mRNA_D-dudresnayi_contig9589.28375.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig9589.28375.1 vs. uniprot
Match: A0A6U0JAP0_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0JAP0_9STRA) HSP 1 Score: 132 bits (332), Expect = 7.810e-36 Identity = 64/129 (49.61%), Postives = 89/129 (68.99%), Query Frame = 1 Query: 82 EQQLSLTKPLSKKDRFIVNMLNSA-HRDDCWVITDPEGNDNPIVYVSPGFRTATGYSYEEMVGRNCRFLQGDGTNKEEVSKIKFATEHDTEASANITNYRRDGTPFHNEFFVTPLHTEEGAPAYFLSVQ 465 ++Q K LS++D IV+MLNSA H D + + DP+ D PIV+ S GF TGY+ E+ GRNCRFLQG GT K +V KI+ A + + E S N+ NY++DGT F+NEFF++PL+ E+G AY++ VQ Sbjct: 63 QRQFVAKKELSERDATIVDMLNSAGHEDVSFCLCDPDQEDCPIVFASDGFCNFTGYAVSEIEGRNCRFLQGPGTEKADVDKIRSAIKSEKEESVNLLNYKKDGTSFNNEFFLSPLYEEDGKLAYYIGVQ 191
BLAST of mRNA_D-dudresnayi_contig9589.28375.1 vs. uniprot
Match: A0A835ZDN1_9STRA (PAS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDN1_9STRA) HSP 1 Score: 127 bits (319), Expect = 2.410e-34 Identity = 64/137 (46.72%), Postives = 85/137 (62.04%), Query Frame = 1 Query: 61 IMSMIQEEQQLSLTKPLSKKDRFIVNMLNSAHRDD-CWVITDPEGNDNPIVYVSPGFRTATGYSYEEMVGRNCRFLQGDGTNKEEVSKIKFATEHDTEASANITNYRRDGTPFHNEFFVTPLH-TEEGAPAYFLSVQ 465 ++ ++ +K L KD +V+MLNS D CWV+TDP+ DNPIV+ S GF TGY+ E+ GRNCRFLQG TN +V I+ A T+A+ + NYR+DGT F N+FF+ PLH GA AY+L VQ Sbjct: 16 VLPLVTASGDFEPSKELKPKDMILVDMLNSRDEPDICWVVTDPDLEDNPIVFSSEGFSRYTGYAKSEIEGRNCRFLQGKETNPADVETIRAAIGAQTDANVCLLNYRKDGTAFLNQFFICPLHDAATGAVAYYLGVQ 152
BLAST of mRNA_D-dudresnayi_contig9589.28375.1 vs. uniprot
Match: K0R341_THAOC (PAS domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R341_THAOC) HSP 1 Score: 127 bits (318), Expect = 8.720e-34 Identity = 61/156 (39.10%), Postives = 99/156 (63.46%), Query Frame = 1 Query: 1 IKFHNLTGEFLFLHIFKYHKIMSMIQEEQQLSLTKPLSKKDRFIVNMLNSA-HRDDCWVITDPEGNDNPIVYVSPGFRTATGYSYEEMVGRNCRFLQGDGTNKEEVSKIKFATEHDTEASANITNYRRDGTPFHNEFFVTPLHTEEGAPAYFLSVQ 465 I + + G++ F + + +++ ++++ +K L+++D I++MLNSA H D + + D E D PI++ S GF TGY + E+ GRNCRFLQG T KE+V +I+ A + TEAS N+ NY++DGT F+N+FF+ PL + AY++ VQ Sbjct: 31 ISYRGIRGKWHFCPSYVLQERINVPRQQRTFKASKRLAERDNTIIDMLNSAGHEDVSFCVCDHEKPDCPIIFASDGFCKLTGYGHTEIEGRNCRFLQGSETRKEDVDRIRSAIKSQTEASVNLLNYKKDGTAFNNQFFLAPLRDADERTAYYIGVQ 186
BLAST of mRNA_D-dudresnayi_contig9589.28375.1 vs. uniprot
Match: A0A7S2U740_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U740_9STRA) HSP 1 Score: 125 bits (313), Expect = 2.360e-33 Identity = 62/122 (50.82%), Postives = 84/122 (68.85%), Query Frame = 1 Query: 103 KPLSKKDRFIVNMLNSA-HRDDCWVITDPEGNDNPIVYVSPGFRTATGYSYEEMVGRNCRFLQGDGTNKEEVSKIKFATEHDTEASANITNYRRDGTPFHNEFFVTPLHTEEGAPAYFLSVQ 465 K L +KD I++ML+SA H + C+ +TDP DNPIV+ S GF TGY E+ GRNCRFLQG T +VS+I+ A E +T+ S N+ NYR+DGTPF NEFF++PL ++ A Y++ VQ Sbjct: 38 KQLCEKDCIILDMLSSAGHENVCFCVTDPSQVDNPIVFASDGFCKFTGYLPTEIEGRNCRFLQGPDTCASDVSQIRDAIEKETDTSVNLLNYRKDGTPFVNEFFLSPLRDDDHAIIYYIGVQ 159
BLAST of mRNA_D-dudresnayi_contig9589.28375.1 vs. uniprot
Match: A0A7R9VLF4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VLF4_9STRA) HSP 1 Score: 124 bits (311), Expect = 3.290e-33 Identity = 58/128 (45.31%), Postives = 88/128 (68.75%), Query Frame = 1 Query: 85 QQLSLTKPLSKKDRFIVNMLNS-AHRDDCWVITDPEGNDNPIVYVSPGFRTATGYSYEEMVGRNCRFLQGDGTNKEEVSKIKFATEHDTEASANITNYRRDGTPFHNEFFVTPLHTEEGAPAYFLSVQ 465 +Q K L ++D I++MLNS H C+ + DP+ D PI++ S GF TGYS++E+ G+NCRFLQG T+K++V +I+ A + +TE S N+ NYR+DG+ F NEFF++PL+ ++ AYF+ VQ Sbjct: 28 RQFDPKKKLCERDYTIIDMLNSKGHEAVCYCVCDPDLEDMPIIFSSDGFCDFTGYSHDEIEGKNCRFLQGADTSKDDVDRIRKAIKEETETSVNLLNYRKDGSTFINEFFISPLYDDKKKLAYFIGVQ 155
BLAST of mRNA_D-dudresnayi_contig9589.28375.1 vs. uniprot
Match: A0A7S3QJQ0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJQ0_9STRA) HSP 1 Score: 124 bits (310), Expect = 7.900e-33 Identity = 68/158 (43.04%), Postives = 95/158 (60.13%), Query Frame = 1 Query: 19 TGEFLFLHIFKYHKIMSMIQEEQQ------LSLTKPLSKKDRFIVNMLNS-AHRDDCWVITDPEGNDNPIVYVSPGFRTATGYSYEEMVGRNCRFLQGDGTNKEEVSKIKFATEHDTEASANITNYRRDGTPFHNEFFVTPLHTEEGA--PAYFLSVQ 465 G FLH F K + +EE++ S K L +KD +V+MLNS H C+ I DP+ D PI++ S GF TGY+Y+E+ GRNCRFLQG T+KE+V I+ A + +TE + N+ NYR+DG F N+FF+ PLH + AY++ VQ Sbjct: 9 AGILSFLH-FLADKFQGLEEEEKKSSNVRSFSPLKSLIEKDHVLVDMLNSHGHEQVCFCICDPDVMDCPIIFASEGFCNFTGYNYDEIEGRNCRFLQGPKTSKEDVDAIRKAIKEETEVNVNLLNYRKDGATFVNQFFLAPLHYRDDPVKAAYYIGVQ 165
BLAST of mRNA_D-dudresnayi_contig9589.28375.1 vs. uniprot
Match: A0A1E7EP39_9STRA (PAS domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EP39_9STRA) HSP 1 Score: 122 bits (305), Expect = 3.900e-32 Identity = 58/122 (47.54%), Postives = 80/122 (65.57%), Query Frame = 1 Query: 103 KPLSKKDRFIVNMLNSA-HRDDCWVITDPEGNDNPIVYVSPGFRTATGYSYEEMVGRNCRFLQGDGTNKEEVSKIKFATEHDTEASANITNYRRDGTPFHNEFFVTPLHTEEGAPAYFLSVQ 465 KPLS++D I++M+NS H + I DP+ D PI++ S GF TGY +E+ GRNCRFLQG T KE++ I+ A + +TEAS N+ NYR+DGT F N+FF+ PL + YF+ VQ Sbjct: 39 KPLSERDMTIMDMINSVGHEAVSFCICDPDQKDCPIIFASDGFCNFTGYDCQEIEGRNCRFLQGPDTKKEDIDTIRQAVKEETEASVNLLNYRKDGTSFANQFFLAPLRGSDSTLLYFIGVQ 160
BLAST of mRNA_D-dudresnayi_contig9589.28375.1 vs. uniprot
Match: A0A7S1BVS1_9STRA (Hypothetical protein n=4 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVS1_9STRA) HSP 1 Score: 122 bits (305), Expect = 8.270e-32 Identity = 60/127 (47.24%), Postives = 82/127 (64.57%), Query Frame = 1 Query: 88 QLSLTKPLSKKDRFIVNMLNSA-HRDDCWVITDPEGNDNPIVYVSPGFRTATGYSYEEMVGRNCRFLQGDGTNKEEVSKIKFATEHDTEASANITNYRRDGTPFHNEFFVTPLHTEEGAPAYFLSVQ 465 Q +K L ++D ++ MLNS H C+VI+DP+ D PI +VS GF T Y E+ GRNCRFLQG GT K +V +I+ A + + S N+ NYR+DG+ F NEFF++PL+ E G AYF+ VQ Sbjct: 32 QFEPSKLLCERDSIVIAMLNSPDHESTCYVISDPDLPDCPITFVSDGFCAFTQYPRNEIEGRNCRFLQGKGTEKADVDRIRKAIKEEKGTSVNLLNYRKDGSTFANEFFISPLYAEGGDLAYFIGVQ 158
BLAST of mRNA_D-dudresnayi_contig9589.28375.1 vs. uniprot
Match: A0A7S2LU08_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LU08_9STRA) HSP 1 Score: 119 bits (297), Expect = 6.980e-31 Identity = 54/121 (44.63%), Postives = 79/121 (65.29%), Query Frame = 1 Query: 103 KPLSKKDRFIVNMLNSAHRDDCWVITDPEGNDNPIVYVSPGFRTATGYSYEEMVGRNCRFLQGDGTNKEEVSKIKFATEHDTEASANITNYRRDGTPFHNEFFVTPLHTEEGAPAYFLSVQ 465 K L ++D I++MLNS + ITDP DNP++++S GF TGY ++++VGRNCRFLQG T+ ++V I A + + E S N+ NY++DGT F NEF++T L T AYF+ +Q Sbjct: 44 KRLCERDYIILDMLNSTPESVSFCITDPHQTDNPVIFISSGFTKLTGYQFDDIVGRNCRFLQGKETSPQDVKWISDALKSEKECSVNLLNYKKDGTQFVNEFYLTQLRTPNQELAYFIGIQ 164
BLAST of mRNA_D-dudresnayi_contig9589.28375.1 vs. uniprot
Match: A0A126WVC6_9PHAE (Putative LOV domain-containing protein n=2 Tax=Ectocarpales TaxID=2877 RepID=A0A126WVC6_9PHAE) HSP 1 Score: 117 bits (294), Expect = 1.110e-30 Identity = 57/124 (45.97%), Postives = 80/124 (64.52%), Query Frame = 1 Query: 100 TKPLSKKDRFIVNMLNSAHRDDC--WVITDPEGNDNPIVYVSPGFRTATGYSYEEMVGRNCRFLQGDGTNKEEVSKIKFATEHDTEASANITNYRRDGTPFHNEFFVTPLHTEEGAPAYFLSVQ 465 +K LS KD +V+M+N + +TDP+ DNPI++ S GF TGY+ EE+ GRNCRFLQG T+ +V+KI+ A EA + NY++DG+ FHN+FF+TP+ EG AYFL +Q Sbjct: 20 SKLLSVKDTILVDMMNGPENSKVVSYCVTDPDLEDNPIIFCSDGFADFTGYAKEEVEGRNCRFLQGAKTDPGDVTKIREAVTEKKEACLCLLNYKKDGSTFHNQFFLTPMFDAEGTLAYFLGIQ 143 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9589.28375.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9589.28375.1 >prot_D-dudresnayi_contig9589.28375.1 ID=prot_D-dudresnayi_contig9589.28375.1|Name=mRNA_D-dudresnayi_contig9589.28375.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=155bp IKFHNLTGEFLFLHIFKYHKIMSMIQEEQQLSLTKPLSKKDRFIVNMLNSback to top mRNA from alignment at D-dudresnayi_contig9589:2312..2776- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig9589.28375.1 ID=mRNA_D-dudresnayi_contig9589.28375.1|Name=mRNA_D-dudresnayi_contig9589.28375.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=465bp|location=Sequence derived from alignment at D-dudresnayi_contig9589:2312..2776- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig9589:2312..2776- >mRNA_D-dudresnayi_contig9589.28375.1 ID=mRNA_D-dudresnayi_contig9589.28375.1|Name=mRNA_D-dudresnayi_contig9589.28375.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=930bp|location=Sequence derived from alignment at D-dudresnayi_contig9589:2312..2776- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |