mRNA_D-dudresnayi_contig9682.28470.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig9682.28470.1 vs. uniprot
Match: A0A6H5K487_9PHAE (SPDS protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K487_9PHAE) HSP 1 Score: 476 bits (1224), Expect = 7.700e-159 Identity = 228/267 (85.39%), Postives = 251/267 (94.01%), Query Frame = 1 Query: 1 QVKEVLFHERSDFQDVLVFESAHYGKVLVLDGVIQLTERDESSYQEMITHIPCFAHGSPKKVLIVGGGDGGVLREVSRHPGVETIHMCEIDAMVCEVSQRFELCTSISFGDPRLTLVHEDAAEFVKRKGNNGYDVIIVDSSDPVGPAETLFQPAFYQNMKSALAPAGVIATQGECLWLHLPLITTVMQACTEVFASVDYAFTTVPSYPSGQIGFIIASTEERDLSTPSATPDAAMTEVLQYYSPAVHRASFVLPVFAEKEIASARRR 801 +VKEVLFHERSDFQDVLVF+S HYGKVLVLDGVIQLTERDE SYQEM+THIPCFA G PKKVLIVGGGDGGVLREV+RHPGVETIHMCEID++VCEVS+RFE CT+ +FGD RL LVHEDAAEFVK++GN+GYDVIIVDSSDPVGPAETLFQP+FYQNMK ALAP GVIATQGECLWLHLPLITTV++AC E+F SVDYAFTTVPSYPSGQIGF++AS EERDLSTP++TP+AAMTEVL+YYSP VHRA+FVLPVFAEKEIA RRR Sbjct: 23 EVKEVLFHERSDFQDVLVFDSVHYGKVLVLDGVIQLTERDECSYQEMLTHIPCFAQGDPKKVLIVGGGDGGVLREVARHPGVETIHMCEIDSVVCEVSRRFEFCTASAFGDARLKLVHEDAAEFVKKEGNSGYDVIIVDSSDPVGPAETLFQPSFYQNMKQALAPMGVIATQGECLWLHLPLITTVLRACAEIFGSVDYAFTTVPSYPSGQIGFVLASVEERDLSTPASTPNAAMTEVLRYYSPEVHRAAFVLPVFAEKEIAGVRRR 289
BLAST of mRNA_D-dudresnayi_contig9682.28470.1 vs. uniprot
Match: A0A835ZDK7_9STRA (Spermidine/spermine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDK7_9STRA) HSP 1 Score: 410 bits (1054), Expect = 1.840e-133 Identity = 192/267 (71.91%), Postives = 234/267 (87.64%), Query Frame = 1 Query: 1 QVKEVLFHERSDFQDVLVFESAHYGKVLVLDGVIQLTERDESSYQEMITHIPCFAHGSPKKVLIVGGGDGGVLREVSRHPGVETIHMCEIDAMVCEVSQRFELCTSISFGDPRLTLVHEDAAEFVKRKGNNGYDVIIVDSSDPVGPAETLFQPAFYQNMKSALAPAGVIATQGECLWLHLPLITTVMQACTEVFASVDYAFTTVPSYPSGQIGFIIASTEERDLSTPSATPDAAMTEVLQYYSPAVHRASFVLPVFAEKEIASARRR 801 QV++VLFHE+SDFQDVLVF+SA YGKVLVLDGVIQ+TERDE +YQEM+THIPCFAH PK+VLIVGGGDGG+LREV+RH VE I MCEID MVC+VS++FE T+ +FGDPRL LVHEDAAEFVKR+GN YDVIIVDSSDPVGPAETLF+P F+ +MK+AL+P G++ATQGECLWLHL LI V+++C F S++YAFTT+P+YPSGQIGF++ ST ERDLSTP+ PDAAM + L+YYSPAVHR++FVLP FAE+E+++ R+R Sbjct: 23 QVEKVLFHEKSDFQDVLVFQSATYGKVLVLDGVIQVTERDEFAYQEMLTHIPCFAHPHPKRVLIVGGGDGGILREVARHACVENIDMCEIDPMVCDVSKKFEFSTATAFGDPRLRLVHEDAAEFVKREGNGQYDVIIVDSSDPVGPAETLFKPEFFLSMKNALSPGGIVATQGECLWLHLKLIRGVLESCASTFTSLEYAFTTMPTYPSGQIGFVVGSTAERDLSTPAREPDAAMAQDLRYYSPAVHRSAFVLPAFAEREVSAVRKR 289
BLAST of mRNA_D-dudresnayi_contig9682.28470.1 vs. uniprot
Match: H3GAD3_PHYRM (PABS domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=H3GAD3_PHYRM) HSP 1 Score: 343 bits (881), Expect = 7.980e-108 Identity = 166/269 (61.71%), Postives = 217/269 (80.67%), Query Frame = 1 Query: 1 QVKEVLFHERSDFQDVLVFESAHYGKVLVLDGVIQLTERDESSYQEMITHIPCFAHGSPKKVLIVGGGDGGVLREVSRHPGVETIHMCEIDAMVCEVSQRFELCT-SISFGDPRLTLVHEDAAEFVKRKGNNGYDVIIVDSSDPVGPAETLFQPAFYQNMKSALAPAGVIATQGECLWLHLPLITTVMQACTEVFASVDYAFTTVPSYPSGQIGFIIASTEERD--LSTPSATPDAAMTEVLQYYSPAVHRASFVLPVFAEKEIASARR 798 Q++EVLF +SDFQDVLVF+SA YG VLVLDGVIQLTERDE +YQEMITH+P FAH PK+VLIVGGGDGGVLREV++H V+ + MCEIDAMVC+VS++F T + +F DPR+TL+H DAA +++ ++ +DV+IVDSSDPVGPAE L++ FY+NMK++L+P GVI TQGECLWLHL LI VMQ C +F +V+Y++TT+P+YPSGQIGFI+ S ++ + L+ P TPDA M + L+YY+P +H ASFVLP FAE++I + R+ Sbjct: 23 QMEEVLFQGKSDFQDVLVFKSATYGNVLVLDGVIQLTERDEFAYQEMITHLPMFAHKQPKRVLIVGGGDGGVLREVTKHDCVQEVVMCEIDAMVCDVSKQFFKDTVATAFDDPRVTLLHADAAVYLRENTSDKFDVVIVDSSDPVGPAEVLYRAEFYENMKNSLSPDGVICTQGECLWLHLDLIVEVMQRCQNLFPTVNYSYTTIPTYPSGQIGFIMCSLDDSEGVLAKPKRTPDAKMEQTLRYYNPKIHEASFVLPSFAERKIVAVRK 291
BLAST of mRNA_D-dudresnayi_contig9682.28470.1 vs. uniprot
Match: A0A0P1ACQ1_PLAHL (Spermidine synthase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACQ1_PLAHL) HSP 1 Score: 339 bits (870), Expect = 3.440e-106 Identity = 168/267 (62.92%), Postives = 213/267 (79.78%), Query Frame = 1 Query: 1 QVKEVLFHERSDFQDVLVFESAHYGKVLVLDGVIQLTERDESSYQEMITHIPCFAHGSPKKVLIVGGGDGGVLREVSRHPGVETIHMCEIDAMVCEVSQRFELCT-SISFGDPRLTLVHEDAAEFVKRKGNNGYDVIIVDSSDPVGPAETLFQPAFYQNMKSALAPAGVIATQGECLWLHLPLITTVMQACTEVFASVDYAFTTVPSYPSGQIGFIIASTEERDLSTPSATPDAAMTEVLQYYSPAVHRASFVLPVFAEKEIASARR 798 QV++VLF +SDFQDVLVF+S YG VLVLDGVIQLTERDE +YQEMITH+P FAH PK+VLIVGGGDGGVLREV +H VE I MCEID+MVC+VS++F T + +F DPR+TL+H DAA ++ N +DV+IVDSSDPVGPAE L++ FYQ+MK+AL+P GVI TQGECLWLHL LI VMQ C +F++V+YA++T+P+YPSGQIGFI+ S+ + + P TPDA M++ L+YYS +H ASFVLP FAE++IA+ R+ Sbjct: 27 QVEKVLFQGKSDFQDVLVFKSTTYGNVLVLDGVIQLTERDEFAYQEMITHLPMFAHKQPKRVLIVGGGDGGVLREVIKHDCVEEIIMCEIDSMVCDVSKKFFTETVATAFNDPRVTLLHADAALYLHENTTNKFDVVIVDSSDPVGPAEVLYKAEFYQSMKNALSPDGVICTQGECLWLHLDLIVDVMQRCQSLFSTVNYAYSTIPTYPSGQIGFIMCSSGQ-SVDKPKRTPDAKMSKTLRYYSAKIHEASFVLPGFAEQKIATVRK 292
BLAST of mRNA_D-dudresnayi_contig9682.28470.1 vs. uniprot
Match: A0A3M6VRP9_9STRA (PABS domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRP9_9STRA) HSP 1 Score: 338 bits (866), Expect = 1.480e-105 Identity = 162/269 (60.22%), Postives = 214/269 (79.55%), Query Frame = 1 Query: 1 QVKEVLFHERSDFQDVLVFESAHYGKVLVLDGVIQLTERDESSYQEMITHIPCFAHGSPKKVLIVGGGDGGVLREVSRHPGVETIHMCEIDAMVCEVSQRFELCT-SISFGDPRLTLVHEDAAEFVKRKGNNGYDVIIVDSSDPVGPAETLFQPAFYQNMKSALAPAGVIATQGECLWLHLPLITTVMQACTEVFASVDYAFTTVPSYPSGQIGFIIASTEERD--LSTPSATPDAAMTEVLQYYSPAVHRASFVLPVFAEKEIASARR 798 ++++VLF +SDFQDVLVF+SA YG VLVLDGVIQLTERDE +YQEMITH+P FAH PK+VLIVGGGDGGVLREV++H V+ + MCEID+MVC+VS++F T + +F DPR+TL+H DAA +++ N+ +DV+IVDSSDPVGPAE L++ FY+NMK +L+P G+I TQGECLWLHL LI VM C +F+SV+Y++TT+P+YPSGQIGFI+ S ++ + L P PDA M + L+YY+P +H ASFVLP FAE++I + R+ Sbjct: 27 EIEQVLFKGKSDFQDVLVFKSATYGNVLVLDGVIQLTERDEFAYQEMITHLPMFAHKQPKRVLIVGGGDGGVLREVTKHDCVQEVVMCEIDSMVCDVSKKFFKDTVATAFDDPRVTLLHADAAVYLRENRNDKFDVVIVDSSDPVGPAEVLYRAEFYENMKKSLSPDGIICTQGECLWLHLDLIVDVMTRCQNLFSSVNYSYTTIPTYPSGQIGFIMCSLDDSEGVLIKPKRLPDAKMEQTLRYYNPKIHEASFVLPNFAERKITTVRK 295
BLAST of mRNA_D-dudresnayi_contig9682.28470.1 vs. uniprot
Match: M4C138_HYAAE (PABS domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C138_HYAAE) HSP 1 Score: 335 bits (859), Expect = 1.580e-104 Identity = 166/269 (61.71%), Postives = 209/269 (77.70%), Query Frame = 1 Query: 1 QVKEVLFHERSDFQDVLVFESAHYGKVLVLDGVIQLTERDESSYQEMITHIPCFAHGSPKKVLIVGGGDGGVLREVSRHPGVETIHMCEIDAMVCEVSQRFELCT-SISFGDPRLTLVHEDAAEFVKRKGNNGYDVIIVDSSDPVGPAETLFQPAFYQNMKSALAPAGVIATQGECLWLHLPLITTVMQACTEVFASVDYAFTTVPSYPSGQIGFIIASTEERD--LSTPSATPDAAMTEVLQYYSPAVHRASFVLPVFAEKEIASARR 798 ++ VLF +SDFQDVLVF+SA YG VLVLDGVIQLTERDE +YQEMITH+P FAH PK+VLIVGGGDGGVLREV++H V+ I MCEID MVC VS++F T + +F DPR+TL+H DAA ++K ++ +DV+IVDSSDPVGPAE L++ FY++MK L+P GVI TQGECLWLHL LI VMQ C +F SV+Y++TT+P+YPSGQIGFII S +E + L P TPD M + L+YY+ +H ASFVLP FAE++IA+ R+ Sbjct: 27 EIDHVLFQGKSDFQDVLVFQSATYGNVLVLDGVIQLTERDEFAYQEMITHLPLFAHKQPKRVLIVGGGDGGVLREVTKHDCVQKIVMCEIDPMVCHVSKKFFKNTVATAFDDPRVTLLHADAAVYLKEHTSDKFDVVIVDSSDPVGPAEVLYRAEFYESMKKCLSPDGVICTQGECLWLHLDLIADVMQRCRALFPSVNYSYTTIPTYPSGQIGFIICSLDESEGVLVKPKRTPDDKMEQTLRYYNAKIHEASFVLPSFAERKIATVRK 295
BLAST of mRNA_D-dudresnayi_contig9682.28470.1 vs. uniprot
Match: A0A662X3P4_9STRA (PABS domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X3P4_9STRA) HSP 1 Score: 334 bits (856), Expect = 3.810e-104 Identity = 161/269 (59.85%), Postives = 210/269 (78.07%), Query Frame = 1 Query: 1 QVKEVLFHERSDFQDVLVFESAHYGKVLVLDGVIQLTERDESSYQEMITHIPCFAHGSPKKVLIVGGGDGGVLREVSRHPGVETIHMCEIDAMVCEVSQR-FELCTSISFGDPRLTLVHEDAAEFVKRKGNNGYDVIIVDSSDPVGPAETLFQPAFYQNMKSALAPAGVIATQGECLWLHLPLITTVMQACTEVFASVDYAFTTVPSYPSGQIGFIIASTEERD--LSTPSATPDAAMTEVLQYYSPAVHRASFVLPVFAEKEIASARR 798 +++ VLF +S+FQDVLVF+SA YG VLVLDGVIQLTERDE +YQEMI H+P FAH PK+VLIVGGGDGGVLREV++H VE + MCEID MVC+VS++ F + +F DPRLTL+H DAA +++ +DV+IVDSSDPVGPAE L++ FYQ+MK +LAP G++ TQGECLWLHL LI VM C +F +++Y++TT+P+YPSGQIGFI+ S +E + L+TP TPDA M + L+YY+ +H ASFVLP FAE++IA+ R+ Sbjct: 23 EMETVLFQGKSNFQDVLVFKSATYGHVLVLDGVIQLTERDEFAYQEMIAHLPLFAHAQPKRVLIVGGGDGGVLREVTKHACVEKVVMCEIDPMVCDVSKKYFGETMATAFEDPRLTLIHADAAVYLRENTEEKFDVMIVDSSDPVGPAEVLYRAEFYQSMKDSLAPNGIVCTQGECLWLHLDLIVDVMSRCQSIFPTINYSYTTIPTYPSGQIGFIMCSLDESEGALATPKRTPDAKMEQTLRYYNAKIHEASFVLPNFAERKIATVRK 291
BLAST of mRNA_D-dudresnayi_contig9682.28470.1 vs. uniprot
Match: A0A225VS69_9STRA (Spermidine synthase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VS69_9STRA) HSP 1 Score: 333 bits (855), Expect = 5.350e-104 Identity = 162/269 (60.22%), Postives = 213/269 (79.18%), Query Frame = 1 Query: 1 QVKEVLFHERSDFQDVLVFESAHYGKVLVLDGVIQLTERDESSYQEMITHIPCFAHGSPKKVLIVGGGDGGVLREVSRHPGVETIHMCEIDAMVCEVSQRFELCT-SISFGDPRLTLVHEDAAEFVKRKGNNGYDVIIVDSSDPVGPAETLFQPAFYQNMKSALAPAGVIATQGECLWLHLPLITTVMQACTEVFASVDYAFTTVPSYPSGQIGFIIASTEERD--LSTPSATPDAAMTEVLQYYSPAVHRASFVLPVFAEKEIASARR 798 +++EVLF +SDFQDVLVF+SA YG VLVLDGVIQ+TERDE +YQEMI H+P FAH PK+VL+VGGGDGGV+RE+ +H VE I CEID+MVC+VS+RF T + +F DPR+ L+H DAA +++ ++ +DV+IVDSSDPVGPAE L++ FY++MK +L+P GVIATQGECLWLHL LI VMQ C +F +VDY++TT+P+YPSGQIGFI+ S + + L+ P +PDA M + L+YYS +H ASFVLP FAE++IA+AR+ Sbjct: 23 EIEEVLFQGKSDFQDVLVFKSATYGNVLVLDGVIQVTERDEFAYQEMIAHLPLFAHKQPKRVLVVGGGDGGVVREIVKHECVEEIVWCEIDSMVCDVSKRFFKDTLATAFDDPRVKLLHADAAIYLRENTSDKFDVVIVDSSDPVGPAEVLYRAEFYESMKKSLSPDGVIATQGECLWLHLDLIVDVMQRCQNLFPTVDYSYTTIPTYPSGQIGFIMCSLNKSEGGLAKPKRSPDAKMEQTLRYYSSKIHEASFVLPSFAERKIATARK 291
BLAST of mRNA_D-dudresnayi_contig9682.28470.1 vs. uniprot
Match: A0A7S2HBD7_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2HBD7_9EUKA) HSP 1 Score: 335 bits (858), Expect = 7.490e-104 Identity = 166/269 (61.71%), Postives = 206/269 (76.58%), Query Frame = 1 Query: 1 QVKEVLFHERSDFQDVLVFESAHYGKVLVLDGVIQLTERDESSYQEMITHIPCFAHGSPKKVLIVGGGDGGVLREVSRHPGVETIHMCEIDAMVCEVSQRF-ELCTSISFGDPRLTLVHEDAAEFVKRKGNNG-YDVIIVDSSDPVGPAETLFQPAFYQNMKSALAPAGVIATQGECLWLHLPLITTVMQACTEVFASVDYAFTTVPSYPSGQIGFIIASTEERD-LSTPSATPDAAMTEVLQYYSPAVHRASFVLPVFAEKEIASARR 798 +V+EVL+ RSDFQDVLVF SA YG VLVLDGVIQ+TERDE +YQEMITHIP H P+ VLIVGGGDGGVLREV RHPGV+ I MCEID +VC+V++++ T+++F DPR+TLVH DAAE+V + YDV+IVDSSDPVGPAE+LF FY+ ++ A+ P ++ QGEC+WLHL LI V++ C VF SVDYAFTT+P+YPSGQIGF++ ST L P TPD A++ L+YYSPAVH A+FVLPVFAE +A+ RR Sbjct: 23 KVEEVLYEGRSDFQDVLVFRSATYGTVLVLDGVIQVTERDEHAYQEMITHIPMHCHADPQNVLIVGGGDGGVLREVCRHPGVQKITMCEIDPLVCDVAKQYLSASTAVAFNDPRVTLVHADAAEYVAKDDQRALYDVVIVDSSDPVGPAESLFTETFYKALRVAMRPGAIMCNQGECMWLHLDLIREVLKHCHSVFPSVDYAFTTIPTYPSGQIGFLMCSTSPGQVLRQPVRTPDPAVSASLKYYSPAVHAAAFVLPVFAETAVATVRR 291
BLAST of mRNA_D-dudresnayi_contig9682.28470.1 vs. uniprot
Match: K3WTM8_GLOUD (PABS domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WTM8_GLOUD) HSP 1 Score: 332 bits (851), Expect = 2.720e-103 Identity = 165/269 (61.34%), Postives = 201/269 (74.72%), Query Frame = 1 Query: 1 QVKEVLFHERSDFQDVLVFESAHYGKVLVLDGVIQLTERDESSYQEMITHIPCFAHGSPKKVLIVGGGDGGVLREVSRHPGVETIHMCEIDAMVCEVSQRFELCT-SISFGDPRLTLVHEDAAEFVKRKGNNGYDVIIVDSSDPVGPAETLFQPAFYQNMKSALAPAGVIATQGECLWLHLPLITTVMQACTEVFASVDYAFTTVPSYPSGQIGFIIASTEERD--LSTPSATPDAAMTEVLQYYSPAVHRASFVLPVFAEKEIASARR 798 +++EVLF +SDFQDVLVF+SA YG VLVLDGVIQ TERDE SYQEMITH+P FAH PK VLIVGGGDGGVLREV +H VE I CEID MVCEVS++F T + SF DPR TL+H DAA +++ +DVIIVDSSDPVGPAE LF+ FY+NMK +LAP G++ TQGECLWLHL LI V+ C F ++ YAFTT+P+YPSGQIGFI+ S +E L P P A + E L+YY+ VH A+FVLP FAE++I++ R+ Sbjct: 27 EMEEVLFQGKSDFQDVLVFKSATYGNVLVLDGVIQCTERDEFSYQEMITHLPMFAHAQPKNVLIVGGGDGGVLREVVKHDSVEKIVFCEIDPMVCEVSKKFFKNTLATSFDDPRCTLIHADAAAYLRNNTTEKFDVIIVDSSDPVGPAEVLFRAEFYENMKKSLAPGGIVCTQGECLWLHLDLIVEVLGRCQNYFPTIQYAFTTIPTYPSGQIGFIVCSLDESKDALVKPKRAPTAEVQETLRYYNSKVHEAAFVLPQFAERKISTVRK 295 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9682.28470.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9682.28470.1 >prot_D-dudresnayi_contig9682.28470.1 ID=prot_D-dudresnayi_contig9682.28470.1|Name=mRNA_D-dudresnayi_contig9682.28470.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=228bp MITHIPCFAHGSPKKVLIVGGGDGGVLREVSRHPGVETIHMCEIDAMVCEback to top mRNA from alignment at D-dudresnayi_contig9682:956..10383- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig9682.28470.1 ID=mRNA_D-dudresnayi_contig9682.28470.1|Name=mRNA_D-dudresnayi_contig9682.28470.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=9428bp|location=Sequence derived from alignment at D-dudresnayi_contig9682:956..10383- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig9682:956..10383- >mRNA_D-dudresnayi_contig9682.28470.1 ID=mRNA_D-dudresnayi_contig9682.28470.1|Name=mRNA_D-dudresnayi_contig9682.28470.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1368bp|location=Sequence derived from alignment at D-dudresnayi_contig9682:956..10383- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |