mRNA_D-dudresnayi_contig982.28627.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig982.28627.1
Unique NamemRNA_D-dudresnayi_contig982.28627.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig982.28627.1 vs. uniprot
Match: A0A7S2G3L7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G3L7_9STRA)

HSP 1 Score: 209 bits (532), Expect = 8.690e-64
Identity = 116/236 (49.15%), Postives = 142/236 (60.17%), Query Frame = 1
Query:   28 ILTAEECQHLIDLSENKTYEPALVNVGGGRQKLMSDYRNNDRFIHDDPVTMELIWQRVLKATNDHDQESHNTLLTIPFINDRMAKRGNHKVYHAVGLNERMRFLRYDPGTFFASHYDGSYMRSIEAGIERKGEQSFVTFQLYLNEGFQGGSTRFLSINDTTNHDEDVENETATTTSTIWSNFLTPTKRRSSNRPHYNVIPHTGSVLLFQHDCCHEGAKLYKGRKYAIRSDVMYSNR 735
            + T EEC  +I  +E + +E ALVN GGG Q LM+DYR + R I DDP+  E IWQRV + T D        L   P+ N  M         HAVGLNER+RFL+Y+PG FFASHYDGSYMRS EAG  RKGE+SF+T QLYLN+GF+GG+TRFL   D                       L             +V+P  GSVLLFQHDCCHEG+ L KG KYAIR+DVM++++
Sbjct:    1 VFTPEECHAMIQRAECQGFEAALVNTGGGTQHLMNDYRKSKRVIIDDPIAAEDIWQRVCRITRDE------RLFRAPWCNREM---------HAVGLNERLRFLKYNPGDFFASHYDGSYMRSEEAG-SRKGERSFITLQLYLNDGFEGGATRFLDPRD---------------------EILG-----------VDVVPRAGSVLLFQHDCCHEGSLLVKGVKYAIRTDVMFTSK 188          
BLAST of mRNA_D-dudresnayi_contig982.28627.1 vs. uniprot
Match: A0A433PNT9_9FUNG (Fe2OG dioxygenase domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PNT9_9FUNG)

HSP 1 Score: 176 bits (445), Expect = 3.020e-51
Identity = 103/240 (42.92%), Postives = 130/240 (54.17%), Query Frame = 1
Query:    7 FCIVLHNILTAEECQHLIDLSENKTYEPALVNVGGGRQKLMSDYRNNDRFIHDDPVTMELIWQRVLKATNDHDQESHNTLLTIPFINDRMAKRGNHKVYHAVGLNERMRFLRYDPGTFFASHYDGSYMRSIEAGIERKGEQSFVTFQLYLNEGFQGGSTRFLSINDTTNHDEDVENETATTTSTIWSNFLTPTKRRSSNRPHYNVIPHTGSVLLFQHDCCHEGAKLYKGRKYAIRSDVMY 726
            + ++L N+ T EECQ LIDLSE + Y PAL+N+GGGR+ L +D RNNDR+I DDP   EL+W+R+               +   F ND M           VGLNER+RFLRYDPG  F +H DG+Y R    G +   E S VT QLYLNEGF+GG T FL                                   S R  + V+P TG VL+F+H   HEG+ + +GRKYAIR+DVMY
Sbjct:   53 YVMILENVCTPEECQRLIDLSEAQNYTPALLNIGGGRETLATDVRNNDRYIRDDPELAELLWRRL------------KYFIPATFANDSMD---------VVGLNERLRFLRYDPGQKFEAHMDGTYYRP---GGQ---EMSCVTIQLYLNEGFKGGETTFLG----------------------------------SGRD-FAVVPKTGMVLIFEHALLHEGSAVTEGRKYAIRTDVMY 230          
BLAST of mRNA_D-dudresnayi_contig982.28627.1 vs. uniprot
Match: A0A7S2BVR8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BVR8_9STRA)

HSP 1 Score: 174 bits (441), Expect = 2.170e-49
Identity = 107/286 (37.41%), Postives = 146/286 (51.05%), Query Frame = 1
Query:    7 FCIVLHNILTAEECQHLIDLSENKT----YEPALVNVGGGRQKLMSDYRNNDRFIHDDPVTMELIWQRVLKATNDH---------------DQESHNT-------------------------LLTIP-FINDRMAKRGNHKVYHAVGLNERMRFLRYDPGTFFASHYDGSYMRSIEAGIERKGEQSFVTFQLYLNEGFQGGSTRFLSINDTTNHDEDVENETATTTSTIWSNFLTPTKRRSSNRPHYNVIPHTGSVLLFQHDCCHEGAKLYKGRKYAIRSDVMYS 729
            F  VLH++LT  EC  LI  +E +T    Y+ AL+N GGG ++ M + RNNDR + DD V  E +WQRVL+    H                Q +H T                         +L +P  + D +      +  +AVGLNER+RFLRYDPG +FA H+DG++ R  + G  R+ E+S+VTFQLYLN GF+GG+TRFL+      +D  V                             +V+P TGSVLLF+H   HEG+ L  GRKY +R+DVMY+
Sbjct:   57 FACVLHHVLTERECDALIARAEARTGEAGYKTALINAGGGEERQMLNLRNNDRALIDDAVLAEEMWQRVLEVMRYHCDTRGRAPEEEGEKTKQTNHPTSTTSRPRFSFAGIFGRSTPAPAPAPVLDVPGLMADLLCNTAGAQPLYAVGLNERLRFLRYDPGNYFAPHFDGTFTRGRDVGELRQFERSYVTFQLYLNGGFEGGATRFLN-----GYDRSVG---------------------------IDVVPRTGSVLLFEHAVLHEGSLLVSGRKYTLRTDVMYN 310          
BLAST of mRNA_D-dudresnayi_contig982.28627.1 vs. uniprot
Match: UPI00035962AC (probable prolyl 4-hydroxylase 3 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00035962AC)

HSP 1 Score: 169 bits (427), Expect = 8.790e-49
Identity = 102/243 (41.98%), Postives = 126/243 (51.85%), Query Frame = 1
Query:    1 NKFCIVLHNILTAEECQHLIDLSENKTYEPALVNVGGGRQKLMSDYRNNDRFIHDDPVTMELIWQRVLKATNDHDQESHNTLLTIPFINDRMAKRGNHKVYHAVGLNERMRFLRYDPGTFFASHYDGSYMRSIEAGIERKGEQSFVTFQLYLNEGFQGGSTRFLSINDTTNHDEDVENETATTTSTIWSNFLTPTKRRSSNRPHYNVIPHTGSVLLFQHDCCHEGAKLYKGRKYAIRSDVMYS 729
            +K   VL+N+LT +EC+ LID +E K YE ALVN G GRQK M+D RN+ R I D       +W+R+                  P    R            +GLNER+R+LRYD G +F  HYDG Y+R         GE+S +TFQLYLNEGFQGG+T FL                        SNF               V+P TGSVL+FQHD  HEG +L KGRKYA+R+DVMYS
Sbjct:   27 DKLAFVLYNVLTPQECKELIDKTEKKGYELALVNTGFGRQKAMTDIRNSSRCIIDSEEYATELWRRIKDFVP-------------PVFKGRKV----------LGLNERLRYLRYDKGEYFKPHYDGVYIRE-------NGERSCITFQLYLNEGFQGGATNFLG-----------------------SNFEVEP-----------VVPKTGSVLIFQHDIFHEGEELKKGRKYAMRTDVMYS 205          
BLAST of mRNA_D-dudresnayi_contig982.28627.1 vs. uniprot
Match: UPI0018D81E07 (probable prolyl 4-hydroxylase 10 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D81E07)

HSP 1 Score: 168 bits (426), Expect = 2.180e-48
Identity = 101/243 (41.56%), Postives = 125/243 (51.44%), Query Frame = 1
Query:    4 KFCIVLHNILTAEECQHLIDLSENKTYEPALVNVGGGRQKLMSDYRNNDRFIHDDPVTMELIWQRVLKATNDHDQESHNTLLTIPFINDRMAKRGNHKVYHAVGLNERMRFLRYDPGTFFASHYDGSYMRSIEAGIERKGEQSFVTFQLYLNEGFQGGSTRFLSINDTTNHDEDVENETATTTSTIWSNFLTPTKRRSSNRPHYNVIPHTGSVLLFQHDCCHEGAKLYKGRKYAIRSDVMYSN 732
            K    L N+ T EEC+ LI  SE K YE ALVN+GGGRQKLM   RNN R + D    ++  W+R+ +             +  PF             Y A+GLNER+RFLRYDPG +F  H+DGSY R       + GE S VT Q+YLNEGF+GGST FL      N D+D                           P    +P  G VL+F+H   HEG+ L  GRKYAIR+DVMYS+
Sbjct:   41 KTAFFLDNVFTKEECKELIRRSEEKGYEQALVNIGGGRQKLMLSARNNQRCLIDSTELVDAFWERLAE------------FIPQPFYG-----------YKALGLNERLRFLRYDPGEYFKPHFDGSYER-------KNGEHSMVTVQIYLNEGFKGGSTTFLPY---FNSDDD---------------------------PPVECVPKIGRVLIFEHRLYHEGSMLKDGRKYAIRTDVMYSS 223          
BLAST of mRNA_D-dudresnayi_contig982.28627.1 vs. uniprot
Match: A0A7S3HKZ5_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HKZ5_9STRA)

HSP 1 Score: 165 bits (418), Expect = 2.800e-48
Identity = 81/136 (59.56%), Postives = 101/136 (74.26%), Query Frame = 1
Query:  343 YDPGTFFASHYDGSYMRSIEAGIERKGEQSFVTFQLYLNEGFQGGSTRFLSIN-----DTTNHDEDVENETATTTSTIWSNFLTPTKRRSSNRPHYNVIPHTGSVLLFQHDCCHEGAKLYKGRKYAIRSDVMYSNR 735
            YDPGTFFA HYDGSY+R+ EAG+ER GEQSFVTFQLYLNE F+GGSTRF+S +     DT + DE+   +T    S +W +F TP +R+ +      V+P TGSVLLFQHDC HEGA++  GRKYA+R+DVMY+ R
Sbjct:    1 YDPGTFFAPHYDGSYVRAKEAGVERSGEQSFVTFQLYLNEDFKGGSTRFMSQDAIYGDDTQDSDEETAEDTK---SALWFSFRTPPRRKKARGDSIKVVPRTGSVLLFQHDCLHEGARVRAGRKYAVRTDVMYTAR 133          
BLAST of mRNA_D-dudresnayi_contig982.28627.1 vs. uniprot
Match: UPI001E1D2E0D (uncharacterized protein LOC123556340 isoform X1 n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2E0D)

HSP 1 Score: 166 bits (421), Expect = 1.790e-47
Identity = 96/242 (39.67%), Postives = 124/242 (51.24%), Query Frame = 1
Query:    4 KFCIVLHNILTAEECQHLIDLSENKTYEPALVNVGGGRQKLMSDYRNNDRFIHDDPVTMELIWQRVLKATNDHDQESHNTLLTIPFINDRMAKRGNHKVYHAVGLNERMRFLRYDPGTFFASHYDGSYMRSIEAGIERKGEQSFVTFQLYLNEGFQGGSTRFLSINDTTNHDEDVENETATTTSTIWSNFLTPTKRRSSNRPHYNVIPHTGSVLLFQHDCCHEGAKLYKGRKYAIRSDVMYS 729
            K   VL N+ + EEC+  I  +E   YE ALVNVGGGRQ +M D RNN R I D     + IWQR+ K                 +I +    R        + LNER+RFL+YDPG +FA H DG Y+R         GE+S++T QLYLNEGF+GGST F++                                  + +    V+P TG VL+FQHD  HEG+ L KGRKY++R+DVMYS
Sbjct:   67 KLAFVLRNVFSDEECKDYIKKTEKMGYEDALVNVGGGRQCMMKDVRNNTRCIWDSFEEADRIWQRIKK-----------------YIPETWKSR------KVMALNERLRFLKYDPGEYFAPHMDGMYIRP-------NGEKSYITIQLYLNEGFEGGSTTFMNF---------------------------------AEKERVEVVPETGMVLVFQHDIMHEGSALIKGRKYSMRTDVMYS 245          
BLAST of mRNA_D-dudresnayi_contig982.28627.1 vs. uniprot
Match: A0A2T7PL21_POMCA (Fe2OG dioxygenase domain-containing protein n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PL21_POMCA)

HSP 1 Score: 165 bits (417), Expect = 2.420e-47
Identity = 94/242 (38.84%), Postives = 126/242 (52.07%), Query Frame = 1
Query:    4 KFCIVLHNILTAEECQHLIDLSENKTYEPALVNVGGGRQKLMSDYRNNDRFIHDDPVTMELIWQRVLKATNDHDQESHNTLLTIPFINDRMAKRGNHKVYHAVGLNERMRFLRYDPGTFFASHYDGSYMRSIEAGIERKGEQSFVTFQLYLNEGFQGGSTRFLSINDTTNHDEDVENETATTTSTIWSNFLTPTKRRSSNRPHYNVIPHTGSVLLFQHDCCHEGAKLYKGRKYAIRSDVMYS 729
            +   VLHN+L+ EEC+  I  +E K Y  AL+N+GGG++ LM+D RN+DR I D       +WQR+ +               IP   D  A          +GLNER+RFLRYDPG +F  H DG Y R         GE SF+T Q+YLN+GF+GGST F+S++                                  R    V+P  GSVL+FQH+  HEG+ L +GRKY++R+DVMYS
Sbjct:   31 RLAFVLHNVLSPEECKQYISQTEEKGYVKALLNIGGGKELLMTDVRNSDRCIIDSVEEALKVWQRIKEY--------------IPQEWDGRA---------VIGLNERLRFLRYDPGQYFKPHMDGCYSRE-------NGEMSFITIQIYLNDGFEGGSTTFMSLD---------------------------------GRQRLEVVPKAGSVLVFQHNIYHEGSVLKEGRKYSVRTDVMYS 209          
BLAST of mRNA_D-dudresnayi_contig982.28627.1 vs. uniprot
Match: UPI001B8897D8 (probable prolyl 4-hydroxylase 8 n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B8897D8)

HSP 1 Score: 164 bits (415), Expect = 3.590e-47
Identity = 94/243 (38.68%), Postives = 124/243 (51.03%), Query Frame = 1
Query:    1 NKFCIVLHNILTAEECQHLIDLSENKTYEPALVNVGGGRQKLMSDYRNNDRFIHDDPVTMELIWQRVLKATNDHDQESHNTLLTIPFINDRMAKRGNHKVYHAVGLNERMRFLRYDPGTFFASHYDGSYMRSIEAGIERKGEQSFVTFQLYLNEGFQGGSTRFLSINDTTNHDEDVENETATTTSTIWSNFLTPTKRRSSNRPHYNVIPHTGSVLLFQHDCCHEGAKLYKGRKYAIRSDVMYS 729
            NK   +LHN+ T EEC+  I  +E   YE AL+NVGGGRQ L +D RN+ R I D    +++IW+++                  PF+          K +   GLNER+RFLRYDPG +F  HYDG+Y+R         GE S +T   YLNEGF+GG+T F        H  D +                              +P TGSVL+FQHD  HEG+ L KGRKY++R+D+MYS
Sbjct:   16 NKLAFILHNVFTKEECEAFIKKTEEMGYEQALLNVGGGRQTLRTDIRNSSRCIWDSQEQVDIIWKKIQ-----------------PFVPPVF------KGHTVCGLNERLRFLRYDPGDYFKPHYDGAYVRE-------NGEGSLITLMWYLNEGFKGGNTTFFY------HGADPKG--------------------------VPCVPKTGSVLIFQHDILHEGSMLSKGRKYSVRTDIMYS 196          
BLAST of mRNA_D-dudresnayi_contig982.28627.1 vs. uniprot
Match: A0A819V4F7_9BILA (Hypothetical protein n=10 Tax=Rotaria TaxID=231623 RepID=A0A819V4F7_9BILA)

HSP 1 Score: 163 bits (412), Expect = 9.570e-47
Identity = 94/242 (38.84%), Postives = 128/242 (52.89%), Query Frame = 1
Query:    1 NKFCIVLHNILTAEECQHLIDLSENKTYEPALVNVGGGRQKLMSDYRNNDRFIHDDPVTMELIWQRVLKATNDHDQESHNTLLTIPFINDRMAKRGNHKVYHAVGLNERMRFLRYDPGTFFASHYDGSYMRSIEAGIERKGEQSFVTFQLYLNEGFQGGSTRFLSINDTTNHDEDVENETATTTSTIWSNFLTPTKRRSSNRPHYNVIPHTGSVLLFQHDCCHEGAKLYKGRKYAIRSDVMY 726
            NK   ++ NI T +ECQ  I+LSE + Y PA VNVGG   +LM+D+RN+DR + DD      ++QR+             + L   + N           Y  VGLNER+RFLRYDPG +F  H DG + R+     +   EQSF+T QLYLNEG++GG T F+  +D+T                              N P    +P TG VL+F+H   HEG++L +GRKYA+R+DVMY
Sbjct:   14 NKLAFLIFNIFTPDECQQWIELSEQRGYSPATVNVGGEMLQLMTDFRNSDRCMIDDVAMARTLFQRI------------ESFLPQTWKN-----------YQLVGLNERLRFLRYDPGQYFEPHMDGEFHRN-----DGSNEQSFITIQLYLNEGYKGGETTFVHYSDST-----------------------------KNVP---CVPRTGMVLVFEHRLLHEGSRLIEGRKYAVRTDVMY 195          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig982.28627.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2G3L7_9STRA8.690e-6449.15Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A433PNT9_9FUNG3.020e-5142.92Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A7S2BVR8_9STRA2.170e-4937.41Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
UPI00035962AC8.790e-4941.98probable prolyl 4-hydroxylase 3 n=1 Tax=Aplysia ca... [more]
UPI0018D81E072.180e-4841.56probable prolyl 4-hydroxylase 10 n=1 Tax=Patiria m... [more]
A0A7S3HKZ5_9STRA2.800e-4859.56Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
UPI001E1D2E0D1.790e-4739.67uncharacterized protein LOC123556340 isoform X1 n=... [more]
A0A2T7PL21_POMCA2.420e-4738.84Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
UPI001B8897D83.590e-4738.68probable prolyl 4-hydroxylase 8 n=1 Tax=Gigantopel... [more]
A0A819V4F7_9BILA9.570e-4738.84Hypothetical protein n=10 Tax=Rotaria TaxID=231623... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig982contigD-dudresnayi_contig982:21012..21746 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score167.2
Seed ortholog evalue9.8e-39
Seed eggNOG ortholog6500.XP_005110744.1
EggNOG free text desc.Prolyl 4-hydroxylase alpha subunit homologues.
EggNOG OGs2BV78@1,2S0YC@2759,39KFX@33154,3BR54@33208,3D7VD@33213
COG Functional cat.S
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size735
Cds size735
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930939.6870785-CDS-D-dudresnayi_contig982:21011..217461622930939.6870785-CDS-D-dudresnayi_contig982:21011..21746Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig982 21012..21746 +
1690557973.105156-CDS-D-dudresnayi_contig982:21011..217461690557973.105156-CDS-D-dudresnayi_contig982:21011..21746Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig982 21012..21746 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig982.28627.1prot_D-dudresnayi_contig982.28627.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig982 21012..21746 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig982.28627.1

>prot_D-dudresnayi_contig982.28627.1 ID=prot_D-dudresnayi_contig982.28627.1|Name=mRNA_D-dudresnayi_contig982.28627.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=245bp
NKFCIVLHNILTAEECQHLIDLSENKTYEPALVNVGGGRQKLMSDYRNND
RFIHDDPVTMELIWQRVLKATNDHDQESHNTLLTIPFINDRMAKRGNHKV
YHAVGLNERMRFLRYDPGTFFASHYDGSYMRSIEAGIERKGEQSFVTFQL
YLNEGFQGGSTRFLSINDTTNHDEDVENETATTTSTIWSNFLTPTKRRSS
NRPHYNVIPHTGSVLLFQHDCCHEGAKLYKGRKYAIRSDVMYSNR
back to top

mRNA from alignment at D-dudresnayi_contig982:21012..21746+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig982.28627.1 ID=mRNA_D-dudresnayi_contig982.28627.1|Name=mRNA_D-dudresnayi_contig982.28627.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=735bp|location=Sequence derived from alignment at D-dudresnayi_contig982:21012..21746+ (Desmarestia dudresnayi DdudBR16 monoicous)
AACAAATTTTGTATTGTTTTGCACAATATTCTCACTGCAGAAGAGTGTCA ACATCTAATTGATTTATCAGAAAATAAAACTTACGAGCCAGCTTTGGTTA ATGTTGGAGGTGGAAGACAGAAGTTAATGTCAGACTACCGCAACAATGAT CGTTTCATACATGACGATCCAGTTACAATGGAACTAATATGGCAAAGAGT GTTAAAAGCGACAAATGATCATGATCAAGAATCACATAATACACTATTAA CTATTCCTTTTATTAATGATCGTATGGCTAAAAGAGGGAATCACAAAGTT TATCATGCAGTTGGATTAAATGAAAGAATGCGATTTTTAAGATATGATCC AGGAACATTCTTTGCATCACATTATGATGGTTCTTATATGCGTTCAATTG AAGCAGGAATAGAACGAAAGGGAGAACAATCATTTGTTACCTTTCAATTA TATTTAAATGAAGGTTTTCAAGGTGGATCAACTAGATTTTTATCTATTAA TGATACTACTAATCATGACGAGGATGTTGAAAATGAAACGGCTACTACAA CTTCAACAATCTGGTCAAATTTTCTAACTCCAACCAAACGTCGTAGCAGT AATCGTCCTCATTATAATGTTATCCCACATACAGGCTCAGTGTTATTATT TCAACATGATTGTTGTCACGAAGGTGCAAAACTATATAAAGGACGTAAAT ATGCGATACGTTCTGATGTTATGTATTCGAATCGG
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig982:21012..21746+

>mRNA_D-dudresnayi_contig982.28627.1 ID=mRNA_D-dudresnayi_contig982.28627.1|Name=mRNA_D-dudresnayi_contig982.28627.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1470bp|location=Sequence derived from alignment at D-dudresnayi_contig982:21012..21746+ (Desmarestia dudresnayi DdudBR16 monoicous)
AACAAATTTTGTATTGTTTTGCACAATATTCTCACTGCAGAAGAGTGTCA
ACATCTAATTGATTTATCAGAAAATAAAACTTACGAGCCAGCTTTGGTTA
ATGTTGGAGGTGGAAGACAGAAGTTAATGTCAGACTACCGCAACAATGAT
CGTTTCATACATGACGATCCAGTTACAATGGAACTAATATGGCAAAGAGT
GTTAAAAGCGACAAATGATCATGATCAAGAATCACATAATACACTATTAA
CTATTCCTTTTATTAATGATCGTATGGCTAAAAGAGGGAATCACAAAGTT
TATCATGCAGTTGGATTAAATGAAAGAATGCGATTTTTAAGATATGATCC
AGGAACATTCTTTGCATCACATTATGATGGTTCTTATATGCGTTCAATTG
AAGCAGGAATAGAACGAAAGGGAGAACAATCATTTGTTACCTTTCAATTA
TATTTAAATGAAGGTTTTCAAGGTGGATCAACTAGATTTTTATCTATTAA
TGATACTACTAATCATGACGAGGATGTTGAAAATGAAACGGCTACTACAA
CTTCAACAATCTGGTCAAATTTTCTAACTCCAACCAAACGTCGTAGCAGT
AATCGTCCTCATTATAATGTTATCCCACATACAGGCTCAGTGTTATTATT
TCAACATGATTGTTGTCACGAAGGTGCAAAACTATATAAAGGACGTAAAT
ATGCGATACGTTCTGATGTTATGTATTCGAATCGGAACAAATTTTGTATT
GTTTTGCACAATATTCTCACTGCAGAAGAGTGTCAACATCTAATTGATTT
ATCAGAAAATAAAACTTACGAGCCAGCTTTGGTTAATGTTGGAGGTGGAA
GACAGAAGTTAATGTCAGACTACCGCAACAATGATCGTTTCATACATGAC
GATCCAGTTACAATGGAACTAATATGGCAAAGAGTGTTAAAAGCGACAAA
TGATCATGATCAAGAATCACATAATACACTATTAACTATTCCTTTTATTA
ATGATCGTATGGCTAAAAGAGGGAATCACAAAGTTTATCATGCAGTTGGA
TTAAATGAAAGAATGCGATTTTTAAGATATGATCCAGGAACATTCTTTGC
ATCACATTATGATGGTTCTTATATGCGTTCAATTGAAGCAGGAATAGAAC
GAAAGGGAGAACAATCATTTGTTACCTTTCAATTATATTTAAATGAAGGT
TTTCAAGGTGGATCAACTAGATTTTTATCTATTAATGATACTACTAATCA
TGACGAGGATGTTGAAAATGAAACGGCTACTACAACTTCAACAATCTGGT
CAAATTTTCTAACTCCAACCAAACGTCGTAGCAGTAATCGTCCTCATTAT
AATGTTATCCCACATACAGGCTCAGTGTTATTATTTCAACATGATTGTTG
TCACGAAGGTGCAAAACTATATAAAGGACGTAAATATGCGATACGTTCTG
ATGTTATGTATTCGAATCGG
back to top