mRNA_D-dudresnayi_contig98.28607.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig98.28607.1
Unique NamemRNA_D-dudresnayi_contig98.28607.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig98.28607.1 vs. uniprot
Match: A0A7S3GUR9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GUR9_9STRA)

HSP 1 Score: 343 bits (881), Expect = 1.140e-111
Identity = 175/278 (62.95%), Postives = 211/278 (75.90%), Query Frame = 1
Query:   31 LRRYIDFLREKGINNYVSLPEIAVMGDTSSGKSSLLSAITQIQLPSNDKITTRCPLRLRMEESDQVKAVIRIRWDSTLPEVSGTPWAEVKIDTWEGVDEHIASAQQAILDERAVAVASDVVEVDVYGPSCLNLTVIDLPGIVRSVGKSESATLIEDIKKLTRSYLDNPRCVILAVHPANVDFHNSQIMHDAKEVDPATARTIPVITKPDQIDSGAEGNVHDLLLGKLMEFDMGFHMVKCRGQKDLNDGKTLQQGLEDEQTFFAKTAPWKDEPNSKLFG 864
            +R +ID L   GIN YVSLPEIAVMGDTSSGKSSLLSA+ Q+QLPSND+ITTRCPLRLRME+S++  A + I+WD+       T W  VK+D+W+ V   I+ AQ  IL    V VA DVVEV+VYGP C++LT+IDLPGIVR+VGK+E+  LI+DIK+L  SYL NPRCVILAV PANVDFHNSQIM DA +VDP T RTIPVITKPD ID GAEG V  LLLG+ + F+MGFHMVKCR QK LND  ++++G+ +E  +F    PWKD  +  LFG
Sbjct:    1 MREFIDELHNNGINQYVSLPEIAVMGDTSSGKSSLLSALAQLQLPSNDQITTRCPLRLRMEKSEKKHAQVGIKWDAASAYKDETAWPVVKLDSWDDVANKISQAQALILQRGQVEVAFDVVEVNVYGPECIDLTLIDLPGIVRTVGKNETKRLIDDIKRLIDSYLSNPRCVILAVQPANVDFHNSQIMADAHQVDPDTRRTIPVITKPDLIDVGAEGGVKALLLGEEVNFEMGFHMVKCRNQKALNDNVSMEEGMREETKYFNSVIPWKD-LDKDLFG 277          
BLAST of mRNA_D-dudresnayi_contig98.28607.1 vs. uniprot
Match: A0A7S0R8D1_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0R8D1_9CHLO)

HSP 1 Score: 327 bits (837), Expect = 8.970e-103
Identity = 169/292 (57.88%), Postives = 212/292 (72.60%), Query Frame = 1
Query:   16 QGDEVLRRYIDFLREKGINNYVSLPEIAVMGDTSSGKSSLLSAITQIQLPSNDKITTRCPLRLRMEESDQVKAVIRIRWDSTLPEVSGTPWAEVKIDTWEGVDEHIASAQQAILDE---------RAVAVASDVVEVDVYGPSCLNLTVIDLPGIVRSVGKSESATLIEDIKKLTRSYLDNPRCVILAVHPANVDFHNSQIMHDAKEVDPATARTIPVITKPDQIDSGAEGNVHDLLLGKLMEFDMGFHMVKCRGQKDLNDGKTLQQGLEDEQTFFAKTAPWKDEPNSKLFG 864
            +G+E LR ++DFL E  IN +++LPEIAVMGDTSSGKSSLLSAI+QIQLPSND++TTRCPLRL M  SD  KA + I+W S+        + +  +D WE +   I  AQQ IL++         + V+VA D+VEVDV+GP C++LT+IDLPGIVR   K+ESATL EDIK L   YL N RCVILAV PANVD HNS+IM DA++VDP T RTIPVITKPD ID+GAE +V D+LLG+    +MGFHMVKCRGQK LN+GK++Q+G+++E+ FF    PW  E     FG
Sbjct:   21 KGNERLREFVDFLHEHNINQHINLPEIAVMGDTSSGKSSLLSAISQIQLPSNDQLTTRCPLRLHMARSDCAKARVGIKWHSSSDYKDEKVYPQKHLDGWEDIPTEIERAQQCILEQARTGSKSATKDVSVARDIVEVDVFGPECVDLTLIDLPGIVRFTSKNESATLGEDIKALIDEYLKNERCVILAVAPANVDLHNSEIMADARKVDPTTRRTIPVITKPDLIDAGAEQSVLDMLLGRQHATEMGFHMVKCRGQKALNEGKSMQEGMQEEEHFFTTQEPWCKEEARDFFG 312          
BLAST of mRNA_D-dudresnayi_contig98.28607.1 vs. uniprot
Match: B7G6F7_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G6F7_PHATC)

HSP 1 Score: 255 bits (651), Expect = 4.920e-81
Identity = 137/262 (52.29%), Postives = 172/262 (65.65%), Query Frame = 1
Query:   79 VSLPEIAVMGDTSSGKSSLLSAITQIQLPSNDKITTRCPLRLRMEESDQVKAVIRIRWDSTLPEVSGTPWAEVKIDTWEGVDEHIASAQQAILDERAVAVASDVVEVDVYGPSCLNLTVIDLPGIVRSVGKSESATLIEDIKKLTRSYLDNPRCVILAVHPANVDFHNSQIMHDAKEVDPATARTIPVITKPDQIDSGAEGNVHDLLLGKLMEFDMGFHMVKCRGQKDLNDGKTLQQGLEDEQTFFAKTAPWKDEPNSKLFG 864
            + LP I VMGDTSSGKSSLLS ++ ++LPS+ K+TTRCP+ + M+ S    A + ++W S   E        +    WE +   I  AQQ +L      VA DVV + +  P+  +LT+IDLPG VRS  + ES TL+ED++ L   YL N RCVILAV PANVDFHNSQIM DA +VDP T RTIPVITKPD ID GAE +V DLLLGK M F +GFHMVK RGQ  L+  +TL+QGL +EQ +F    PWK   +  +FG
Sbjct:    1 MDLPTICVMGDTSSGKSSLLSNLSLVELPSSHKMTTRCPIMIHMKRSGTTLARVTVQWRSHETERPDFGERILSESLWEKIPGIILEAQQFVLTHTGKEVAPDVVSLQIQAPNMQDLTLIDLPGTVRSKARDESETLVEDVEALMDDYLRNSRCVILAVVPANVDFHNSQIMADAMQVDPQTIRTIPVITKPDLIDEGAESDVVDLLLGKKMTFSLGFHMVKGRGQAALDRSETLEQGLAEEQCYFDTNDPWKSVTDRSVFG 262          
BLAST of mRNA_D-dudresnayi_contig98.28607.1 vs. uniprot
Match: K0T0D5_THAOC (Dynamin-type G domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T0D5_THAOC)

HSP 1 Score: 255 bits (651), Expect = 1.840e-79
Identity = 144/306 (47.06%), Postives = 193/306 (63.07%), Query Frame = 1
Query:   16 QGDEVLRRYIDFLREKGINNYVSLPEIAVMGDTSSGKSSLLSAITQIQLPSNDKITTRCPLRLRMEESDQVKAVIRIRWDSTLPEVSGTPWAEVKID--TWEGVDEHIASAQQAILDERAVAVASDVVEVDVYGPSCLNLTVIDLPGIVRSVGKSESATLIEDIKKLTRSYLDNPRCVILAVHPANVDFHNSQIMHDAKEVDPATARTIPVITKPDQIDSGAEGNVHDLLLGKLME-FDMGFHMVKC--------------------RGQKDLNDGKTLQQGLEDEQTFFAKTAPWKDEPNSKLFG 864
            QG E   +++D L+E  ++ YV LP IAVMGDTSSGKSSLLS I++I+LPS D +TTRCP+ L+M       A ++I W    PE +   +  V+I   +W  +   I++AQ  I+++    VA D+V VD++GP+C NLT+IDLPGIVRSVG  ES +L +DI+ L   YL NPRCVILAV P+NVDFHNSQIM +A++VDP T RTIPV+TKPD ID G E +V DLLLGK  +     F +  C                    RGQ  L++  ++ +G++ E  FF  T PWK+  +  LFG
Sbjct:    7 QGYERYHQFMDKLKESNVDKYVDLPMIAVMGDTSSGKSSLLSNISEIELPSADVLTTRCPIMLKMHHRS---ARVKITWKDK-PEGTSVDFTPVEISESSWSDITNAISAAQTHIVEKSGKEVARDIVSVDLHGPNCENLTLIDLPGIVRSVGIGESTSLTDDIQSLMEDYLKNPRCVILAVQPSNVDFHNSQIMAEARKVDPNTTRTIPVLTKPDLIDIGGEASVRDLLLGKKQKSLRSDFTVQGCVLLVARKLLLHSAPKPLHPGRGQLALDNSLSIGEGVQQEDAFFRNTEPWKNVEDRTLFG 308          
BLAST of mRNA_D-dudresnayi_contig98.28607.1 vs. uniprot
Match: A0A7S1LBJ9_NEODS (Hypothetical protein (Fragment) n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1LBJ9_NEODS)

HSP 1 Score: 242 bits (617), Expect = 1.730e-70
Identity = 137/282 (48.58%), Postives = 184/282 (65.25%), Query Frame = 1
Query:   34 RRYIDFLREKGINNYVSLPEIAVMGDTSSGKSSLLSAITQIQLPSNDKITTRCPLRLRMEESDQ-VKAVIRIRW------DSTLP-EVSGTPWAEVKIDTWEGVDEHIASAQQAILDERA-----VAVASDVVEVDVYGPSCLNLTVIDLPGIVRSVGKSESATLIEDIKKLTRSYLDNPRCVILAVHPANVDFHNSQIMHDAKEVDPATARTIPVITKPDQIDSGAEGNVHDLLLGKLMEFDMGFHMVKCRGQKDLNDGKTLQQGLEDEQTFFAKTAPWKD 840
            R  ++ L   G+  +V+LP IAVMGDTSSGKSSLLSA+  ++ PS+  + TRCP RLRM  SD    A +RI W      ++  P EV+G  + +   D  E V + IA AQ+ I+ E A       VA D +EV V GP+  +LT++DLPGIVRS G  E  +LI DI++L  +YL N RCV+L V PANVD HN+Q++   KEVDP   RT+PV+TKPD ID GAE  V  L+ G+   F+ G++MVKCR Q+D+N+G +L++ LE+EQ FFA   PW+D
Sbjct:   26 RELVEKLHGIGLGQHVNLPMIAVMGDTSSGKSSLLSALGGVEFPSSADLCTRCPTRLRMSHSDDPFAATVRIHWVAGGGAEAAPPSEVAG--FTDTMSDPAE-VTKAIAKAQETIMAEAARRGSRSGVAQDSIEVTVSGPAFDDLTLVDLPGIVRSTGDREDQSLIGDIQQLLETYLRNERCVVLVVIPANVDVHNNQVIQMCKEVDPEQRRTVPVVTKPDLIDEGAESQVQRLMRGEFKAFEQGYYMVKCRSQRDVNEGVSLERSLENEQRFFATRQPWRD 304          
BLAST of mRNA_D-dudresnayi_contig98.28607.1 vs. uniprot
Match: A0A7S4UNM1_GUITH (Hypothetical protein n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4UNM1_GUITH)

HSP 1 Score: 236 bits (603), Expect = 6.530e-69
Identity = 122/279 (43.73%), Postives = 174/279 (62.37%), Query Frame = 1
Query:   34 RRYIDFLREKGINNYVSLPEIAVMGDTSSGKSSLLSAITQIQLPSNDKITTRCPLRLRMEESDQVKAVIRIRWDSTLPEVSGTPWAEVKIDTWEGVDEHIASAQQAILDERAV--AVASDVVEVDVYGPSCLNLTVIDLPGIVRSVGKSESATLIEDIKKLTRSYLDNPRCVILAVHPANVDFHNSQIMHDAKEVDPATARTIPVITKPDQIDSGAEGNVHDLLLGKLMEFDMGFHMVKCRGQKDLNDGKTLQQGLEDEQTFFAKTAPWKDEPNSKLFG 864
            R++ +FL    +   + LP+IA +GDTSSGKSS+LSA++ +  PS   ITTRCP RL M+  +Q +  +++ W S  P     P  +  +     V   I   Q+++LD       V+  ++E+ + GP+  NLT+IDLPGIVRS G  ES  +I DI+ +   YL+N RC++LAVHPAN+D HN+++    KEVDP +ARTIPVITK D ++ G EGNV  L+ GK  +F +GF +VKCR Q +L+ G TL++ LE E  FF  T+PW       +FG
Sbjct:   14 RKFSEFLLAIDLAKDLDLPQIAALGDTSSGKSSVLSAMSSVVFPSRSDITTRCPTRLCMDTGEQFQCKMQVLWHSK-PASGSNPEVKKSVTQASDVTAAIEELQKSVLDHEKTESGVSKSIIEICLTGPNYPNLTLIDLPGIVRSTGDGESLEMIRDIQSVMEQYLNNKRCILLAVHPANIDRHNNEVFRLTKEVDPDSARTIPVITKIDLVEKGTEGNVMRLIQGKEAKFSLGFSVVKCRTQTELDQGVTLEKSLEQEMIFFRDTSPWNQMKQDNMFG 291          
BLAST of mRNA_D-dudresnayi_contig98.28607.1 vs. uniprot
Match: W2PE11_PHYPN (Dynamin-type G domain-containing protein (Fragment) n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PE11_PHYPN)

HSP 1 Score: 216 bits (551), Expect = 8.500e-66
Identity = 114/272 (41.91%), Postives = 175/272 (64.34%), Query Frame = 1
Query:   34 RRYIDFLREKGINNYVSLPEIAVMGDTSSGKSSLLSAITQIQLPSNDKITTRCPLRLRMEESDQVKAVIR-IRWDSTLPEVSGTPWAEVKIDTWEGVDEHIASAQQAILDERAVAVASDVVEVDVYGPSCLNLTVIDLPGIVRSVGKSESATLIEDIKKLTRSYLDNPRCVILAVHPANVDFHNSQIMHDAKEVDPATARTIPVITKPDQIDSGAEGNVHDLLLGKLMEFDMGFHMVKCRGQKDLNDGKTLQQGLEDEQTFFAKTAPWKDEP 846
            R+ +D LR+ G+  Y+ LP+IAVMGDTSSGKSSLLSA++ +  PSND++TTRCP +L +  +D  +  +R +R+ S+     G    E  ++  E V + I    Q ++DE    ++ D + +++ GP   NLT+ DLPG+VR+VG  E  ++I  ++++   Y+   R VI+AV PANVD HN++I+  A+E DP   RTI V+TK D +D+GAE  VH+LLL K  +  +G+H VKCR Q++L+ G ++++GL +E  FF +   W   P
Sbjct:   17 RKLVDKLRDIGLGQYIELPQIAVMGDTSSGKSSLLSALSGVSFPSNDQLTTRCPTQLILTRADTFRGTVRLVRFQSSSENDEGEEKQE--LNRLEDVPDAITKLTQKLVDEGQ-NISDDQIVIEMCGPELPNLTLTDLPGLVRTVGDREDQSIIPRVRQMVDRYMKQERTVIIAVVPANVDMHNTKILQAAQEADPNGTRTIAVVTKMDLVDTGAELAVHELLLNKKKKMRLGYHAVKCRNQRELSKGTSIEKGLANEIAFFGQHEYWNRLP 285          
BLAST of mRNA_D-dudresnayi_contig98.28607.1 vs. uniprot
Match: A0A3L6VRW8_9STRA (Uncharacterized protein (Fragment) n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VRW8_9STRA)

HSP 1 Score: 224 bits (572), Expect = 2.260e-64
Identity = 125/279 (44.80%), Postives = 174/279 (62.37%), Query Frame = 1
Query:    1 MSTIKQGDEVLRRYIDFLREKGINNYVSLPEIAVMGDTSSGKSSLLSAITQIQLPSNDKITTRCPLRLRMEESDQVKAVIRI-RWDSTLPEVSGTPWAEVKIDTWEGVDEHIASAQQAILDERAVAVASDVVEVDVYGPSCLNLTVIDLPGIVRSVGKSESATLIEDIKKLTRSYLDNPRCVILAVHPANVDFHNSQIMHDAKEVDPATARTIPVITKPDQIDSGAEGNVHDLLLGKLMEFDMGFHMVKCRGQKDLNDGKTLQQGLEDEQTFFAKTAPW 834
            M   K      R  ID LR  G++ Y+ LP+IAVMGDTSSGKSS+LSA++ I  PS+  +TTRCP +L + +S +    +R+ R+D  +  +  TP     I + + V  +I S  Q ++DE   +++ D +E+ ++GP   +LT+ DLPG+VRSVG  E   +I  + KL   YL   R VILAV PANVD HN+ I+  A+E DP   RTI +ITKPD ID GAE  V DLLL +     +G+H+VKCRGQK LN+ +++QQG ++E  FF   A W
Sbjct:   70 MLVAKSSQHETRHLIDQLRAVGLDKYIELPQIAVMGDTSSGKSSVLSALSGITFPSSGNLTTRCPTQLILTQSKKFSGTVRLLRFDPAVESLPPTP-----IHSIDEVTTYIESITQQLVDEGQ-SISDDAIEIKLHGPDFPDLTLTDLPGLVRSVGDHEDKAMISRVDKLVHRYLVQDRTVILAVVPANVDMHNTAIIQAAEEADPDGVRTISIITKPDLIDQGAEDAVVDLLLNRTKYRRLGYHVVKCRGQKALNNNESIQQGRDNESLFFDSHAVW 342          
BLAST of mRNA_D-dudresnayi_contig98.28607.1 vs. uniprot
Match: A0A225WUB7_9STRA (GTP-binding protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WUB7_9STRA)

HSP 1 Score: 224 bits (570), Expect = 2.990e-64
Identity = 115/278 (41.37%), Postives = 181/278 (65.11%), Query Frame = 1
Query:   34 RRYIDFLREKGINNYVSLPEIAVMGDTSSGKSSLLSAITQIQLPSNDKITTRCPLRLRMEESDQVKAVIR-IRWDSTLPEVSGTPWAEVKIDTWEGVDEHIASAQQAILDERAVAVASDVVEVDVYGPSCLNLTVIDLPGIVRSVGKSESATLIEDIKKLTRSYLDNPRCVILAVHPANVDFHNSQIMHDAKEVDPATARTIPVITKPDQIDSGAEGNVHDLLLGKLMEFDMGFHMVKCRGQKDLNDGKTLQQGLEDEQTFFAKTAPWKDEPNSKLFG 864
            R+ +D LR  G++ Y+ LP+IAVMGDTSSGKSSLLSA++ +  PS+D++TTRCP +L +  +D  +  +R +R+ S    V+     + ++   E V + I    Q ++DE    ++ D + +++ GP+  NLT+ DLPG+VR+VG  E  ++I  ++++   Y+   R VI+AV PANVD HN++I+  A+E DP   RTI V+TK D +D+GAE  VH+LLL +     +G+H VKCR Q++L  G ++++G+ +E TFF +   WK  P +KL+G
Sbjct:   15 RKLVDELRAIGLDKYIELPQIAVMGDTSSGKSSLLSALSGVSFPSSDQLTTRCPTQLILTSADTFRGTVRLVRFQSADAAVNDEGEEKEELKRLEDVPDAITKLTQKLIDEGQY-ISDDQIVIEMSGPNLPNLTLTDLPGLVRTVGDHEDQSIIPRVREMVNRYMQQERTVIIAVVPANVDMHNTEILQAAQEADPNGTRTIAVVTKVDLVDAGAESAVHELLLNRKKHMHLGYHAVKCRSQRELTKGTSIEKGIANEMTFFGQHEYWKRLP-AKLWG 290          
BLAST of mRNA_D-dudresnayi_contig98.28607.1 vs. uniprot
Match: W2VV73_PHYPR (Dynamin-type G domain-containing protein n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=W2VV73_PHYPR)

HSP 1 Score: 216 bits (550), Expect = 5.920e-64
Identity = 114/272 (41.91%), Postives = 174/272 (63.97%), Query Frame = 1
Query:   34 RRYIDFLREKGINNYVSLPEIAVMGDTSSGKSSLLSAITQIQLPSNDKITTRCPLRLRMEESDQVKAVIR-IRWDSTLPEVSGTPWAEVKIDTWEGVDEHIASAQQAILDERAVAVASDVVEVDVYGPSCLNLTVIDLPGIVRSVGKSESATLIEDIKKLTRSYLDNPRCVILAVHPANVDFHNSQIMHDAKEVDPATARTIPVITKPDQIDSGAEGNVHDLLLGKLMEFDMGFHMVKCRGQKDLNDGKTLQQGLEDEQTFFAKTAPWKDEP 846
            R+ +D LRE G+  Y+ LP+IAVMGDTSSGKSSLLSA++ +  PSND++TTRCP +L +  +D  +  +R +R+ S+     G    E  ++  E V + I    Q ++DE    ++ D + +++ GP   NLT+ DLPG+VR+VG  E  ++I  ++++   Y+   R VI+AV PANVD HN++I+  A+E DP   RTI V+TK D +D+GAE  VH+LLL    +  +G+H VKCR Q++L+ G ++++GL +E  FF +   W   P
Sbjct:   17 RKLVDKLREIGLGQYIELPQIAVMGDTSSGKSSLLSALSGVSFPSNDQLTTRCPTQLILTRADTFRGTVRLVRFQSSSENDEGEEKQE--LNRLEDVPDAITKLTQKLVDEGQ-NISDDQIVIEMCGPELPNLTLTDLPGLVRTVGDREDQSIIPRVRQMVDRYMKQERTVIIAVVPANVDMHNTEILQAAQEADPNGTRTIAVVTKMDLVDTGAELAVHELLLNNKKKMRLGYHAVKCRNQRELSKGMSIEKGLANEIAFFGQHEYWNRLP 285          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig98.28607.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3GUR9_9STRA1.140e-11162.95Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S0R8D1_9CHLO8.970e-10357.88Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
B7G6F7_PHATC4.920e-8152.29Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]
K0T0D5_THAOC1.840e-7947.06Dynamin-type G domain-containing protein n=1 Tax=T... [more]
A0A7S1LBJ9_NEODS1.730e-7048.58Hypothetical protein (Fragment) n=1 Tax=Neobodo de... [more]
A0A7S4UNM1_GUITH6.530e-6943.73Hypothetical protein n=3 Tax=Guillardia theta TaxI... [more]
W2PE11_PHYPN8.500e-6641.91Dynamin-type G domain-containing protein (Fragment... [more]
A0A3L6VRW8_9STRA2.260e-6444.80Uncharacterized protein (Fragment) n=4 Tax=Aphanom... [more]
A0A225WUB7_9STRA2.990e-6441.37GTP-binding protein n=1 Tax=Phytophthora megakarya... [more]
W2VV73_PHYPR5.920e-6441.91Dynamin-type G domain-containing protein n=2 Tax=P... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig98contigD-dudresnayi_contig98:52692..53638 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score260.4
Seed ortholog evalue1e-66
Seed eggNOG ortholog159749.K0T0D5
KEGG koko:K14754,ko:K20291
KEGG Pathwayko05162,ko05164,ko05165,map05162,map05164,map05165
EggNOG free text desc.Dynamin, GTPase
EggNOG OGs2XEQ0@2836,COG0699@1,KOG0446@2759
COG Functional cat.U
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Hectar predicted targeting categoryother localisation
Exons2
Model size864
Cds size864
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930937.1497483-CDS-D-dudresnayi_contig98:52691..534641622930937.1497483-CDS-D-dudresnayi_contig98:52691..53464Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig98 52692..53464 -
1690557972.2261727-CDS-D-dudresnayi_contig98:52691..534641690557972.2261727-CDS-D-dudresnayi_contig98:52691..53464Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig98 52692..53464 -
1622930937.1630912-CDS-D-dudresnayi_contig98:53547..536381622930937.1630912-CDS-D-dudresnayi_contig98:53547..53638Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig98 53548..53638 -
1690557972.2391748-CDS-D-dudresnayi_contig98:53547..536381690557972.2391748-CDS-D-dudresnayi_contig98:53547..53638Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig98 53548..53638 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig98.28607.1prot_D-dudresnayi_contig98.28607.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig98 52692..53638 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig98.28607.1

>prot_D-dudresnayi_contig98.28607.1 ID=prot_D-dudresnayi_contig98.28607.1|Name=mRNA_D-dudresnayi_contig98.28607.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=288bp
MSTIKQGDEVLRRYIDFLREKGINNYVSLPEIAVMGDTSSGKSSLLSAIT
QIQLPSNDKITTRCPLRLRMEESDQVKAVIRIRWDSTLPEVSGTPWAEVK
IDTWEGVDEHIASAQQAILDERAVAVASDVVEVDVYGPSCLNLTVIDLPG
IVRSVGKSESATLIEDIKKLTRSYLDNPRCVILAVHPANVDFHNSQIMHD
AKEVDPATARTIPVITKPDQIDSGAEGNVHDLLLGKLMEFDMGFHMVKCR
GQKDLNDGKTLQQGLEDEQTFFAKTAPWKDEPNSKLFG
back to top

mRNA from alignment at D-dudresnayi_contig98:52692..53638-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig98.28607.1 ID=mRNA_D-dudresnayi_contig98.28607.1|Name=mRNA_D-dudresnayi_contig98.28607.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=947bp|location=Sequence derived from alignment at D-dudresnayi_contig98:52692..53638- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGAGCACAATCAAGCAAGGTGATGAAGTACTTCGTAGATACATTGATTT CCTACGTGAAAAAGGAATCAATAACTATGTTTCTTTACCAGGTTAGTGCA TTTCACAATCTTCCATATGTTACTGTACAATAACTCTTACTAATACATAT TCATATAATTTCTTTCATTAATAGAAATCGCGGTAATGGGAGACACCAGT TCTGGTAAATCTTCCCTACTATCAGCCATTACCCAGATCCAGCTGCCGAG TAACGACAAGATCACCACCCGCTGTCCCCTTCGACTGAGAATGGAGGAGA GTGACCAGGTCAAAGCTGTCATCCGCATTCGCTGGGATAGCACTCTTCCT GAAGTTTCCGGTACTCCTTGGGCAGAGGTGAAGATAGATACCTGGGAGGG AGTGGACGAGCATATCGCTAGTGCGCAGCAAGCCATCCTGGACGAGAGAG CTGTGGCTGTGGCATCCGACGTAGTGGAAGTGGATGTGTATGGGCCTTCC TGTCTCAACCTCACAGTGATTGACCTGCCTGGAATCGTGAGATCTGTGGG AAAGTCCGAGTCGGCAACTCTGATCGAGGACATCAAGAAACTGACCAGGA GCTACCTGGACAACCCCCGCTGTGTGATCCTGGCCGTGCACCCCGCCAAT GTGGACTTCCACAACTCCCAGATCATGCACGACGCCAAGGAGGTAGACCC CGCCACTGCGCGCACCATCCCGGTGATCACCAAACCCGACCAGATCGACT CCGGCGCAGAGGGTAATGTTCATGATCTGTTACTGGGGAAGCTGATGGAG TTTGATATGGGCTTCCATATGGTGAAGTGTCGTGGCCAGAAAGATCTCAA CGATGGCAAGACTCTGCAGCAGGGTCTGGAGGACGAGCAGACTTTCTTCG CGAAGACAGCGCCTTGGAAGGATGAGCCTAACTCTAAGCTCTTCGGC
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig98:52692..53638-

>mRNA_D-dudresnayi_contig98.28607.1 ID=mRNA_D-dudresnayi_contig98.28607.1|Name=mRNA_D-dudresnayi_contig98.28607.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1728bp|location=Sequence derived from alignment at D-dudresnayi_contig98:52692..53638- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGAGCACAATCAAGCAAGGTGATGAAGTACTTCGTAGATACATTGATTT
CCTACGTGAAAAAGGAATCAATAACTATGTTTCTTTACCAGATGAGCACA
ATCAAGCAAGGTGATGAAGTACTTCGTAGATACATTGATTTCCTACGTGA
AAAAGGAATCAATAACTATGTTTCTTTACCAGAAATCGCGGTAATGGGAG
ACACCAGTTCTGGTAAATCTTCCCTACTATCAGCCATTACCCAGATCCAG
CTGCCGAGTAACGACAAGATCACCACCCGCTGTCCCCTTCGACTGAGAAT
GGAGGAGAGTGACCAGGTCAAAGCTGTCATCCGCATTCGCTGGGATAGCA
CTCTTCCTGAAGTTTCCGGTACTCCTTGGGCAGAGGTGAAGATAGATACC
TGGGAGGGAGTGGACGAGCATATCGCTAGTGCGCAGCAAGCCATCCTGGA
CGAGAGAGCTGTGGCTGTGGCATCCGACGTAGTGGAAGTGGATGTGTATG
GGCCTTCCTGTCTCAACCTCACAGTGATTGACCTGCCTGGAATCGTGAGA
TCTGTGGGAAAGTCCGAGTCGGCAACTCTGATCGAGGACATCAAGAAACT
GACCAGGAGCTACCTGGACAACCCCCGCTGTGTGATCCTGGCCGTGCACC
CCGCCAATGTGGACTTCCACAACTCCCAGATCATGCACGACGCCAAGGAG
GTAGACCCCGCCACTGCGCGCACCATCCCGGTGATCACCAAACCCGACCA
GATCGACTCCGGCGCAGAGGGTAATGTTCATGATCTGTTACTGGGGAAGC
TGATGGAGTTTGATATGGGCTTCCATATGGTGAAGTGTCGTGGCCAGAAA
GATCTCAACGATGGCAAGACTCTGCAGCAGGGTCTGGAGGACGAGCAGAC
TTTCTTCGCGAAGACAGCGCCTTGGAAGGATGAGCCTAACTCTAAGCTCT
TCGGCAAATCGCGGTAATGGGAGACACCAGTTCTGGTAAATCTTCCCTAC
TATCAGCCATTACCCAGATCCAGCTGCCGAGTAACGACAAGATCACCACC
CGCTGTCCCCTTCGACTGAGAATGGAGGAGAGTGACCAGGTCAAAGCTGT
CATCCGCATTCGCTGGGATAGCACTCTTCCTGAAGTTTCCGGTACTCCTT
GGGCAGAGGTGAAGATAGATACCTGGGAGGGAGTGGACGAGCATATCGCT
AGTGCGCAGCAAGCCATCCTGGACGAGAGAGCTGTGGCTGTGGCATCCGA
CGTAGTGGAAGTGGATGTGTATGGGCCTTCCTGTCTCAACCTCACAGTGA
TTGACCTGCCTGGAATCGTGAGATCTGTGGGAAAGTCCGAGTCGGCAACT
CTGATCGAGGACATCAAGAAACTGACCAGGAGCTACCTGGACAACCCCCG
CTGTGTGATCCTGGCCGTGCACCCCGCCAATGTGGACTTCCACAACTCCC
AGATCATGCACGACGCCAAGGAGGTAGACCCCGCCACTGCGCGCACCATC
CCGGTGATCACCAAACCCGACCAGATCGACTCCGGCGCAGAGGGTAATGT
TCATGATCTGTTACTGGGGAAGCTGATGGAGTTTGATATGGGCTTCCATA
TGGTGAAGTGTCGTGGCCAGAAAGATCTCAACGATGGCAAGACTCTGCAG
CAGGGTCTGGAGGACGAGCAGACTTTCTTCGCGAAGACAGCGCCTTGGAA
GGATGAGCCTAACTCTAAGCTCTTCGGC
back to top