mRNA_D-dudresnayi_contig971.28483.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig971.28483.1
Unique NamemRNA_D-dudresnayi_contig971.28483.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
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BLAST of mRNA_D-dudresnayi_contig971.28483.1 vs. uniprot
Match: D7FUP7_ECTSI (DNA topoisomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP7_ECTSI)

HSP 1 Score: 326 bits (835), Expect = 3.840e-104
Identity = 152/208 (73.08%), Postives = 163/208 (78.37%), Query Frame = 1 
Query:    4 FSKCGVCDSQMDLKKTSAGRPLLFCGTCAKGFPLPHKGKLTKQDPPFGCPLCKFQ-------VLSVGPGNDYTGSGYTVCPHCFNNPPTGHGGEGQSNFRCFMCSASCPLARRIQGGDTPIARCRKPGCGQALNIKRTRAGAYHLGCKAYPQCSGSTVWLPKCATSVAVTEETCPRCSGPGAEDAVRRLDFTFRFQRNQVAPGTPTSR 606
            FS+CGVC + MDLKK+S+GRPLLF      GFPLPHKGKLTKQDP F CPLC FQ       VLSV  GNDYTGSGYTVCP+CFNN P  HGGEGQS FRCFMCSASCPLA+R+QGGDT I RC K GCGQALNIKRTR G YHLGCK YP CS STVWLPK AT+V+VTEETC RCSGP A DAVRRLDFTF+FQR   +  T   R
Sbjct:  439 FSRCGVCGTAMDLKKSSSGRPLLFXXXXXTGFPLPHKGKLTKQDPEFECPLCHFQARFLHVLVLSVSTGNDYTGSGYTVCPYCFNNAPAAHGGEGQSQFRCFMCSASCPLAKRVQGGDTTIVRCWKAGCGQALNIKRTRTGKYHLGCKGYPACSESTVWLPKNATNVSVTEETCARCSGPTAADAVRRLDFTFKFQRPWFSARTAKGR 646
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BLAST of mRNA_D-dudresnayi_contig971.28483.1 vs. uniprot
Match: A0A835YM61_9STRA (DNA topoisomerase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM61_9STRA)

HSP 1 Score: 178 bits (451), Expect = 3.240e-48
Identity = 92/215 (42.79%), Postives = 115/215 (53.49%), Query Frame = 1 
Query:    4 FSKCGVCDSQMDLKKTSAG---------RPLLFCGTCAKGFPLPHKGKLTKQDPPFGCPLCKFQVLSVGPGNDYTGSGYTVCPHCFNNPPTGHGGEGQSNFRCFMCSASCPLARRIQGGDTPIARCRKPGCGQALNIKRTRAGAYH-----------------LGCKAYPQCSGSTVWLPKCATSVAVTEE--TCPRCSGPGAEDAVRRLDFTFR 564
            F+ CG C ++MDL+ T AG         RPLL+C TC +G PLPH+G++    P   CPLC ++VL V PGN + G+ YT+CP C+NNPP  HGG G   F CF+CSA CPLA++     TPIA C   GCG +L+I+                         L C  YP C G+ VWLP+   S    E   TC RC GP     VRRL  T R
Sbjct:  450 FAACGNCGTRMDLRVTDAGXXXXXXXXARPLLYCTTCRRGLPLPHRGEIALATPGVACPLCAYEVLEVRPGNGFEGNAYTICPWCYNNPPEEHGGAGVGTFPCFLCSADCPLAKKTGSDATPIAPCPL-GCGNSLSIRSAXXXXXXXXXXXXXXXXXXXXXXSLSCSGYPACRGA-VWLPRVVASARPAESGATCARC-GPN----VRRLTLTLR 657
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BLAST of mRNA_D-dudresnayi_contig971.28483.1 vs. uniprot
Match: A0A7S2A3P8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A3P8_9STRA)

HSP 1 Score: 145 bits (365), Expect = 3.240e-38
Identity = 91/263 (34.60%), Postives = 131/263 (49.81%), Query Frame = 1 
Query:    1 DFSKCGVCDSQMDLKKTSAG---------------------RPLLFCGTCAKGFPLPHKGKLTKQDP-----PFGCPLCKFQVLSVGPGNDYTGSGYTVCPHCFNNPPTGHGGEGQSNFRCFMCS-ASCPLARRIQGGDTPIARCR--KPGCGQA--LNIKRTRAGAYHLGCKAYPQCSGST--VWLPKCATSVAVT-------EET-----------CPRCSGPGAEDAVRRLDFTFRFQRNQVAPGTPTSRIACPFCDSLI 636
            +FS+CGVC S+M LK+ + G                     R +LFC TC+ G PLP        DP     PF CP+C +QV+ +  G  YTG+GY VCP CF++PP+ HGG    +F+CF+C+ A+C LA   +GGD  +  C   + G G+A  +N+++T  G Y L C A    +  T  +WLPK + SV+V        E+T           C RCS    +  VR+L F ++     V P      + C  CD ++
Sbjct:   39 NFSECGVCQSRMTLKQLTPGDHNAGNNQRRGNQSNRGGVVRRKILFCSTCSLGLPLPRGELSPMADPQAANRPFLCPICNYQVIKISRGEGYTGNGYQVCPKCFSDPPSEHGGSLAGDFQCFVCTHATCSLAGGTRGGDVEVYPCPYCQAGGGEAGKVNLRKTSRG-YVLSCNATTAGARCTYALWLPKESRSVSVGTDPNSTGEQTEGGGQEEMASLCRRCSS--GDKTVRKLKFVWK--PGSVPPHYGREYVGCVLCDDML 296
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BLAST of mRNA_D-dudresnayi_contig971.28483.1 vs. uniprot
Match: A0A7S2S3K4_9STRA (DNA topoisomerase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3K4_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.080e-33
Identity = 70/161 (43.48%), Postives = 94/161 (58.39%), Query Frame = 1 
Query:    4 FSKCGVCDSQMDLKK----TSAGRPLLFCGTCAKGFPLPHKGKLTKQDPPFGCPLCKFQVLSVGPGNDYTGSGYTVCPHCFNNPP-----TGHGGEGQSNFRCFMCS-ASCPLARRIQGGDTPIARCRKPGCG-QALNIKRTR-AGAYHLGCKAY---PQC 441
             S+CG C+S MDLK+     +AG   LFC +CA+  PLP KG  +  D    C +C +Q + VGPGN Y G+GYT+CPHCF NPP     T  GG+    F CF CS A CPLA++I GGDTP+  CR   C  + + +K+ +   ++   C  Y   P+C
Sbjct:   92 LSRCGACNSMMDLKRDGDQNTAGF-FLFCSSCARALPLPRKGIFSAHDE--SCRICGYQAIQVGPGNGYNGNGYTLCPHCFKNPPPEAAETETGGD----FPCFKCSKAGCPLAKKIIGGDTPLFTCR--ACRKEGMELKKMKDKDSFFASCAGYRSTPKC 243
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BLAST of mRNA_D-dudresnayi_contig971.28483.1 vs. uniprot
Match: A0A7S0G8W9_9STRA (DNA topoisomerase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G8W9_9STRA)

HSP 1 Score: 134 bits (338), Expect = 4.280e-33
Identity = 91/251 (36.25%), Postives = 119/251 (47.41%), Query Frame = 1 
Query:    4 FSKCGVCDSQMDLK---------KTSAGRPLLFCGTCAKGFPLPHKGKLTK----QD-PPFGCPLCKFQVLSVGPGNDYTGSGYTVCPHCFNNPPTGHGGEGQSN--FRCFMC-SASCPLARRIQGGDTPIARCRKPGC---GQALNIKRTRAGAYHLGCKAY---PQCSGSTVWLPKCATSVAVTEET------------CPRCSGPGAE-----DAVRRLDFTFRFQRNQVAPGTPTSRIACPFCDSLI 636
            FSKCG C++ M LK         +    R +LFC TCA+G+P+P +G L      QD  PF CP+CKFQVL +  G  Y G+GYTVCP CF++ P  H      N  FRCF C   +C LA   +GG   I  C  P C   G  + ++++  G Y L C +     +C    VWLPK A  V V EE             CP CS    +       VR+L F ++     V P      I C  CD ++
Sbjct:  274 FSKCGQCENLMTLKEMQDDNVQNRVRVKRKVLFCSTCAEGYPVP-RGDLAPYFNGQDREPFSCPICKFQVLKISRGEGYDGNGYTVCPKCFSDAPRDHSPRSTDNVDFRCFSCLHQTCGLAGGTRGGHIDIYPC--PFCDSEGTNVTLRKSSRG-YMLTCSSSGGAERCQ-YVVWLPKAAREVTVCEEDENDPVNTSSNARCPNCSSTNDDRRTNNKIVRKLKFCWK--PGSVPPHLGREYIGCVLCDDML 517
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BLAST of mRNA_D-dudresnayi_contig971.28483.1 vs. uniprot
Match: B7G3B1_PHATC (DNA topoisomerase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G3B1_PHATC)

HSP 1 Score: 135 bits (340), Expect = 5.900e-33
Identity = 87/248 (35.08%), Postives = 121/248 (48.79%), Query Frame = 1 
Query:    4 FSKCGVCDSQMDLK-----------KTSAGRPLLFCGTCAKGFPLPH---KGKLTKQD--PPFGCPLCKFQVLSVGPGNDYTGSGYTVCPHCFNNPPTGHGGEGQS-NFRCFMCS-ASCPLARRIQGGDTPIARCRKPGCGQALN-----------IKRTRAGAYHLGCKAY----PQCSGSTVWLPKCATSVAVTE------ETCPRCSGPGAEDAVRRLDFTFRFQRNQVAPGTPTSRIACPFCDS 630
            FS+CGVC + M LK           + +  R LL+C TC  G+ LP    + K  ++D  PP  CP+C+FQV+ +  G  Y G+GY VCP CF++PP+ HGG   + +FRCF C   +C LA    GGD  + RC  P C  +             +++T  G Y L C  Y     +CS  T+WLPK    V+V        E C RCS P A   +R++ F ++     V P        C  CD+
Sbjct:  708 FSECGVCRNSMALKQERENNNRTTARNTVRRKLLYCSTCRAGWTLPRGVVRPKTEQEDNGPPVKCPICQFQVIRILRGEGYEGNGYHVCPKCFSDPPSDHGGASNAGDFRCFACQHPTCALASGTPGGDVEVFRC--PFCHPSAQPTSTSDSGKVCVRKTSRG-YVLSCNKYVRGQDRCS-YTIWLPKECHKVSVLSGDENQNEICGRCSSPRA--VIRKVHFVWK--PGSVPPHLGRECTVCVLCDA 947
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BLAST of mRNA_D-dudresnayi_contig971.28483.1 vs. uniprot
Match: A0A0N1PAL1_LEPSE (DNA topoisomerase n=1 Tax=Leptomonas seymouri TaxID=5684 RepID=A0A0N1PAL1_LEPSE)

HSP 1 Score: 114 bits (285), Expect = 1.320e-25
Identity = 73/222 (32.88%), Postives = 102/222 (45.95%), Query Frame = 1 
Query:   13 CGVCDSQMDLKKTSAGRP----LLFCGTCAKGFPLPH--KGKLTKQDPPFGCPLCKFQVLSVGPGNDYTGSGYTVCPHCFNNPPTGHGGEGQ-------SNFRCFMCSASCPLARRIQG-GDTPIARCRKPGCGQALNIKRTRAGAYHLGCKAYPQCSGSTVWLPKCATSVAVTEETCPRCSGPGAEDAVRRLDFTFRFQRNQVAPGTPTSRIACPFCDSLI 636
            CG+C S MDL +    R      + CG C+K + +P+    KL    PP  CPLC F+VL V   N    + +T+CP+CF++PP      G          FRCF C+A CPLA+ ++  G TP   CR+      L ++ +  G Y L CK YP C+   V LP   +      + CP C+          +   F F+  Q  PG       C  CD+ I
Sbjct:  637 CGMCGSLMDLVEHQGERDREVWAVRCGRCSKSYRVPNCRLNKLEPLTPPQRCPLCGFEVLRVT--NREKQTSHTICPYCFSHPPASASVNGMLPDMETAGEFRCFQCTADCPLAKGLESIGITPCIACRQ----NELRLRASSCG-YFLSCKGYPTCN-LIVSLPTATSVKPCPTQRCPSCNA---------VLLIFDFRGVQGVPGLSPVDTICVSCDARI 841
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BLAST of mRNA_D-dudresnayi_contig971.28483.1 vs. uniprot
Match: W6LFU2_9TRYP (DNA topoisomerase n=1 Tax=Phytomonas sp. isolate Hart1 TaxID=134013 RepID=W6LFU2_9TRYP)

HSP 1 Score: 109 bits (272), Expect = 7.110e-24
Identity = 73/214 (34.11%), Postives = 97/214 (45.33%), Query Frame = 1 
Query:    1 DFSKCGVCDSQMDLKKTSAGRPL---LFCGTCAKGFPLPHKGKLTKQDP-PFGCPLCKFQVLSVGPGNDYTGSGYTVCPHCFNNPPTGHGGEGQSNFRCFMCSAS-CPLARRIQGGDTPIARCRKPGCGQALNIKRTRAGAYHLGCKAYPQCSGSTVWLPKCATSVAVTEETCPRCSGPGAEDAVRRLDFTFRFQRNQVAPGTPTSRIACPFCD 627
            +F  CGVC   M+L + + G      L C  C + + +P+ G L + +P    C LC F  + V   N    + YT+CPHCF NPP     E    FRCF C+ S CPLA+ ++     I RC+   C +     R+ A  Y+L CK YP CS S V LPK         + CP C         + +  TF F    V PG       C  CD
Sbjct:  624 EFMSCGVCHRAMELVENADGDRSSWHLRCLQCERQYRMPN-GALNRLEPLSQRCALCSFHAVQVT--NREKNTSYTICPHCFTNPPPEM--ESLGEFRCFQCTVSNCPLAKGLE--QLAITRCQS--CKENDLRLRSNATGYYLSCKGYPTCSFS-VGLPKANAITPNPTQRCPTC---------QTMMLTFDFGAMPVVPGMDMVDTVCLTCD 818
[Close]
BLAST of mRNA_D-dudresnayi_contig971.28483.1 vs. uniprot
Match: A0A7S2S3L3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3L3_9STRA)

HSP 1 Score: 100 bits (250), Expect = 8.170e-24
Identity = 54/126 (42.86%), Postives = 72/126 (57.14%), Query Frame = 1 
Query:   97 FPLPHKGKLTKQDPPFGCPLCKFQVLSVGPGNDYTGSGYTVCPHCFNNPP-----TGHGGEGQSNFRCFMCS-ASCPLARRIQGGDTPIARCRKPGCG-QALNIKRTR-AGAYHLGCKAY---PQC 441
             PLP KG  +  D    C +C +Q + VGPGN Y G+GYT+CPHCF NPP     T  GG+    F CF CS A CPLA++I GGDTP+  CR   C  + + +K+ +   ++   C  Y   P+C
Sbjct:    1 MPLPQKGIFSAHDE--SCRICGYQAIQVGPGNGYNGNGYTLCPHCFKNPPPEAAETETGGD----FPCFKCSKAGCPLAKKIIGGDTPLFTCR--ACRKEGMELKKMKDKDSFFASCAGYRSTPKC 118
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BLAST of mRNA_D-dudresnayi_contig971.28483.1 vs. uniprot
Match: A0A7G2BZ95_9TRYP (DNA topoisomerase n=1 Tax=Angomonas deanei TaxID=59799 RepID=A0A7G2BZ95_9TRYP)

HSP 1 Score: 107 bits (266), Expect = 1.930e-23
Identity = 72/213 (33.80%), Postives = 91/213 (42.72%), Query Frame = 1 
Query:   13 CGVCDSQMDLKK---TSAGRPLLF--CGTCAKGFPLP--HKGKLTKQDPPFGCPLCKFQVLSVGPGNDYTGSGYTVCPHCFNNPPTGHGGEGQSNFRCFMCSASCPLARRIQG-GDTPIARCRKPGCGQALNIKRTRAGAYHLGCKAYPQCSGSTVWLPKCATSVAVTEETCPRCSGPGAEDAVRRLDFTFRFQRNQVAPGTPTSRIACPFCD 627
            CG C   M+L K   T  GR   +  C  CA+   +P  H   L    P   C LC F  L V   N    + YTVCP+CF +PP G   E    FRCF C+A CPLA  ++  G      C+    G  L ++    G Y L CK +P+C G TV LP  ++        CP C           +  TF F+  Q  PG       C  CD
Sbjct:  178 CGKCGGSMNLIKRTETGGGRESSYVHCNQCAEQCRVPGGHNSDLELLQPQQKCALCPFFALRVT--NREKRTSYTVCPYCFTHPPHGPDIEAVGEFRCFQCTADCPLASGLENVGIVSCVSCQ----GNELRLRNGPTGPY-LSCKGWPEC-GVTVTLPTASSVKPCPGRRCPTCQA---------VLLTFDFRGVQGVPGMEQEETVCISCD 373
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig971.28483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUP7_ECTSI3.840e-10473.08DNA topoisomerase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835YM61_9STRA3.240e-4842.79DNA topoisomerase (Fragment) n=1 Tax=Tribonema min... [more]
A0A7S2A3P8_9STRA3.240e-3834.60Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2S3K4_9STRA1.080e-3343.48DNA topoisomerase (Fragment) n=1 Tax=Rhizochromuli... [more]
A0A7S0G8W9_9STRA4.280e-3336.25DNA topoisomerase n=1 Tax=Proboscia inermis TaxID=... [more]
B7G3B1_PHATC5.900e-3335.08DNA topoisomerase n=2 Tax=Phaeodactylum tricornutu... [more]
A0A0N1PAL1_LEPSE1.320e-2532.88DNA topoisomerase n=1 Tax=Leptomonas seymouri TaxI... [more]
W6LFU2_9TRYP7.110e-2434.11DNA topoisomerase n=1 Tax=Phytomonas sp. isolate H... [more]
A0A7S2S3L3_9STRA8.170e-2442.86Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7G2BZ95_9TRYP1.930e-2333.80DNA topoisomerase n=1 Tax=Angomonas deanei TaxID=5... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig971contigD-dudresnayi_contig971:320..6531 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score323.9
Seed ortholog evalue5.6e-86
Seed eggNOG ortholog2880.D7FUP7
Preferred nameTOP3A
KEGG koko:K03165
KEGG Pathwayko03440,ko03460,map03440,map03460
KEGG ModuleM00414
GOsGO:0000003,GO:0000278,GO:0000280,GO:0000712,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003917,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006259,GO:0006260,GO:0006265,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007127,GO:0007131,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016604,GO:0016605,GO:0016853,GO:0022402,GO:0022414,GO:0031974,GO:0031981,GO:0033554,GO:0034641,GO:0034645,GO:0035825,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045132,GO:0046483,GO:0048285,GO:0050896,GO:0051276,GO:0051304,GO:0051307,GO:0051321,GO:0051716,GO:0061982,GO:0070013,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0098813,GO:0140013,GO:0140097,GO:1901360,GO:1901363,GO:1901576,GO:1903046
EggNOG free text desc.DNA topoisomerase type I activity
EggNOG OGsCOG0550@1,KOG1956@2759
EC5.99.1.2
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionputative DNA topoisomerase III
Ec32 orthologEc-03_001530.1
Exons6
Model size660
Cds size657
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig971.28483.1prot_D-dudresnayi_contig971.28483.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig971 320..6530 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930922.6856744-CDS-D-dudresnayi_contig971:319..3811622930922.6856744-CDS-D-dudresnayi_contig971:319..381Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig971 320..381 +
1690557966.7378445-CDS-D-dudresnayi_contig971:319..3811690557966.7378445-CDS-D-dudresnayi_contig971:319..381Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig971 320..381 +
1622930922.7042367-CDS-D-dudresnayi_contig971:792..8981622930922.7042367-CDS-D-dudresnayi_contig971:792..898Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig971 793..898 +
1690557966.7591224-CDS-D-dudresnayi_contig971:792..8981690557966.7591224-CDS-D-dudresnayi_contig971:792..898Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig971 793..898 +
1622930922.725412-CDS-D-dudresnayi_contig971:2292..24521622930922.725412-CDS-D-dudresnayi_contig971:2292..2452Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig971 2293..2452 +
1690557966.7713542-CDS-D-dudresnayi_contig971:2292..24521690557966.7713542-CDS-D-dudresnayi_contig971:2292..2452Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig971 2293..2452 +
1622930922.7463415-CDS-D-dudresnayi_contig971:4408..44981622930922.7463415-CDS-D-dudresnayi_contig971:4408..4498Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig971 4409..4498 +
1690557966.7834916-CDS-D-dudresnayi_contig971:4408..44981690557966.7834916-CDS-D-dudresnayi_contig971:4408..4498Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig971 4409..4498 +
1622930922.8073103-CDS-D-dudresnayi_contig971:5692..58461622930922.8073103-CDS-D-dudresnayi_contig971:5692..5846Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig971 5693..5846 +
1690557966.7943122-CDS-D-dudresnayi_contig971:5692..58461690557966.7943122-CDS-D-dudresnayi_contig971:5692..5846Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig971 5693..5846 +
1622930922.8355927-CDS-D-dudresnayi_contig971:6445..65301622930922.8355927-CDS-D-dudresnayi_contig971:6445..6530Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig971 6446..6530 +
1690557966.8028402-CDS-D-dudresnayi_contig971:6445..65301690557966.8028402-CDS-D-dudresnayi_contig971:6445..6530Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig971 6446..6530 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig971.28483.1

>prot_D-dudresnayi_contig971.28483.1 ID=prot_D-dudresnayi_contig971.28483.1|Name=mRNA_D-dudresnayi_contig971.28483.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=219bp
DFSKCGVCDSQMDLKKTSAGRPLLFCGTCAKGFPLPHKGKLTKQDPPFGC
PLCKFQVLSVGPGNDYTGSGYTVCPHCFNNPPTGHGGEGQSNFRCFMCSA
SCPLARRIQGGDTPIARCRKPGCGQALNIKRTRAGAYHLGCKAYPQCSGS
TVWLPKCATSVAVTEETCPRCSGPGAEDAVRRLDFTFRFQRNQVAPGTPT
SRIACPFCDSLIIELGGDG
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mRNA from alignment at D-dudresnayi_contig971:320..6531+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig971.28483.1 ID=mRNA_D-dudresnayi_contig971.28483.1|Name=mRNA_D-dudresnayi_contig971.28483.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=6212bp|location=Sequence derived from alignment at D-dudresnayi_contig971:320..6531+ (Desmarestia dudresnayi DdudBR16 monoicous)
GACTTCAGCAAGTGTGGCGTTTGTGATTCACAGATGGACCTCAAGAAGAC
GTCTGCCGGGAGGTGCGTACTACTGTAATTTTTTTGAAGGTGACGTCCAC
CGCCGTCGTGCAATGTGATAGTTCGATTGCTCCATCATGCCTTACTATTG
TTGTAGCTTGCACGTGATGTACGCCTCTAGCGAGAGAGTGAGACGAAGGC
CCGTCCTTGTCAATAGGAAAACGCACGTCAGTATTTTTTTTTGTAGAATT
GTCAGGAAAAGCACCAAAAACCAATCGCGCGCAAAATATCGATTATTTGT
ACGAAGTACGAAGTAATACTCGAATTTGGTTGGCGGCACCGGTTTTATAC
TCGTCCTAAGAGCTTTTTTTGTTTTGTATCCTGACGGCCGCAAGTCGTAT
ATCCTTTTATCGCGATTTTTGACCCTCAATTATTTTTCGACCGTTTTCTG
CGCTTGGGTCGGTGAATTGACAGACCGCTGTTGTTCTGCGGTACGTGTGC
GAAAGGGTTTCCCCTTCCGCACAAGGGGAAGCTGACCAAGCAAGATCCGC
CGTTCGGTTGTCCTCTGTGCAAATTCCAGGTGCGTCACGTGTACGCGGTC
GCGGTCGATATATCGTGTCCCTTTTTTTTTTTTTTTTTCTTTTTCGTCCC
ATTTATTATCTTTGCCCGATTCTTTCTCTAGCTCCATCTCTCTTCGAAAC
TCAGATCCGGCGTCACATAGCAGGCGCTCCTCCCGCCTTCCCACTACGGT
ACGTGCCTACGTTTTTGTCGCGAGAAGAGTGCAGCACTTTCTTCCCTCGT
CGACTTTCATCTAATTGTGCTTACTCACGCTCTCGCGTTTTCCGCGCGGA
TGCATGGCACAGAAAAGTGCCACCGGGGATCGAACCCCCAACCTCCGCCA
ACAGAGGCGAACACCCTAACCACTAGACCATTGGGCCCTATGGAAGTGGA
AATTACTTAACGTCTTGAAATAGTACGAATTAATTACGTTTTTGGCGTTT
CACGATATTTGTGCCGTTTCGTAGGGAGTAAGGAATAAAAAAAATATGAA
TCCCGCATTTTGGTTTTTGGGTGGGAGAACGCTTTTATTGTTGTTTGTGG
TGCGTAGGCAACACGCCAAAAAATAAATTTATTACTCAACAGTAATTCAA
ATATCGTGTCCTACGGATGTGGGGATTAAGTAGTGTTCTATTTGTTAGTA
GCTACCATGTTAAAAAAAAGTACCTAATACCGTTGGGATAAATAATTTTA
CCTGTATGTATTAACAACCGTCAGAACGATTCAAACCTGTTCGGGAGACT
GGGGATAATCGCCAACTTCATTATCGTGAGAAACTACGCTACTGCTACTG
CTAATTGTAATGCTGACTGAAGATACAGTCTCGTGAATTTTAATTGTTGA
CAGTTCAGAAACGACAGAAACAAAAACTTGATGACGAGTGTTACCAGCTT
TCAACGCCTGAGATAAGCGACGCAAGCGAGAGTGTCGGGGGGTCGCGTTG
ACTGTGGCGTGTAAAGACGGTGGTTGTTCTTCGTTGTTTCGGAGTATGCA
CTGCTGTAGTTTGTACTCGTAACCCTATCGACTGATAGTGATACTGCTGT
AGATGCACGAATATTCGAGGTGAAGGCGGGGCAATCCTTACCATCGTTCA
ACCCATTCAACGCTCATTTCGATGTGCATACCTTGTCCTCGTGTGGCTAT
ACGGCCGCGACTTTCGACAACTATCTCTGCCACGGCCATTCGCGTTGTCT
CTAGGCAACGCAATCAGGGAAACATTCAGACGCGACCGTGCTCCAAAAGT
GGAAACTACGTTTGCGCGTCCGATCCGCTCTTTTTCTCCATCGTTGCACC
CCCTGGGTGTACAGCACCAGGAAGATTGGTTTTGTACGATGATGATGTTA
ACATTTGTTTTTGGGTGTGATGCTTTGTTCCTTTGCCTTTGCCTTTGCCT
TTTTTGGGGGGGGGGGGTCAAAGGTTCTCTCGGTCGGCCCGGGAAACGAC
TACACCGGGAGCGGGTACACCGTTTGTCCTCACTGTTTCAACAACCCGCC
TACGGGGCACGGGGGAGAGGGACAGAGCAACTTCCGATGCTTCATGTGCA
GCGCGAGCTGTCCCCTTGCTCGTAGGATTCAAGGTTCGTGTGTGTTTTGT
TTGTGTTCTCGCCATTTCGTGCGCCTTTTCAACTTGTGGAGGCCCGGCAC
TGTCTTGGATTGCTTGCTAGCGTGGATAGTTCGGTATTAGGGATAACTCG
ACTTGGAATCACTACGTCCTCACTTGGATGTCGATTCAAAACCTCGCAGT
CCTGTTGTTTTTACCAATCCTTCGAAGTACAATAGCAGTTCTACTCCTCA
ATCAAGATTTGTTGGGCTGTGCTGTTGTCTTCGCATTAAAAGTCGTCCTT
CCTACCCCACGAAATCCAGTAGTAGCTAGCTTACTCAGAATCTGTGCTGA
TTCTTCCATCCTAGAGAAATACGAAAATTCCGCGGTCACAAGCTACATAT
AATAGCACCAAATCGCAATAGTACGAGCAAAAAAAAAAAAGAAACAGAGA
AGAAAACAAGGAAAGGCAGACAAGAAACGCAAGGAGAAAAAAAAAACAAA
AAAAAAACAGGTAGAACAGAGGGACACAAGGACGAGAAAGAAGGGAGCCC
AAACCCGCAAGGAAAAAGGAAGATGACTATTGCCGCGTTGCCCCTCCCCC
TTTCCCGTTCCCTGCTACTTAGGGCCTTCTCAGCTTCTTTCGCGTGGCGT
GTACTGCTCCTCGCCGCTTCCTCTCTGTACCACGCCTCCATGAAGGTTTC
AGCCCCCTCTACAACCCCCGATACATTTATTAAGAAACCATCCTGCCTAT
CACAAGATGTCTACGTATACCTCGCAGTCCTGGTTTAAACGTATATCAAG
TGACGTACCTCCGCGAGGATTATGCGACCATATGTACCGTCAATGTCTTA
ACCCGAACGACGCGTGGTAGTGGATCGCTGATAGTCCGTCAGCGCTGTTC
CCTGTGTAGTACGTGGGTTCCGATGTCCGTCGCGGTGCTTGTAAACGAGT
CGAACCTGATGAATGTATGGGCTTTGGTTACGCCCATCCCGGTAGACATA
GCGAAAACTACGCTCGGCGACGCAGCGCAACGGCGATGAATAGTTGCATT
TTTATTTCCATTGTCCTCGCGACCCGTGGCCTCTACCCGCTGAGTCCCCG
GCTTGTTGTCCCGTCATGTCCTGCCGTTAGACCTGGGCGCAATGGTCTGG
CGGTGCACGATATGTACACCCCACCACACGCCATCCCGACGGAGTATGAT
ATACAATCACGGGTGCCTTCTATCGGTGTCTATGTCGCTTTCCTTGTGTG
AGGCCTTCTTCGTCTGATCTGGCCGAACGACCGGCAATGTTGTATCCAAC
AACAACAACTGAAGTTCCCCACCGATGGTGGGTTTATAGCAGGGGCCAGG
GCGTGTGCTGTTTGTCGTGTGTGCGGCCACTCCCTGCCGTTTGTGTCCGA
TAGCGTGTTGTTTTTGGGAAAACACGGCCATCGTTTGGGTTTTGGGAAAA
CGTGGCGATCATGATAGATAGCGGTCGCGACTGTCGTCAGCCCAACGAGT
CAGCATTACCGACGCAAGGAGGGTTGCACGGCTTTCTCGTGAGAAGAAGA
TGTCGCAGCGAACGGCCTACCCTGGCTTCTGACACTCTCGGACGTTGGTT
TCTGCAACCAAGAGGGGGAATCGGCAGAGTACGATGGTACAAATGCTTAA
AAGAAAAGAGATTGTCAAAAAGCTTGAAAATAAACAAAAGGAGGGCTTAA
AAAAAAAAAGAGGGAACTGTAAAACAAAACTGAACCGTGGAAATTATGTG
GAGCTGAATCTTTATTTTTGCCCATCCGCCATAAGATAACAATGGTTGAA
AAATAAATATATATATAAATGGGTTTTCTAGTGAGAAGTAAATGTCGGGG
CGAGTGGCGGTGTGCAGGCGCGCTTGAGGGGGTGGAGTCCGTACTCCGGG
AACTCGCGGTCAGTCGTCATCGAATGACTACCCCGTCATTCTCTCGCCGC
CCGTTGCATATATATTTTCGGTTTGTTGCCTATCATAAGGCGGTGACACG
CCTATTGCACGATGCCGGAAACCTGGATGCGGCCAGGCTCTCAACATCAA
GCGGACGAGGGCGGGGGCGTACCACCTAGGTAAGCACGGGCGCGGGACCA
CACGCAACCAGTGAAGCTTTTTGCTGGGGGCACGATTCGTTGCTCTCTCT
TCCTCCAGGCTTGTTTTATTGTGTGGTTTACTCGAACGAGCTTTTGCTAT
ACATATGGCGAAGTACCGCACCACTGGGAGGCGAATAATGGTTTCCTGTC
ACGTCTTTTATTAACCGATTTATTTCGCGGTCGCGGCATGCTGCGCACCG
GGGGGGGCACGGTAGTCGAGTTGGAGCTTTCCAGCTTCGGGAAATCACTT
TTCTGTATATTCGGCGTGCTGCCCTGCCTATTTCGACAAGAAAAGTGGAG
AGTAGAACTGTCTCTCTATGTCGGTTTGTCGAGGTGTATATTGTGCATTT
TTTGGAGATCGGAGAAAATTGCACATACGACCCCCCGCAGGATTGGCCAA
GTATTTTGTCTGCCGTCACCGTTGCAATAACGAGGAGTAAAATGGTAGGA
ACATTTTTTTTTATGCCTCAGTAGTCTCATGACGTTGCGAGAAAATCGCC
CTCCTCATGTCGAGAGCCACGCGGACTACAAAAAGCGTTGAGGGACGATT
CCCTATGCCAGAGCAGGATGATGGTGATCACCGGTGGGCCCCCAGTCTTT
CCCAATGGGCGACTCCCGAAGTGTCTCCGTGGACGTGGTTGTCAAACGGT
CGAGTTACCAGTAGGTATTACAAGTATTAGACGTTTTAGACGTTTTAGAC
GTAGTAGACGTATTAGACGTATTGTAAGTTATTAGGCAGTATCTTCAGGG
ACGTGTTTTACCCCCTGTTATTTTGTTGTAGTCGACAGGGTTAGGGTTAA
GGCTAGTTATATAAATTGTTCCGAACTGCTGCTGAACAGCCCACAATGGT
AACTCCGGTATAGTATAACGAACATCCCATATATCCTGCCTAAGCAGTTA
TATTACTACCTCGTGGACGGCCAGTCTCTCCCATTGGCCAACGCCCCCGT
CTCTCCGTGGATGCGTTGTCAGACTTTCGAGTTGCAGCCACCGCTGCAGG
ATGTGCAAATGTTTGGTCCGCTCCCATTACCCCCTGCCTGGCCGCCGCTA
TAGGGCCAGCCCCCATCTGTCTCGAAAGGCGATGCGTTTGGTCAATGGTC
AAACGTCTATGGCAAAGCAACAAATGAGTACCGCCCCGCCCAATCTACCT
GACTCTTGTGGGTTTTTATGTAGGCTGTAAGGCCTACCCACAGTGCAGTG
GCTCCACAGTCTGGCTGCCGAAGTGCGCGACATCTGTGGCGGTTACAGAA
GAAACGTGTCCAAGGTGCAGCGGCCCCGGGGCTGAGGATGCTGTACGTCG
TCTCGACTTTACCTTCAGGTTCCAGAGGTGCGACGGGGACCTTTGCTTTC
GTTGCATGGTGTCCGTTTTTTTGCATTTTTATGTGGTGTTGACTGTATTT
TTGCGATCGGTTGGGAACAACGCTTTGTTGATTGATGGTGTTCGGTTTAT
GTCCACCCTGCGATCCGGTGTTCGACTTTCTACTGCTTGCATTCTCATCA
AGTGGTAGGCCAAAATGGCTACTGGGTGCAGGCGCGTGCGCGTACTCTCT
TGAATCATCTGGCATATTTTCGTCGGTTTTCGTTGCTAACCGACCACGGC
GCCGCTTTCATCTCGCCGCGCATACGCCACGAGAATTGTCAGCGACGAAA
CCTCCCACTGTCGTGGGGGGCCCGCGTTAGCTGACACACCGACCATTCGT
TGCATAAACCCGGCGTAATTTTGTCGCACCGTAGTTGGGCAACGGGCAAT
ACGTACAGTATGCCCAGGCCACCGCCCGGAAAACCCAACTTCGCTTTTGC
TCTGCGAGCCGCGGCGATCCTTTCCCCACGACGTGCGATGTGCCGTTGCA
ACCTATTTGCATGGTCAATATTATTGTTGTGATTATTACTTCTTTTTTCT
GCTTGGTGTTGTTGGGGCGCGAGCAGGAATCAGGTAGCCCCCGGGACGCC
AACATCGCGCATTGCGTGTCCCTTTTGCGATTCTCTTATCATTGAGCTCG
GCGGGGATGGAG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig971:320..6531+

>mRNA_D-dudresnayi_contig971.28483.1 ID=mRNA_D-dudresnayi_contig971.28483.1|Name=mRNA_D-dudresnayi_contig971.28483.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1314bp|location=Sequence derived from alignment at D-dudresnayi_contig971:320..6531+ (Desmarestia dudresnayi DdudBR16 monoicous)
GACTTCAGCAAGTGTGGCGTTTGTGATTCACAGATGGACCTCAAGAAGAC
GTCTGCCGGGAGGACTTCAGCAAGTGTGGCGTTTGTGATTCACAGATGGA
CCTCAAGAAGACGTCTGCCGGGAGACCGCTGTTGTTCTGCGGTACGTGTG
CGAAAGGGTTTCCCCTTCCGCACAAGGGGAAGCTGACCAAGCAAGATCCG
CCGTTCGGTTGTCCTCTGTGCAAATTCCAGACCGCTGTTGTTCTGCGGTA
CGTGTGCGAAAGGGTTTCCCCTTCCGCACAAGGGGAAGCTGACCAAGCAA
GATCCGCCGTTCGGTTGTCCTCTGTGCAAATTCCAGGTTCTCTCGGTCGG
CCCGGGAAACGACTACACCGGGAGCGGGTACACCGTTTGTCCTCACTGTT
TCAACAACCCGCCTACGGGGCACGGGGGAGAGGGACAGAGCAACTTCCGA
TGCTTCATGTGCAGCGCGAGCTGTCCCCTTGCTCGTAGGATTCAAGGTTC
TCTCGGTCGGCCCGGGAAACGACTACACCGGGAGCGGGTACACCGTTTGT
CCTCACTGTTTCAACAACCCGCCTACGGGGCACGGGGGAGAGGGACAGAG
CAACTTCCGATGCTTCATGTGCAGCGCGAGCTGTCCCCTTGCTCGTAGGA
TTCAAGGCGGTGACACGCCTATTGCACGATGCCGGAAACCTGGATGCGGC
CAGGCTCTCAACATCAAGCGGACGAGGGCGGGGGCGTACCACCTAGGCGG
TGACACGCCTATTGCACGATGCCGGAAACCTGGATGCGGCCAGGCTCTCA
ACATCAAGCGGACGAGGGCGGGGGCGTACCACCTAGGCTGTAAGGCCTAC
CCACAGTGCAGTGGCTCCACAGTCTGGCTGCCGAAGTGCGCGACATCTGT
GGCGGTTACAGAAGAAACGTGTCCAAGGTGCAGCGGCCCCGGGGCTGAGG
ATGCTGTACGTCGTCTCGACTTTACCTTCAGGTTCCAGAGGCTGTAAGGC
CTACCCACAGTGCAGTGGCTCCACAGTCTGGCTGCCGAAGTGCGCGACAT
CTGTGGCGGTTACAGAAGAAACGTGTCCAAGGTGCAGCGGCCCCGGGGCT
GAGGATGCTGTACGTCGTCTCGACTTTACCTTCAGGTTCCAGAGGAATCA
GGTAGCCCCCGGGACGCCAACATCGCGCATTGCGTGTCCCTTTTGCGATT
CTCTTATCATTGAGCTCGGCGGGGATGGAGAATCAGGTAGCCCCCGGGAC
GCCAACATCGCGCATTGCGTGTCCCTTTTGCGATTCTCTTATCATTGAGC
TCGGCGGGGATGGA
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