTQFEALDARRCFPCWDEPARKAVFQVQL 495
            A KA GRVLLP  V P  Y I+L PD+ERF   GE +V++++ E TS V++H+KE+  + ASF     G   +A GAV I+   K TT TF FPE L  GKGV+ + +   +NNQMAGFYRS Y  + G ++ MASTQFE+LDARRCFPCWDEP RKAVF + L
Sbjct:    3 ADKAQGRVLLPDAVLPYRYSIRLVPDLERFVFDGEVKVEVEVHEATSEVTMHAKELQFLSASFQSAEAGA--EAAGAVEINQRCKDTTVTFVFPEVLPVGKGVVTVKYVGVLNNQMAGFYRSSYKDIHGNTKTMASTQFESLDARRCFPCWDEPGRKAVFGMTL 164          
BLAST of mRNA_D-dudresnayi_contig9893.28707.1 vs. uniprot
Match: W7T4K9_9STRA (Aminopeptidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4K9_9STRA)

HSP 1 Score: 167 bits (424), Expect = 3.880e-45
Identity = 83/162 (51.23%), Postives = 112/162 (69.14%), Query Frame = 1
Query:   10 KADGRVLLPLDVEPVEYRIKLTPDMERFTCLGEQEVDLDILEETSTVSLHSKEIYIMEASFIPTGKGGPGKATGAVSISFDLKLTTATFTFPEPLAKGKGVLKLSFQCAINNQMAGFYRSGYTTVEGESRVMASTQFEALDARRCFPCWDEPARKAVFQVQL 495
            KA GRVLLP +V P++Y + L  D+++F   G ++V+L ++EET+T+ LHSKE+ I   +F P G    GK    + ++ +L+  T  FTF  PL  G G L + +Q + NNQMAGFYRSGYT + G+S+VM STQFE+LDARR FPCWDEP  KAVF+V L
Sbjct:    7 KAKGRVLLPKNVVPLKYDLTLDVDLDKFIFDGNEKVELQVVEETATIVLHSKELLIKHVTFTPQG----GKPIELIGLAHNLRHHTLAFTFASPLPVGLGELHVVYQGSHNNQMAGFYRSGYTDIAGKSKVMVSTQFESLDARRAFPCWDEPGVKAVFEVTL 164          
BLAST of mRNA_D-dudresnayi_contig9893.28707.1 vs. uniprot
Match: A0A7S2WWA9_9STRA (Aminopeptidase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WWA9_9STRA)

HSP 1 Score: 167 bits (423), Expect = 5.280e-45
Identity = 86/165 (52.12%), Postives = 107/165 (64.85%), Query Frame = 1
Query:    1 MAGKADGRVLLPLDVEPVEYRIKLTPDMERFTCLGEQEVDLDILEETSTVSLHSKEIYIMEASFIPTGKGGPGKATGAVSISFDLKLTTATFTFPEPLAKGKGVLKLSFQCAINNQMAGFYRSGYTTVEGESRVMASTQFEALDARRCFPCWDEPARKAVFQVQL 495
            MA K +GRVLLP  VEP +Y I + PD+E F   G + V ++++  T  + LH++E+Y+ EASF P      G A  AV IS  LK   AT  F + L  GKGVL + F+  INNQMAGFYRS Y   +G  + M STQFEALDARR FPCWDEPARKA F++ L
Sbjct:    4 MANKGEGRVLLPPCVEPEDYAIDIVPDLENFVFSGSETVAVNVVSPTIQIKLHARELYLSEASFKPA----QGDALEAVEISVHLKDHVATLIFADILPVGKGVLSIKFRGEINNQMAGFYRSQYVDAQGNKKWMGSTQFEALDARRAFPCWDEPARKATFKLTL 164          
BLAST of mRNA_D-dudresnayi_contig9893.28707.1 vs. uniprot
Match: A0A7S4SYT1_9DINO (Aminopeptidase n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SYT1_9DINO)

HSP 1 Score: 166 bits (419), Expect = 1.880e-44
Identity = 82/164 (50.00%), Postives = 108/164 (65.85%), Query Frame = 1
Query:    4 AGKADGRVLLPLDVEPVEYRIKLTPDMERFTCLGEQEVDLDILEETSTVSLHSKEIYIMEASFIPTGKGGPGKATGAVSISFDLKLTTATFTFPEPLAKGKGVLKLSFQCAINNQMAGFYRSGYTTVEGESRVMASTQFEALDARRCFPCWDEPARKAVFQVQL 495
            A KA+GRVLLP    P  Y I+L PD++RF   G  E+ LD+ E T  ++LH+KE+ +   +F    +G    +    +I+++LK TT  F F E L  G G LK+++   +NNQMAGFYRS Y  + G  ++MASTQFE+LDARRCFPCWDEPARKAVF V L
Sbjct:    8 AAKAEGRVLLPDAALPSRYEIRLEPDLDRFIFDGTVEITLDVREATDELTLHAKELSVTSTTFTAASEGATSMSPS--TITYNLKETTVKFGFDEVLPVGPGSLKITYIGELNNQMAGFYRSSYNDINGTKKIMASTQFESLDARRCFPCWDEPARKAVFAVTL 169          
BLAST of mRNA_D-dudresnayi_contig9893.28707.1 vs. uniprot
Match: A0A7S2XU37_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XU37_9STRA)

HSP 1 Score: 154 bits (389), Expect = 3.550e-42
Identity = 83/165 (50.30%), Postives = 107/165 (64.85%), Query Frame = 1
Query:   10 KADGRVLLPLDVEPVEYRIKLTPDMERFTCLGEQEVDLDILEETS--TVSLHSKEIYIMEASFIPTGKGGPGKATGAVSISFDLKLTTATFTFPEPL-AKGKGVLKLSFQCAINNQMAGFYRSGYTTVEGESRVMASTQFEALDARRCFPCWDEPARKAVFQVQL 495
            KA+GRVLLP  + P  Y + +TPD+E FT  GE ++DLDI  + +   +++H+KE+  + ASF+       G    A  I  + K TT TF F   + A  K  L + +   +NNQMAGFYRS YT + GES+VMASTQFE+LDARR FPCWDEPARKAVF V L
Sbjct:   30 KAEGRVLLPSTIIPNRYDLVVTPDLEAFTFKGEVKIDLDISADVTGNQITMHAKELCFISASFVDL----TGVVQAAEEIRVNTKDTTVTFVFDSQIPAMSKISLTIEYTGFLNNQMAGFYRSSYTDIHGESKVMASTQFESLDARRAFPCWDEPARKAVFGVTL 190          
BLAST of mRNA_D-dudresnayi_contig9893.28707.1 vs. uniprot
Match: A0A7S0B177_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0B177_9DINO)

HSP 1 Score: 154 bits (390), Expect = 5.980e-42
Identity = 80/158 (50.63%), Postives = 102/158 (64.56%), Query Frame = 1
Query:   22 RVLLPLDVEPVEYRIKLTPDMERFTCLGEQEVDLDILEETSTVSLHSKEIYIMEASFIPTGKGGPGKATGAVSISFDLKLTTATFTFPEPLAKGKGVLKLSFQCAINNQMAGFYRSGYTTVEGESRVMASTQFEALDARRCFPCWDEPARKAVFQVQL 495
            RVLLP DV P +Y I L PD+ERF   G  ++  D+   T  V +H+KE+ I  A F P G      A  A  I F +K TT +  F E L  GKG L++ F+  +N++MAGFYRS YT  +GE + +A+TQFEA+DARRCFPCWDEP+RKAVF V L
Sbjct:    7 RVLLPSDVVPEQYDITLEPDLERFIFDGIVKITCDVQVATDKVVVHAKELLISSAQFAPAGSES---AMEACEIMFKVKETTVSMGFEEVLPVGKGELQIKFRGMLNDKMAGFYRSQYTNSKGEKKYLATTQFEAIDARRCFPCWDEPSRKAVFVVTL 161          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9893.28707.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZE5_ECTSI2.570e-8882.56Aminopeptidase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A835ZQ24_9STRA2.230e-5457.41Aminopeptidase n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A7S2V380_9STRA2.570e-5051.85Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S1XT33_9STRA5.000e-4858.28Aminopeptidase n=1 Tax=Phaeomonas parva TaxID=1244... [more]
A0A7S2QD15_9DINO7.220e-4854.27Aminopeptidase n=1 Tax=Brandtodinium nutricula Tax... [more]
W7T4K9_9STRA3.880e-4551.23Aminopeptidase n=2 Tax=Monodopsidaceae TaxID=42507... [more]
A0A7S2WWA9_9STRA5.280e-4552.12Aminopeptidase n=1 Tax=Rhizochromulina marina TaxI... [more]
A0A7S4SYT1_9DINO1.880e-4450.00Aminopeptidase n=2 Tax=Alexandrium monilatum TaxID... [more]
A0A7S2XU37_9STRA3.550e-4250.30Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S0B177_9DINO5.980e-4250.63Hypothetical protein (Fragment) n=1 Tax=Pyrodinium... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9893contigD-dudresnayi_contig9893:5365..10746 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score285.0
Seed ortholog evalue2.2e-74
Seed eggNOG ortholog2880.D7FZE5
Preferred nameNPEPPS
KEGG koko:K08776,ko:K14800,ko:K17756
GOsGO:0001666,GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006508,GO:0006518,GO:0006807,GO:0006810,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0008270,GO:0009056,GO:0009628,GO:0009914,GO:0009926,GO:0009987,GO:0010013,GO:0010817,GO:0016020,GO:0016787,GO:0019538,GO:0031090,GO:0031406,GO:0033218,GO:0033293,GO:0033554,GO:0034641,GO:0036094,GO:0036293,GO:0036294,GO:0042221,GO:0042277,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043171,GO:0043177,GO:0043226,GO:0043227,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044422,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0060918,GO:0065007,GO:0065008,GO:0070006,GO:0070011,GO:0070482,GO:0070887,GO:0071453,GO:0071456,GO:0071704,GO:0071944,GO:0097159,GO:0140096,GO:1901564,GO:1901565,GO:1901575
EggNOG free text desc.metalloaminopeptidase activity
EggNOG OGsCOG0308@1,KOG1046@2759
EC1.1.3.20
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko03009
Hectar predicted targeting categoryother localisation
Exons4
Model size495
Cds size495
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9893.28707.1prot_D-dudresnayi_contig9893.28707.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9893 5365..10746 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930949.9491396-CDS-D-dudresnayi_contig9893:5364..54061622930949.9491396-CDS-D-dudresnayi_contig9893:5364..5406Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9893 5365..5406 +
1690557976.871523-CDS-D-dudresnayi_contig9893:5364..54061690557976.871523-CDS-D-dudresnayi_contig9893:5364..5406Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9893 5365..5406 +
1622930949.971503-CDS-D-dudresnayi_contig9893:8960..90441622930949.971503-CDS-D-dudresnayi_contig9893:8960..9044Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9893 8961..9044 +
1690557976.8820453-CDS-D-dudresnayi_contig9893:8960..90441690557976.8820453-CDS-D-dudresnayi_contig9893:8960..9044Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9893 8961..9044 +
1622930949.99568-CDS-D-dudresnayi_contig9893:9518..97401622930949.99568-CDS-D-dudresnayi_contig9893:9518..9740Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9893 9519..9740 +
1690557976.8902974-CDS-D-dudresnayi_contig9893:9518..97401690557976.8902974-CDS-D-dudresnayi_contig9893:9518..9740Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9893 9519..9740 +
1622930950.0153205-CDS-D-dudresnayi_contig9893:10599..107461622930950.0153205-CDS-D-dudresnayi_contig9893:10599..10746Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9893 10600..10746 +
1690557976.8983185-CDS-D-dudresnayi_contig9893:10599..107461690557976.8983185-CDS-D-dudresnayi_contig9893:10599..10746Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9893 10600..10746 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9893.28707.1

>prot_D-dudresnayi_contig9893.28707.1 ID=prot_D-dudresnayi_contig9893.28707.1|Name=mRNA_D-dudresnayi_contig9893.28707.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=165bp
MAGKADGRVLLPLDVEPVEYRIKLTPDMERFTCLGEQEVDLDILEETSTV
SLHSKEIYIMEASFIPTGKGGPGKATGAVSISFDLKLTTATFTFPEPLAK
GKGVLKLSFQCAINNQMAGFYRSGYTTVEGESRVMASTQFEALDARRCFP
CWDEPARKAVFQVQL
back to top

mRNA from alignment at D-dudresnayi_contig9893:5365..10746+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9893.28707.1 ID=mRNA_D-dudresnayi_contig9893.28707.1|Name=mRNA_D-dudresnayi_contig9893.28707.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=5382bp|location=Sequence derived from alignment at D-dudresnayi_contig9893:5365..10746+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGCAGGCAAGGCAGATGGACGCGTTCTTCTTCCTCTCGATGTGAGTAT CTTCCCTTGCTCTGTCTTGCAACGCATGTTATGGTGTGCTTTTGTTTCGT CTTTTTTGCAGTTTCCACAACACACAGCTTTTTTTGTTCAAGAGCTCTCG GACAGAGCAGGGGGTATCCGGACCCAAGGCTGTGAACGAAGTTGCAAAAA TGCAGGGGGCAGCTTTGGTGACATCTACTGGTTCCCTGAATTTTTACCTG TGTGACGGTGGCTCACATGTACCTATTGTCTCAGCTGGTTTGTTCGTCCC GTTTACTGAACACAGGAAGGTTCTTGCTCAATGTGGGCGGCTGAACGGTT GTTGTGCGGTTGATACTTGGTGTGATAGAACGAAACGACTCTATTTTATT GTGTTTTTGTACACACCTGCTGTGAGCTGTGAGCTTCGATAGTCGTTTGC CGCGCAAGTCATGGAGACATACATAGATGAGTTTTCCCCCGTGCACACTT GTCGTCAATACTACTATGATAGTGATTTTGTGATGGGTTGATAGGCAATA CCCCTTAAGATGCGCACAGCTGTATTTTGATTTGATTTGATCTATCGTCA CGTTAGTCCGATCCCTCGGGCCCGTGGTCACAGCAGGTACACGGAGCATT CTATACCATAATACCCATATACATATCAAACAGACCGGGAAAGCCTGGAG ATAGAAACAAAAAGTTATGGATTGGTTCCGGGTGATAGCCCAGAATCCCG ACCCACAACACGTGAAGAAGAGGCACACATCGCGATGCGTCACTGGTACT GCGATAACGCGTGAAGGCAGCTCAAAGTACAACAATAAACTAAAATAACT AACCCCTCGACAAATAAGCTACCACGACCACCGCTTGCACATTGGACATC GCTATGAATGTACGTACTGCAATTTTACTGTCTGAAGTCTGTCTATACCG AACCAATGTGGGCATGACTACAGCTATACTGCCTGAAGTGATGTCTGTAA CACACAGCGATGCACCAGCAACAGCAGTCAGTCGTGATCACTGCAAAGGA TCTGCTAGTATTCATAGTACAATAATTGTCTGTAGTGCTTCTTGTGTCAC CCTCTCGCACGCACGCAGAAGAAATGGAGGCGAACAACGAAATATTGAGA TCAACAAGCAGAGCAATAATACAACAAACAACAGTAGTAGTACACGGCAA CAACACCGAATGCCACGATGTACAAAGAAGATACAGTACATTTCCCTATC ATCTAGTCAGGCATGCAGCACGTCAACGTCAAACTATGGCAGGTCTAGAA ACCCGCGCGAAAGCGCTTCGGTCTAGCGTGTCCACTCGTCAAGCATGAAA ATATGCGACTATCAACGTGGCTTAAGGCCTCTGTCACCACAACCAAAGAA AGGATGATGCATCACTCATCCTACCCCTCTCCTCCTCGGTTCCGGCTCGC CTGCTCCGCTCCTGCTGTTCCGCTCCTGCTGCTGCTATTGCTGCTTTAGT GTCTCGTATGCGACTTCGTCCGCCTATCGGCGAGTATCGTCCTCGCTTTC TGTATACCGATCATTATTTCATTATTTCATTTACGTACTCGTGAAACATG GCCACATAGACCCTCCTCACTACAAGGTACAAGCTATCATAGTTTGGATT CGATCGAACTGGGCTTGGTGGCACCTGCTTGTGTTGTGCATGTTCGATAA ACCAGCACACGGTGTTGCTATGGCTACTGTCCCCCAACATTACAACAGTT TCACACGATTGTTAGATTTTTCACGCACATATGATATTCGATTAGTCTGT ATCCGTCGTAATATCAGATAGGAAAAGGGGACACTGAGGTACGAGTACGT GCCCAGCACGATGCCCGACTACAAAGACGCAAGTGTGGGATGATACGAGT AGTCCTGGGGCTTGTTACATCTTCTGGGGGGTCTGCGGTGTGAAGGACAC CAGTGGTAAATGCCTCGGGTCTCACACAAAACGGAATGCCAAAGCTAGAG ACGGGACCCGAGGGGAACTTGAACTTGTGTGTAATGAGGTCGTACTATCT ACAGTAGGGGACAGGGAGCATTTTTTTTATTGTTATTACTATTGTCGTCA CTTTAGTCCGATCCCTCGAACCCGTGGTCACAGCAGGTGCAAGGAACATA CCATCATGCCGGACACAATATATGTATCAAATAGACTGGGAAAGCCAAGA GATAGAAGAAACGAAAAGTTATGGATGGGTTCTGGGTGATAGCCCAGGAT CCCGATTCACAACACATGACTGATGAAGAAGAGGCACACATCGCAATGCG TCACTGGTACTGCGCTGACGCGTGAATGCAGCTCAAACTACTAAAAACTA ACCCCTCGACAAATATAGGTTACCACTACCACCGCTACTGCATGCAGTGT ACATCACGCTGTGGATGTACGTACCGCAGTTATACTGTCTGAAGTGCTGC CTATACCCAAACAATGCGGGCATGACTACAGCTACACTGCCTGAAGTTAC TGTCTAACACACAGCGATGCACGGGCAACAGTAGTCAGTTGTGGTCACTG CAAAAGATCTGCTAGTATTATACTTCGTAGTACAATTGTCTGAAGTGCTG CTTGAGTTACCCTCTGGCACACACGCAGAGAAAATGGAGGACGACAACGA AGTATTGAGATAAATAAGCAGAGCAATACAACAACAATAGTAGTAGTACA CGGCAACAGCAATGCCACCAGGCACAAAGAAGGTATAGTACATCTCCCTA TAATCTAGTCAGGCATATCTTACGTCAACGTCAAAGTATGGCATGTCTAG TCACCCGCGCTCACGCGCTTCGGTGTATCCACATTTTTTTCCCCATCCCT TTTATTATCTTCGCTCTATTCTTTCTCTAGCTCCATCTCTCTTCGTAACT CAGATCCGGAGTCACATAGTAGGCGCTCCTCCCGCCTCCCCACTACGGTA CGTGCCTACGTTTTTATCGCGAGAAGAGTGCAGCACTTTCTTCCCTCGTC GACTTTCATCGAATTGTGCTTACTCACGCTCTCGCATTTTCCGCGACCGA AGATGGCACAGAAAAGGGCCACCGGGAATCAAACCCCCAACTTCCGCCAA CAGAGGCAACACCCTAACCATTAGACCACTGCGCCACCCCCTATGCAACT CTTATATCAGTCCCCATGAAACCCGCACATTAGATGCCCTTGGTACCCGA GGTTTCCACTGGTTGTACTGTGCATCGACGGAATATTCCCAGATTATTCC TTGCAACTACAGTAGTATTGCACCATAAATTTGTCAATCACATGTAAGCA ACAGACTGATTACTGATTAGTGGATACAATAACAAACGAACAACAGTAGT GTACGTGTATTCTTGAAGCGTGAAGTTTCACATTTGCACGTTGCACAAGT TACGTACAGCAGCAGGCCGCACGCGCTCTCGCTTTCATACCCGCAATTAG GATAGTGCAACCGCTTGCGGTGGTGATGCGGGATCCGCTGATATTTTCGG CATGGAAATTTTTGATCCGCTCACTGCGGCGCTTTTTCGGTGATCTATGC CTCTCTCCCTTTGACAACCATGCTGCGCGATGAGGGATGAGGGCAGGTTG AACCTGTGGAGTATCGCATCAAGCTCACGCCGGACATGGAGAGGTTCACA TGCCTGGGAGAACAAGAGGTCGACCTAGACGTGAGATAAGTTGTCCTATC GTAATAATGATCACTCCACAACGCTTGACTTTTCCCCTCTGCTTCGGAGT ATGAAATGAATAGTAGTCTCCTGGAAACAATCTTTTGGATCCTATTTCGG TTTGGGACGTCCCGACTGACTGTTTTCACGTATATCGTCTACAGATATAC ACAGGCTCTGGTACTGGTTGGATATGGGACATGGGACATCCAGACACAAC GGTAGTAACGTCCTGCGTTGTTTTTTAAATACTGTATTTAACAATTGGGG ACGAAAAATTACGCGCATGTTCGCGTTGCTCGGGAAGCGCAGGAGTTCGA CGTATTGTTTGGGCGCGTGAGGCGAAGGGAAGCAGGGTTTGTTCTTTGAA ACACCTCTTTGCCGGTTTCCTACGATAGCCGCTGCAACTCGGTACCTCTC CCGCTATATATCCACCTTCGTATCCTGTAATAAAATACCGCTATTATTTG ACAGATCCTCGAGGAGACTAGCACTGTGTCTCTCCACAGCAAGGAGATCT ACATCATGGAGGCGTCTTTCATCCCCACGGGGAAAGGGGGCCCCGGAAAG GCGACGGGCGCGGTTAGCATCTCGTTCGACCTCAAGCTCACAACGGCGAC TTTCACGTTCCCCGAGCCCCTCGCCAAGGGCAAGGGCGTCCTCAAGCTCT CCTTCCAGTGCGCCATCAACAACCAGGTGAGGGGCAAAGAGAGGGTGCAC GGGCAGGGTTTTAGGTTTTGGCCCCGCCTCTATAATAGCAAGCCTCAGGC AAACAACAGACAGTAGTGACCCGGCGTTCTGGATGATGTGTGTGCGTGGG GGGTGGGTTGGCAGACATGGAGAAGGAGGCGCGGACGGGACCAACATGTC CTTGTCAAATCGGGTTGTCCGTCTGTTGAAAAGAGCATGACCTGAGGCTT TTTGGCTATGCTTGAGACCGTTTCCTGTCGCCAGACCTAGACGGAAAGGA ATGTTGCGAAGGGGGCGGGGTTGGGGGGGAGGGGCGTTATCATTTGTTGC TTTCCTTAGTCATTTGAGCATAGACCACGCATCCCTTTCGAGACGGATTG GAGCACCGTTCCTACTCCTAATAGAGGCATCTCCAACATTTGGGCGCCCT TTACAGTTTTGTCATATCTTACATAAAAACGGTGTGCTTATCTTGTCCCC TACGTATTGCATCTTTTGTTGCCGCCATCTATCATATCTCCTAGGATAGC AATCGTTTTTCTCGCTATTATCTAGTGTGGCTATGGTTTGAGGGTGGGCT CCGACCTCGATTGCACGCAAGAGTTATCCGCCGCAGGCAGCTTGGGAATG ACTCATTTTGTCTCCGTATTGTCACCGACAACAGCAAAATATGCTATTGA TACCTTAGAAAAACGCAACCCACCAAGACTGCTTGGACGTGCTGCTGTGT TGATGCTGATCCCTGGACAACGACTGCGCGTATCGACATCGTAGCGCCTC GAAATACGACCTCCTTGTATTTCGTCTCCACCTTGGCCACACTTGTTGCT TGGACTGTTTCCGAACGCGTGCCCCTGCCCGACAGATGGCTGGGTTCTAT CGGTCAGGGTACACGACCGTGGAGGGGGAGTCCAGGGTGATGGCTTCGAC ACAGTTCGAGGCGCTGGACGCGCGGCGATGTTTTCCCTGTTGGGACGAGC CTGCCCGCAAGGCTGTATTCCAGGTACAGTTG
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig9893:5365..10746+

>mRNA_D-dudresnayi_contig9893.28707.1 ID=mRNA_D-dudresnayi_contig9893.28707.1|Name=mRNA_D-dudresnayi_contig9893.28707.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=990bp|location=Sequence derived from alignment at D-dudresnayi_contig9893:5365..10746+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGCAGGCAAGGCAGATGGACGCGTTCTTCTTCCTCTCGATATGGCAGG
CAAGGCAGATGGACGCGTTCTTCTTCCTCTCGATGTTGAACCTGTGGAGT
ATCGCATCAAGCTCACGCCGGACATGGAGAGGTTCACATGCCTGGGAGAA
CAAGAGGTCGACCTAGACGTTGAACCTGTGGAGTATCGCATCAAGCTCAC
GCCGGACATGGAGAGGTTCACATGCCTGGGAGAACAAGAGGTCGACCTAG
ACATCCTCGAGGAGACTAGCACTGTGTCTCTCCACAGCAAGGAGATCTAC
ATCATGGAGGCGTCTTTCATCCCCACGGGGAAAGGGGGCCCCGGAAAGGC
GACGGGCGCGGTTAGCATCTCGTTCGACCTCAAGCTCACAACGGCGACTT
TCACGTTCCCCGAGCCCCTCGCCAAGGGCAAGGGCGTCCTCAAGCTCTCC
TTCCAGTGCGCCATCAACAACCAGATCCTCGAGGAGACTAGCACTGTGTC
TCTCCACAGCAAGGAGATCTACATCATGGAGGCGTCTTTCATCCCCACGG
GGAAAGGGGGCCCCGGAAAGGCGACGGGCGCGGTTAGCATCTCGTTCGAC
CTCAAGCTCACAACGGCGACTTTCACGTTCCCCGAGCCCCTCGCCAAGGG
CAAGGGCGTCCTCAAGCTCTCCTTCCAGTGCGCCATCAACAACCAGATGG
CTGGGTTCTATCGGTCAGGGTACACGACCGTGGAGGGGGAGTCCAGGGTG
ATGGCTTCGACACAGTTCGAGGCGCTGGACGCGCGGCGATGTTTTCCCTG
TTGGGACGAGCCTGCCCGCAAGGCTGTATTCCAGGTACAGTTGATGGCTG
GGTTCTATCGGTCAGGGTACACGACCGTGGAGGGGGAGTCCAGGGTGATG
GCTTCGACACAGTTCGAGGCGCTGGACGCGCGGCGATGTTTTCCCTGTTG
GGACGAGCCTGCCCGCAAGGCTGTATTCCAGGTACAGTTG
back to top