mRNA_D-dudresnayi_contig9577.28366.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig9577.28366.1 vs. uniprot
Match: A0A6H5KFA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFA2_9PHAE) HSP 1 Score: 261 bits (668), Expect = 1.690e-81 Identity = 130/249 (52.21%), Postives = 168/249 (67.47%), Query Frame = 2 Query: 2 RNDLEAERKRRVHAEALIQRATPDGICVSDFPSVGEVNHHVENLATIVLRWTNKACGIAGSDPALPMTMQTILVQTFKVCNDEVKRCIANRVSSLSDFVGSKEPV--SLGGEMNLDTTYVLYECLTRNFESIVSTEPDHMGSLASDILQRCASCADERLARQMIVGDALPLFEAVIQNYIKIFIECALQNGPMLFNDDVGKKTIFDAFHHRDWAPHSAPPHGQQCCIVFPSLTQQEGRPASNAKIGVVR 742 R DLE E RRV AE L+ RA G+ DFPSV +V HV LA L WT KAC + GS PA+ T+ ++L TF VC +EV+RC+ R+ +LS F+G+ EP+ S G EMNLDT YVLYECL ++++ IV +PD M +LA +L+RC ADE LA ++I G A P FEA+++NY+ +F+E ALQ + F D++G FD+ HRDWAP+S P GQ C IVFP+L QEGRP SNAKIGVVR Sbjct: 98 RRDLETEHSRRVKAETLVHRAKGGGLRSGDFPSVRDVYQHVYQLADDALAWTEKACAVGGSHPAVNGTILSVLYNTFLVCREEVQRCLDERLQNLSAFLGNDEPILLSAGDEMNLDTQYVLYECLCKDYQRIVPADPDRMNALAGVVLRRCEEPADESLANEIISGPAWPSFEALMKNYLMVFVEMALQKPRVEFEDNLGDAVTFDSVVHRDWAPYSKAPAGQSCSIVFPALRPQEGRPMSNAKIGVVR 346
BLAST of mRNA_D-dudresnayi_contig9577.28366.1 vs. uniprot
Match: D7FSP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP0_ECTSI) HSP 1 Score: 258 bits (660), Expect = 3.160e-78 Identity = 128/249 (51.41%), Postives = 166/249 (66.67%), Query Frame = 2 Query: 2 RNDLEAERKRRVHAEALIQRATPDGICVSDFPSVGEVNHHVENLATIVLRWTNKACGIAGSDPALPMTMQTILVQTFKVCNDEVKRCIANRVSSLSDFVGSKEPV--SLGGEMNLDTTYVLYECLTRNFESIVSTEPDHMGSLASDILQRCASCADERLARQMIVGDALPLFEAVIQNYIKIFIECALQNGPMLFNDDVGKKTIFDAFHHRDWAPHSAPPHGQQCCIVFPSLTQQEGRPASNAKIGVVR 742 R DLE E RRV AE L+ RA G+ DFPSV +V HV LA L WT KAC + GS PAL T+ ++L TF VC +EV+RC+ R+ +LS F+G+ EP+ S G EMNLDT YVLYECL ++++ IV +PD M +LA +LQRC AD LA +++ G P FEA+++NY+ +F+E ALQ + F D++G FD+ HRDWAP+S P GQ C IVFP++ QEGRP SNAKIGVVR Sbjct: 268 RRDLETEHTRRVKAETLVHRAKGGGLRSGDFPSVRDVYQHVYQLADDALAWTEKACAVGGSHPALNGTVLSVLYNTFLVCREEVQRCLDERLQNLSAFLGNDEPILLSAGDEMNLDTQYVLYECLCKDYQRIVPADPDRMDALAGVVLQRCGEPADRSLANEILSGATWPSFEALMKNYLLVFVEMALQKPRVEFEDNLGDAMTFDSIIHRDWAPYSKAPAGQSCSIVFPAIRPQEGRPTSNAKIGVVR 516
BLAST of mRNA_D-dudresnayi_contig9577.28366.1 vs. uniprot
Match: A0A6H5KA22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA22_9PHAE) HSP 1 Score: 229 bits (583), Expect = 4.390e-69 Identity = 121/249 (48.59%), Postives = 155/249 (62.25%), Query Frame = 2 Query: 2 RNDLEAERKRRVHAEALIQRATPDGICVSDFPSVGEVNHHVENLATIVLRWTNKACGIAGSDPALPMTMQTILVQTFKVCNDEVKRCIANRVSSLSDFVGSKEPV--SLGGEMNLDTTYVLYECLTRNFESIVSTEPDHMGSLASDILQRCASCADERLARQMIVGDALPLFEAVIQNYIKIFIECALQNGPMLFNDDVGKKTIFDAFHHRDWAPHSAPPHGQQCCIVFPSLTQQEGRPASNAKIGVVR 742 R DLE E RRV AE LI R++ G+ FP V +V HV +LA L WT KA + GS A T +++L TF VC +EV+RC+ R+ +LS F+G+ EP+ S G E +LDT YVLYECL R + +IVSTEPD M LA ILQRC AD LA +++ G P FEA+++NY+ +F+E LQ + F D++G FD H D AP+S P Q C IVFPS+ QE P SNAKIGVVR Sbjct: 72 RRDLETEHTRRVKAETLIHRSSGGGLRPGAFPGVRDVYQHVGHLADDALAWTEKAFAVGGSRQAWYGTTRSVLYNTFLVCREEVQRCLDERLQNLSAFLGNDEPILLSAGDEKSLDTQYVLYECLCRKYRTIVSTEPDRMDELAGLILQRCGEPADRGLANEIMSGATWPSFEALMKNYLLVFVEMTLQKPGIDFEDNLGDNVAFDPAEHCDLAPYSKAPTAQHCSIVFPSIRPQEAHPHSNAKIGVVR 320
BLAST of mRNA_D-dudresnayi_contig9577.28366.1 vs. uniprot
Match: D7FSP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP1_ECTSI) HSP 1 Score: 228 bits (580), Expect = 5.260e-68 Identity = 121/249 (48.59%), Postives = 154/249 (61.85%), Query Frame = 2 Query: 2 RNDLEAERKRRVHAEALIQRATPDGICVSDFPSVGEVNHHVENLATIVLRWTNKACGIAGSDPALPMTMQTILVQTFKVCNDEVKRCIANRVSSLSDFVGSKEPV--SLGGEMNLDTTYVLYECLTRNFESIVSTEPDHMGSLASDILQRCASCADERLARQMIVGDALPLFEAVIQNYIKIFIECALQNGPMLFNDDVGKKTIFDAFHHRDWAPHSAPPHGQQCCIVFPSLTQQEGRPASNAKIGVVR 742 R DL+ E RRV+AE LI R++ G+ FPSVG+V HV +LA L WT KA + GS T +++L TF VC +EV+RC+ R+ LS F+G+ EP+ S G E +LD YVLYECL R + +IVSTEPD M LA ILQRC AD LA ++ G P FEA+++NY+ +F+E ALQ + F D +G FD H D AP+S P Q C IVFPS+ QE P SNAKIGVVR Sbjct: 122 RRDLDTEHTRRVNAETLIHRSSGGGLRPGVFPSVGDVYQHVGHLADDALAWTEKAFAVGGSRQTWYGTTRSVLYNTFLVCREEVQRCLDERLQILSAFLGNAEPILLSAGDEKSLDPQYVLYECLCRKYRTIVSTEPDRMDELARLILQRCGEPADRGLANEITSGATWPSFEALMKNYLLVFVEMALQKPGIDFEDSLGDNVAFDPAEHCDLAPYSRAPTAQHCSIVFPSIRPQEAHPHSNAKIGVVR 370
BLAST of mRNA_D-dudresnayi_contig9577.28366.1 vs. uniprot
Match: D7FRD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRD0_ECTSI) HSP 1 Score: 194 bits (494), Expect = 3.570e-55 Identity = 109/249 (43.78%), Postives = 154/249 (61.85%), Query Frame = 2 Query: 8 DLEAERKRRVHAEALIQRATPDGICV-SDFPSVGEVNHHVEN-LATIVLRWTNKACGIAGSDPALPMTMQTILVQTFKVCNDEVKRCIANRVSSLSDFVGSKEPVSLGGE--MNLDTTYVLYECLTRNFESIVSTEPDHMGSLASDILQRCASCADERLARQMIVGDALPLFEAVIQNYIKIFIECALQNGPMLF-NDDVGKKTIFDAFHHRDWAPHSAPPHGQQCCIVFPSLTQQEGRPASNAKIGVV 739 D+EA R++ E+L+ R+ G+ +DFPSV V +++ L LRWT K + GS L T++ +L TF VC E RC+ NR+ + ++ +G EP+SL G+ MNLDT YVLY CL RN+++IVS +P + +LA I+QRC D LA + G+A P F+A++++Y+++FI LQN PM F +DD+G T FD HR WAP S P GQQC IVFPS+ + GR + KIGVV Sbjct: 127 DMEAARRQLNAYESLVLRSEVKGVRPGNDFPSVRSVLQEIKHGLIDDALRWTEKVSTLGGSQAGLTATIRAVLEHTFHVCRKEAMRCLDNRLRAFTECLGEDEPISLSGDKSMNLDTEYVLYTCLCRNYKTIVSMKPSQVQNLAVTIVQRCKGHED--LAGSITSGNARPFFDALMKHYLQVFIVMGLQNPPMGFKDDDLGMNTTFDGSLHRYWAPCSNTPIGQQCTIVFPSIVLEGGRVNNVVKIGVV 373
BLAST of mRNA_D-dudresnayi_contig9577.28366.1 vs. uniprot
Match: A0A6H5JCP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCP3_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 2.550e-12 Identity = 54/174 (31.03%), Postives = 78/174 (44.83%), Query Frame = 2 Query: 212 TILVQTFKVCNDEVKRCIANRVSSLSDFVGSKEPVSLG---------------------------GEMNLDTTYVLYECLTRNFESIVSTEPDHMGSLASDILQRCASCADERLARQMIVGDALPLFEAVIQNYIKIFIECALQNGPMLFNDDVGKKTIFDAFHHRDWAPHSAP 652 +ILV F C EV+R + RV L FVG E V LG G M DT +LY L R +I + +L++ +L R ++ +M+V P FE V+++Y+ +F+ECALQ + F++ GK+ FD HR A SAP Sbjct: 315 SILVHLFHCCRVEVRRRLRVRVDGLRAFVGEAEFVQLGSIVSGPGTGGPKASLAAAAGAAGATPGGVMAQDTHELLYGELRRRHRTIAGLGRKDLVTLSARVLSRALKTEAKKEIGRMLVHQTWPTFEPVVRSYLALFVECALQEPQIEFDEAAGKEEPFDPEKHRPLASFSAP 488
BLAST of mRNA_D-dudresnayi_contig9577.28366.1 vs. uniprot
Match: D8LEG1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEG1_ECTSI) HSP 1 Score: 61.2 bits (147), Expect = 1.630e-7 Identity = 34/106 (32.08%), Postives = 55/106 (51.89%), Query Frame = 2 Query: 332 MNLDTTYVLYECLTRNFESIVSTEPDHMGSLASDILQRCASCADERLARQMIVGDALPLFEAVIQNYIKIFIECALQNGPMLFNDDVGKKTIFDAFHHRDWAPHSA 649 M DT +LY L R +I + +L++ +L R ++ +M+V P FE V+++Y+ +F+ECALQ + F++ GK+ FD HR A SA Sbjct: 1 MAQDTHELLYGELRRRHRTIAGLGRKDLVTLSARVLSRALKTEAKKEVGRMLVHQTWPTFEPVVRSYLALFVECALQEPQIEFDEAAGKEEPFDPEKHRPLASFSA 106 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9577.28366.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9577.28366.1 >prot_D-dudresnayi_contig9577.28366.1 ID=prot_D-dudresnayi_contig9577.28366.1|Name=mRNA_D-dudresnayi_contig9577.28366.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=187bp MTMQTILVQTFKVCNDEVKRCIANRVSSLSDFVGSKEPVSLGGEMNLDTTback to top mRNA from alignment at D-dudresnayi_contig9577:4492..7509- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig9577.28366.1 ID=mRNA_D-dudresnayi_contig9577.28366.1|Name=mRNA_D-dudresnayi_contig9577.28366.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=3018bp|location=Sequence derived from alignment at D-dudresnayi_contig9577:4492..7509- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig9577:4492..7509- >mRNA_D-dudresnayi_contig9577.28366.1 ID=mRNA_D-dudresnayi_contig9577.28366.1|Name=mRNA_D-dudresnayi_contig9577.28366.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1122bp|location=Sequence derived from alignment at D-dudresnayi_contig9577:4492..7509- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |