mRNA_D-dudresnayi_contig9611.28394.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig9611.28394.1 vs. uniprot
Match: A0A7S3HAL0_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HAL0_9STRA) HSP 1 Score: 209 bits (533), Expect = 1.190e-62 Identity = 134/320 (41.88%), Postives = 187/320 (58.44%), Query Frame = 1 Query: 16 RRIIRRNLNRILFEQDEVHLTDDGCYITHIPKEDN-RVKHIEKILKLKVGDSLRTGILDLGMSNAATIEDMVDGITINLGSKESIYTTPSPKIDLLLALPRPQKLEKLLPIISCLGVRNIFLVDACKVEKDYFGSHLLRNPAKMRQLLIEGLSQAEVDCTLPKVRVIRNLKEFLLNELNKELPL-------------------------------HSGYNN-----------ENGNYSDTITT-------NSTA----SNSSECASSATPTTTPKS----MLLAVGPEGGWLSHEVSLFQQQHFQLVHLGNRILRTDIAV 801 R + RRN+NR+L E EV++ +T + K+D+ R KHI+++L L+ GD +R+ +++ GM+N ATI+++ D + +NLG + + Y PK+DL+LALPRPQKL KLLPI+SCLGVR +++V A KVE YFGSHLLR ++RQLL+EGL+QAEVDC LP+V + +NL++F+ EL+ + L G NN E Y ++ + NS SN E S+ T KS + +A+GPEGGWL EV LFQ Q FQLV+LG R+LRTDIAV Sbjct: 29 RLMTRRNMNRLLCEVTEVNIDKHTQEMTLVLKKDDPRTKHIKEVLHLQPGDPIRSAVINRGMTNNATIQNIGDDVEVNLGCESNFYLGDRPKVDLILALPRPQKLAKLLPIMSCLGVRRLYIVGANKVEPAYFGSHLLREKKEIRQLLLEGLAQAEVDCFLPEVHIAKNLRQFVDEELSSKSDLGQNIRIIAHPPIKEYNENRLENTLSPRPMRDRGGENNLLSYQNVDNPLEKVGYVSSLQSLRISDYLNSIIPPLPSNPIEPFSTCTVHDKVKSDERGITIAIGPEGGWLDEEVRLFQHQGFQLVNLGPRVLRTDIAV 348
BLAST of mRNA_D-dudresnayi_contig9611.28394.1 vs. uniprot
Match: A0A1Z5JKH5_FISSO (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKH5_FISSO) HSP 1 Score: 145 bits (365), Expect = 3.750e-38 Identity = 105/284 (36.97%), Postives = 151/284 (53.17%), Query Frame = 1 Query: 37 LNRILFEQDEVHLTDDGCY-ITHIPKEDNRVKHIEKILKLKVGDSLRTGILDLGMSNA-----ATIEDMVDG----------------ITINLGSKESIYTTPSPKIDLLLALPRPQKLEKLLPIISCLGVRNIFLVDACKVEKDYFGSHLLRNPAKMRQLLIEGLSQAEVDCTLPKVRVIRNLKEFLLNELNKELPLHSGYNNENGNYSDTIT-----TNSTASNSSECASSATPTTTPKSMLLAVGPEGGWLS-HEVSLFQQQH-FQLVHLGNRILRTDIAV 801 LNR L +EV +D + K+D R H KIL L+ GDS+R G++ N AT++ + +G + I L S ES S + L+LALPRP +L ++LP+IS +GV ++ L +A KV KDYFGSHL R P + + LIEGL Q+ D LP+V V++NL +F+ + L++ PLHS ++ I S S PT +P+ M++AVGPEGGW +E+ F QH FQ + +G R+LR+D AV Sbjct: 18 LNRFLLSPEEVSQDEDSSLPYAVLGKDDYRTIHAAKILNLRNGDSVRAGLVSSEDHNGFLTDHATVQWLPEGKVKKAEVLNNGDPPGSLHIRLQSLESSTQRFSHSVSLILALPRPLQLGRMLPMISQMGVDHLVLTEARKVPKDYFGSHLFRKPELLTERLIEGLCQSG-DTKLPQVTVVKNLSQFMDDTLDELFPLHS--------HARVIAHPQRVVKDRVIESVRMRSVTFPTDSPRRMVIAVGPEGGWEEPNEIERFVNQHGFQQITMGTRVLRSDCAV 292
BLAST of mRNA_D-dudresnayi_contig9611.28394.1 vs. uniprot
Match: B7FST2_PHATC (16S rRNA (uracil(1498)-N(3))-methyltransferase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FST2_PHATC) HSP 1 Score: 145 bits (366), Expect = 4.760e-38 Identity = 98/280 (35.00%), Postives = 152/280 (54.29%), Query Frame = 1 Query: 37 LNRILFEQDEVHLTDDGCYITHIPKEDNRVKHIEKILKLKVGDSLRTGILDLG-----MSNAATIEDMVDG----------------ITINLGSKESIYTTPSPKIDLLLALPRPQKLEKLLPIISCLGVRNIFLVDACKVEKDYFGSHLLRNPAKMRQLLIEGLSQAEVDCTLPKVRVIRNLKEFLLNELNKELPLHSGYNNENGNYSDTITTNSTASNSSECASSATPTTTP---KSMLLAVGPEGGWLS-HEVSLFQQQHFQLVHLGNRILRTDIAV 801 LNR LF+ EV TD +P++D R H KIL L+ G+++R G++ +++ AT++ + +G + I+L ++ P + L+LALPRP +L ++LP+IS +GV ++ L A KV KDYFGSHLLRNP ++R+ LIEGL QA D LP++ ++RNL++FL NE+++ P + Y+ I S+ P +++AVGPEGGW E+ F+ FQ + +G R+LR+D AV Sbjct: 47 LNRFLFDTSEVKYTDTELPSITLPRDDFRTIHASKILGLRNGNTIRAGLVSCEVHQGLLTDDATVQWIPEGKVKKAEPLGNGNPPGSLHIHLNGLQAPAEQLVPSVSLILALPRPLQLGRMLPMISQMGVNHLVLAQAQKVPKDYFGSHLLRNPEELREKLIEGLCQAG-DVRLPQLHIVRNLRDFLTNEVDEIFPKNQ--------YARAIAHPQRTSDPMGSLKKMKQVEFPVKSSRLVVAVGPEGGWEEPDELDRFRDCGFQQITMGARVLRSDCAV 317
BLAST of mRNA_D-dudresnayi_contig9611.28394.1 vs. uniprot
Match: A0A7S4NPP0_GUITH (16S rRNA (uracil(1498)-N(3))-methyltransferase n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NPP0_GUITH) HSP 1 Score: 144 bits (362), Expect = 2.910e-37 Identity = 108/275 (39.27%), Postives = 145/275 (52.73%), Query Frame = 1 Query: 31 RNLNRILFEQDEVHLTDDGCYITHIPKEDNRVKHIEKILKLKVGDSLRTGILDLGMSNAATIEDMVDGITINLGSKESI------YTTPS-PKIDLLLALPRPQKLEKLLPIISCLGVRNIFLVDACKVEKDYFGSHLLRNP-AKMRQLLIEGLSQAEVDCTLPKVRVIRNLKEFLLNELNKELPLHSGYNNENGNYSDTITTNSTASNSSECASSATPTTTPKS---------MLLAVGPEGGWLS-HEVSLFQQQHFQLVHLGNRILRTDIAV 801 R LNR+LFE +EV + + ++ K D RV HI+KILKL+ G SLR G++D G A +E DG ++ L +S YT P+IDLL+ALPRP L L I + +GV N+ +A KV++DYFGSHLLR P +KMRQ L EGL QA + LPKV V + LK FL +L++ P DTI S P P +L+ VGPE GW +E+ L + FQ + LG R RT++A+ Sbjct: 79 RCLNRLLFEPEEVVPSSQSSCLLYLAKSDKRVTHIKKILKLENGQSLRIGVVDAGKEEDAVLEWQDDG-SLKLQISQSAEQLCAPYTADKIPRIDLLIALPRPPNLGDFLGIAAQMGVANVIFCNANKVQQDYFGSHLLRPPMSKMRQALKEGLEQAG-ETYLPKVHVAKRLKYFLEEQLDQICP-------------DTIRM------VGHPQKSWLPPLPPMRDVQVPPNGRILVGVGPEAGWQDPYELELLGEHGFQGISLGPRTYRTEVAL 332
BLAST of mRNA_D-dudresnayi_contig9611.28394.1 vs. uniprot
Match: A0A4D9D2J3_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2J3_9STRA) HSP 1 Score: 143 bits (361), Expect = 3.230e-37 Identity = 99/291 (34.02%), Postives = 160/291 (54.98%), Query Frame = 1 Query: 37 LNRILFEQDEVHLT----DDG------CYITHIPKEDNRVKHIEKILKLKVGDSLRTGILDLGMSNAATIEDMVDG-ITINLGSKESIYTTPS----PKIDLLLALPRPQKLEKLLPIISCLGVRNIFLVDACKVEKDYFGSHLLRNPAKMRQLLIEGLSQAEVDCTLPKVRVIRNLKEFLLNELNKELPLHSGYNNENGNYSDTITTNS--------TASNSSECASSATPTTTPKS------------MLLAVGPEGGWLS-HEVSLFQQQHFQLVHLGNRILRTDIAV 801 LNR+LFE +E++LT DG I + ++D R +H+ K+L+ K GD +R G+L+ G ++ A +E G + + +G + T PS P++D+LLA+ P ++E+++P + LGV + + A KVEK Y+GSHLLR P +R+L++EGLSQA D +P + + R LK FL ++L P S + + ++ T+ S + + + P PK+ +LLA+GPE GW +E+ LF++ FQ + LG R+LRT+ AV Sbjct: 3 LNRLLFEAEEINLTLRNPQDGRGEGEESAIVRLGQDDARAQHVRKVLRAKTGDEVRVGVLNGGRNDRAVVEWTEGGELHLAMGPSLPLLTPPSEALRPRVDVLLAMQAPLRMERIIPHMVALGVGRLLITSAKKVEKSYWGSHLLREPQALRELVVEGLSQAG-DTIVPDIIIDRRLKRFLSDKLEVLYP-SSPPPSASSSFQHTLRVLSHPFRALHDSVGVDTRFRQLSWPFPVPKNGLKGETAVGQPRLLLAIGPESGWEEPYELELFREHGFQQITLGPRVLRTETAV 291
BLAST of mRNA_D-dudresnayi_contig9611.28394.1 vs. uniprot
Match: A0A1Z5K163_FISSO (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K163_FISSO) HSP 1 Score: 142 bits (359), Expect = 4.780e-37 Identity = 102/284 (35.92%), Postives = 151/284 (53.17%), Query Frame = 1 Query: 37 LNRILFEQDEVHLTDDGCY-ITHIPKEDNRVKHIEKILKLKVGDSLRTGILDLGMSNA-----ATIEDMVDG----------------ITINLGSKESIYTTPSPKIDLLLALPRPQKLEKLLPIISCLGVRNIFLVDACKVEKDYFGSHLLRNPAKMRQLLIEGLSQAEVDCTLPKVRVIRNLKEFLLNELNKELPLHSGYNNENGNYSDTIT-----TNSTASNSSECASSATPTTTPKSMLLAVGPEGGWLS-HEVSLFQQQH-FQLVHLGNRILRTDIAV 801 LNR L +EV D + K+D R H KIL L+ GDS+R G++ +N AT++ + +G + I L S ES S + L+LALPRP +L ++LP+IS +GV ++ L +A KV KDYFGSHL R P + + LIEGL Q+ D LPKV ++++L +FL ++++ PLHS Y+ I S S + PT +P+ +++AVGPEGGW +E+ F +H F + +G R+LR+D AV Sbjct: 40 LNRFLLSAEEVSRDKDATLPYAILGKDDYRTIHAAKILNLRNGDSVRAGLVSSNDNNGFLTDHATVQWLPEGKIKKAEVLNNGEPPGSLHITLQSLESSTQRFSHSVSLILALPRPLQLGRMLPMISQMGVDHLVLTEARKVPKDYFGSHLFRKPELLTERLIEGLCQSG-DTKLPKVTIVKSLSQFLDGKVDELFPLHS--------YARVIAHPQRVVEDRVIESVRMRSVSFPTDSPRKIVIAVGPEGGWEEPNEIDRFVNEHDFHQITMGTRVLRSDCAV 314
BLAST of mRNA_D-dudresnayi_contig9611.28394.1 vs. uniprot
Match: K0SJH0_THAOC (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SJH0_THAOC) HSP 1 Score: 139 bits (349), Expect = 3.090e-35 Identity = 111/327 (33.94%), Postives = 164/327 (50.15%), Query Frame = 1 Query: 37 LNRILFEQDEVHLTDDGC--YITHI--PKEDNRVKHIEKILKLKVGDSLRTGIL---------DLG--MSNAATIEDMVDG------------------ITINLGSKESIY-------TTPSPKIDLLLALPRPQKLEK-----------------------LLPIISCLGVRNIFLVDACKVEKDYFGSHLLRNPAKMRQLLIEGLSQAEVDCTLPKVRVIRNLKEFLLNELNKELP--------LHSGYNNENGNYSDTITTNSTASNSSECASSATPTTTPKSMLLAVGPEGGWLS-HEVSLFQQQHFQLVHLGNRILRTDIAV 801 LNRI+F+ E+ + D Y+ + PK+D R +HI K L L+ GD +R G + LG M++ A +E + +G + I K S++ T +P++ LLLALPRP +L++ LLP+++ LGV N+ L +A KV KDYFGSHL R P+ +R LL+EGLSQ+ D LP+V V + LK FL +EL++ P H +E G + A++ S P+ +LLAVGPEGGW +E+ +FQ+ F+ + LG R+LRTD+AV Sbjct: 40 LNRIMFDATELSVVSDQSKGYLATVTLPKDDYRTRHIAKTLNLQNGDCVRAGCVRDRDPSEFDSLGGLMTDEAFVEWLPEGKIKKASPTRNREPPGSLKVLIPNPPKTSLWEDRYGAETDDTPRVSLLLALPRPLQLQRWGLFIQCENSLEFWSLLTNFRIRLLPMVAQLGVENLILTNARKVPKDYFGSHLFRKPSVLRGLLVEGLSQSG-DVRLPRVTVSKRLKIFLEDELDELFPRSQYERIIAHPQRKDETGRMTRMSDIKVNATDGS-----------PRRILLAVGPEGGWEEPYELDMFQKLGFKRITLGTRVLRTDVAV 354
BLAST of mRNA_D-dudresnayi_contig9611.28394.1 vs. uniprot
Match: A0A482S6B4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S6B4_9ARCH) HSP 1 Score: 128 bits (321), Expect = 3.210e-33 Identity = 67/134 (50.00%), Postives = 96/134 (71.64%), Query Frame = 1 Query: 22 IIRRNLNRILFEQDEVHLTDDGC--YITHIPKEDNRVKHIEKILKLKVGDSLRTGILDLGMSNAATIE-DMVDGITINLGSKESIYTTPSPKIDLLLALPRPQKLEKLLPIISCLGVRNIFLVDACKVEKDYFG 414 IIRRNLNR+L E++E+ + DD ++T + ED R KHI ILKL DS++ G+LD+G+++ + + D + + IN+G KE++ T PK+ L+LA PRP +LE++LPI+SCLGVR + LV A KVEKDYFG Sbjct: 31 IIRRNLNRVLLEENEL-VYDDSTKTHLTRLRPEDYRSKHIRSILKLNDKDSIKCGVLDVGINDKSQVYYDEGNAVVINVGKKENLIPTARPKVTLILATPRPLRLERILPIVSCLGVRKLVLVGAKKVEKDYFG 163
BLAST of mRNA_D-dudresnayi_contig9611.28394.1 vs. uniprot
Match: D8LR28_ECTSI (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR28_ECTSI) HSP 1 Score: 135 bits (339), Expect = 3.470e-33 Identity = 108/341 (31.67%), Postives = 164/341 (48.09%), Query Frame = 1 Query: 16 RRIIRRNLNRILFEQDEVHLTDDGCYITHIPKEDNRVKHIEKILKLKVGDSLRTGILDLGMSNAATI--EDMVD------------------------GITINLGSKESIYTTP-----SPKIDLLLALPRPQKLEKLLPIISCLGVRNIFLVDACKVEKDYFGSHLLRNPAKMRQLLIEGLSQAEVDCTLPKVRVIRNLKEFLLNELNKELPLH---------------------------------SGYNNENGNYSDTITTNSTASNSSECASSA-------TPTTTPKS-------MLLAVGPEGGWLS-HEVSLFQQQHFQLVHLGNRILRTDIAV 801 RR++ R LNRI+ E EV ++G +P D+R H+ +LK++ G+S+R G+++ G + A+I E+ D + ++LG + P PK+ L+LA+PRP +LE++LP+++ LGV I L A KV K YFGSH R+P +R+ LIEGLSQ+ D +P+V V R LK FL ++L++ P G E G + T + S+ A++A + PK +L+AVGPEGGW+ E+ L Q FQ V LG+R+LR+D+AV Sbjct: 78 RRLVVRCLNRIMLEPSEVVRDEEGNLSATLPAADSRTAHVRGVLKVENGESVRVGVVNAGRMDDASIAWEEPTDPPEGAPPPDIPGRQKGRKSSPKWMDLVLDLGPSDRQLLKPVPDEQRPKVALMLAVPRPLQLERILPVVASLGVTTIVLCQAKKVPKFYFGSHFFRDPPSVREKLIEGLSQSG-DTVMPEVMVARRLKIFLEDDLDRCFPRDRWVRALAHPTRLPAQVSRCAGGEATAAATAAGGEGVGVEAGVVAATAQSGRVDGVESDGAATAPVPALRFSQIEPPKGCDPADVGVLVAVGPEGGWVEPDELQLLQSFGFQAVTLGSRVLRSDVAV 417
BLAST of mRNA_D-dudresnayi_contig9611.28394.1 vs. uniprot
Match: R1F0S1_EMIHU (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F0S1_EMIHU) HSP 1 Score: 130 bits (328), Expect = 8.830e-33 Identity = 99/281 (35.23%), Postives = 145/281 (51.60%), Query Frame = 1 Query: 1 LSALNRRIIRRNLNRILFEQDEVHLTDDGCYITHIPKEDNRVKHIEKILKLKVGDSLRTGILDLGMSNAATI------EDMVDGITINLGSKESIYTTPSPKIDLLLALPRPQKLEKLLPIISCLGVRNIFLVDACKVEKDYFGSHLLRNPAKMRQLLIEGLSQAEVDCTLPKVRVIRNLKEFLLNEL---NKELPLHSGYNNENGNYSDTITTNSTASNSSECASSATP----TTTPKSMLLAVGPEGGWLSH-EVSLFQQQHFQLVHLGNRILRTDIAV 801 L+AL R LNR+L E E DG +P +D R +H+ +L+ + G S+R G+LD G S+ AT+ D G+ + LG + P+IDLLLA+PRP + +LLP+++ LGV +++ A K EK +F SHLLR +Q L L+ D +P+V V R L+ L + L + L H G + T+ + SS+ A A + +LLAVGPEGGW E+ L ++ F+ V LG+R LRTD+AV Sbjct: 18 LAALRPRCAVACLNRLLLEPSEC--AGDGT--ATLPADDPRTQHVRVVLRARDGASIRAGVLDRGSSDEATVCWLPGGADDPPGLRLALGEPSRLRPAERPRIDLLLAMPRPLQFGRLLPMVASLGVGTVYVTAAAKTEKSFFSSHLLREDQAAQQQLRAALAG---DTAVPRVVVDRRLRSLLRDRLPQYGRRLVAHP---RREGRDARTVGEALSGLASSQAAIDAGEGQDGAGSGPRVLLAVGPEGGWDEPAELELLREHGFEEVTLGSRTLRTDVAV 288 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9611.28394.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9611.28394.1 >prot_D-dudresnayi_contig9611.28394.1 ID=prot_D-dudresnayi_contig9611.28394.1|Name=mRNA_D-dudresnayi_contig9611.28394.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=267bp LSALNRRIIRRNLNRILFEQDEVHLTDDGCYITHIPKEDNRVKHIEKILKback to top mRNA from alignment at D-dudresnayi_contig9611:4022..5473+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig9611.28394.1 ID=mRNA_D-dudresnayi_contig9611.28394.1|Name=mRNA_D-dudresnayi_contig9611.28394.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1452bp|location=Sequence derived from alignment at D-dudresnayi_contig9611:4022..5473+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig9611:4022..5473+ >mRNA_D-dudresnayi_contig9611.28394.1 ID=mRNA_D-dudresnayi_contig9611.28394.1|Name=mRNA_D-dudresnayi_contig9611.28394.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1602bp|location=Sequence derived from alignment at D-dudresnayi_contig9611:4022..5473+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |