mRNA_D-dudresnayi_contig9609.28389.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig9609.28389.1 vs. uniprot
Match: A0A6H5KCQ6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCQ6_9PHAE) HSP 1 Score: 133 bits (335), Expect = 4.330e-30 Identity = 65/110 (59.09%), Postives = 82/110 (74.55%), Query Frame = 1 Query: 592 MVRPGWVSACQLDAPDESEAQLTALDLAVRPPAKVNMLRCLLACGATPTPRVILKLTRNSAKNDGGDRGGCGEVNVVRECFVGAVAASEWAPNPLIPGLNMSVALIEASR 921 M+RP W+SAC L+APDESEAQLTALDLA RPPAK+ +++CLLACGA PT RV+ +L R +++ G + VRECF+GA+ ASEWA NPLIPGLN+ A+ A R Sbjct: 1 MLRPAWISACLLNAPDESEAQLTALDLAARPPAKLGVIKCLLACGAIPTARVVQRLLRTCSEDGGAVAVSGSGLAAVRECFLGAMIASEWAVNPLIPGLNLYTAINAARR 110
BLAST of mRNA_D-dudresnayi_contig9609.28389.1 vs. uniprot
Match: D8LM43_ECTSI (Ankyrin repeat Transient receptor potential channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM43_ECTSI) HSP 1 Score: 111 bits (277), Expect = 1.600e-22 Identity = 52/79 (65.82%), Postives = 67/79 (84.81%), Query Frame = 1 Query: 550 QVAVACGAESVLAAMVRPGWVSACQLDAPDESEAQLTALDLAVRPPAKVNMLRCLLACGATPTPRVILKLTRNSAKNDG 786 QVAVACGA++VL AM+RP W+SAC L+APDESEAQLTALDLA RPPAK+ +++CLL+CGA PT RV+ +L R +++ G Sbjct: 318 QVAVACGADAVLTAMLRPAWISACLLNAPDESEAQLTALDLAARPPAKLGVIKCLLSCGAIPTARVVQRLLRTCSEDGG 396 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9609.28389.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9609.28389.1 >prot_D-dudresnayi_contig9609.28389.1 ID=prot_D-dudresnayi_contig9609.28389.1|Name=mRNA_D-dudresnayi_contig9609.28389.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=300bp MSAQCVMGNTICMYAVKTGRPDVIEAIIRRFPSDQVIDALCVKNFLGENPback to top mRNA from alignment at D-dudresnayi_contig9609:4237..11381+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig9609.28389.1 ID=mRNA_D-dudresnayi_contig9609.28389.1|Name=mRNA_D-dudresnayi_contig9609.28389.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=7145bp|location=Sequence derived from alignment at D-dudresnayi_contig9609:4237..11381+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig9609:4237..11381+ >mRNA_D-dudresnayi_contig9609.28389.1 ID=mRNA_D-dudresnayi_contig9609.28389.1|Name=mRNA_D-dudresnayi_contig9609.28389.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1800bp|location=Sequence derived from alignment at D-dudresnayi_contig9609:4237..11381+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |