mRNA_D-dudresnayi_contig9887.28701.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig9887.28701.1 vs. uniprot
Match: A0A835ZAF2_9STRA (UmuC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAF2_9STRA) HSP 1 Score: 120 bits (300), Expect = 7.300e-32 Identity = 53/90 (58.89%), Postives = 71/90 (78.89%), Query Frame = 1 Query: 259 PDLRQDHSRCVLHFDIDCFYAQVQEVLDPSLRGKPVGIKQKYLLVTCNYTARRLGVRKMESLMEAKRRCPSLIVRDGEDLTRYREASEAI 528 P + H R ++H DID FYAQV+ +LDPSLRG+PVG++QKYL+VTCNY AR GV+KM+++ A + CP LIV++GE LT+YREASE + Sbjct: 5 PSREESHRRAIIHIDIDSFYAQVEVLLDPSLRGRPVGVQQKYLMVTCNYVARAAGVKKMQAVTGALQACPELIVKNGETLTKYREASERV 94
BLAST of mRNA_D-dudresnayi_contig9887.28701.1 vs. uniprot
Match: A0A7R9VA81_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VA81_9CHLO) HSP 1 Score: 113 bits (283), Expect = 1.810e-28 Identity = 51/94 (54.26%), Postives = 67/94 (71.28%), Query Frame = 1 Query: 247 AEPPPDLRQDHSRCVLHFDIDCFYAQVQEVLDPSLRGKPVGIKQKYLLVTCNYTARRLGVRKMESLMEAKRRCPSLIVRDGEDLTRYREASEAI 528 A P R DH R + HFD+DCFYAQ +EV DPSL+G P+G+ QKYL+VTCNY AR GV K+ + +AK +CP++++ GEDLT YR A+ I Sbjct: 42 AMPHDTARFDHGRVISHFDVDCFYAQAEEVRDPSLQGVPLGVTQKYLIVTCNYAARASGVTKLMGIQQAKAKCPNIVLVSGEDLTPYRSAAGQI 135
BLAST of mRNA_D-dudresnayi_contig9887.28701.1 vs. uniprot
Match: A0A7S2SWA7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A7S2SWA7_9CHLO) HSP 1 Score: 113 bits (282), Expect = 5.510e-28 Identity = 54/89 (60.67%), Postives = 71/89 (79.78%), Query Frame = 1 Query: 259 PDLRQDHSRCVL-HFDIDCFYAQVQEVLDPSLRGKPVGIKQKYLLVTCNYTARRLGVRKMESLMEAKRRCPS-LIVRDGEDLTRYREAS 519 P +QD S+ V+ H D+DCFYAQV+E+LDPSL+GKPVG+ QKYL+VTCNY AR+ G+ K+ ++ EA R+CPS L++R GEDLT YR S Sbjct: 68 PRTKQDVSKAVVVHLDLDCFYAQVEELLDPSLKGKPVGVTQKYLVVTCNYEARKAGITKLMNVKEAMRKCPSSLVLRSGEDLTPYRSYS 156
BLAST of mRNA_D-dudresnayi_contig9887.28701.1 vs. uniprot
Match: A0A8H7NDC9_BIOOC (UmuC domain-containing protein n=1 Tax=Bionectria ochroleuca TaxID=29856 RepID=A0A8H7NDC9_BIOOC) HSP 1 Score: 111 bits (278), Expect = 2.400e-27 Identity = 51/95 (53.68%), Postives = 69/95 (72.63%), Query Frame = 1 Query: 247 AEPPPDLRQDHSRCVLHFDIDCFYAQVQEVLDPSLRGKPVGIKQKYLLVTCNYTARRLGVRKMESLMEAKRRCPSLIVRDGEDLTRYREASEAIF 531 A PP L + R +L FD DCFYAQV EV +P+L+ KP+GIKQK +L TCNY ARR GV+K+ + EAK+ CP L++ +GEDLT +R+ S+ +F Sbjct: 2 ARPPRKLSRKEDRIILQFDYDCFYAQVYEVKNPALKPKPLGIKQKNILATCNYNARRRGVKKLMLITEAKKICPELVIVEGEDLTPFRDVSKILF 96
BLAST of mRNA_D-dudresnayi_contig9887.28701.1 vs. uniprot
Match: A0A8J2WRK3_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2WRK3_9CRUS) HSP 1 Score: 116 bits (290), Expect = 3.910e-27 Identity = 51/85 (60.00%), Postives = 68/85 (80.00%), Query Frame = 1 Query: 277 HSRCVLHFDIDCFYAQVQEVLDPSLRGKPVGIKQKYLLVTCNYTARRLGVRKMESLMEAKRRCPSLIVRDGEDLTRYREASEAIF 531 H R ++H DIDCFYAQV+ +L+PSLRGKP+GIKQK ++VTCNY AR LGV K+ S+ A +CPSL++ +GEDL +YR+ SE I+ Sbjct: 23 HDRVIIHIDIDCFYAQVEMILNPSLRGKPLGIKQKNIVVTCNYEARALGVEKLMSIKTALEKCPSLVLANGEDLKKYRDMSEKIY 107
BLAST of mRNA_D-dudresnayi_contig9887.28701.1 vs. uniprot
Match: A0A7S3CFA6_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CFA6_9CHLO) HSP 1 Score: 116 bits (290), Expect = 4.150e-27 Identity = 54/87 (62.07%), Postives = 68/87 (78.16%), Query Frame = 1 Query: 259 PDLRQDHSRCVLHFDIDCFYAQVQEVLDPSLRGKPVGIKQKYLLVTCNYTARRLGVRKMESLMEAKRRCPSLIVRDGEDLTRYREAS 519 P QD SR +LH D+DCFYAQV+E+LDP L+G+P+ + QKYL VT NY AR LGV K+ S++EAKR+ P L++R GEDLTRYRE S Sbjct: 33 PSCTQDLSRVILHVDLDCFYAQVEELLDPKLKGRPLAVTQKYLCVTSNYEARALGVGKLMSIVEAKRKAPGLVLRCGEDLTRYREFS 119
BLAST of mRNA_D-dudresnayi_contig9887.28701.1 vs. uniprot
Match: A0A0L0D5H6_THETB (UmuC domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D5H6_THETB) HSP 1 Score: 116 bits (291), Expect = 4.270e-27 Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = 1 Query: 283 RCVLHFDIDCFYAQVQEVLDPSLRGKPVGIKQKYLLVTCNYTARRLGVRKMESLMEAKRRCPSLIVRDGEDLTRYREASEAI 528 R V H D+DCFYAQ +E+ DP+L GKPVG+KQKYLLVTCNY AR +GV KM + +A R CP+L V +GEDLTRYREAS AI Sbjct: 35 RLVAHLDVDCFYAQSEEIADPALVGKPVGVKQKYLLVTCNYVARSMGVAKMSKVADALRICPTLHVVNGEDLTRYREASAAI 116
BLAST of mRNA_D-dudresnayi_contig9887.28701.1 vs. uniprot
Match: UPI001560C631 (DNA polymerase iota isoform X1 n=2 Tax=Acipenser ruthenus TaxID=7906 RepID=UPI001560C631) HSP 1 Score: 115 bits (289), Expect = 7.910e-27 Identity = 51/87 (58.62%), Postives = 69/87 (79.31%), Query Frame = 1 Query: 259 PDLRQDHSRCVLHFDIDCFYAQVQEVLDPSLRGKPVGIKQKYLLVTCNYTARRLGVRKMESLMEAKRRCPSLIVRDGEDLTRYREAS 519 P RQ+++R +LHFD+DCFYAQV+ + +P LR KP+G++QKYL+VTCNY AR+ GV K+ S+++AK +CP LI GEDLT YRE S Sbjct: 78 PHRRQNNNRVILHFDLDCFYAQVEMIRNPELRDKPLGVQQKYLVVTCNYVARKHGVNKLMSVIDAKEKCPQLIFVSGEDLTHYREIS 164
BLAST of mRNA_D-dudresnayi_contig9887.28701.1 vs. uniprot
Match: UPI0003318DBD (DNA polymerase iota n=1 Tax=Sorex araneus TaxID=42254 RepID=UPI0003318DBD) HSP 1 Score: 115 bits (289), Expect = 9.210e-27 Identity = 49/80 (61.25%), Postives = 69/80 (86.25%), Query Frame = 1 Query: 280 SRCVLHFDIDCFYAQVQEVLDPSLRGKPVGIKQKYLLVTCNYTARRLGVRKMESLMEAKRRCPSLIVRDGEDLTRYREAS 519 SR ++H D+DCFYAQV+ +L+P L+GKP+G++QKYL+VTCNY AR+LGV+K+ S+ +AK +CP L++ +GEDLTRYRE S Sbjct: 15 SRVIVHVDLDCFYAQVEMILNPELKGKPLGVQQKYLVVTCNYEARKLGVKKVMSVRDAKEKCPQLVLVNGEDLTRYREMS 94
BLAST of mRNA_D-dudresnayi_contig9887.28701.1 vs. uniprot
Match: UPI00189FB36B (DNA polymerase iota isoform X1 n=3 Tax=Choloepus didactylus TaxID=27675 RepID=UPI00189FB36B) HSP 1 Score: 115 bits (288), Expect = 1.290e-26 Identity = 51/96 (53.12%), Postives = 73/96 (76.04%), Query Frame = 1 Query: 253 PPPDLRQD-------HSRCVLHFDIDCFYAQVQEVLDPSLRGKPVGIKQKYLLVTCNYTARRLGVRKMESLMEAKRRCPSLIVRDGEDLTRYREAS 519 PPP + + SR ++H D+DCFYAQV+ + +P LRGKP+G++QKYL+VTCNY AR+LGV+K+ ++ +AK +CP L++ +GEDLTRYRE S Sbjct: 44 PPPSVHEQVVPTGSSSSRVIVHVDLDCFYAQVEMISNPELRGKPLGVQQKYLVVTCNYEARKLGVKKLMNVRDAKEKCPQLVLVNGEDLTRYREMS 139 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9887.28701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9887.28701.1 >prot_D-dudresnayi_contig9887.28701.1 ID=prot_D-dudresnayi_contig9887.28701.1|Name=mRNA_D-dudresnayi_contig9887.28701.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=148bp MMDHGDEEELEEEEEEEGGEQHMQDTDVDGVSNSSSHSTTGAGGDFLPDEback to top mRNA from alignment at D-dudresnayi_contig9887:1157..4530- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig9887.28701.1 ID=mRNA_D-dudresnayi_contig9887.28701.1|Name=mRNA_D-dudresnayi_contig9887.28701.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=3374bp|location=Sequence derived from alignment at D-dudresnayi_contig9887:1157..4530- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig9887:1157..4530- >mRNA_D-dudresnayi_contig9887.28701.1 ID=mRNA_D-dudresnayi_contig9887.28701.1|Name=mRNA_D-dudresnayi_contig9887.28701.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=888bp|location=Sequence derived from alignment at D-dudresnayi_contig9887:1157..4530- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |