mRNA_D-dudresnayi_contig9830.28640.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9830.28640.1
Unique NamemRNA_D-dudresnayi_contig9830.28640.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig9830.28640.1 vs. uniprot
Match: A0A7S0SUU4_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUU4_9STRA)

HSP 1 Score: 448 bits (1153), Expect = 1.090e-155
Identity = 201/286 (70.28%), Postives = 257/286 (89.86%), Query Frame = 2
Query:   89 EDTKKLLTNTYKQHTKNIAIWGGFLTCSLLVYYFLSSGDFSFLLTYASFMRCFGFGVLNYRMWTTKSAKGVSVKTLELYGLTFVVRLLSILRHQGYLPFDKTGDWFYHIVEIMSFASVGLALYGLFGPLISTYDEKHDRFGNLHIPSEFGIAYLVVPCVILAVIFHPALNREFFSDTCWTLSMYLEAVAMLPQIYMFQRQASDEGGTVEALIGHTVFALGFARVFELIFWVGSFKELSDWSGSRIPGYIVLLSQLGHLLVMADFFYYYFMSLSKGLPMELPTTYSG 946
            ++TKK L  T++++T+NI IW GF + SLLVY+FLSSGDFSFLLTY++FM+CF FG+LNY+++TT + KG+S+KTL+L+ +TF+VRLLSI RHQGYLPFDKTGDWFYH+VE++SF  + L+LY ++ P+ISTYDEK+DRFG+L+IP+EFGI YL VPC+ILA++FHP+LNRE+ SDTCW LSMYLEAVAM+PQIYMFQ+QASD+GG VEALIGHTVFALGF+RVFEL+FW+ SF+EL+D +GSR+PGYIVL+SQLG +++M DFFYYYF S+SKGLPM+LPTT  G
Sbjct:    7 DETKKYLGKTFRKNTQNIIIWAGFFSVSLLVYFFLSSGDFSFLLTYSAFMKCFAFGLLNYKIFTTMTVKGISLKTLQLFLITFLVRLLSIFRHQGYLPFDKTGDWFYHVVEVISFLCISLSLYAIYIPMISTYDEKYDRFGSLYIPNEFGIVYLAVPCIILAILFHPSLNREWLSDTCWCLSMYLEAVAMIPQIYMFQKQASDQGGFVEALIGHTVFALGFSRVFELVFWLASFRELADLNGSRLPGYIVLISQLGQVVIMGDFFYYYFKSISKGLPMQLPTTSYG 292          
BLAST of mRNA_D-dudresnayi_contig9830.28640.1 vs. uniprot
Match: A0A812YBP6_SYMMI (KdelR protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YBP6_SYMMI)

HSP 1 Score: 356 bits (913), Expect = 4.200e-120
Identity = 163/239 (68.20%), Postives = 200/239 (83.68%), Query Frame = 2
Query:  236 MRCFGFGVLNYRMWTTKSAKGVSVKTLELYGLTFVVRLLSILRHQGYLPFDKTGDWFYHIVEIMSFASVGLALYGLFGPLISTYDEKHDRFGNLHIPSEFGIAYLVVPCVILAVIFHPALNREFFSDTCWTLSMYLEAVAMLPQIYMFQRQASDEGGTVEALIGHTVFALGFARVFELIFWVGSFKELSDWSGSRIPGYIVLLSQLGHLLVMADFFYYYFMSLSKGLPMELPTTYSGVV 952
            MRCFGF +LN++M   KS++GVSVKTLELY + F+ R+LSI RHQGYLPFDKTGDWFYH VEI+SF +V  A+Y LFGPL STY+ K+D+FGNL++P   G+ YL+ PCV+LA++FHP+LN E FSD CWTLSMYLE+VAM PQ+YMFQ+QA+DEG  VE+L  H VFALGF+RVFELIFWV SF EL  +SGSRI GY+VL++Q+ H+ +M DFFYYYF S+S+G PMELPTTYSGVV
Sbjct:    1 MRCFGFALLNFKMINGKSSRGVSVKTLELYAIVFLCRVLSITRHQGYLPFDKTGDWFYHFVEIISFLAVCCAIYILFGPLRSTYERKYDKFGNLNVPDYLGVVYLLGPCVLLAIVFHPSLNNELFSDICWTLSMYLESVAMPPQLYMFQKQANDEGSIVESLTSHMVFALGFSRVFELIFWVTSFTELQHYSGSRIAGYLVLIAQICHVGIMGDFFYYYFRSVSQGTPMELPTTYSGVV 239          
BLAST of mRNA_D-dudresnayi_contig9830.28640.1 vs. uniprot
Match: A0A7S2GHT0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GHT0_9STRA)

HSP 1 Score: 320 bits (820), Expect = 2.880e-105
Identity = 156/272 (57.35%), Postives = 198/272 (72.79%), Query Frame = 2
Query:  140 IAIWGGFLTCSLLVYYFLSSGDFSFLLTYASFMRCFGFGVLNYRMWTTKSAKGVSVKTLELYGLTFVVRLLSILRHQGYLPFDKTGDWFYHIVEIMSFASVGLALYGLFGPLISTYDEKHDRFGNLHIPSEFGIAYLVVPCVILAVIFHPALNREFFSDTCWTLSMYLEAVAMLPQIYMFQRQASDEG-GTVEALIGHTVFALGFARVFELIFWVGSFKELSDWSGSRIPGYIVLLSQLGHLLVMADFFYYYFMSLSKGLPMELPTTYSGVV 952
            +  W  F   SLL+Y  LS GDFSFLLTYAS  RCF F +LN +M+T+ SA  VS+KTLE Y + F  RL+SI+RH+GYLP+D +GDWFYH+VE  S  S  +A+Y LF     TYD+  D FGNL IPS  G+ Y+V+PC+ILAVIFHP LN++F SD  WT SMYLE++A+LPQ+YMFQ+QAS  G G +E L+ H+VFALGFARV E  FW+ SF EL   +GS+  G++VLLSQ  H+ +M DFFY+YF+SL  G  M+LPT  SG+V
Sbjct:   18 VVSWIAFFFVSLLIYKMLSDGDFSFLLTYASVCRCFAFIILNIKMFTSNSASSVSLKTLEAYIVVFFWRLVSIMRHEGYLPYDSSGDWFYHVVEFTSLVSACVAVYQLFYKYRGTYDDSKDAFGNLGIPSFLGVLYIVLPCLILAVIFHPNLNKDFISDASWTFSMYLESLAILPQLYMFQKQASGTGSGVIEVLVSHSVFALGFARVVESAFWMSSFHELHSGAGSQFVGWVVLLSQFIHVALMGDFFYFYFLSLQSGTAMQLPTQ-SGLV 288          
BLAST of mRNA_D-dudresnayi_contig9830.28640.1 vs. uniprot
Match: A0A7R9U936_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U936_9STRA)

HSP 1 Score: 313 bits (803), Expect = 1.010e-102
Identity = 151/273 (55.31%), Postives = 193/273 (70.70%), Query Frame = 2
Query:  128 HTKNIAIWGGFLTCSLLVYYFLSSGDFSFLLTYASFMRCFGFGVLNYRMWTTKSAKGVSVKTLELYGLTFVVRLLSILRHQGYLPFDKTGDWFYHIVEIMSFASVGLALYGLFGPLISTYDEKHDRFGNLHIPSEFGIAYLVVPCVILAVIFHPALNREFFSDTCWTLSMYLEAVAMLPQIYMFQRQASDEGGTVEALIGHTVFALGFARVFELIFWVGSFKELSDWSGSRIPGYIVLLSQLGHLLVMADFFYYYFMSLSKGLPMELPTTYSG 946
            H  NIAIWGGFL  S LVY  +S+GDFSFLLTY + MR F F +L  RM  +KS +G+SVK+LE Y + FV RLLSI+RH+GYLP+DK+GDWFYH+VEI S   V L+LY       +TYD + D FGNLH+P   G+ +L+ P ++LA++ HP LN EFFSD CWT +MYLE++A+ PQ+Y FQRQA+ +   VE L  H V ALG AR+ E+IFW  SF+ELS  S S   G  VL++Q+ H+L+M DFFYYYF +L  G PM LP   +G
Sbjct:   10 HKLNIAIWGGFLIFSFLVYMLVSNGDFSFLLTYGALMRTFSFFLLIVRMVMSKSCRGISVKSLEAYAVVFVFRLLSIVRHEGYLPWDKSGDWFYHVVEISSMGLVSLSLYLTLVRFRNTYDAQTDTFGNLHVPDHLGVVWLLGPPLVLALLLHPNLNSEFFSDVCWTFAMYLESIAIFPQLYQFQRQAAQKNFEVEILHAHFVSALGLARIIEMIFWSSSFRELSHSSNSTWVGIFVLVAQIVHILIMLDFFYYYFNALKSGTPMRLPQHTAG 282          
BLAST of mRNA_D-dudresnayi_contig9830.28640.1 vs. uniprot
Match: A0A6V2QBA8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2QBA8_HETAK)

HSP 1 Score: 313 bits (802), Expect = 1.430e-102
Identity = 142/266 (53.38%), Postives = 195/266 (73.31%), Query Frame = 2
Query:  140 IAIWGGFLTCSLLVYYFLSSGDFSFLLTYASFMRCFGFGVLNYRMWTTKSAKGVSVKTLELYGLTFVVRLLSILRHQGYLPFDKTGDWFYHIVEIMSFASVGLALYGLFGPLISTYDEKHDRFGNLHIPSEFGIAYLVVPCVILAVIFHPALNREFFSDTCWTLSMYLEAVAMLPQIYMFQRQASDEGGTVEALIGHTVFALGFARVFELIFWVGSFKELSDWSGSRIPGYIVLLSQLGHLLVMADFFYYYFMSLSKGLPMELPTT 937
            +  WG FLT SLL +Y  S GDFSF++TYAS  R F F VL ++M  TKS++GVS+KTLELY L ++ RL +I RH+GYLPFD++GDWFYH+VE ++   VGL+ + + GP  + Y++  D FGNLH+P E+G  YL+VPC +LA++FHP+LN E+FSD CWT SMYLE VA++PQ+YMFQ+Q S     VE LI H+VFALGFARV +L+FW+ ++ EL+    +   G ++L +Q  ++ +M DFFYYYF+S+  G  M+LP T
Sbjct:   18 VLAWGSFLTISLLCFYLFSDGDFSFVMTYASMTRFFAFAVLAFKMIWTKSSQGVSLKTLELYFLMYLFRLAAIARHEGYLPFDRSGDWFYHMVEFLALVLVGLSGFLIMGPFAARYEKTFDCFGNLHVPPEYGAVYLIVPCFLLALVFHPSLNNEWFSDCCWTFSMYLETVAIMPQLYMFQKQVSR---VVEVLISHSVFALGFARVLDLVFWLSTYSELAGKGSTNFSGMLILFTQFINVALMGDFFYYYFLSIKSGTGMQLPMT 280          
BLAST of mRNA_D-dudresnayi_contig9830.28640.1 vs. uniprot
Match: A0A7S2SS64_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS64_9STRA)

HSP 1 Score: 309 bits (792), Expect = 7.680e-101
Identity = 147/271 (54.24%), Postives = 195/271 (71.96%), Query Frame = 2
Query:  140 IAIWGGFLTCSLLVYYFLSSGDFSFLLTYASFMRCFGFGVLNYRMWTTKSAKGVSVKTLELYGLTFVVRLLSILRHQGYLPFDKTGDWFYHIVEIMSFASVGLALYGLFGPLISTYDEKHDRFGNLHIPSEFGIAYLVVPCVILAVIFHPALNREFFSDTCWTLSMYLEAVAMLPQIYMFQRQASDEGGTVEALIGHTVFALGFARVFELIFWVGSFKELSDWSGSRIPGYIVLLSQLGHLLVMADFFYYYFMSLSKGLPMELPTTYSGVV 952
            +  W  F + S +VYY LS GDFSF+LTY++  RCF F +LN+RM T+ SA  VS+KTLE Y + FV RL S+LRH+GYLP+D++GDWFYH+VE  S A V  A++ L+    +TYDE  D FG+LHIP ++G+ Y++VP +ILA+   P LN++FFSD  WT SMYLE+VA+LPQ+YMF +QA+     VE L+ H VFALGFARV E+ FW+ SF EL+  +  R+ GY+VLLSQ  H+  M DFFYYYF S+  G PM +  T+SG+V
Sbjct:   34 VLAWVAFFSFSFIVYYALSDGDFSFILTYSALWRCFAFFLLNFRMLTSNSASSVSLKTLEAYVVVFVFRLASLLRHEGYLPYDRSGDWFYHLVETTSLALVCGAIFLLYFRFRATYDEAKDAFGSLHIPPQYGVVYIIVPAMILAIFLRPNLNKDFFSDAAWTFSMYLESVAILPQLYMFTKQANTP---VEVLVSHCVFALGFARVMEMAFWLWSFHELTGHATGRLVGYVVLLSQFFHVAFMGDFFYYYFQSIRWGTPMNVLPTHSGMV 301          
BLAST of mRNA_D-dudresnayi_contig9830.28640.1 vs. uniprot
Match: A0A7S0AL10_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AL10_9STRA)

HSP 1 Score: 308 bits (790), Expect = 1.660e-99
Identity = 142/272 (52.21%), Postives = 190/272 (69.85%), Query Frame = 2
Query:  134 KNIAIWGGFLTCSLLVYYFLSSGDFSFLLTYASFMRCFGFGVLNYRMWTTKSAKGVSVKTLELYGLTFVVRLLSILRHQGYLPFDKTGDWFYHIVEIMSFASVGLALYGLFGPLISTYDEKHDRFGNLHIPSEFGIAYLVVPCVILAVIFHPALNREFFSDTCWTLSMYLEAVAMLPQIYMFQRQASDEGGTVEALIGHTVFALGFARVFELIFWVGSFKELSDWSGSRIPGYIVLLSQLGHLLVMADFFYYYFMSLSKGLPMELPTTYSGV 949
            KN+ IW GF T SL VY+ LS GDFSFL+TY +  R FGFG+LN + + +K A GVS+KTL+LY L F  RL SI+RH+GYLP+DK+GDW YH++EI++      A +G  GP   TY    DRFG +++PS +G  YL VP +ILA++ HP LN +F SD  WT +MYLE+VA++PQ+YMFQ+Q S   G VE L  H V ALGF R+ E  FWV S+ EL+  +GS++PGY+ L SQ   L++M DFF+YY+M++    P+ LPT  SG+
Sbjct:  103 KNVMIWAGFFTASLFVYFVLSGGDFSFLMTYGAMSRMFGFGILNIKTFMSKRATGVSIKTLQLYCLVFFFRLTSIIRHEGYLPYDKSGDWLYHVIEILALIFTASACWGCMGPFKQTYQPDQDRFGEMNVPSGYGAVYLAVPIMILAILVHPNLNSDFLSDVAWTYAMYLESVALIPQLYMFQKQTS---GVVELLTAHFVAALGFGRLLEFAFWVYSYHELATAAGSKLPGYLALFSQFMQLVLMLDFFWYYYMAVKNATPLVLPTQGSGM 371          
BLAST of mRNA_D-dudresnayi_contig9830.28640.1 vs. uniprot
Match: A0A7S2H0H3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H0H3_9STRA)

HSP 1 Score: 305 bits (782), Expect = 2.080e-98
Identity = 139/272 (51.10%), Postives = 192/272 (70.59%), Query Frame = 2
Query:  134 KNIAIWGGFLTCSLLVYYFLSSGDFSFLLTYASFMRCFGFGVLNYRMWTTKSAKGVSVKTLELYGLTFVVRLLSILRHQGYLPFDKTGDWFYHIVEIMSFASVGLALYGLFGPLISTYDEKHDRFGNLHIPSEFGIAYLVVPCVILAVIFHPALNREFFSDTCWTLSMYLEAVAMLPQIYMFQRQASDEGGTVEALIGHTVFALGFARVFELIFWVGSFKELSDWSGSRIPGYIVLLSQLGHLLVMADFFYYYFMSLSKGLPMELPTTYSGV 949
            +N+ +W GF + SL VY+ LS GDFSFL+TY +  R FGFG+LN + +T+K A GVS+KTL+LY + F  RL SI+RH+GYLP+DK+GDW YH++EIM+      ALYG   P  STY    D+FG +++PS  G  YL VP +++A+  HP LN +F SD  WT +MYLE+VA++PQ+YMFQ+QA+   G VE L  H V ALGF RV E  FW+ S+ EL+  +GS++PGY+ +LSQ   L++M DFFYYY++++    PM LP+  SG+
Sbjct:   95 QNVIMWAGFFSVSLFVYFVLSGGDFSFLMTYGAMARMFGFGILNVKTFTSKRATGVSIKTLQLYSMVFFFRLTSIIRHEGYLPYDKSGDWLYHVIEIMALIFTSSALYGCMFPFKSTYQADADKFGEINVPSGLGAVYLAVPVLLVALFIHPNLNSDFLSDVAWTYAMYLESVALVPQLYMFQKQAT---GVVELLTAHFVAALGFGRVLEFAFWIYSYHELASSNGSKLPGYLAILSQFVQLVLMLDFFYYYYVAVKNATPMVLPSHTSGM 363          
BLAST of mRNA_D-dudresnayi_contig9830.28640.1 vs. uniprot
Match: A0A7S3PUD9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PUD9_9STRA)

HSP 1 Score: 302 bits (774), Expect = 4.740e-97
Identity = 136/267 (50.94%), Postives = 188/267 (70.41%), Query Frame = 2
Query:  134 KNIAIWGGFLTCSLLVYYFLSSGDFSFLLTYASFMRCFGFGVLNYRMWTTKSAKGVSVKTLELYGLTFVVRLLSILRHQGYLPFDKTGDWFYHIVEIMSFASVGLALYGLFGPLISTYDEKHDRFGNLHIPSEFGIAYLVVPCVILAVIFHPALNREFFSDTCWTLSMYLEAVAMLPQIYMFQRQASDEGGTVEALIGHTVFALGFARVFELIFWVGSFKELSDWSGSRIPGYIVLLSQLGHLLVMADFFYYYFMSLSKGLPMELPT 934
            KN+ IW GF T SL VY  LS GDFSFL+TY +  R FGFG+LN + + ++ A GVS KTL+LY + F+ RL SI+RH+GYLP+DK+GDW YH +EIM+F     AL+G+ GP  STY    D+FG  ++P  +GI YL VP  ++AV+ HP+LN ++ SD  WT +MYLE+V+++PQ+YMFQ+Q +   G VE L  H V ALGF RV E IFW+ S++EL+  SGS +PGY+ ++SQ   L++M DFF+YY  ++    P+ LP+
Sbjct:  107 KNVLIWAGFFTASLFVYSVLSGGDFSFLMTYGAMARMFGFGILNVKTFKSQRATGVSAKTLQLYSIVFIFRLTSIIRHEGYLPYDKSGDWLYHFIEIMAFVFSATALWGVMGPFKSTYQADCDKFGEFNVPPGYGIVYLAVPIFLIAVLLHPSLNSDWLSDVAWTYAMYLESVSVIPQLYMFQKQTN---GVVELLTAHFVAALGFGRVMEFIFWIYSYRELATTSGSTLPGYLAIISQFAQLVLMVDFFWYYITAVKNATPLVLPS 370          
BLAST of mRNA_D-dudresnayi_contig9830.28640.1 vs. uniprot
Match: A0A7S0UKE6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UKE6_9STRA)

HSP 1 Score: 301 bits (772), Expect = 6.920e-97
Identity = 142/266 (53.38%), Postives = 184/266 (69.17%), Query Frame = 2
Query:  137 NIAIWGGFLTCSLLVYYFLSSGDFSFLLTYASFMRCFGFGVLNYRMWTTKSAKGVSVKTLELYGLTFVVRLLSILRHQGYLPFDKTGDWFYHIVEIMSFASVGLALYGLFGPLISTYDEKHDRFGNLHIPSEFGIAYLVVPCVILAVIFHPALNREFFSDTCWTLSMYLEAVAMLPQIYMFQRQASDEGGTVEALIGHTVFALGFARVFELIFWVGSFKELSDWSGSRIPGYIVLLSQLGHLLVMADFFYYYFMSLSKGLPMELPT 934
            N+ +W GFLT SL VY+FLS GDFSFL+TY    R FGFG+LN + + ++ A GVS KTL+LY + F  RL SI+RH+GYLP+DK+GDW YH +E MS     LALY    P   TY    D+FG   +P  FG  YL  P ++LA+I HP LN +F SDT WT +MYLE+ A+ PQ+YMF RQ+S   G VE L  H VFALGF R+ EL+FWV S+ EL+D SGSR+PGY+ + SQ+  L++M DFF+YYFM++    P+ LP+
Sbjct:   98 NVLLWFGFLTVSLFVYFFLSGGDFSFLMTYGGMARMFGFGILNLKTFKSQRATGVSTKTLQLYCIVFFFRLTSIIRHEGYLPYDKSGDWLYHFIEGMSLFMCALALYACSVPFKHTYQADLDKFGEFMVPPGFGAVYLAAPILLLAIIVHPNLNADFVSDTAWTYAMYLESAALFPQLYMFLRQSS---GVVELLTAHFVFALGFGRIMELLFWVYSYHELADSSGSRLPGYLAVFSQIVQLIMMLDFFWYYFMAVKNATPLVLPS 360          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9830.28640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0SUU4_9STRA1.090e-15570.28Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A812YBP6_SYMMI4.200e-12068.20KdelR protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A7S2GHT0_9STRA2.880e-10557.35Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7R9U936_9STRA1.010e-10255.31Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6V2QBA8_HETAK1.430e-10253.38Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2SS64_9STRA7.680e-10154.24Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0AL10_9STRA1.660e-9952.21Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2H0H3_9STRA2.080e-9851.10Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S3PUD9_9STRA4.740e-9750.94Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S0UKE6_9STRA6.920e-9753.38Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9830contigD-dudresnayi_contig9830:1764..3218 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score292.7
Seed ortholog evalue1.9e-76
Seed eggNOG ortholog35128.Thaps40826
KEGG koko:K10949
KEGG Pathwayko05110,map05110
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0012505,GO:0016020,GO:0031984,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0098827
EggNOG free text desc.ER retention sequence binding
EggNOG OGs2XEYH@2836,COG5196@1,KOG3106@2759
COG Functional cat.U
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Hectar predicted targeting categoryother localisation
Exons5
Model size1122
Cds size885
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930941.2040553-UTR-D-dudresnayi_contig9830:1763..18331622930941.2040553-UTR-D-dudresnayi_contig9830:1763..1833Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9830 1764..1833 +
1690557973.7181225-UTR-D-dudresnayi_contig9830:1763..18331690557973.7181225-UTR-D-dudresnayi_contig9830:1763..1833Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9830 1764..1833 +
1622930941.4697087-UTR-D-dudresnayi_contig9830:3051..32181622930941.4697087-UTR-D-dudresnayi_contig9830:3051..3218Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9830 3052..3218 +
1690557973.8008316-UTR-D-dudresnayi_contig9830:3051..32181690557973.8008316-UTR-D-dudresnayi_contig9830:3051..3218Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9830 3052..3218 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930941.2287676-CDS-D-dudresnayi_contig9830:1833..18651622930941.2287676-CDS-D-dudresnayi_contig9830:1833..1865Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9830 1834..1865 +
1690557973.734875-CDS-D-dudresnayi_contig9830:1833..18651690557973.734875-CDS-D-dudresnayi_contig9830:1833..1865Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9830 1834..1865 +
1622930941.2766538-CDS-D-dudresnayi_contig9830:1931..20491622930941.2766538-CDS-D-dudresnayi_contig9830:1931..2049Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9830 1932..2049 +
1690557973.748895-CDS-D-dudresnayi_contig9830:1931..20491690557973.748895-CDS-D-dudresnayi_contig9830:1931..2049Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9830 1932..2049 +
1622930941.3876705-CDS-D-dudresnayi_contig9830:2118..24861622930941.3876705-CDS-D-dudresnayi_contig9830:2118..2486Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9830 2119..2486 +
1690557973.763046-CDS-D-dudresnayi_contig9830:2118..24861690557973.763046-CDS-D-dudresnayi_contig9830:2118..2486Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9830 2119..2486 +
1622930941.4212713-CDS-D-dudresnayi_contig9830:2602..27291622930941.4212713-CDS-D-dudresnayi_contig9830:2602..2729Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9830 2603..2729 +
1690557973.7732484-CDS-D-dudresnayi_contig9830:2602..27291690557973.7732484-CDS-D-dudresnayi_contig9830:2602..2729Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9830 2603..2729 +
1622930941.4463224-CDS-D-dudresnayi_contig9830:2811..30511622930941.4463224-CDS-D-dudresnayi_contig9830:2811..3051Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9830 2812..3051 +
1690557973.7834332-CDS-D-dudresnayi_contig9830:2811..30511690557973.7834332-CDS-D-dudresnayi_contig9830:2811..3051Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9830 2812..3051 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9830.28640.1prot_D-dudresnayi_contig9830.28640.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9830 1834..3051 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9830.28640.1

>prot_D-dudresnayi_contig9830.28640.1 ID=prot_D-dudresnayi_contig9830.28640.1|Name=mRNA_D-dudresnayi_contig9830.28640.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=295bp
MNSINFEDTKKLLTNTYKQHTKNIAIWGGFLTCSLLVYYFLSSGDFSFLL
TYASFMRCFGFGVLNYRMWTTKSAKGVSVKTLELYGLTFVVRLLSILRHQ
GYLPFDKTGDWFYHIVEIMSFASVGLALYGLFGPLISTYDEKHDRFGNLH
IPSEFGIAYLVVPCVILAVIFHPALNREFFSDTCWTLSMYLEAVAMLPQI
YMFQRQASDEGGTVEALIGHTVFALGFARVFELIFWVGSFKELSDWSGSR
IPGYIVLLSQLGHLLVMADFFYYYFMSLSKGLPMELPTTYSGVV*
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mRNA from alignment at D-dudresnayi_contig9830:1764..3218+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9830.28640.1 ID=mRNA_D-dudresnayi_contig9830.28640.1|Name=mRNA_D-dudresnayi_contig9830.28640.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1455bp|location=Sequence derived from alignment at D-dudresnayi_contig9830:1764..3218+ (Desmarestia dudresnayi DdudBR16 monoicous)
GTTTGCGCGGATTGAAGAACGCCTACAGGACACATTAGATTGCAGCATAA ATTAATCATTTGTTGTATAGATGAACTCGATAAACTTTGAAGATACGAAA AAGTACGATTACACTACATTGATATTGCAACATCCACACTAAATTGCACG TTTCGATTATTTATTTAGGTTGCTTACTAACACATATAAACAACATACTA AGAACATCGCTATTTGGGGTGGTTTCTTAACATGTTCCTTGTTAGTATAC TACTTCCTCTCTAGTGGTGATTTCTCATTTTTGTTGGTAAGTGTTCGTTG TTAGTTTTCTGAAAGTACTTCACATCAGTTTACGCTATTTCATTGTAACA TACAGACTTATGCCTCATTTATGCGCTGCTTCGGATTTGGTGTTCTTAAT TACCGAATGTGGACAACGAAGTCTGCAAAGGGAGTCTCCGTGAAGACACT GGAGCTATACGGTCTGACCTTCGTGGTGCGCCTGCTGTCCATCCTGCGGC ACCAGGGATACCTGCCTTTCGACAAAACAGGAGATTGGTTCTACCACATA GTAGAAATCATGAGTTTTGCATCAGTAGGTCTAGCGCTGTATGGACTGTT TGGCCCGCTGATCTCCACTTACGACGAAAAACACGACCGCTTCGGTAACC TGCACATCCCCTCGGAGTTCGGCATCGCCTACCTGGTCGTCCCCTGTGTT ATCCTGGCTGTCATCTTCCACCCGTAAGATATAGCTATAAGGCATTGTGT TTTTAATATATGTTGTTTCCTGTTATTATTTCGAGTATTGAAACTCACTT GCTGTCTGTCTGCTTGCACCACCACTGCTGCTGCTGTAGGGCGCTGAACC GCGAGTTCTTCTCAGACACCTGCTGGACCCTGTCCATGTACCTGGAGGCG GTAGCCATGCTCCCTCAGATCTACATGTTCCAGCGCCAGGCCTCGGACGA GGGAGGAACTGTGGAGGTGCGTCCGCAGTGCACTGTCAATCCCTGCATTC CTCTTATTGACTCCATTCCATCAATACTTTGTTTTGTCATTTACTCAGGC ATTAATCGGCCACACCGTCTTTGCACTGGGATTTGCGCGCGTGTTCGAGT TGATCTTCTGGGTGGGCAGCTTCAAGGAGCTCAGCGACTGGTCCGGTAGC CGCATACCCGGATACATCGTACTGCTGTCCCAGCTGGGTCACCTGCTCGT GATGGCCGACTTCTTCTACTACTACTTCATGTCGCTGTCCAAGGGCCTGC CGATGGAGCTGCCCACCACCTACTCGGGGGTAGTCTAAACCCAGTATTAG AGCTGGACTTTAGACTGCCTACCACTACCACGAGAAGTCTTTTTAGAAAA TCAAACATGCATGGGAAACTGCTGCCATATATTGCAGTCATTAGCGTAGA GAATTGAAGGAATGTATGATGGGATTGTTAAGGTCTTTAATTGAAGCATC GTTTC
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9830:1764..3218+

>mRNA_D-dudresnayi_contig9830.28640.1 ID=mRNA_D-dudresnayi_contig9830.28640.1|Name=mRNA_D-dudresnayi_contig9830.28640.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1770bp|location=Sequence derived from alignment at D-dudresnayi_contig9830:1764..3218+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGAACTCGATAAACTTTGAAGATACGAAAAAATGAACTCGATAAACTTT
GAAGATACGAAAAAGTTGCTTACTAACACATATAAACAACATACTAAGAA
CATCGCTATTTGGGGTGGTTTCTTAACATGTTCCTTGTTAGTATACTACT
TCCTCTCTAGTGGTGATTTCTCATTTTTGTTGGTTGCTTACTAACACATA
TAAACAACATACTAAGAACATCGCTATTTGGGGTGGTTTCTTAACATGTT
CCTTGTTAGTATACTACTTCCTCTCTAGTGGTGATTTCTCATTTTTGTTG
ACTTATGCCTCATTTATGCGCTGCTTCGGATTTGGTGTTCTTAATTACCG
AATGTGGACAACGAAGTCTGCAAAGGGAGTCTCCGTGAAGACACTGGAGC
TATACGGTCTGACCTTCGTGGTGCGCCTGCTGTCCATCCTGCGGCACCAG
GGATACCTGCCTTTCGACAAAACAGGAGATTGGTTCTACCACATAGTAGA
AATCATGAGTTTTGCATCAGTAGGTCTAGCGCTGTATGGACTGTTTGGCC
CGCTGATCTCCACTTACGACGAAAAACACGACCGCTTCGGTAACCTGCAC
ATCCCCTCGGAGTTCGGCATCGCCTACCTGGTCGTCCCCTGTGTTATCCT
GGCTGTCATCTTCCACCCACTTATGCCTCATTTATGCGCTGCTTCGGATT
TGGTGTTCTTAATTACCGAATGTGGACAACGAAGTCTGCAAAGGGAGTCT
CCGTGAAGACACTGGAGCTATACGGTCTGACCTTCGTGGTGCGCCTGCTG
TCCATCCTGCGGCACCAGGGATACCTGCCTTTCGACAAAACAGGAGATTG
GTTCTACCACATAGTAGAAATCATGAGTTTTGCATCAGTAGGTCTAGCGC
TGTATGGACTGTTTGGCCCGCTGATCTCCACTTACGACGAAAAACACGAC
CGCTTCGGTAACCTGCACATCCCCTCGGAGTTCGGCATCGCCTACCTGGT
CGTCCCCTGTGTTATCCTGGCTGTCATCTTCCACCCGGCGCTGAACCGCG
AGTTCTTCTCAGACACCTGCTGGACCCTGTCCATGTACCTGGAGGCGGTA
GCCATGCTCCCTCAGATCTACATGTTCCAGCGCCAGGCCTCGGACGAGGG
AGGAACTGTGGAGGGCGCTGAACCGCGAGTTCTTCTCAGACACCTGCTGG
ACCCTGTCCATGTACCTGGAGGCGGTAGCCATGCTCCCTCAGATCTACAT
GTTCCAGCGCCAGGCCTCGGACGAGGGAGGAACTGTGGAGGCATTAATCG
GCCACACCGTCTTTGCACTGGGATTTGCGCGCGTGTTCGAGTTGATCTTC
TGGGTGGGCAGCTTCAAGGAGCTCAGCGACTGGTCCGGTAGCCGCATACC
CGGATACATCGTACTGCTGTCCCAGCTGGGTCACCTGCTCGTGATGGCCG
ACTTCTTCTACTACTACTTCATGTCGCTGTCCAAGGGCCTGCCGATGGAG
CTGCCCACCACCTACTCGGGGGTAGTCTAAGCATTAATCGGCCACACCGT
CTTTGCACTGGGATTTGCGCGCGTGTTCGAGTTGATCTTCTGGGTGGGCA
GCTTCAAGGAGCTCAGCGACTGGTCCGGTAGCCGCATACCCGGATACATC
GTACTGCTGTCCCAGCTGGGTCACCTGCTCGTGATGGCCGACTTCTTCTA
CTACTACTTCATGTCGCTGTCCAAGGGCCTGCCGATGGAGCTGCCCACCA
CCTACTCGGGGGTAGTCTAA
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