mRNA_D-dudresnayi_contig9604.28388.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9604.28388.1
Unique NamemRNA_D-dudresnayi_contig9604.28388.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
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BLAST of mRNA_D-dudresnayi_contig9604.28388.1 vs. uniprot
Match: D8LN64_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN64_ECTSI)

HSP 1 Score: 432 bits (1112), Expect = 1.080e-148
Identity = 202/246 (82.11%), Postives = 226/246 (91.87%), Query Frame = 1 
Query:    1 DMGGGADTLVGRGDDIPAGDGPIYVCTRNDDLENVISRTPASRRQDLVFLQNGVLGPLLEKHGLAANTQVLIYFAVAKKGEVPIDGVTDANPEGLTSACGKWAEEFKERIAKGGLTCHTLPEDKYTARMYEKHMWICAFMLCGAAHKCNMGEVDANNSDEVRALIGEMQAAIENEHGVTFEGGVQDRLCAYARSVAHYPAAVKEFSWRNGFFWEVSENARKEGKKDPCPLHSKLLRQVADEQGLSL 738
            DMGGG DTLVGRGD IP GDGPIYVCTRNDDLE+VISRTP +RR+DLVFLQNGVLGPLLEKHGLA NTQ LIYFAV+KKGE PIDG+TDANPEGLTS CGKWA E KER+AKGGLTCH L ED+YTARMYEKH+WICAFM+ GAAHKCNMG+VDA+++DEVR LIGE+Q AIE E+GV FE GV+DRLCAY+RSVA+YPAAVKEFSWRNGFFW++SE ARKEG +DPCPLH+KLLRQVA+EQGL+L
Sbjct:   70 DMGGGGDTLVGRGDIIPDGDGPIYVCTRNDDLEDVISRTPPARREDLVFLQNGVLGPLLEKHGLAKNTQALIYFAVSKKGEPPIDGITDANPEGLTSTCGKWAGELKERLAKGGLTCHELAEDRYTARMYEKHIWICAFMVAGAAHKCNMGQVDADHADEVRTLIGELQKAIEVEYGVAFEDGVKDRLCAYSRSVANYPAAVKEFSWRNGFFWDISEKARKEGTEDPCPLHTKLLRQVANEQGLTL 315
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BLAST of mRNA_D-dudresnayi_contig9604.28388.1 vs. uniprot
Match: A0A835YGX2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGX2_9STRA)

HSP 1 Score: 328 bits (842), Expect = 1.460e-108
Identity = 153/238 (64.29%), Postives = 184/238 (77.31%), Query Frame = 1 
Query:    1 DMGGGADTLVGRGDDIPAGDGPIYVCTRNDDLENVISRTPASRRQDLVFLQNGVLGPLLEKHGLAANTQVLIYFAVAKKGEVPIDGVTDANPEGLTSACGKWAEEFKERIAKGGLTCHTLPEDKYTARMYEKHMWICAFMLCGAAHKCNMGEVDANNSDEVRALIGEMQAAIENEHGVTFEGGVQDRLCAYARSVAHYPAAVKEFSWRNGFFWEVSENARKEGKKDPCPLHSKLLRQV 714
            +MG G DTLVGR   IP G GPIYVCTRNDDLENVI RTP SRR DLVFLQNG+LGP L KHGL+ N+Q LIYFAVAK+GE PIDGVTD NPEGLT+A GKWA  FKER++ GGL+CH L   ++TA+ +EKH+WICAFML G  H  ++GEV++ + +EVR LI E+ AA   ++G  F  G  DRLCAYARSVAHYP AVKE++WRNGF+W +S+ A   G+ DP PLH+ +LRQ 
Sbjct:   16 EMGDGTDTLVGRSTTIPDGQGPIYVCTRNDDLENVILRTPPSRRDDLVFLQNGILGPFLAKHGLSNNSQALIYFAVAKQGEKPIDGVTDVNPEGLTAATGKWAPAFKERLSTGGLSCHILNTTEFTAQSFEKHIWICAFMLVGVKHGASVGEVESTHGEEVRRLIDELLAATAAKYGARFRAGAPDRLCAYARSVAHYPTAVKEWAWRNGFYWALSKEALAAGRPDPTPLHTAMLRQA 253
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BLAST of mRNA_D-dudresnayi_contig9604.28388.1 vs. uniprot
Match: A0A4D9D7H8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7H8_9STRA)

HSP 1 Score: 291 bits (745), Expect = 2.820e-94
Identity = 137/232 (59.05%), Postives = 175/232 (75.43%), Query Frame = 1 
Query:   25 LVGRGDDIPA-GDGPIYVCTRNDDLENVISRTPASRRQDLVFLQNGVLGPLLEKHGLAANTQVLIYFAVAKKGEVPIDGVTDANPEGLTSACGKWAEEFKERIAKGGLTCHTLPEDKYTARMYEKHMWICAFMLCGAAHK-CNMGEVDANNSDEVRALIGEMQAAIENEHGVTFEGGVQDRLCAYARSVAHYPAAVKEFSWRNGFFWEVSENARKEGKKDPCPLHSKLLRQV 714
            +VGR D +P  G GPIYV TRNDDL  V+ +TP +RR+DLVFLQNG+LGP L+K+GL  NTQ L+YFAVA+KG+VP DGVTD NP GLT+  G+WA +F+E + K GL CH L + ++ A M+EK MWI AFML G+ H    +GEV+ ++ ++V ALI E++ A+E    VTF+ GV+DRLCAYARSVAH+P AVKEF WRNGFFW +SE A   G+ DPCP HS +L+QV
Sbjct:    1 MVGRNDPVPVEGTGPIYVATRNDDLAAVVEKTPEARRKDLVFLQNGMLGPFLKKYGLEDNTQALVYFAVARKGDVPTDGVTDLNPNGLTAVYGEWAADFEETLTKAGLKCHMLDKGRFQAAMFEKLMWISAFMLVGSVHGGITVGEVEKSHREDVVALIQELKKALERHAKVTFQDGVEDRLCAYARSVAHFPTAVKEFPWRNGFFWNLSEEAVGRGEADPCPSHSAMLKQV 232
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BLAST of mRNA_D-dudresnayi_contig9604.28388.1 vs. uniprot
Match: W7U5Z5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U5Z5_9STRA)

HSP 1 Score: 290 bits (741), Expect = 1.100e-92
Identity = 137/237 (57.81%), Postives = 177/237 (74.68%), Query Frame = 1 
Query:   10 GGADTLVGRGDDIPA-GDGPIYVCTRNDDLENVISRTPASRRQDLVFLQNGVLGPLLEKHGLAANTQVLIYFAVAKKGEVPIDGVTDANPEGLTSACGKWAEEFKERIAKGGLTCHTLPEDKYTARMYEKHMWICAFMLCGAAHK-CNMGEVDANNSDEVRALIGEMQAAIENEHGVTFEGGVQDRLCAYARSVAHYPAAVKEFSWRNGFFWEVSENARKEGKKDPCPLHSKLLRQV 714
            G +  +VGR D +P  G GPIYV TRNDDL  V+ +TP +RR+DLVFLQNG+LGP L+ +GL  NTQ L+YFAVA+KG+VP DGVTD NP GLT+  G+WA +F+E + K GL CH L + ++ A M+EK MWI AFML G+ H    +GEV+ ++ ++V ALI E++ A+E    VTF+ GV+DRLCAYARSVAH+P AVKEF WRNGFFW++SE A   G+ DPCP HS +L+QV
Sbjct:   64 GSSTVMVGRNDPVPIEGTGPIYVATRNDDLAAVVEKTPEARRKDLVFLQNGMLGPFLKTYGLEDNTQALVYFAVARKGDVPTDGVTDLNPNGLTAVYGEWATDFEETLTKAGLKCHILDKGRFQAAMFEKLMWISAFMLVGSVHGGITVGEVEKSHREDVVALIQELKKALERHAKVTFQDGVEDRLCAYARSVAHFPTAVKEFPWRNGFFWKLSEEAVGRGEADPCPSHSAMLKQV 300
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BLAST of mRNA_D-dudresnayi_contig9604.28388.1 vs. uniprot
Match: A0A0G4FX93_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FX93_VITBC)

HSP 1 Score: 275 bits (703), Expect = 1.700e-87
Identity = 133/239 (55.65%), Postives = 173/239 (72.38%), Query Frame = 1 
Query:    1 DMGGGADTLVGRGDDIPAG-DGPIYVCTRNDDLENVISRTPASRRQDLVFLQNGVLGPLLEKHGLAANTQVLIYFAVAKKGEVPIDGVTDANPEGLTSACGKWAEEFKERIAKGGLTCHTLPEDKYTARMYEKHMWICAFMLCGAAHKCNMGEVDANNSDEVRALIGEMQAAIENEHGVTFEGGVQDRLCAYARSVAHYPAAVKEFSWRNGFFWEVSENARKEGKKDPCPLHSKLLRQV 714
            ++GG +  LVGR D IPA  +GPIYVCTRND L ++I +TPASRR+DLVFLQNG+L P L+ + L  NT  LIYFAVAK GE PIDG TD NPEGLT+  GKWA +F   +  G L+C  L +  + A MYEK +WI AFML G  +   +GEV+ ++  EV  LIGE++ A E   G+TF+ G+ +RLC+Y RSV+H+P AVKEF WRNGFFW++S+ A   G+ DPCP+H++LL+QV
Sbjct:   20 ELGGRSGVLVGRDDPIPADVEGPIYVCTRNDALASIIDKTPASRREDLVFLQNGMLEPFLQSYALQDNTMGLIYFAVAKLGEPPIDGKTDVNPEGLTAVNGKWANDFAALLRNGQLSCKVLEKAVFRASMYEKLIWIAAFMLVGTKYGVTVGEVEQSHRQEVTELIGELKRASEGL-GITFQDGMVERLCSYTRSVSHFPTAVKEFEWRNGFFWDLSKQAMDGGRADPCPIHTRLLQQV 257
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BLAST of mRNA_D-dudresnayi_contig9604.28388.1 vs. uniprot
Match: R1G2T3_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1G2T3_EMIHU)

HSP 1 Score: 271 bits (692), Expect = 9.420e-86
Identity = 133/235 (56.60%), Postives = 169/235 (71.91%), Query Frame = 1 
Query:   19 DTLVGRGDDIPAG--DGPIYVCTRNDDLENVISRTPASRRQDLVFLQNGVLGPLLEKHGLAANTQVLIYFAVAKKGEVPIDGVTDANPEGLTSACGKWAEEFKERIAKGGLTCHTLPEDKYTARMYEKHMWICAFMLCGAAHK-CNMGEVDANNSDEVRALIGEMQAAIENEHGVTFEGGVQDRLCAYARSVAHYPAAVKEFSWRNGFFWEVSENARKEGKKDPCPLHSKLLRQV 714
            D ++ RGD  PA    GPIYV TRNDDL  V++ TP  RRQDLVFLQNG+LG  LE+ GL   TQVL+Y AVAK GE PIDG+TD NP+GLT+A G+WAE F+ R+A GGLTCH    D+YT  M EKH+WICAFM+ GA H    +GEV++ ++ ++RAL+ E+ AA E   GV  E G  +RL AY RSVAH+P AVKEF WRNG+F ++S+ A  EG+ DP PLH+  L+++
Sbjct:   28 DVVLRRGDAFPAAPASGPIYVTTRNDDLAGVVAATPPERRQDLVFLQNGMLGEFLEEQGLPDATQVLLYLAVAKLGEPPIDGITDTNPDGLTTAKGRWAEAFRARLAGGGLTCHVKQGDEYTKAMLEKHVWICAFMVTGALHGGVTVGEVESAHASQLRALVDELCAAGEAALGVRLEPGAFERLAAYGRSVAHFPTAVKEFEWRNGWFHKISQRALAEGRPDPLPLHTAALQEL 262
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BLAST of mRNA_D-dudresnayi_contig9604.28388.1 vs. uniprot
Match: A0A7I8KLY6_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KLY6_SPIIN)

HSP 1 Score: 269 bits (688), Expect = 9.080e-85
Identity = 130/240 (54.17%), Postives = 169/240 (70.42%), Query Frame = 1 
Query:    1 DMGGGADTLVGRGDDIPAG-DGPIYVCTRNDDLENVISRTPASRRQDLVFLQNGVLGPLLEKHGLAANTQVLIYFAVAKKGEVPIDGVTDANPEGLTSACGKWAEEFKERIAKGGLTCHTLPEDKYTARMYEKHMWICAFMLCGAAHK-CNMGEVDANNSDEVRALIGEMQAAIENEHGVTFEGGVQDRLCAYARSVAHYPAAVKEFSWRNGFFWEVSENARKEGKKDPCPLHSKLLRQV 714
            D+G G D LVGRG  +PA  +GPI+VCTRNDDLE V+  TP SR +DL+F QNG+L P  E  GL    QVL YFAVAK GE P+DG TD NPEGLT+A GKWA     R+  GGL+C  L ++ +  +M EK +WI AFML GA H+   +G V+  +  EV +LI E+ AA   E G+TFE G+++RLCAY+R+VAH+P AVKEF WRNG+F+ +++ A  EG+ DPCPLHS  L+++
Sbjct:   56 DLGDGRDLLVGRGQPVPADFEGPIFVCTRNDDLEAVLQSTPPSRWKDLIFFQNGMLEPWFESKGLGDADQVLAYFAVAKLGEAPVDGKTDTNPEGLTAAYGKWASAVASRLNSGGLSCKVLEKEAFQKQMLEKLIWISAFMLVGARHQGVTVGTVEKEHRSEVGSLIAELAAAAAEEKGLTFEEGMEERLCAYSRAVAHFPTAVKEFKWRNGWFYALTQKAAAEGRSDPCPLHSAWLKEL 295
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BLAST of mRNA_D-dudresnayi_contig9604.28388.1 vs. uniprot
Match: A0A061SA93_9CHLO (Uncharacterized protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SA93_9CHLO)

HSP 1 Score: 270 bits (690), Expect = 1.430e-84
Identity = 128/238 (53.78%), Postives = 167/238 (70.17%), Query Frame = 1 
Query:    1 DMGGGADTLVGRGDDIPAGDGPIYVCTRNDDLENVISRTPASRRQDLVFLQNGVLGPLLEKHGLAANTQVLIYFAVAKKGEVPIDGVTDANPEGLTSACGKWAEEFKERIAKGGLTCHTLPEDKYTARMYEKHMWICAFMLCGAAHKCNMGEVDANNSDEVRALIGEMQAAIENEHGVTFEGGVQDRLCAYARSVAHYPAAVKEFSWRNGFFWEVSENARKEGKKDPCPLHSKLLRQV 714
            +MG G D L+GRG+ I   DGPI VCTRN+DL+ V+  T   RR+DLVF+QNG+L P L+  GL +NTQVL+YFAVAK G+ P DG TD NPEGLT+A GK A+   +R+A+GGL C  L    Y   M EK +WICAFM+ GA H C +GEV++ + DEV  +I E+ AA E E G+  + G Q+RL AYAR+V+H+P AVKEF WRNG+F+ +S      G+ DPCP H+ LL++V
Sbjct:   90 EMGAGEDVLIGRGEPIVGPDGPIIVCTRNNDLQGVVEATSPERREDLVFIQNGMLQPWLDSTGLGSNTQVLVYFAVAKLGDKPTDGKTDVNPEGLTAATGKHAQAVADRLARGGLACKVLDRVAYQRAMLEKLIWICAFMVVGARHGCTVGEVESQHRDEVGDVIQELAAAGERELGIQLDPGCQERLNAYARAVSHFPTAVKEFEWRNGWFYGISRRELDAGRADPCPTHTALLKEV 327
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BLAST of mRNA_D-dudresnayi_contig9604.28388.1 vs. uniprot
Match: C1MVB8_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MVB8_MICPC)

HSP 1 Score: 268 bits (684), Expect = 1.610e-84
Identity = 132/241 (54.77%), Postives = 166/241 (68.88%), Query Frame = 1 
Query:    1 DMGGGADTLVGRGDDIPAGD--GPIYVCTRNDDLENVISRTPASRRQDLVFLQNGVLGPLLEKHGLAANTQVLIYFAVAKKGEVPIDGVTDANPEGLTSACGKWAEEFKERIAKGGLTCHTLPEDKYTARMYEKHMWICAFMLCGAAHK-CNMGEVDANNSDEVRALIGEMQAAIENEHGVTFEGGVQDRLCAYARSVAHYPAAVKEFSWRNGFFWEVSENARKEGKKDPCPLHSKLLRQV 714
            DMG   D +V RGD  P+    GPIYVCTRND L+ V+  TP +RR+DLVFLQNG+L P L+  GL  NTQ L+YFAVAK  E P DG+TDANPEGLT+A G+WA+ F  R+  GGL CH L +D + A M+EK +WICAFM  GAAH    +G+V++ + +EV ALI E+ A  E+  GV F  G   RL AYAR+V+H+P AVKEF WRNGFF  +SE     G+ DP P H+ L++QV
Sbjct:   29 DMGVDGDVIVKRGDAFPSSPATGPIYVCTRNDALQGVVDATPEARRKDLVFLQNGMLQPWLDARGLGGNTQALVYFAVAKMNEKPTDGITDANPEGLTAANGEWADAFAARLRSGGLRCHVLDDDAFRASMFEKLIWICAFMGVGAAHPGATVGDVESAHKEEVEALIAELVAGSESAKGVRFAEGTIPRLAAYARAVSHFPTAVKEFEWRNGFFCGISERELAAGRLDPFPTHTALMKQV 269
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BLAST of mRNA_D-dudresnayi_contig9604.28388.1 vs. uniprot
Match: D8R8X1_SELML (Uncharacterized protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R8X1_SELML)

HSP 1 Score: 266 bits (679), Expect = 8.020e-84
Identity = 131/240 (54.58%), Postives = 168/240 (70.00%), Query Frame = 1 
Query:    4 MGGGADTLVGRGDDIPAG--DGPIYVCTRNDDLENVISRTPASRRQDLVFLQNGVLGPLLEKHGLAANTQVLIYFAVAKKGEVPIDGVTDANPEGLTSACGKWAEEFKERIAKGGLTCHTLPEDKYTARMYEKHMWICAFMLCGAAHK-CNMGEVDANNSDEVRALIGEMQAAIENEHGVTFEGGVQDRLCAYARSVAHYPAAVKEFSWRNGFFWEVSENARKEGKKDPCPLHSKLLRQV 714
            +G G D ++ RG   P+    GPI+VCTRN+DL+ V+  TPA RR+DLVF QNG+L P LEK GLA  TQVL+YFAVAK G+ P+DG TDANPEGLT+ACGKWA     R+  GGL+C  L   ++   M EK +WI AFML GA H    +G+V+    DEV  LI E+ AA  +E  V F+ G+++RLC+YARSVA++P AVKEF WRNG+F+ +SE A   G  DPCPLHS+ L++V
Sbjct:   21 LGHGRDVVLLRGQPFPSSLSSGPIFVCTRNNDLDAVVDATPAHRREDLVFFQNGMLEPWLEKRGLAEATQVLVYFAVAKLGDEPVDGKTDANPEGLTAACGKWAAAVAARLHAGGLSCKVLDAREFAKPMLEKLIWISAFMLVGARHPGATVGDVEKRYRDEVSELITELAAAASSEKSVAFDPGLEERLCSYARSVAYFPTAVKEFEWRNGWFYGISERAIASGTTDPCPLHSRWLQEV 260
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9604.28388.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN64_ECTSI1.080e-14882.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YGX2_9STRA1.460e-10864.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D7H8_9STRA2.820e-9459.05Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7U5Z5_9STRA1.100e-9257.81Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A0G4FX93_VITBC1.700e-8755.65Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
R1G2T3_EMIHU9.420e-8656.60Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7I8KLY6_SPIIN9.080e-8554.17Hypothetical protein n=2 Tax=Spirodela intermedia ... [more]
A0A061SA93_9CHLO1.430e-8453.78Uncharacterized protein n=1 Tax=Tetraselmis sp. GS... [more]
