mRNA_D-dudresnayi_contig978.28586.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig978.28586.1 vs. uniprot
Match: A0A6H5K3I1_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3I1_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 1.200e-14 Identity = 51/139 (36.69%), Postives = 71/139 (51.08%), Query Frame = 1 Query: 130 ALSGQSGCVRVDGRDVWVSDSGASMRMTNGRSRMYDCVVISPENASIITGDLTEYRVECCEKLDEIFHC-----EVDISITLVDVAFVPGLGYNLFSLHAVQMRETITLDSAGVHLLGGNLFFPRGKSGSHLIASRTEQ 531 ALS Q+ R GR+ + +DSGA+ + +M+D + I G+ T RV+C K++ FH E D + + DV VPG+ +NLFSLH Q ++ I LD GVHL G L F G L A+R Q Sbjct: 625 ALSAQNPLSRF-GREKFWADSGATNTFVSSSHQMFDLRPVPTGKEYIQVGNGTYLRVQCVGKVNMAFHMQDQGGERDFRVQMSDVYVVPGITFNLFSLHHTQRKQRIVLDETGVHLFDGRLSFAYSDVGCSLWATRLPQ 762
BLAST of mRNA_D-dudresnayi_contig978.28586.1 vs. uniprot
Match: A0A6H5JKY9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKY9_9PHAE) HSP 1 Score: 75.5 bits (184), Expect = 1.200e-12 Identity = 42/104 (40.38%), Postives = 52/104 (50.00%), Query Frame = 1 Query: 229 MYDCVVISPENASIITGDLTEYRVECCEKLDEIFHC------EVDISITLVDVAFVPGLGYNLFSLHAVQMRETITLDSAGVHLLGGNLFFPRGKSGSHLIASR 522 MY+ + P I G+ RVEC ++ FH EVD + L DV VPG+ +NLFSLH Q + I LD GVHL GG L F G L A+R Sbjct: 1 MYNISPVPPGKEYIRVGNGAHLRVECVGSVNLAFHMAGGRSREVDFCVQLTDVYVVPGISFNLFSLHQTQKKHRIMLDERGVHLFGGRLSFAYSDIGCSLSATR 104
BLAST of mRNA_D-dudresnayi_contig978.28586.1 vs. uniprot
Match: A0A6H5KCR3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR3_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 2.990e-12 Identity = 41/104 (39.42%), Postives = 52/104 (50.00%), Query Frame = 1 Query: 229 MYDCVVISPENASIITGDLTEYRVECCEKLDEIFHC------EVDISITLVDVAFVPGLGYNLFSLHAVQMRETITLDSAGVHLLGGNLFFPRGKSGSHLIASR 522 MY+ + P I G+ RVEC ++ FH EVD + L DV VPG+ +NL+SLH Q I LD GVHL GG L F G +L A+R Sbjct: 1 MYNISPVPPGKEYIRVGNGAHLRVECVGSVNLAFHMAGGRSGEVDFCVQLTDVYVVPGISFNLYSLHQTQKTHRIMLDERGVHLFGGRLSFAYSDIGCYLSATR 104
BLAST of mRNA_D-dudresnayi_contig978.28586.1 vs. uniprot
Match: A0A6H5JCK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK7_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 7.550e-12 Identity = 43/127 (33.86%), Postives = 63/127 (49.61%), Query Frame = 1 Query: 166 GRDVWVSDSGASMRMTNGRSRMYDCVVISPENASIITGDLTEYRVECCEKLDEIFHC-----EVDISITLVDVAFVPGLGYNLFSLHAVQMRETITLDSAGVHLLGGNLFFPRGKSGSHLIASRTEQ 531 GR+ + +DSGA+ + +M+D + I G+ RV+C ++ FH E D + + DV VPG+ +NLFSLH +Q ++ I LD GVHL G F G L A+R Q Sbjct: 334 GRENFWADSGATNTFVSSSHQMFDLRPVPTGKEYIQVGNGAYLRVQCLGTVNMAFHMQDQGGERDFCVQMSDVYVVPGITFNLFSLHHMQRKQRIVLDETGVHLFDGKRSFAYSDVGCSLWATRLPQ 460
BLAST of mRNA_D-dudresnayi_contig978.28586.1 vs. uniprot
Match: A0A6H5JU31_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU31_9PHAE) HSP 1 Score: 68.9 bits (167), Expect = 2.180e-10 Identity = 39/106 (36.79%), Postives = 53/106 (50.00%), Query Frame = 1 Query: 229 MYDCVVISPENASIITGDLTEYRVECCEKLDEIFHC-----EVDISITLVDVAFVPGLGYNLFSLHAVQMRETITLDSAGVHLLGGNLFFPRGKSGSHLIASRTEQ 531 M+D + I G+ RV+C K++ FH E+D + + DV VPG+ +NLFSLH Q ++ I LD GVHL G L F G L A+R Q Sbjct: 1 MFDLRPVPTGKEYIQVGNGAYLRVQCVGKVNMAFHMQDQGGELDFCVQMSDVYVVPGITFNLFSLHHTQRKQRIVLDETGVHLFDGRLSFAYSDVGCSLWATRLPQ 106
BLAST of mRNA_D-dudresnayi_contig978.28586.1 vs. uniprot
Match: A0A6H5JW31_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW31_9PHAE) HSP 1 Score: 68.2 bits (165), Expect = 3.190e-10 Identity = 40/103 (38.83%), Postives = 50/103 (48.54%), Query Frame = 1 Query: 229 MYDCVVISPENASIITGDLTEYRVECCEKLDEIFHC-----EVDISITLVDVAFVPGLGYNLFSLHAVQMRETITLDSAGVHLLGGNLFFPRGKSGSHLIASR 522 M+D I I G+ RV+C + FH E D + + DV VPG+ +NLFSLH Q R+ ITLD GVHL G L F G L A+R Sbjct: 1 MFDMKPIPAGREFIQVGNSAYLRVQCVGSNNMTFHMPDPSGEADFCVQISDVYVVPGITFNLFSLHHTQRRQRITLDDNGVHLFNGQLSFAYSDVGCSLWATR 103
BLAST of mRNA_D-dudresnayi_contig978.28586.1 vs. uniprot
Match: A0A6H5JX85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX85_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 5.040e-10 Identity = 38/106 (35.85%), Postives = 53/106 (50.00%), Query Frame = 1 Query: 229 MYDCVVISPENASIITGDLTEYRVECCEKLDEIFHC-----EVDISITLVDVAFVPGLGYNLFSLHAVQMRETITLDSAGVHLLGGNLFFPRGKSGSHLIASRTEQ 531 M+D + I G+ RV+C ++ FH E D+ + + DV VPG+ +NLFSLH Q ++ I LD GVHL G +FF G L A+R Q Sbjct: 1 MFDLRPVPTGKEYIQVGNGACLRVQCLGTVNMAFHMQDQGGERDVCVQMSDVYVVPGITFNLFSLHHTQRKQRIVLDETGVHLFDGKIFFAYSDVGCSLWATRLPQ 106
BLAST of mRNA_D-dudresnayi_contig978.28586.1 vs. uniprot
Match: A0A6H5KBB5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBB5_9PHAE) HSP 1 Score: 66.6 bits (161), Expect = 1.350e-9 Identity = 43/125 (34.40%), Postives = 58/125 (46.40%), Query Frame = 1 Query: 166 GRDVWVSDSGASMRMTNGRSRMYDCVVISPENASIITGDLTEYRVECCEKLDEIFHCEVD------ISITLVDVAFVPGLGYNLFSLHAVQMRETITLDSAGVHLLGGNLFFPRGKSGSHLIASR 522 G + WV+DSGAS TN MYD I ++ GD V+ + F E + + + L DV+ V L +NLFS HAV +++ I D G L G LFF R + S A R Sbjct: 262 GSERWVADSGASNSFTNSSLHMYDLQEIPASRKYVVVGDGRLLEVQAIGSIILSFFQEDENGEETTMCVKLTDVSVVESLSFNLFSTHAVSLKQPILYDERGAALQNG-LFFAREEKASAAYAMR 385
BLAST of mRNA_D-dudresnayi_contig978.28586.1 vs. uniprot
Match: A0A6H5KNR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNR6_9PHAE) HSP 1 Score: 65.5 bits (158), Expect = 1.370e-9 Identity = 37/106 (34.91%), Postives = 52/106 (49.06%), Query Frame = 1 Query: 229 MYDCVVISPENASIITGDLTEYRVECCEKLDEIFHC-----EVDISITLVDVAFVPGLGYNLFSLHAVQMRETITLDSAGVHLLGGNLFFPRGKSGSHLIASRTEQ 531 M+D + I G+ V+C ++ FH E D + + DV VPG+ +NLFSLH +Q ++ I LD GVHL G +FF G L A+R Q Sbjct: 1 MFDSRPVPTSKEYIQVGNGAYLCVQCLGTVNMAFHMQDQGGERDFCVQMSDVYVVPGITFNLFSLHHMQRKQRIVLDETGVHLFDGKIFFAYSDVGCSLWATRLPQ 106
BLAST of mRNA_D-dudresnayi_contig978.28586.1 vs. uniprot
Match: A0A6H5JPK8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK8_9PHAE) HSP 1 Score: 65.9 bits (159), Expect = 2.510e-9 Identity = 42/125 (33.60%), Postives = 58/125 (46.40%), Query Frame = 1 Query: 166 GRDVWVSDSGASMRMTNGRSRMYDCVVISPENASIITGDLTEYRVECCEKLDEIFHCEVD------ISITLVDVAFVPGLGYNLFSLHAVQMRETITLDSAGVHLLGGNLFFPRGKSGSHLIASR 522 G + WV+DSGAS TN MYD I ++ GD V+ ++ F E + + + L DV+ V L +NLFS HAV +++ I D G L G L F R + S A R Sbjct: 353 GSERWVADSGASNSFTNSSLHMYDLQEIPASRKYVVVGDGRLLEVQAIGSINLSFFQEDENGEKTTMCVKLTDVSVVESLSFNLFSTHAVSLKQPILYDERGATLQNG-LLFAREEKASAAYAMR 476 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig978.28586.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig978.28586.1 >prot_D-dudresnayi_contig978.28586.1 ID=prot_D-dudresnayi_contig978.28586.1|Name=mRNA_D-dudresnayi_contig978.28586.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=177bp FNPPPPSSIGPSAGQVDSSSTAYSSAYPYNQALTTRIAPTGMVALSGQSGback to top mRNA from alignment at D-dudresnayi_contig978:23187..23719+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig978.28586.1 ID=mRNA_D-dudresnayi_contig978.28586.1|Name=mRNA_D-dudresnayi_contig978.28586.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=533bp|location=Sequence derived from alignment at D-dudresnayi_contig978:23187..23719+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig978:23187..23719+ >mRNA_D-dudresnayi_contig978.28586.1 ID=mRNA_D-dudresnayi_contig978.28586.1|Name=mRNA_D-dudresnayi_contig978.28586.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1062bp|location=Sequence derived from alignment at D-dudresnayi_contig978:23187..23719+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |