mRNA_D-dudresnayi_contig9580.28368.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9580.28368.1
Unique NamemRNA_D-dudresnayi_contig9580.28368.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
[Close]
BLAST of mRNA_D-dudresnayi_contig9580.28368.1 vs. uniprot
Match: D8LEM2_ECTSI (Patatin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM2_ECTSI)

HSP 1 Score: 306 bits (784), Expect = 5.030e-94
Identity = 143/189 (75.66%), Postives = 168/189 (88.89%), Query Frame = 2 
Query:  968 TLSEWLKQGPFVLSMAPGFFGFYAHVGALMALEDEDLLEGVSYATGASAGGLVAGLFAAGVSPGTMGKKVVRFRRSDFWDPVGFGGMLKGKKFEGLVESCLPESVRHFDECPVPMAVSAFDVSRLATRTVTQGDIAPALRATCTFPGLFAPVWHPQGVLVDGGIRDTTGMWCVPSGREDCRRVLNVTFG 1534
            +LS WLK+GPFVLSM+PGFFGFYAH+GAL+AL++E LL  VS+ATGASAGGLVAGLFAAG+SP  MG+ VV+FRRSDFWDPVGFGG+L+GKKFE +V+  LP+ VR FD+  +P+AVSAFDVSRL TRT+ +G IA ALRATCTFPGLFAPVWH +GVLVDGG+RDTTGMWCVP  R+DCRR+LNVTFG
Sbjct:   35 SLSAWLKEGPFVLSMSPGFFGFYAHIGALIALDNEGLLNEVSFATGASAGGLVAGLFAAGLSPTDMGETVVKFRRSDFWDPVGFGGLLRGKKFEDIVKGTLPDDVRRFDQGRIPLAVSAFDVSRLMTRTLDEGCIAQALRATCTFPGLFAPVWHDRGVLVDGGVRDTTGMWCVPEERQDCRRILNVTFG 223
[Close]
BLAST of mRNA_D-dudresnayi_contig9580.28368.1 vs. uniprot
Match: A0A6H5L0Q6_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Q6_9PHAE)

HSP 1 Score: 303 bits (776), Expect = 1.080e-91
Identity = 142/189 (75.13%), Postives = 166/189 (87.83%), Query Frame = 2 
Query:  968 TLSEWLKQGPFVLSMAPGFFGFYAHVGALMALEDEDLLEGVSYATGASAGGLVAGLFAAGVSPGTMGKKVVRFRRSDFWDPVGFGGMLKGKKFEGLVESCLPESVRHFDECPVPMAVSAFDVSRLATRTVTQGDIAPALRATCTFPGLFAPVWHPQGVLVDGGIRDTTGMWCVPSGREDCRRVLNVTFG 1534
            +LS WLK+GPFVLSM+PGFFGFYAH+GAL+AL++E LL  VS+ATGASAGGLVAGLFAAG+SP  MG  VV+FRRSDFWDPVGFGG+L+GKKFE +V+  LP  VR FD+  +P+AVSAFDVSRL TRT+ +G IA ALRATCTFPGLF+PVWH +GVLVDGG+RDTTGMWCVP  R+DCRR+LNVTFG
Sbjct:  183 SLSAWLKEGPFVLSMSPGFFGFYAHIGALIALDNEGLLNEVSFATGASAGGLVAGLFAAGLSPTDMGDTVVKFRRSDFWDPVGFGGLLRGKKFEDIVKGTLPGGVRRFDQGRIPLAVSAFDVSRLTTRTLDEGCIAQALRATCTFPGLFSPVWHDRGVLVDGGVRDTTGMWCVPEERQDCRRILNVTFG 371
[Close]
BLAST of mRNA_D-dudresnayi_contig9580.28368.1 vs. uniprot
Match: A0A835YR40_9STRA (Phospholipase A(2) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR40_9STRA)

HSP 1 Score: 243 bits (619), Expect = 2.510e-66
Identity = 111/192 (57.81%), Postives = 147/192 (76.56%), Query Frame = 2 
Query:  965 PTLSEWL-KQGPFVLSMAPGFFGFYAHVGALMALEDEDLLEG-VSYATGASAGGLVAGLFAAGVSPGTMGKKVVRFRRSDFWDPVGFGGMLKGKKFEGLVESCLPESVRHFDECPVPMAVSAFDVSRLATRTVTQGDIAPALRATCTFPGLFAPVWHPQGVLVDGGIRDTTGMWCVPSGREDCRRVLNVTFG 1534
            P+L++WL +Q  + L +APGFFGFYAH+G L AL++  LLEG VS+ +GASAG LV GL+AAG++P  M ++VV ++R DFWDP G G ML+G+ FEGL+ S LPE V  FD+C +P+ V+ + +SR  TR + +GDIA ALRA+CTFP LF PVWHPQGVL+DGG+ DT GMW +PS  +D R +LN+TFG
Sbjct:   26 PSLAQWLAQQSKYALGLAPGFFGFYAHIGVLKALDEAGLLEGKVSFVSGASAGALVGGLYAAGLTPSEMAQRVVAYQRGDFWDPPGVGAMLRGRAFEGLIRSSLPEGVTTFDQCRLPLGVTGYSLSRFTTRVIQEGDIALALRASCTFPVLFQPVWHPQGVLMDGGVFDTAGMWSIPSNGDDYRCILNITFG 217
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BLAST of mRNA_D-dudresnayi_contig9580.28368.1 vs. uniprot
Match: A0A0S8EUV8_9GAMM (PNPLA domain-containing protein n=1 Tax=Gammaproteobacteria bacterium SG8_31 TaxID=1703405 RepID=A0A0S8EUV8_9GAMM)

HSP 1 Score: 159 bits (403), Expect = 9.440e-42
Identity = 80/178 (44.94%), Postives = 113/178 (63.48%), Query Frame = 2 
Query:  968 TLSEWLKQGPFVLSMAPGFFGFYAHVGALMALEDEDLLEGVSYATGASAGGLVAGLFAAGVSPGTMGKKVVRFRRSDFWDPVGFGGMLKGKKFEGLVESCLPESVRHFDECPVPMAVSAFDVSRLATRTVTQGDIAPALRATCTFPGLFAPVWHPQGVLVDGGIRDTTGMWCVPSGRE 1501
            TL  WL + PF L ++ GFF F+AH G L AL +E L+      +G+SAG L  GL+AAG+ P  + +  V  R+ DFWDP    G+L+G++F  L+ S +P  V+  + C   ++VSAFD+ RL TR +T GD+A +L A+C  PG+F P+WH  G+L+DGGIRD  G+  VP G  
Sbjct:    6 TLRSWLGKEPFTLGLSSGFFSFFAHGGVLDALVEESLVPAA--VSGSSAGALTGGLWAAGLEPAEIRRLYVGLRKKDFWDPSPGPGLLRGRRFRRLIRSVIP--VQRLEHCRTRLSVSAFDLFRLRTRVMTTGDLARSLYASCAVPGMFHPLWHQGGLLLDGGIRDRPGLRGVPPGER 179
[Close]
BLAST of mRNA_D-dudresnayi_contig9580.28368.1 vs. uniprot
Match: A0A2D5EXV4_9DELT (Patatin n=2 Tax=Myxococcales TaxID=29 RepID=A0A2D5EXV4_9DELT)

HSP 1 Score: 159 bits (401), Expect = 1.390e-41
Identity = 80/175 (45.71%), Postives = 108/175 (61.71%), Query Frame = 2 
Query:  965 PTLSEWLKQGPFVLSMAPGFFGFYAHVGALMALEDEDLLEGVSYATGASAGGLVAGLFAAGVSPGTMGKKVVRFRRSDFWDPVGFGGMLKGKKFEGLVESCLPESVRHFDECPVPMAVSAFDVSRLATRTVTQGDIAPALRATCTFPGLFAPVWHPQGVLVDGGIRDTTGMWCVP 1489
            PTL EWL++ PF L ++ GFFGF+AH G +  LE+  LL   +   G+SAG LVAG +AAG+    + +  +   R DFWDP    G+L+G+ F GL+E  LP     F+EC  P+AVS FDV    TR + +G IAPA+ A+C FPG+F PVW  +   +DGGI D  G   +P
Sbjct:    4 PTLREWLREEPFTLGLSSGFFGFFAHAGFVEVLEEASLLP--ARLAGSSAGALVAGCWAAGLDAPAIARTFLELERRDFWDPAPGAGLLRGRLFRGLLEETLPRG--RFEECRRPVAVSVFDVLGRRTRVLDRGPIAPAVHASCAFPGMFQPVWIDRRPYLDGGIADRPGALALP 174
[Close]
BLAST of mRNA_D-dudresnayi_contig9580.28368.1 vs. uniprot
Match: A0A1J5D3W5_9DELT (Patatin n=2 Tax=unclassified Deltaproteobacteria TaxID=122706 RepID=A0A1J5D3W5_9DELT)

HSP 1 Score: 148 bits (373), Expect = 1.390e-37
Identity = 79/170 (46.47%), Postives = 103/170 (60.59%), Query Frame = 2 
Query:  965 PTLSEWLKQGPFVLSMAPGFFGFYAHVGALMALEDEDLLEGVSYATGASAGGLVAGLFAAGVSPGTMGKKVVRFRRSDFWDPVGFGGMLKGKKFEGLVESCLPESVRHFDECPVPMAVSAFDVSRLATRTVTQGDIAPALRATCTFPGLFAPVWHPQGVLVDGGIRDTTG 1474
            P+L EWL++ PF LS++ GFFGF+AH G L  LEDE LL       GASAGGLVAG +A GVS      ++   +R DFWDP    G+L+G+ F+ L+   L    + F++C   +AVS FDV    TR V  GD+A  +RATC  P LF PVW     ++DGG+ D  G
Sbjct:    4 PSLREWLREEPFTLSLSAGFFGFFAHCGMLSVLEDEGLLP--RRLCGASAGGLVAGAWAGGVSSEVFRDRLFSLQRRDFWDPSPGFGLLRGRLFDRLLREMLV--AQRFEDCRAELAVSVFDVWTRTTRVVNDGDLANGIRATCALPFLFQPVWLRGRPVLDGGVLDRPG 169
[Close]
BLAST of mRNA_D-dudresnayi_contig9580.28368.1 vs. uniprot
Match: A0A363UKP4_9GAMM (Patatin n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A363UKP4_9GAMM)

HSP 1 Score: 148 bits (373), Expect = 1.730e-37
Identity = 72/171 (42.11%), Postives = 113/171 (66.08%), Query Frame = 2 
Query:  965 PTLSEWLKQGPFVLSMAPGFFGFYAHVGALMALEDEDLLEGVSYATGASAGGLVAGLFAAGVSPGTMGKKVVRFRRSDFWDPVGFGGMLKGKKFEGLVESCLPESVRHFDECPVPMAVSAFDVSRLATRTVTQGDIAPALRATCTFPGLFAPVWHPQGVLVDGGIRDTTGM 1477
            PTL++WL   PF L+++ GFFGF+AH G + AL +  L    +  +G+SAG L+   +AAG+SP  + ++++   ++DFWDP    G+++GK+FE L+ES LP  V+  ++C VP+A+S +DV    TR +TQG +A A+RA+C  P +F PVW      +DGG++D  G+
Sbjct:   11 PTLADWLALEPFGLTLSSGFFGFFAHAGVVQALAERKLQP--ASLSGSSAGALIGASWAAGLSPSAIAERLLVLDKTDFWDPFPGAGLIRGKRFERLLESWLP--VQRLEDCRVPLALSVYDVFARKTRVLTQGPLARAVRASCAVPLMFHPVWIRGRAYLDGGVQDRPGL 177
[Close]
BLAST of mRNA_D-dudresnayi_contig9580.28368.1 vs. uniprot
Match: D0LWV0_HALO1 (Patatin n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) TaxID=502025 RepID=D0LWV0_HALO1)

HSP 1 Score: 145 bits (367), Expect = 7.880e-37
Identity = 76/178 (42.70%), Postives = 106/178 (59.55%), Query Frame = 2 
Query:  968 TLSEWLKQGPFVLSMAPGFFGFYAHVGALMALEDEDLLEGVSYATGASAGGLVAGLFAAGVSPGTMGKKVVRFRRSDFWDPVGFGGMLKGKKFEGLVESCLPESVRHFDECPVPMAVSAFDVSRLATRTVTQGDIAPALRATCTFPGLFAPVWHPQGVLVDGGIRDTTGMWCVPSGRE 1501
            TLS+WL + PF L+M+ GFFGF+AH G + AL +  L       TG+SAG LV GL A GV   T+  +++   R DFWDP    G+L+G+ F G++E  L    R  ++C  P+A+S FD+ R  T  V  GD+A A+ A+C  P +F PVW    +LVDGG+ D  G+  V +G  
Sbjct:    4 TLSQWLAEAPFTLTMSSGFFGFFAHTGVVSALTEAGLAP--QRITGSSAGALVGGLIAGGVPVTTIADELLALTREDFWDPRPGLGLLRGRAFRGILERMLV--ARRVEDCVTPVALSVFDLLRRETVVVQSGDLASAIHASCAVPVMFHPVWREGRMLVDGGVADRPGLAGVEAGER 177
[Close]
BLAST of mRNA_D-dudresnayi_contig9580.28368.1 vs. uniprot
Match: A0A850BBZ6_9DELT (Patatin-like phospholipase family protein n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A850BBZ6_9DELT)

HSP 1 Score: 146 bits (368), Expect = 8.490e-37
Identity = 79/178 (44.38%), Postives = 110/178 (61.80%), Query Frame = 2 
Query:  965 PTLSEWLKQGPFVLSMAPGFFGFYAHVGALMALEDEDLLEGVSYATGASAGGLVAGLFAAGVSPGTMGKKVVRFRRSDFWDPVGFG-GMLKGKKFEGLVESCLPESVRHFDECPVPMAVSAFDVSRLATRTVTQGDIAPALRATCTFPGLFAPVWHPQGVLVDGGIRDTTGMWCVPSG 1495
            PTL EWL++ PF L ++ GFFGF+AH G +  LE+E LL   +   G+SAG LVAG +AAGVS   +  +++  +R  FWDP GFG G+L+G+ F   + + LP     FDEC  P+A+S +DV +  TR +T G +  A+ A+C  P LF P W     L+DGGI D  G+  +P G
Sbjct:    5 PTLREWLRERPFALGLSSGFFGFFAHTGVMTVLEEEGLLP--ARLAGSSAGALVAGAWAAGVSATDLRDELLALKREHFWDP-GFGLGLLRGELFRQKLGALLPAQT--FDECRAPVAISVYDVLQARTRVLTAGRLVHAICASCAVPLLFQPAWVDGRPLLDGGILDRPGITGIPEG 177
[Close]
BLAST of mRNA_D-dudresnayi_contig9580.28368.1 vs. uniprot
Match: A0A2E3NVP5_9GAMM (Patatin n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A2E3NVP5_9GAMM)

HSP 1 Score: 145 bits (367), Expect = 1.090e-36
Identity = 77/185 (41.62%), Postives = 113/185 (61.08%), Query Frame = 2 
Query:  965 PTLSEWLKQGPFVLSMAPGFFGFYAHVGALMALEDEDLLEGVSYATGASAGGLVAGLFAAGVSPGTMGKKVVRFRRSDFWDPVGFGGMLKGKKFEGLVESCLPESVRHFDECPVPMAVSAFDVSRLATRTVTQGDIAPALRATCTFPGLFAPVWHPQGVLVDGGIRDTTGMWCVPSGREDCRRVL 1519
            PTL+ WL   PF L+++ GFFGF+AH G + AL +  L    +  +G+SAG L+   +AAG+SP  +  +++  ++ DFWDP    G+++GK+FE L+   LP  V+ F EC VP+AVS +DV    TR +  G +APA+RA+C  P +F PVW      +DGG+ D  G+  +P     C RVL
Sbjct:    6 PTLAAWLALAPFGLTLSSGFFGFFAHAGVVHALAERHLRP--TRISGSSAGALIGASWAAGLSPSAISDRLLDIQKRDFWDPFPGPGLIRGKRFERLLNDWLP--VKAFGECRVPLAVSVYDVLGRRTRVLDSGALAPAIRASCAVPLMFHPVWMRGRPYLDGGVLDRPGLAGMP-----CDRVL 181
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9580.28368.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEM2_ECTSI5.030e-9475.66Patatin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5L0Q6_9PHAE1.080e-9175.13PNPLA domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835YR40_9STRA2.510e-6657.81Phospholipase A(2) n=1 Tax=Tribonema minus TaxID=3... [more]
A0A0S8EUV8_9GAMM9.440e-4244.94PNPLA domain-containing protein n=1 Tax=Gammaprote... [more]
A0A2D5EXV4_9DELT1.390e-4145.71Patatin n=2 Tax=Myxococcales TaxID=29 RepID=A0A2D5... [more]
A0A1J5D3W5_9DELT1.390e-3746.47Patatin n=2 Tax=unclassified Deltaproteobacteria T... [more]
A0A363UKP4_9GAMM1.730e-3742.11Patatin n=2 Tax=Gammaproteobacteria TaxID=1236 Rep... [more]
D0LWV0_HALO17.880e-3742.70Patatin n=1 Tax=Haliangium ochraceum (strain DSM 1... [more]
A0A850BBZ6_9DELT8.490e-3744.38Patatin-like phospholipase family protein n=1 Tax=... [more]
A0A2E3NVP5_9GAMM1.090e-3641.62Patatin n=1 Tax=Xanthomonadales bacterium TaxID=20... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9580contigD-dudresnayi_contig9580:689..7857 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score307.8
Seed ortholog evalue8.4e-81
Seed eggNOG ortholog2880.D8LEM2
EggNOG OGs2D447@1,2STTJ@2759
Ec32 ortholog descriptionAcyl transferase/acyl hydrolase/lysophospholipase
Ec32 orthologEc-23_002490.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size1535
Cds size1326
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930906.6175504-UTR-D-dudresnayi_contig9580:688..8791622930906.6175504-UTR-D-dudresnayi_contig9580:688..879Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9580 689..879 +
1690557960.6647012-UTR-D-dudresnayi_contig9580:688..8791690557960.6647012-UTR-D-dudresnayi_contig9580:688..879Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9580 689..879 +
1622930906.6390524-UTR-D-dudresnayi_contig9580:3251..32681622930906.6390524-UTR-D-dudresnayi_contig9580:3251..3268Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9580 3252..3268 +
1690557960.676221-UTR-D-dudresnayi_contig9580:3251..32681690557960.676221-UTR-D-dudresnayi_contig9580:3251..3268Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9580 3252..3268 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930906.6582592-CDS-D-dudresnayi_contig9580:3268..40511622930906.6582592-CDS-D-dudresnayi_contig9580:3268..4051Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9580 3269..4051 +
1690557960.6860924-CDS-D-dudresnayi_contig9580:3268..40511690557960.6860924-CDS-D-dudresnayi_contig9580:3268..4051Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9580 3269..4051 +
1622930906.6750102-CDS-D-dudresnayi_contig9580:4994..50901622930906.6750102-CDS-D-dudresnayi_contig9580:4994..5090Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9580 4995..5090 +
1690557960.7010963-CDS-D-dudresnayi_contig9580:4994..50901690557960.7010963-CDS-D-dudresnayi_contig9580:4994..5090Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9580 4995..5090 +
1622930906.6881106-CDS-D-dudresnayi_contig9580:6071..62331622930906.6881106-CDS-D-dudresnayi_contig9580:6071..6233Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9580 6072..6233 +
1690557960.7166429-CDS-D-dudresnayi_contig9580:6071..62331690557960.7166429-CDS-D-dudresnayi_contig9580:6071..6233Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9580 6072..6233 +
1622930906.734123-CDS-D-dudresnayi_contig9580:6855..70781622930906.734123-CDS-D-dudresnayi_contig9580:6855..7078Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9580 6856..7078 +
1690557960.7274075-CDS-D-dudresnayi_contig9580:6855..70781690557960.7274075-CDS-D-dudresnayi_contig9580:6855..7078Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9580 6856..7078 +
1622930906.7511122-CDS-D-dudresnayi_contig9580:7795..78571622930906.7511122-CDS-D-dudresnayi_contig9580:7795..7857Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9580 7796..7857 +
1690557960.738001-CDS-D-dudresnayi_contig9580:7795..78571690557960.738001-CDS-D-dudresnayi_contig9580:7795..7857Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9580 7796..7857 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9580.28368.1prot_D-dudresnayi_contig9580.28368.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9580 3269..7857 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9580.28368.1

>prot_D-dudresnayi_contig9580.28368.1 ID=prot_D-dudresnayi_contig9580.28368.1|Name=mRNA_D-dudresnayi_contig9580.28368.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=442bp
MSERHEPTQRPALPTTPTAMEEVQGDGDAGQNTRSGWLFPSSAPIGPASV
TPTASSSPTDPTTAVATTTSPWTDPVTAAMAATPSWTNPGPAVTATSPSR
ASPMTAVSTATSSRTNLSTVETSTAFPQDNPAKAVSTTNISRTNNLATPA
TTAESSPADPATSTTTTDSARTDPTTAATISMMVEDDGHHEHGFAGARSD
ESAFEGAGVDESSKGDSEEGTPSCNASVSTTIATTSSASDGSDDAGPSKP
SRPTLSEWLKQGPFVLSMAPGFFGFYAHVGALMALEDEDLLEGVSYATGA
SAGGLVAGLFAAGVSPGTMGKKVVRFRRSDFWDPVGFGGMLKGKKFEGLV
ESCLPESVRHFDECPVPMAVSAFDVSRLATRTVTQGDIAPALRATCTFPG
LFAPVWHPQGVLVDGGIRDTTGMWCVPSGREDCRRVLNVTFG
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mRNA from alignment at D-dudresnayi_contig9580:689..7857+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9580.28368.1 ID=mRNA_D-dudresnayi_contig9580.28368.1|Name=mRNA_D-dudresnayi_contig9580.28368.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=7169bp|location=Sequence derived from alignment at D-dudresnayi_contig9580:689..7857+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGTTTCTCGCGCAAAAAGCATGCCTTGGTCTTGCGTGCCACGGACAGCT
GCTTTGCTTGCTCCTCATTTGCTCCTGGCAGTCGGCGCTATTTTCGCAGA
TGAGAAGAGCACCAGGCCAAACTTTGGAGCAGTGGCAAAAGAGAACAGAG
GGCAAGCTCTTCTTGGTCTGGTTCTAACTACCTAGCTTCAGGTGTGTCAC
CAATAAGATAACCTTCGCGGGACTGTTGTTTGTCTGCTGAGCTGCGAGCG
AGGAATTTATTAGGCATGACAAGCATCATTGGATGTTGATCTGTCGTCCC
AATTTTTTGCCGTGACTACTCGTATACTATCAATAGCGTCGCCCAGGCGA
GCCTAGTAGCGTAGAAGAACCGAGATCCACCCGGTAGACGTCCGTCATAG
ACAAGAGTATCGCGGTTCCAAACGTGGAGAAGCGCGCAATCCCCAACAAT
CCCCTCTTGAATCTATGGCACACACAAGCAACACAACAACAGCAGTCAGT
AGGTGGTACGATACTGTACAAGGCGAGGGGGTCGTAGAGCCACAGCTCAT
CTCGTTATCATACATTACTGCGAAGAATGTTATACGAAGCGTTGGGTAAG
GTCCCTGCATCCCAGCAGCAGCAAAAGATAGAATCTACTGCCGACCGCCA
CTTCTCTATCTTGACCCATAGACTATCGCTTCGCTGCACATTTATTCCCA
TTTCGCTTCAATTATCGCTGCAATTATTCGCGGAGCTCGGCTGCCACGAC
ATCGACGATTCGACTCTATCTGTGGAGATGACCTTTGTAAGGGGTAAAAT
CTCACAACGTCTGTCGATGACAAAGCCCTATTTTCTATTTTCACATTGGC
GCCGTCGATGAGAAATCTGACTTAGGTTGGCAAAAGACCCGGGTTCGAAT
CCGGCCACCCACCGAAAAAAAAGGGTGAACCAAAAGTATGATACTCGAAC
TGATGAAACTTCTGATGACGTGGTGGACGTAGCAAAACCACATAACACGC
ACTGAGGATTGTGAAGAAAAAGGGGATGTTTCGCCGCCAGCCGGTCGGGT
TCTGGTTACCCCTAGAACACTTCTTGTCAATGAACAAAAGCCTCATAAAG
GGGGGGGTAATGTGGAGATGACCTTTGTAAGGGGTAAATCCCACAACGTC
TGTCGAGGACAAAGCCCTACGTTCACATATCTCCTTAAATAAAATAAAAC
TGTCTGTCTGTCTGTCTATCGCACTAACTACTTGGATAAAGTTTTGATTT
TCGTCACTTTTCCGTCCCCGGCCCCCGAAACTCGGAAAACCACTTGGACA
GAGCATGGGCCGAAAACGCCCCCCATGATTCGGGAACCCCGCCAAACCGT
CCCCGGGGTCCCGGGACTGTTAAAAACAATTGAATAGAGTGGCGGTCGAA
AACGCCTCCCACGAATCGGGATCCCCGCCAACCCGGGGACGAAACGAGAC
CATCCCCGGGTCACAAGCGCCTTCCACGATTCGGGAACTCCGTCAAAACC
GGGGCCCGAAAGGCCAAATCCCCAGGTCAAAAACGCCTTCCGTGGTGGGG
AAACCCCGCAAACAACAAAAAAGGGCCAAACCTGGGGACGAAACACGACC
ATCGCCGGGTCAAAAACGCCCTCCATGGTGGGAATACCCCACAAAAAAGA
AGAAAAGAAAGCCATATCCGGGGACAAAACGAGACCATCCTCGGGGTCGA
ATCAACTCCACCGCACCCGGGGACGGAAGTTCAGGGTCACAAACGCAATC
CATGGTGGGGAAACCCCGCCAAAAAACAAACAACGCCAATCCTTTGATGT
CTGTCTGGTGTCTGGTAGGGTCTGACACAAACTACTTGAAGAAACGACGG
TTTTAGGTCAGTTCAGCCGTTGGGTGTTGGGTTGTGTTTTGTCGGTCGGT
CGGTCGGTCGGTCGTGAGGCCGCGGGACCGACCGACCGACCGACCGACCG
AACGAACGACCGAACGACCGAACGACCGACCGATCCAACCCAACCCAAAC
CAAACCAACCCAACGCGCTTGTAATCTATACGACGGAACAGTACCCTACT
GTACCAGTAGTAGTATAGCAGTATTTCTCGTATAATATGAAACGATGTTT
TCTTTTCCTCGGGCGGACGGATAAAACTATAGCTTCAGCTCCCAACCTCA
CACAGCCATGATAGTTGTTTCTGAGTAACAGGCGTCGTAGTACGAGTACA
GTATCATAGTAAAACACAACATTGCCAACATTGTCATAGCAGCACGGGTA
CGTCGGGCGGCCTTCTGCTCCTATTAGAGTATCAAGCACGACACACACGG
TTGCCTTGTGTTGAGCGTATGGTAGATTGCATCATATCGTGGCATGGTGC
CCCCATTATGTGCGAGTATGATATCGCACAAGTATAGCAGCACAACGGCA
GCGTGTCCAACCACGAAAACGATTTCCAATTCATCCAACAGTACTATTTT
TCCTTTCATGCTCGTGTTTCGGCGTCTCGTGTCGTACGCCCCGCAACGAT
GTTGATGTGTTTCTCTGTGACCACGAACCATGCGTGATGCCACCGCCCTC
GAAATTACAACAGCGCCATCGCGAGTGATCATGTCGGAACGTCATGAACC
AACACAGCGACCAGCATTGCCGACTACGCCAACAGCAATGGAAGAGGTGC
AAGGCGACGGCGATGCCGGACAAAATACGCGATCTGGGTGGTTGTTTCCT
TCTTCTGCGCCGATTGGTCCAGCATCCGTAACACCGACTGCAAGTTCTTC
ACCAACCGATCCCACGACAGCAGTAGCGACCACAACTTCTCCATGGACGG
ACCCCGTGACCGCAGCAATGGCCGCTACTCCTTCGTGGACCAATCCCGGG
CCAGCAGTAACGGCCACAAGTCCTTCACGGGCCAGTCCCATGACGGCGGT
ATCAACCGCAACCTCTTCACGGACCAATCTCTCGACAGTCGAAACGAGCA
CTGCTTTTCCGCAGGACAATCCCGCGAAGGCAGTATCGACCACCAATATT
TCACGGACCAACAACCTAGCGACACCGGCAACGACCGCAGAATCTTCGCC
CGCAGATCCCGCGACATCAACAACGACCACGGATTCTGCACGGACCGATC
CCACGACAGCAGCAACGATCTCAATGATGGTGGAAGACGACGGCCACCAT
GAACATGGCTTCGCTGGTGCACGTAGCGACGAATCCGCTTTTGAGGGCGC
CGGTGTCGATGAATCGAGCAAGGGCGACTCGGAGGAAGGAACGCCGTCAT
GTAATGCTTCGGTCAGCACGACCATCGCAACGACCAGCAGCGCCAGTGAT
GGGTCTGATGATGCGGGACCGTCCAAGCCATCTCGTCCGACTCTGTCGGA
GTGGCTGAAACAGGTGAAGATAATAAAAACAAAAGGAAGAATATTTGAGC
CGATTGTACTTGCACGTTGTAACAGGTGCGGCACAGGCATACCAACGAGG
AAATCGCGTACGATCGTATTACGTTCGTGCGTCGTTCGCCTGTCATATGA
TACTTTTCATACGTGAGTACCTTTTTTTAGTTGTCGACTTACTTTTGAAG
CCGACTATAAATCTACAAGCAAGATGCTAATACCACTCTTGCGACATTGG
CATGGCCTGTCTTGACGTGAACGGACCATTTTTGAAACGTGCACTATCAT
ACAACAGTTACCTTGTATCTCACCCCCGAAGCATGCGGCGGGACCAAACC
TTGAGACCTTGAAAATCGTAAACCCCGAAGCACTATGAGCGCAACAGCAA
AAGAGGCTCCGGTTTGAAACGGGGCTGCAACGAGGCGCACGGCCAGCCGA
GATTTCTAACTCCGCTGCCTCTCCGGGCGGCTACCTTCAAGGCCTATGGC
CTCCGAAATTCTCGTGCTCATATGGTAATTGGTTGTGTTCTACAATCAGG
AGATTGAATCGGCAATATAAAACGGTAAAAAAGCCTTTGAAAACACAAGA
GAAAACCTTAAAAAAGCTTAATAAAACTAAAAAACGTGTAAAATTGTGTA
AGAGTGAAGCTGTAATTTGACCCATCCGCCGGAGGATAACAATGGTTGAA
CATATATATACTTCGAAGTCGTCTATACATGTAGCTCCGCTTTGTAAAGA
TCACACATAAGCTGCCCTTTGATGGCTTTTGGAGAGCCGTACGGTGACGT
TGGGGCCTCCCGTGTGTTTTTTTGGGAGGGGGGTGCTCGTTGTCCGGGCT
GTGGTGGATACGCGCGTGCAGGGGCCCGCCACTGCATTGATGCATACCTT
TTCCCGCTCACGCTGTGTCTGCTATGATATGTACCTTTTTTTTTTTTGGC
ATCCAGGGGCCTTTCGTCTTGTCCATGGCGCCCGGCTTCTTCGGATTTTA
TGCTCATGTTGGAGCTCTCATGGCCCTCGAAGACGAGGATCTTCTGGAAG
GGGTAGGTGATTAGTCGGCGCAGGATCTTGGGTGTATGTACGAGTACTGT
GAAGTAGAAGGCGCGTTTTCGAAAACCAAAGTAAAAGACATACGAGAGCG
GTCGCGAAATAGTTAGCGGTTCGTCAAAGGGACGGAAGAGCTTAGGCGGC
AGGGATAGCCGCGTGCGTGTATTTGTTGGTTTGGTCGGTGATGGGACATG
ACCTATCTGCATGTTCTTTTGTTTTACTGCCCCCCCCCCCCCCCCCCCCC
CCCCGCCTCCTTCATCCGCCTTTTCTCTCTTCTTGTTCTTTGCTGTCTGT
CTTGCTNNNNNNNNNNGGGGTGGCTGGTACCTCCTCGTTTTTTTTTTTTT
TTTTTCCCCCCCCCCCCCCCCCCCCCCCCAACTATTTGGTGTGCACCTTG
TTGATGCGTGCTATCCTGTCTGTCTTGCTCCGGCGTTAACTGCGTATGCG
CAGTAGGTTCAGAGTTTTATAGGATGTCTCTTTAGAAAGGGTTTTACTCT
CTATTACTATAGTGTGTTGCGTTAGGGTTCAGGTTAGGGTTAGTGTTAGG
ATTTTCCGAACTGCTGAACAGCCCACGTTGTTACTAATCATACATCATAC
ATCTAATAAAACGAATCTCCTAAATATGCAATCTACAAAAACAAAACAAT
GGTTGAGGCGGCTCCGTGTTCGTGCCGCTTTCGTACATGGCGTGTTGAAC
ACTTTTTTGACACGTACCACGGCGGCGTTCTTGTATTATGCGTTACCCCC
CCCCCTCCCCCCTCCCTCGAGTCCCCGAGTGTGCTCCCTTTCACCACAGT
GCCGGGAACCTGCGTTACGACCGCTTTCAGCTGTCACGCGCCCCTCCCAC
GCTGTCCTGTATTCCGTTACATGTCCATTTATTATACATACATGGAACAC
ACACTCGGCATGCGTTGCTTGCCTACGATATTACGTTTGGATATAATTCC
TCCTTTTAAACTCGACGCCACTCTGCGCAACAGGTGAGCTACGCGACGGG
GGCGAGCGCGGGCGGGTTGGTGGCTGGGCTCTTCGCCGCGGGTGTCTCTC
CTGGGACCATGGGCAAGAAGGTCGTGAGATTTCGAAGGTCTGACTTTTGG
GACCCGGTCGGCTTTGGAGGGATGCTCAAGGGCAAGAAGTTCGAGGTGAT
TCTATTTTTTTTCAAGGTCGAATGGAGTGTGTCAATCGTTGGATTATAAT
GGAGCAGCTGCGGTCTGGGCGGAGGTACCTTGTTGTTATTTGCCGATTAT
CCGGGCCTAGAAGAGCAGCATGGAGCGACCAACTAAGTATTCAGCTGATG
ACAAGGAAAACAATGATATGGTGCCGGTCCATGTTGGTGCCGTCGGTTGT
TGCTTGAGGTGACGATCTTTTTAGCGCGCTTTTTGTAAAATGTTGGCGTT
TCGCGAATTGGAAATCAGAGTAGTTGACGGTTTCGCTCATTATTTATTTG
GATCATGCGACAGAGAAGAACGTATGTGATCGTAACAACGTAGGGTAACT
GGCGGCTCCAGTTATCTGTCATGGTCGATGGTCGGTGATGAGGATCCTTG
CCGTTCCCGTGATGTCGTCGTACCGTTCTTGCCCGGTCAAACCATCAATT
TCCACGCATTCCGAAGCAACGCGATACCGGGCATACAGCTAACCCTTACC
GGGCGCGCGTCGCGGACAAGACAATTTGACTACAGTAAAAGAGCCCCGAC
TAACCAATAGGTACCCTTTTGTATCCTTTTTTTTATTTCTTTGGTGGTGG
CTAACACACATTTATAGGGTTTGGTGGAGTCCTGTCTACCCGAAAGCGTG
CGGCACTTCGATGAGTGTCCGGTCCCGATGGCGGTGTCGGCCTTTGATGT
GTCTCGACTCGCCACGAGAACAGTGACTCAGGGAGACATCGCTCCCGCCC
TGAGAGCGACCTGCACTTTTCCGGGCCTCTTCGCGCCCGTGTGGCATCCT
CAGGGCGTGCTGGTGGACGGCGGGATAAGGGATACGACGGGTAAGACATA
GGATACAACCCGTTACGGTTGCTGTGGTAGTTGCTTCCTTGCTGCGCTGC
CGTGGAATGCGCTCGTCGGAAAGGGGGGGGGAGAGGGGGTGGGGGGTAGC
CACGGTGATGTGGTCATTGTCGTGGTTGTGGCAATCTAAACAAGGCGTTT
TTGCAGAGAGAGTGTGCAGCCGTGGTCATCATATAACAGTGTGATATTCA
CTGTCGTTGATGAGCCCTCTCAGCTCGTTTTGTGGAGATGCGTGGATGGA
GTTTGCGGGATGGTGCTTGTTGTGCCTTGCTGAGCGCGTATTGATTTGCA
CGCATGCTGCGCTGTGCACGAATGTTGGGGTAATATACTTCGCGCGGTTA
GACTCCGATGGTGCCTTTTCGCTGGACGTTCCCCCACTCCTGAGTAGATT
GTGGCGATATATTAAAGTATCCCGTTGCGTGTAACGCGTTTTGTCCGAAC
GCTTGAATCACGCCGCATACCATGGGTTGTTTCGCTTTCTTGTATATCGA
CTAAGCGACCGACCGACCGACCGACTGACCGGTACTGCAAAGGCAGGAAG
CGTCGACAAACGAGCACCAGGCAAATCATGCACGAAATGGTTCCGTACTG
GAGCATCATGACATGGACACACCAACTTCCCATCTTATCTTTCTCCCCCC
GTTTCACCGCTGTAACGCAAAATCCCGTCGTCAAAACCCGTGCCCCGTGG
GATTAAGGGATGTGGTGCGTGCCTTCTGGGCGGGAGGACTGCCGTCGCGT
TCTGAACGTGACCTTCGGA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9580:689..7857+

>mRNA_D-dudresnayi_contig9580.28368.1 ID=mRNA_D-dudresnayi_contig9580.28368.1|Name=mRNA_D-dudresnayi_contig9580.28368.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2652bp|location=Sequence derived from alignment at D-dudresnayi_contig9580:689..7857+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGTCGGAACGTCATGAACCAACACAGCGACCAGCATTGCCGACTACGCC
AACAGCAATGGAAGAGGTGCAAGGCGACGGCGATGCCGGACAAAATACGC
GATCTGGGTGGTTGTTTCCTTCTTCTGCGCCGATTGGTCCAGCATCCGTA
ACACCGACTGCAAGTTCTTCACCAACCGATCCCACGACAGCAGTAGCGAC
CACAACTTCTCCATGGACGGACCCCGTGACCGCAGCAATGGCCGCTACTC
CTTCGTGGACCAATCCCGGGCCAGCAGTAACGGCCACAAGTCCTTCACGG
GCCAGTCCCATGACGGCGGTATCAACCGCAACCTCTTCACGGACCAATCT
CTCGACAGTCGAAACGAGCACTGCTTTTCCGCAGGACAATCCCGCGAAGG
CAGTATCGACCACCAATATTTCACGGACCAACAACCTAGCGACACCGGCA
ACGACCGCAGAATCTTCGCCCGCAGATCCCGCGACATCAACAACGACCAC
GGATTCTGCACGGACCGATCCCACGACAGCAGCAACGATCTCAATGATGG
TGGAAGACGACGGCCACCATGAACATGGCTTCGCTGGTGCACGTAGCGAC
GAATCCGCTTTTGAGGGCGCCGGTGTCGATGAATCGAGCAAGGGCGACTC
GGAGGAAGGAACGCCGTCATGTAATGCTTCGGTCAGCACGACCATCGCAA
CGACCAGCAGCGCCAGTGATGGGTCTGATGATGCGGGACCGTCCAAGCCA
TCTCGTCCGACTCTGTCGGAGTGGCTGAAACAGATGTCGGAACGTCATGA
ACCAACACAGCGACCAGCATTGCCGACTACGCCAACAGCAATGGAAGAGG
TGCAAGGCGACGGCGATGCCGGACAAAATACGCGATCTGGGTGGTTGTTT
CCTTCTTCTGCGCCGATTGGTCCAGCATCCGTAACACCGACTGCAAGTTC
TTCACCAACCGATCCCACGACAGCAGTAGCGACCACAACTTCTCCATGGA
CGGACCCCGTGACCGCAGCAATGGCCGCTACTCCTTCGTGGACCAATCCC
GGGCCAGCAGTAACGGCCACAAGTCCTTCACGGGCCAGTCCCATGACGGC
GGTATCAACCGCAACCTCTTCACGGACCAATCTCTCGACAGTCGAAACGA
GCACTGCTTTTCCGCAGGACAATCCCGCGAAGGCAGTATCGACCACCAAT
ATTTCACGGACCAACAACCTAGCGACACCGGCAACGACCGCAGAATCTTC
GCCCGCAGATCCCGCGACATCAACAACGACCACGGATTCTGCACGGACCG
ATCCCACGACAGCAGCAACGATCTCAATGATGGTGGAAGACGACGGCCAC
CATGAACATGGCTTCGCTGGTGCACGTAGCGACGAATCCGCTTTTGAGGG
CGCCGGTGTCGATGAATCGAGCAAGGGCGACTCGGAGGAAGGAACGCCGT
CATGTAATGCTTCGGTCAGCACGACCATCGCAACGACCAGCAGCGCCAGT
GATGGGTCTGATGATGCGGGACCGTCCAAGCCATCTCGTCCGACTCTGTC
GGAGTGGCTGAAACAGGGGCCTTTCGTCTTGTCCATGGCGCCCGGCTTCT
TCGGATTTTATGCTCATGTTGGAGCTCTCATGGCCCTCGAAGACGAGGAT
CTTCTGGAAGGGGGGCCTTTCGTCTTGTCCATGGCGCCCGGCTTCTTCGG
ATTTTATGCTCATGTTGGAGCTCTCATGGCCCTCGAAGACGAGGATCTTC
TGGAAGGGGTGAGCTACGCGACGGGGGCGAGCGCGGGCGGGTTGGTGGCT
GGGCTCTTCGCCGCGGGTGTCTCTCCTGGGACCATGGGCAAGAAGGTCGT
GAGATTTCGAAGGTCTGACTTTTGGGACCCGGTCGGCTTTGGAGGGATGC
TCAAGGGCAAGAAGTTCGAGGTGAGCTACGCGACGGGGGCGAGCGCGGGC
GGGTTGGTGGCTGGGCTCTTCGCCGCGGGTGTCTCTCCTGGGACCATGGG
CAAGAAGGTCGTGAGATTTCGAAGGTCTGACTTTTGGGACCCGGTCGGCT
TTGGAGGGATGCTCAAGGGCAAGAAGTTCGAGGGTTTGGTGGAGTCCTGT
CTACCCGAAAGCGTGCGGCACTTCGATGAGTGTCCGGTCCCGATGGCGGT
GTCGGCCTTTGATGTGTCTCGACTCGCCACGAGAACAGTGACTCAGGGAG
ACATCGCTCCCGCCCTGAGAGCGACCTGCACTTTTCCGGGCCTCTTCGCG
CCCGTGTGGCATCCTCAGGGCGTGCTGGTGGACGGCGGGATAAGGGATAC
GACGGGGTTTGGTGGAGTCCTGTCTACCCGAAAGCGTGCGGCACTTCGAT
GAGTGTCCGGTCCCGATGGCGGTGTCGGCCTTTGATGTGTCTCGACTCGC
CACGAGAACAGTGACTCAGGGAGACATCGCTCCCGCCCTGAGAGCGACCT
GCACTTTTCCGGGCCTCTTCGCGCCCGTGTGGCATCCTCAGGGCGTGCTG
GTGGACGGCGGGATAAGGGATACGACGGGGATGTGGTGCGTGCCTTCTGG
GCGGGAGGACTGCCGTCGCGTTCTGAACGTGACCTTCGGAGGATGTGGTG
CGTGCCTTCTGGGCGGGAGGACTGCCGTCGCGTTCTGAACGTGACCTTCG
GA
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