C1MVB8_MICPC1.610e-8454.77Predicted protein n=2 Tax=Micromonas pusilla TaxID... [more]
D8R8X1_SELML8.020e-8454.58Uncharacterized protein n=4 Tax=Selaginella moelle... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9604contigD-dudresnayi_contig9604:5079..10197 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score433.0
Seed ortholog evalue9.7e-119
Seed eggNOG ortholog2880.D8LN64
EggNOG OGs28JH7@1,2QRWE@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-05_003670.1
Exons6
Model size1207
Cds size738
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9604.28388.1prot_D-dudresnayi_contig9604.28388.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9604 5545..10194 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930909.3065772-UTR-D-dudresnayi_contig9604:5078..55441622930909.3065772-UTR-D-dudresnayi_contig9604:5078..5544Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9604 5079..5544 -
1690557961.764602-UTR-D-dudresnayi_contig9604:5078..55441690557961.764602-UTR-D-dudresnayi_contig9604:5078..5544Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9604 5079..5544 -
1622930909.4383116-UTR-D-dudresnayi_contig9604:10194..101971622930909.4383116-UTR-D-dudresnayi_contig9604:10194..10197Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9604 10195..10197 -
1690557961.841649-UTR-D-dudresnayi_contig9604:10194..101971690557961.841649-UTR-D-dudresnayi_contig9604:10194..10197Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9604 10195..10197 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930909.3243718-CDS-D-dudresnayi_contig9604:5544..57071622930909.3243718-CDS-D-dudresnayi_contig9604:5544..5707Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9604 5545..5707 -
1690557961.7747512-CDS-D-dudresnayi_contig9604:5544..57071690557961.7747512-CDS-D-dudresnayi_contig9604:5544..5707Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9604 5545..5707 -
1622930909.3457968-CDS-D-dudresnayi_contig9604:6966..70641622930909.3457968-CDS-D-dudresnayi_contig9604:6966..7064Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9604 6967..7064 -
1690557961.786624-CDS-D-dudresnayi_contig9604:6966..70641690557961.786624-CDS-D-dudresnayi_contig9604:6966..7064Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9604 6967..7064 -
1622930909.366017-CDS-D-dudresnayi_contig9604:7690..77991622930909.366017-CDS-D-dudresnayi_contig9604:7690..7799Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9604 7691..7799 -
1690557961.80393-CDS-D-dudresnayi_contig9604:7690..77991690557961.80393-CDS-D-dudresnayi_contig9604:7690..7799Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9604 7691..7799 -
1622930909.3855917-CDS-D-dudresnayi_contig9604:8185..83491622930909.3855917-CDS-D-dudresnayi_contig9604:8185..8349Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9604 8186..8349 -
1690557961.8131254-CDS-D-dudresnayi_contig9604:8185..83491690557961.8131254-CDS-D-dudresnayi_contig9604:8185..8349Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9604 8186..8349 -
1622930909.4001095-CDS-D-dudresnayi_contig9604:9718..98531622930909.4001095-CDS-D-dudresnayi_contig9604:9718..9853Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9604 9719..9853 -
1690557961.8224888-CDS-D-dudresnayi_contig9604:9718..98531690557961.8224888-CDS-D-dudresnayi_contig9604:9718..9853Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9604 9719..9853 -
1622930909.4169307-CDS-D-dudresnayi_contig9604:10125..101941622930909.4169307-CDS-D-dudresnayi_contig9604:10125..10194Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9604 10126..10194 -
1690557961.8318-CDS-D-dudresnayi_contig9604:10125..101941690557961.8318-CDS-D-dudresnayi_contig9604:10125..10194Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9604 10126..10194 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9604.28388.1

>prot_D-dudresnayi_contig9604.28388.1 ID=prot_D-dudresnayi_contig9604.28388.1|Name=mRNA_D-dudresnayi_contig9604.28388.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=246bp
MGGGADTLVGRGDDIPAGDGPIYVCTRNDDLENVISRTPASRRQDLVFLQ
NGVLGPLLEKHGLAANTQVLIYFAVAKKGEVPIDGVTDANPEGLTSACGK
WAEEFKERIAKGGLTCHTLPEDKYTARMYEKHMWICAFMLCGAAHKCNMG
EVDANNSDEVRALIGEMQAAIENEHGVTFEGGVQDRLCAYARSVAHYPAA
VKEFSWRNGFFWEVSENARKEGKKDPCPLHSKLLRQVADEQGLSL*
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mRNA from alignment at D-dudresnayi_contig9604:5079..10197-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9604.28388.1 ID=mRNA_D-dudresnayi_contig9604.28388.1|Name=mRNA_D-dudresnayi_contig9604.28388.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=5119bp|location=Sequence derived from alignment at D-dudresnayi_contig9604:5079..10197- (Desmarestia dudresnayi DdudBR16 monoicous)
GATATGGGAGGAGGAGCGGACACTCTCGTCGGAAGAGGCGACGACATCCC
AGCCGGCGACGGCCCCATCTACGTGAGCGTTTCGTTTAGGTTTTGTGTTA
TCCCTCACGGCCCCAGAGTTTTAGTGTTTTGCTATAAGCAGTCATTTAAA
GCACCGTAACCTACTTGTTGTTGTTGTTGGTGGTGGTGTTTTTATTTGTG
TTTTTGTTGGTGATGGTGTTTGTGGTGTTGTACCTACCCATTGCGTGTCC
GATTAACGTACGAGCTGAACATGATGCTAGTAAACTCTGTCGCTGCTGCC
GCTGCTCTGCTATTTTCGTTTTGCTGGTTTTCTTTTTTCCGCAGGTGTGC
ACTCGCAACGACGACCTGGAGAACGTAATCTCGCGAACACCCGCTTCTAG
GAGGCAAGACTTGGTTTTCCTACAGAATGGCGTGCTCGGGCCGTTGCTTG
AAAAACACGGGCTTGCGGCGAACACGCAGGTACCTTGCTGAACTGTTGGT
TTCAGTACTCAGCGACAGTAGGGGTTTCCATCCACATAAAATGCAGGCGG
TAATATGTGGCAGGCGGTAATTTAGTTACATCGCTTACCCCCATCGGGGA
GGAGCTCCAAATCCCGCTGCCGCATTATTGTAATGGGGGATTCTACCCGC
ACAAACTAGGATAAGTAGTTTTGCGGAGGGATGGGGGAGGGGGGGTTCGA
TTGTGTGATATTGCGGCTGTGATCTCGACGAGTGCAATTCAACATAAGCT
GTTTTCAGCACATACCGTGGCTGCAACCTGTCTAGTAGTTTATCTCCGAA
GTGTAGCTGTAGATCGTGCCGCCCCGAGCGTAGGAAATAACCTGATGAAG
TGTATGTGAGCCGTGCTACGGTAGGGGTTGCACTCTTTTGGGATTGTTTT
TCACCGGCTTAGGGCCTTTCACGCGAGTGGCTACCCTATATCTTTGCGGC
CATCAGCTTTGGTTCAATTTCGTTTCATGATGTGAACCACCACAGGATTG
AATATTATGCTGCGCGAAAAAATTATTTGCATGTCCGTTTTTGGGTGAGA
TACGGAGCCGTTCGCGCGAGTGGCCTAAATCCAGGAGCGAAAATGGGGAT
GCAACCCCTACCGTAGCACGGCTCATGTGTGTGTGTCAATGTCGCGGCGT
CACCGACGGTGGCTTTTCTGGGGAAACTGAGTAAAAATCCGAAGTACACA
GCATTAGCAGTCGTCGCCGAAGACTTTCTTCGTGGCGGGGACCTTGATTC
GGTGACAAGGTTTGTCAGCAAGAAAGTGCCCCGAGAATATTCTTTTTTTT
TATGTATGTACTACTATCAAGAAGGATATAATAACCGATATCTGTGCCCC
TGAAGCATGCCGCGGCTAACGCATGGATTGATGGGTGTCCGGCTATCGAG
TCCTTAGAGGAAAGGCAGACGGTACAACTTGTGACTCACGGGAAAAATGT
ATACAGCCCCCTCTAAGAACCGCTTTTGGTACTCGTATGTCATGAGCAGC
CCCTACGAGTTACCTGCCGCCGGGACCAACGACAGACCAACGCCGGCAAA
CGTAAAATACTACACATAGCCTCGCAATTACCAACCCCACTGATTACCTT
CTCGCCAAGCCAAGAGGCTCGATCAATCGTCCATGCACACCGCTTAGCCT
GTTGTTGTCATTGTTGGAATTTGTTTTCATCTCTTCGGTTGTTGCGCGCA
GCATGCCGATCAGGTAGGCACGTCAAAAGACGCGGAAGTGTTTTGGAGCT
TACGCTTTTGTGTTACCCACCCCCCGGAGAATAACAATGGTTGGAAAAAG
ACAAATTGTAGGCGTGCCTTTAATGGTTATTTCATTTATCTGATGCAGGT
GTTGATCTACTTTGCCGTCGCGAAGAAGGGAGAGGTCCCGATCGACGGCG
TCACTGACGCCAATCCCGAAGGGTTGACCTCTGCGTGCGGAAAGTGGGCG
GAGGAGTTTAAGGAGAGGATCGCAAAGGGGGGGCTCACCTGCCACACGCT
GCCCGAAGACAAGTACGCGCGGTGCCACGCTTGTTTTTGTTGGTGTACTG
GTTGATATTTCTGTGTCACGAGGGTGTGCTCGTTTGACTGCTGTGCTCTC
GCTTGGACGGGATCACACCCGGTGGATTTGATTTAGTAGATTACCTTCCT
CTCGCTTTAAAGCCCCTCGCGTTAGCCTGTTGTCCAAGCCGCGGTCACGA
TGCAAAGGAAGCATCCGAAGGAACAAACGTTAAAAGTATAAAACGTTGAT
CGCAGAATGAATGATGAAAGACGGGCCAGCTGTGCCACGGAAAAGTTTTC
GTCCGGTAGTGTCTCAGATCCGTTTCTTCCTGGGAGAAATCCTGTAGCTG
GCGCCGTCTTATCTCGTCATTGGCAACCTTGTTTTGCTTCTATCCCAGGT
ATACTGCTAGGATGTACGAGAAGCACATGTGGATCTGCGCCTTTATGCTG
TGCGGCGCGGCTCACAAGTGCAACATGGGGGAGGTTGACGCAAACAACTC
CGACGAGGCAAGTAAAGAGAGACCGCCCTAGGATAGCTCCTTTTGTTGCC
TCTGCATACCAAATCTTCGCCCATTGATCAGAGCACCCCCGGATTCCACA
ATGTCGTGTAAGTTAGTGGCTATGATGGTGATGATTTTGATATACTTGAT
AGTATGATGATGATGATGATGGTGATGAAGATGATCGTGGTGATAGTGAT
GACGATGACGATGATGATTATTCTCACTATAGCTCATTTACCTAAAATGG
AGACCGTGGTTCCAAGATAGATGCAACGTCCCCTATAGAAAGGCTGAATA
TTGAATATGTAAGGAGTGAGAAATAGTACTACAGGAACAGGAGAAAATCG
TAAACTAAACACTTCATCTTGCAAAGTTGCACGAAAGTATGTATAGAACC
TAAGAAAAACGATCAGCGACGCTTCTGTTTCAGACGTCAAGCTAGAGTAC
ACTAGGATTCGTGTAGTATAGCTTGATGCACGCACCTGGGCGCGTTTTGG
GTTTATACTTCGTATAGAAGCTCCGGGGGACGGAAGGTTGTCGAGATCGA
AGAGGAGTTAGAATTTAACCAACCATGAGCGTGTGATTGTCTTACAAACC
TCGGGCGCTCGTGATTGGTCGGTGTTTTTGAAGGTGCGGGCGCTGATTGG
CGAGATGCAGGCTGCGATAGAGAACGAGCACGGAGTCACTTTTGAGGGAG
GTGTACAGGACCGCCTCTGTGCTTACGCCAGGTAAACCTCAATCATGATG
GACGACATGTCCCTCAATGCTCTATGACAGACTTCCATGGACGATATGAT
TTGCTACATTGGTGCTTGGAGGTTGTCACGTGGAAGCCGAGGCGCTCAAA
CAGGTTGTCAGGGGAGCAATACTAGAAATGCGGCGTGACCCATGTCAACA
CACGGAAAAATCAAGCCCATAATAAGGCCTTTTCTTGAAGAGTAACGGTT
TCATGGCGCCTGTTAAGTAGCATCAGTTGGAGGCAAAACATGGCGCGAGA
CTGTTACCATGGGTCATGAACACGTAACTACACTAATAAATGGAAAACCA
AGCCCATAACAAGGCCTCCTTGCAGTATGACGGTTTCATGGCTGCTTGCG
CGCCCCCTGTTATGTAGCGTCGGTTGGTGGAAGAATAGACGTGGCGTGAG
GCTGTTGACATTGCGCATGACTGAACAAACGGCCGGTGTGTATATTTTTT
AAGTTTGATGCCAACCTCACGTGGCCGGGGAACAAATAGAAACGTCGAGG
CTCCGAAAACGGTTAATCTGTCCGACCACGACTACGTTGTGATGTGGCAC
TCTGCAGTCGATGCAGGGTTTCGTTGAGATGTAGGAAAATTTAGATAGAG
CTCACACGTTTGGTTTTTTCGTCGCGTATTCGTTCGTCTTCGGGGGTGAA
CGGGACAGCGTAGGGCTTCATGGAGTATCATACTTCATCGTGAGTGACTT
TCGCTTTCTATGTCTAGACAACGGGGTCAGGGAGGCAATGGTGGTGAAGA
ATGGGATCGAATCGCCCTCCAAATGTTTACTTCTGCTATTTTATTTATGT
CTCACTTTGACTTTCCTAGCCCAGGTCACAAAATTTCGTGGCTTTCTGGG
CAAGCCGTGGCCACTTGTGTCTACCCTTCTTCCCCCCGGTGCATGCCTAG
CAGTAGTTTTTTATCGTGCATAGGGTTCATAAATGGGACGGAAAAAAACA
AAAAACAAAAAAAAGGGTTCAGCATTGCCATGGCACATCGATTTTATTCG
TCGAATTTTGCTTACTCGCGCTCTCGCACTTTCCGTGAACGTGTGCGAAA
TTTATTAATGCGTTAATAGGTCTGTAGAGCTAATATCTTAATATTAATCA
TACAAAAATAACTACTGCAGACAGAATTGAAAAAAAAATGCATGCTACGA
GTATAACAGCGCGATAAAAAAATCCAACTAAACTTTTCACACGTTTCACC
TTTTTTTTGGGGGGGGGCGGGGGGGCATTTGATTTGGCAGGTCGGTTGCG
CATTATCCCGCGGCGGTGAAGGAATTCTCCTGGCGCAACGGATTTTTCTG
GGAAGTTTCCGAAAATGCCAGGAAGGAGGGGAAGAAGGATCCCTGTCCCT
TGCACAGCAAGCTTCTGAGACAGGTGGCGGACGAGCAGGGGCTGTCTCTT
TGACGACACCTTGGAAGGCGTTTGCTTGAACGTCCAGAACGTGTTCGAGG
ATTTTACTGCAGCAGCACGAGGCCGTGTGGAGATTTCGGGCGTCTCATTT
CGTTGTCCGCATTTCGCGTGTAGGGTGCTGGAAGAAATTGCGTATAACCG
CGATACTTAGTTGTATTTATGCGCCGCAAAGACGATGCTTGACGGCTCGA
GTATTAATGATACAAGGATGGCGTTGTTGGTGTACATTTTTTGTCTTGTT
TTGTCCTCCGGTGGATGGTTAGCTGATCATATGAACGGGACGTCGCTTTA
GAGTTGTGGTCGCTAGCGGAAACGAGCAACTCGTACCCAACGGCCGCGAC
ACTTTGAGCCGCTTGACTTATTTGCTTGTCGCTACGATGCCTCGGCCACG
ATGACGAGGGAAAAGTGCAAGTATTTTTGAATGGACCGCTTTTTTTTTTT
TGGGCAATAGCCAAAAACG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9604:5079..10197-

>mRNA_D-dudresnayi_contig9604.28388.1 ID=mRNA_D-dudresnayi_contig9604.28388.1|Name=mRNA_D-dudresnayi_contig9604.28388.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1476bp|location=Sequence derived from alignment at D-dudresnayi_contig9604:5079..10197- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGGAGGAGGAGCGGACACTCTCGTCGGAAGAGGCGACGACATCCCAGC
CGGCGACGGCCCCATCTACATGGGAGGAGGAGCGGACACTCTCGTCGGAA
GAGGCGACGACATCCCAGCCGGCGACGGCCCCATCTACGTGTGCACTCGC
AACGACGACCTGGAGAACGTAATCTCGCGAACACCCGCTTCTAGGAGGCA
AGACTTGGTTTTCCTACAGAATGGCGTGCTCGGGCCGTTGCTTGAAAAAC
ACGGGCTTGCGGCGAACACGCAGGTGTGCACTCGCAACGACGACCTGGAG
AACGTAATCTCGCGAACACCCGCTTCTAGGAGGCAAGACTTGGTTTTCCT
ACAGAATGGCGTGCTCGGGCCGTTGCTTGAAAAACACGGGCTTGCGGCGA
ACACGCAGGTGTTGATCTACTTTGCCGTCGCGAAGAAGGGAGAGGTCCCG
ATCGACGGCGTCACTGACGCCAATCCCGAAGGGTTGACCTCTGCGTGCGG
AAAGTGGGCGGAGGAGTTTAAGGAGAGGATCGCAAAGGGGGGGCTCACCT
GCCACACGCTGCCCGAAGACAAGTGTTGATCTACTTTGCCGTCGCGAAGA
AGGGAGAGGTCCCGATCGACGGCGTCACTGACGCCAATCCCGAAGGGTTG
ACCTCTGCGTGCGGAAAGTGGGCGGAGGAGTTTAAGGAGAGGATCGCAAA
GGGGGGGCTCACCTGCCACACGCTGCCCGAAGACAAGTATACTGCTAGGA
TGTACGAGAAGCACATGTGGATCTGCGCCTTTATGCTGTGCGGCGCGGCT
CACAAGTGCAACATGGGGGAGGTTGACGCAAACAACTCCGACGAGGTATA
CTGCTAGGATGTACGAGAAGCACATGTGGATCTGCGCCTTTATGCTGTGC
GGCGCGGCTCACAAGTGCAACATGGGGGAGGTTGACGCAAACAACTCCGA
CGAGGTGCGGGCGCTGATTGGCGAGATGCAGGCTGCGATAGAGAACGAGC
ACGGAGTCACTTTTGAGGGAGGTGTACAGGACCGCCTCTGTGCTTACGCC
AGGTGCGGGCGCTGATTGGCGAGATGCAGGCTGCGATAGAGAACGAGCAC
GGAGTCACTTTTGAGGGAGGTGTACAGGACCGCCTCTGTGCTTACGCCAG
GTCGGTTGCGCATTATCCCGCGGCGGTGAAGGAATTCTCCTGGCGCAACG
GATTTTTCTGGGAAGTTTCCGAAAATGCCAGGAAGGAGGGGAAGAAGGAT
CCCTGTCCCTTGCACAGCAAGCTTCTGAGACAGGTGGCGGACGAGCAGGG
GCTGTCTCTTTGAGTCGGTTGCGCATTATCCCGCGGCGGTGAAGGAATTC
TCCTGGCGCAACGGATTTTTCTGGGAAGTTTCCGAAAATGCCAGGAAGGA
GGGGAAGAAGGATCCCTGTCCCTTGCACAGCAAGCTTCTGAGACAGGTGG
CGGACGAGCAGGGGCTGTCTCTTTGA
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