mRNA_D-dudresnayi_contig9778.28582.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9778.28582.1
Unique NamemRNA_D-dudresnayi_contig9778.28582.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9778.28582.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9778contigD-dudresnayi_contig9778:234..930 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size697
Cds size360
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9778.28582.1prot_D-dudresnayi_contig9778.28582.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9778 352..711 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930934.5486186-UTR-D-dudresnayi_contig9778:233..3511622930934.5486186-UTR-D-dudresnayi_contig9778:233..351Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9778 234..351 +
1690557971.0522125-UTR-D-dudresnayi_contig9778:233..3511690557971.0522125-UTR-D-dudresnayi_contig9778:233..351Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9778 234..351 +
1622930934.577897-UTR-D-dudresnayi_contig9778:711..9301622930934.577897-UTR-D-dudresnayi_contig9778:711..930Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9778 712..930 +
1690557971.0868876-UTR-D-dudresnayi_contig9778:711..9301690557971.0868876-UTR-D-dudresnayi_contig9778:711..930Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9778 712..930 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930934.565154-CDS-D-dudresnayi_contig9778:351..7111622930934.565154-CDS-D-dudresnayi_contig9778:351..711Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9778 352..711 +
1690557971.072556-CDS-D-dudresnayi_contig9778:351..7111690557971.072556-CDS-D-dudresnayi_contig9778:351..711Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9778 352..711 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9778.28582.1

>prot_D-dudresnayi_contig9778.28582.1 ID=prot_D-dudresnayi_contig9778.28582.1|Name=mRNA_D-dudresnayi_contig9778.28582.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=120bp
MYVVPTGTYLAFSMLTGFDISRAGGLLSNSAYLHSRALALSATRRRDKRV
QFFCESNTQAYANTGTCSNHYEYAARQYNMRHLKLRVAIYYTICFPIQTV
HFKSGFVFTTRCNEYKIYM*
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mRNA from alignment at D-dudresnayi_contig9778:234..930+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9778.28582.1 ID=mRNA_D-dudresnayi_contig9778.28582.1|Name=mRNA_D-dudresnayi_contig9778.28582.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=697bp|location=Sequence derived from alignment at D-dudresnayi_contig9778:234..930+ (Desmarestia dudresnayi DdudBR16 monoicous)
TGTATATCAGTCTATATAGCAATACAATTTACGCATTGTTTTTTGTCCAT
CCTTTACCTTCCGATTCCGGGGCACAGCAGTTCATCGCTCAGCTCGCCTG
TGTTACCAAGTCGTGATCATGTACGTTGTCCCCACCGGTACTTACCTTGC
GTTTTCAATGCTCACAGGGTTCGACATTTCCAGAGCTGGTGGACTTTTAT
CGAACTCCGCTTACTTGCACTCTCGCGCTCTTGCGCTTTCCGCAACTAGA
AGACGAGACAAAAGGGTGCAATTTTTCTGCGAATCGAACACCCAAGCTTA
CGCCAACACGGGGACGTGTTCTAACCACTACGAGTACGCCGCACGTCAAT
ACAATATGCGTCATTTAAAGTTGCGTGTTGCTATATATTACACGATATGC
TTCCCCATCCAAACCGTGCACTTCAAAAGCGGATTCGTGTTCACAACAAG
GTGCAATGAGTACAAGATATATATGTAGGCATACATACGGGAGGGAAACA
TTATGTCTTTGTGAAGTTGGGGTACACGACTGCCTCGATGATTTATAGCT
AATAGCTCTATGTCCAAACACCTTCATTAAATAGCTGCACGGTCCGTGGT
AGTACGGTTATATTTTCCATAGAGCTCTGTATTGCCTATAGATAGGCGAT
TGCTTATAGCGCACGGATGAGAATGCATACGTGCGCTTGTCTCCAAT
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9778:234..930+

>mRNA_D-dudresnayi_contig9778.28582.1 ID=mRNA_D-dudresnayi_contig9778.28582.1|Name=mRNA_D-dudresnayi_contig9778.28582.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=720bp|location=Sequence derived from alignment at D-dudresnayi_contig9778:234..930+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGTACGTTGTCCCCACCGGTACTTACCTTGCGTTTTCAATGCTCACAGG
GTTCGACATTTCCAGAGCTGGTGGACTTTTATCGAACTCCGCTTACTTGC
ACTCTCGCGCTCTTGCGCTTTCCGCAACTAGAAGACGAGACAAAAGGGTG
CAATTTTTCTGCGAATCGAACACCCAAGCTTACGCCAACACGGGGACGTG
TTCTAACCACTACGAGTACGCCGCACGTCAATACAATATGCGTCATTTAA
AGTTGCGTGTTGCTATATATTACACGATATGCTTCCCCATCCAAACCGTG
CACTTCAAAAGCGGATTCGTGTTCACAACAAGGTGCAATGAGTACAAGAT
ATATATGTAGATGTACGTTGTCCCCACCGGTACTTACCTTGCGTTTTCAA
TGCTCACAGGGTTCGACATTTCCAGAGCTGGTGGACTTTTATCGAACTCC
GCTTACTTGCACTCTCGCGCTCTTGCGCTTTCCGCAACTAGAAGACGAGA
CAAAAGGGTGCAATTTTTCTGCGAATCGAACACCCAAGCTTACGCCAACA
CGGGGACGTGTTCTAACCACTACGAGTACGCCGCACGTCAATACAATATG
CGTCATTTAAAGTTGCGTGTTGCTATATATTACACGATATGCTTCCCCAT
CCAAACCGTGCACTTCAAAAGCGGATTCGTGTTCACAACAAGGTGCAATG
AGTACAAGATATATATGTAG
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