mRNA_D-dudresnayi_contig9855.28663.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig9855.28663.1 vs. uniprot
Match: A0A6H5L3F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3F4_9PHAE) HSP 1 Score: 110 bits (276), Expect = 3.340e-24 Identity = 78/217 (35.94%), Postives = 108/217 (49.77%), Query Frame = 1 Query: 7 IKTIEERQEFHKVSAI---FAIEKSRCRHGFPRAYVVY---YIAQSCMIRLSCPHLTKAIDRFEYKENGIVRINAGLNETDNQDNFQPLAPPHHPPAQPVVEENLVPTAVAMRDHFRTINAHWKELKGELVSPEQYDILQARLGAIGAEHFLNSGLGGISPKKVGDVKCLHTHVADTILRGKSANRFGRWALKKIEEEQGVDPSGCD-----CTYYI 624 ++ IEERQ HK A + + CRHGFP+A+ + S + RLSCP L +AID E E GI +NA L EE L R+ F +N L+ LV+PE+ +++ +G GAE FL+SG+ G++ KV D KCLH HVAD ++RG+SAN GR L+ +E +GV G D C Y + Sbjct: 138 LRCIEERQLRHKAGASSRSMGVSPNPCRHGFPQAFAFDPCGHKVSSGLFRLSCPLLVQAIDLLE-DEGGIEDVNARL----------------------ASEEGL-------REDFMAVNLAHGMLRRRLVTPEKLGMVEETIGKEGAERFLDSGITGVTTGKVRDAKCLHAHVADALMRGRSANAIGRATLELLEA-RGVRTDGGDRCSEQCNYRV 323
BLAST of mRNA_D-dudresnayi_contig9855.28663.1 vs. uniprot
Match: D8LLL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLL9_ECTSI) HSP 1 Score: 103 bits (258), Expect = 1.130e-22 Identity = 69/196 (35.20%), Postives = 98/196 (50.00%), Query Frame = 1 Query: 61 IEKSRCRHGFPRAYVVY---YIAQSCMIRLSCPHLTKAIDRFEYKENGIVRINAGLNETDNQDNFQPLAPPHHPPAQPVVEENLVPTAVAMRDHFRTINAHWKELKGELVSPEQYDILQARLGAIGAEHFLNSGLGGISPKKVGDVKCLHTHVADTILRGKSANRFGRWALKKIEEEQGVDPSGCD-----CTYYI 624 + + CRHGFP+A+ + S + RLSCP L +AID E E GI +NA L EE L R+ F +N L+ LV+P++ +++ +G GA FL+SG+ G++P KV D KCLH HVAD ++RG+SAN GR L+ +E +GV G D C Y + Sbjct: 3 VSPNPCRHGFPQAFAFDPCGHKVSSGLFRLSCPLLVQAIDLLE-DEGGIEDVNARL----------------------ASEEGL-------REDFMAVNLAHGMLRRRLVTPDKMGLVEETIGKEGAGRFLDSGITGVTPGKVRDAKCLHAHVADALMRGRSANAIGRATLELLEA-RGVRTDGGDRCSEQCNYLV 167
BLAST of mRNA_D-dudresnayi_contig9855.28663.1 vs. uniprot
Match: A0A7S2SII3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SII3_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 7.110e-16 Identity = 70/206 (33.98%), Postives = 101/206 (49.03%), Query Frame = 1 Query: 16 IEERQEFHKVSAIFAIEK-SRCRHGFPRAYVVYYIAQ----SCMIRLSCPHLTKAIDRFEYKENGIVRINAGLNETDNQDNFQPLAPPHHPPAQPVVEENLVPTAVAMRDHFRTINAHWKELKGELVSPEQYDILQARLGAIGAEHFLNSGLGGISPKKVGDVKCLHTHVADTILRGKSANRFGRWALKKIEEEQGVDPSGC-DCT 615 +EERQ H S + RCRHGFP+A + + + S +IRL+CPHL KAID +E E + N L NQ + +E+L RT + H +EL+ LV P + L R GA A+ FL++GL G+SP K DVKCLH + D + + N G+ ++ + + +GV GC DC+ Sbjct: 83 VEERQLRHSASQAVGVPVVCRCRHGFPQAVLFEPMGKNKPVSGLIRLTCPHLVKAIDEYE-AEGAVKEFNKRLQG--NQ----------------LWKESLQ----------RTNDVH-RELRRGLVGPSDHAALAERFGAAQAQAFLDAGLAGMSPTKNNDVKCLHAQLGDWMFHDQ--NVIGKAVVQDLAD-RGVPIDGCEDCS 255
BLAST of mRNA_D-dudresnayi_contig9855.28663.1 vs. uniprot
Match: A0A8J2S7V2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S7V2_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 4.180e-15 Identity = 62/201 (30.85%), Postives = 94/201 (46.77%), Query Frame = 1 Query: 16 IEERQEFHKVSAIFAIEKSRCRHGFPRAYVVYYIAQSC---MIRLSCPHLTKAIDRFEYKENGIVRINAGLNETDNQDNFQPLAPPHHPPAQPVVEENLVPTAVAMRDHFRTINAHWKELKGELVSPEQYDILQARLGAIGAEHFLNSGLGGISPKKVGDVKCLHTHVADTILRGKSANRFGRWALKKIEEEQGVDPSGCD 609 +E+RQ H + + S CRHG+P+A + A M+RL+CPHL +A+D +E E + ++A L D A RD R +N + +V E +ARLGA L+SG+ G++P K+ DVKCLH +AD +L N G+ L+ +E +GVDP+G + Sbjct: 42 VEQRQLGHPANMVGVPAVSLCRHGYPQAVLQDPGAHKFGAGMLRLTCPHLCEAVDAWE-AEGAVRALSAELLAED-----------------------------ANRDALRKVNERHAVTRKSMVQGEALARAEARLGADTVRRVLDSGITGLTPSKLDDVKCLHAQLADELLS--RDNAVGKKVLEGLEA-RGVDPTGSE 209
BLAST of mRNA_D-dudresnayi_contig9855.28663.1 vs. uniprot
Match: A0A7S1UER6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UER6_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 2.420e-11 Identity = 68/218 (31.19%), Postives = 97/218 (44.50%), Query Frame = 1 Query: 10 KTIEERQEFHKVSAIFAIEKSRCRHGFPRAYVVY----YIAQSCMIRLSCPHLTKAIDRFEYKENGIVRINAGLNETDNQDNFQPLAPPHHPPAQPVVEENLVPTAVAMRDHFRTINAHWKELKGELVSP-------EQYDILQARLGAIGAEHF----LNSGLGGISPKKVGDVKCLHTHVADTILRGKSANRFGRWALKKIEEEQGVDPSGCDCTY 618 +++EERQ H + I A+ + C+HGFP+A+ S +RL+CP L KAID +E E+G+ + NA L EN TA AMR N + L+ L + E+Y +E F + SG G+S + DVKCLH H AD +LRG AN G L+++ VDP+G + Y Sbjct: 54 RSLEERQLRHPGN-IAAVPCTSCKHGFPQAFFSDPREGRRLHSATLRLTCPWLVKAIDEYE-AEDGVRKFNADL-----------------------TGENE--TAEAMRASLEDANTFHRNLRQRLFATPGGAARLEEYRAAAHEKDPENSEKFVAAVMGSGFIGVSKRNNLDVKCLHAHAADHLLRG-GANAVGAEVLRRLP----VDPTGGERCY 239
BLAST of mRNA_D-dudresnayi_contig9855.28663.1 vs. uniprot
Match: A0A7S2SIM8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SIM8_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 8.390e-11 Identity = 56/165 (33.94%), Postives = 81/165 (49.09%), Query Frame = 1 Query: 124 SCMIRLSCPHLTKAIDRFEYKENGIVRINAGLNETDNQDNFQPLAPPHHPPAQPVVEENLVPTAVAMRDHFRTINAHWKELKGELVSPEQYDILQARLGAIGAEHFLNSGLGGISPKKVGDVKCLHTHVADTILRGKSANRFGRWALKKIEEEQGVDPSGC-DCT 615 S +IRL+CPHL KAID +E E + N L NQ + +E+L RT + H +EL+ LV P + L R GA A+ FL++GL G+SP K DVKCLH + D + + N G+ ++ + + +GV GC DC+ Sbjct: 6 SGLIRLTCPHLVKAIDEYE-AEGAVKEFNKRLQG--NQ----------------LWKESLQ----------RTNDVH-RELRRGLVGPSDHAALAERFGAAQAQAFLDAGLAGMSPTKNNDVKCLHAQLGDWMFHDQ--NVIGKAVVQDLAD-RGVPIDGCEDCS 137
BLAST of mRNA_D-dudresnayi_contig9855.28663.1 vs. uniprot
Match: A0A7S2ASG1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ASG1_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 5.780e-10 Identity = 33/78 (42.31%), Postives = 48/78 (61.54%), Query Frame = 1 Query: 346 NAHWKELKGELVSPEQYDILQARLGAIGAEHFLNSGLGGISPKKVGDVKCLHTHVADTILRGKSANRFGRWALKKIEE 579 N + L+ +S + + LQ R G+ GA+ F+NSG+ G+SP K+ DVKCLH H+AD +LRG S N+ G + E Sbjct: 1 NDEHRRLRRWHMSEGEVEALQVRFGSEGAQAFMNSGIAGMSPSKLDDVKCLHAHLADYLLRG-STNKIGNHVATALSE 77
BLAST of mRNA_D-dudresnayi_contig9855.28663.1 vs. uniprot
Match: A4SB46_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4SB46_OSTLU) HSP 1 Score: 65.9 bits (159), Expect = 5.080e-9 Identity = 63/208 (30.29%), Postives = 88/208 (42.31%), Query Frame = 1 Query: 37 HKVSAIFAIEKSRCRHGFPRAYV------------VYYIAQSCMIRLSCPHLTKAIDRFEYKENGIVRINAGLNETDNQDNFQPLAPPHHPPAQPVVEENLVPTAVAMRDHFRTINAHWKELKGELVSPEQYDILQARLGAIGAEHFLN-SGLGGIS------PKKVGDVKCLHTHVADTILRGKSANRFGRWALKKIEEEQGVDPSG 603 H + E RCRHG+ RA + A+ + RLSCP L +A+D +E +E GI + A + ++ FQ L H RD R N W L GE S + R G + +N +GL G+S K VKCLH H+ADT++RG+ N G +AL + +GVD G Sbjct: 59 HACAQAIGGEARRCRHGYSRALLYAPASTTTTDARAALKAEHALSRLSCPELIEAVDAWE-REGGIHAVAAACDADESL--FQSLERAH-------------------RDAPRVRN--W--LVGEETSA------RVREGETKTDFIVNRTGLVGVSLEALTSQKTWKKVKCLHAHIADTLVRGRGKNAVGAFALDVLRTRRGVDVDG 234 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9855.28663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9855.28663.1 >prot_D-dudresnayi_contig9855.28663.1 ID=prot_D-dudresnayi_contig9855.28663.1|Name=mRNA_D-dudresnayi_contig9855.28663.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=201bp MIRLSCPHLTKAIDRFEYKENGIVRINAGLNETDNQDNFQPLAPPHHPPAback to top mRNA from alignment at D-dudresnayi_contig9855:10188..11300- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig9855.28663.1 ID=mRNA_D-dudresnayi_contig9855.28663.1|Name=mRNA_D-dudresnayi_contig9855.28663.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1113bp|location=Sequence derived from alignment at D-dudresnayi_contig9855:10188..11300- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig9855:10188..11300- >mRNA_D-dudresnayi_contig9855.28663.1 ID=mRNA_D-dudresnayi_contig9855.28663.1|Name=mRNA_D-dudresnayi_contig9855.28663.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1206bp|location=Sequence derived from alignment at D-dudresnayi_contig9855:10188..11300- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |