mRNA_D-dudresnayi_contig9573.28362.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9573.28362.1
Unique NamemRNA_D-dudresnayi_contig9573.28362.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9573.28362.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9573contigD-dudresnayi_contig9573:2955..7958 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size651
Cds size435
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9573.28362.1prot_D-dudresnayi_contig9573.28362.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9573 2955..7744 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930905.8072147-CDS-D-dudresnayi_contig9573:2954..30771622930905.8072147-CDS-D-dudresnayi_contig9573:2954..3077Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9573 2955..3077 -
1690557960.347199-CDS-D-dudresnayi_contig9573:2954..30771690557960.347199-CDS-D-dudresnayi_contig9573:2954..3077Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9573 2955..3077 -
1622930905.8229082-CDS-D-dudresnayi_contig9573:3463..36221622930905.8229082-CDS-D-dudresnayi_contig9573:3463..3622Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9573 3464..3622 -
1690557960.3598907-CDS-D-dudresnayi_contig9573:3463..36221690557960.3598907-CDS-D-dudresnayi_contig9573:3463..3622Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9573 3464..3622 -
1622930905.8439815-CDS-D-dudresnayi_contig9573:7591..77441622930905.8439815-CDS-D-dudresnayi_contig9573:7591..7744Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9573 7592..7744 -
1690557960.3687587-CDS-D-dudresnayi_contig9573:7591..77441690557960.3687587-CDS-D-dudresnayi_contig9573:7591..7744Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9573 7592..7744 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930905.865367-UTR-D-dudresnayi_contig9573:7744..79581622930905.865367-UTR-D-dudresnayi_contig9573:7744..7958Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9573 7745..7958 -
1690557960.3777065-UTR-D-dudresnayi_contig9573:7744..79581690557960.3777065-UTR-D-dudresnayi_contig9573:7744..7958Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9573 7745..7958 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9573.28362.1

>prot_D-dudresnayi_contig9573.28362.1 ID=prot_D-dudresnayi_contig9573.28362.1|Name=mRNA_D-dudresnayi_contig9573.28362.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=145bp
MQDGGGRKGTVGEGAKGAVAAGTGYKLGDRVIVVGRDGEGRKTYRTATVA
MGARGQDSGPQEETVTAVSTIKVRFTGTAKGMSDECVEIQDMIQVNEESI
RLKKEYEARRRRKPARRGRPPKSPKPSTPPLTPSTIPCAPSSAPP
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mRNA from alignment at D-dudresnayi_contig9573:2955..7958-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9573.28362.1 ID=mRNA_D-dudresnayi_contig9573.28362.1|Name=mRNA_D-dudresnayi_contig9573.28362.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=5004bp|location=Sequence derived from alignment at D-dudresnayi_contig9573:2955..7958- (Desmarestia dudresnayi DdudBR16 monoicous)
GGGTCGCAGGACGCGAGTAGACGTGACCGATATAGTGTGGGGGCTCGGCA
CTCGGCGCCCTAGCCCACCTCCCGTGACGACAGGCGCATTGTTGCAAAGG
AGATATTGTCCAATCCTCTTTGCTGGGAAGGCTGTTGGTGTTGGTTATCT
CTACTGAAGCACACGGTGCAGGTAGACGACACAAGTGGCCGCGTTTTTGA
AACATCGGCGACAGATGCAGGATGGAGGAGGGAGAAAGGGAACCGTCGGC
GAAGGGGCGAAGGGAGCAGTAGCAGCAGGGACGGGCTATAAGCTGGGAGA
CCGTGTGATCGTGGTGGGGCGAGACGGTGAAGGCAGAAAAACGTATCGCA
CAGCGACGGTAGCCATGGTGAGATTGGTGGTCCCTGCATTCTACTCTCAG
TAGTCCGTGTGGGTTGGTCTATGAAATTCCCTGGATGACTTTGAGCTTGT
GTGTGCAAATCCTTGGCAAATACGAAGAAACAGTCCCTTGTGTCTCAACA
GCCAGAGTTTAGAGGAACAAGGCACACGTTATAGTTATTGTGCACCAATC
CTTTGCATGTGGAGAGCCAGGGTTTCCTTGTATCCAGACAGGTGCGCAAG
TATATCTACTGTGGTACGTAGTGAGGGGGCGTTGTGGGATTCTGCGAGAG
CAGGAGCGCCATAGCGTCACTAGAGCCTGTATATGTGTGTCAGTTTTGAG
CTTGATTGCAAATGACGAAGTCTCGTCTCACACTCCGACGTATTATACCA
GTACGGTACGAGTACAATCTTTCAGTTTAGGCGTTCTTCTACTGTAACAG
ATTACCTCTGGGACCGTCGTGGATACCGCGAGTTGGAGCATGATTGCGCC
CGCCCGCCGCAGCCAGACAAGGTGGCTTTGTTGGCTTTCGTTACAGAGTC
GTGGGGCCTTTTGTCATGTCTGATGTATGTGTGCATTTGCGGTCCTCAAA
TCGCAAGCCAGCATGTTCTGCATCCGTACTCGTATAATATGATACATAGC
ACGAACTCCTTCGTACGGAATTGGTTTTTTCAAAATTCGCAAGCCTTCCG
TGTGCAGAATGGAAGGGAGTGTGGGCCAGGCAGGGCCAGGAAGGGTGGGG
TCTCGCTGGCTGGAAGGGCGCGAAGGACTTGAGACAGTTAGTCAGTTGCT
TCGTCCCGTCTCTGGGCATCGTGCAAACGGGAATGCGCGCCGTGTCCCCA
ATACAATATGTATCATGTCTCCCAAGTTATTATTTGGTTGTACTCGTAGC
ATGGGATCTATCATGATTGGTCAAATATTGAATGGGCCGTTATTATATAC
CCAACCACCGACGAGCAAATGTTGAATAACGCCGATATTATGTACCCAAC
CACCACAGCAACAACAGTCAGTAGTAGTGCCCCTACGCGACGAGTCGACG
TGACGAGTCGACGTAAGGCCTGTTGGAAAGATCTACCCACACGACGGCAA
CAACTCATTTTCCATGCTACTTTCTACGTACTCTGCACCGTTCACTCCGC
ACGAAACGCAACAGTTGTATAATACAAAGTCTACGACAGTACGAGTAGTA
CAGTAGTCAGTAGTATTAATAGTACTCTCTACATAGTACTCGTAGAGCTT
TTACTATAAACCAGTAGGCAACCACGGCGTTACCCGTGTAGTGTGCGCTC
GAGGGGTGGGTGAAACCCTACCCCGACCCCAACTCCAACCCTAACCCAAC
CACAGCTGCAACCCGACCCCAACCCCAACCCCAATCCCAACCCCAACCAC
CCCAACCCCACCCCAACCCCAACCTCAACCCCAACTCAGACCCTACCTCC
AACCCCACCGAAAAATGCACGGAATACCACACGCACGGACAGCTATTGCA
CACGCCAAAAACAGGCAGAACCTCGCCCGAAACGCAACCATCAAGAATAA
AAACAAGCGCAGGGTGGCGGATGAGTGCGAGCAACAACAACAGTACAGCA
GTAGTTGTACGTACTGTAGTACGTAATACGAGTAGTAAGAGAAAAACCTA
AAAAATAGCCATCATACATATACTGATGTATTAGACTATAGTATAATTGT
TATTTTTACTTACAAATACATCAGCCGTAACGTCATGTTCCAAACTGGTT
CGAGGGCCCAGGGATACTCGTCAACCTCACTGTGTGATATATCGGTCGCA
CGGAGTCTATCTATAGCGTAGACTATAGTCTATACCTGTAAAAACCGTTG
TTAGAAAAGGAGTTGAGCTCGTCAGCAGTGAGTGCGCTCCATGGTGGTGT
GTGCGTCTGAGGAGCGTGTGCTGCGTGTGTGCTGCGTGTAAAAAGTTTGA
AATACAACCCTTCTTGCGCAACAAAGACAGCGAGAAGAAAATCAATACAC
TGCAACACGAGAAACCGTTATAATCTTTGTTATTTCAGGAAGAAGCGCCA
AACATGCAGATGGAAACGACGCTTTTGAGTAAAGTAGACACCTCTTTGGT
CCCGCCGCACCATGCCTCGGGGATAGGACCTGTGTCGTTTTGTTTTGTCG
GTGAGTGCTGGCGCAAGGAGGTGGCTCTCCCTCACTACGAGAGCCGCGTA
AGTTCGGATACATGGTGATGTTGGGCCACGTGTGGTTTGACTGTATTTTT
TGGTGGTATGATACATGTTGCTACACTGTACGTTGAGCACCCCTGAGCCC
GCGGGCCGATGAGAGACCCAAACATGACAAAGCCGAACATAAATAGCGTT
AGCGTTTCGTTTATAACTCGGGCGAGGAGAGGCGTGCGGCGCTGAAACCA
CGCTACCTGTGTGCTGCATGATTGTGTGAATGGGCGTGGTGCCGGTTTGT
GGTTTGGGCGTCGTCCTTTTGTGGGTTGCTGCGTTCGTTGTTGATGAGAG
GTCATGTGACTCGAGAGACGAGCAAAAGGAATTTTCTCTTTGTCTTGAGT
TGACTGTTGCTGCCTGCTTGAAAGTTTTTGTGTGAGTGTTGCTCGCTGCT
TGGAGGCAAAAACATATGGTTTTGACTACGAGTACGTAACAAAGGTGTTA
AAAGGACGAAGAGTGACGTGATACTGAAAATCCGACGAACCTTACAGTAT
CAAGTAATTTAGACAGCAGGAGTTCGGAGCTTCGCGTTCGTACCGCTGCT
CATTGGCGCGAGTGTGATTGTACTTGTTGTGAAAACTTGATCAGGCAGAC
AGCAGCAGCGCGCGGGAAGAGGACTTCAAACAATCACGAGAGCAAGTATA
GTGACGTGCTGATGCTTCATGCAAGTAACTTCTTTGTGCGGTGGTGTGTG
CTGTGTGCTGAACCTCCTGACTGTGTTGGTTGGCGACGAATAAGTAACGC
GCACAAACTGCTGTCTACTATCATAGAAATTTTGACATTGCCTGAAATTG
CATGGTGTGGGTTTCTAGGTGCTTGTGGTGGCGGTGGCTTTGGATGCATA
CAGTAACGTATTAGGGAGATGATATATGATTATCAACTACGACGGCAACA
TCTTAGAGGCGACTACGTGTCTATATCCAAGGCAACAGCGGCCCCACGGG
AGAACGGTGTATTTCCCGCATTTCTTGTATTGAGGACAACCTCTTTGTTT
CGAGAGTCTAACCTCTAAGCCTTGGAGGTTAGGCTCTCGAGACCAACAGG
TTGTCCCCAATATAGGCTCTTTGCTCTCTGTAGCCGGCCAAGGTGAATAT
ATGCACGTGTACGGTGCAGTACCTCCTTCCATGGGGCGTATTGCTGGGTT
GTTATCTTGGATATGGACTTGTAGTCGCGCCTAAGATGTTGCCGTCGTAG
TTGACTATACCACCTTCCCGAGTATCCGGTTGTTGTGTTTTGTCGATATA
TACGTAGCTTATGATCTGATGTAGACTCATAGCTTAGGTAGAGTACCGCT
ATCATATTATACTACTGTCATGATACTATCACACACGATAACTCCCTGTT
AGTGGTGAATAGCCCGCAATGTATATGTGTGTGAGTACAACAGCATGTAG
GTATTTTGTTTTTGTGGTCAAATACATGAGCCATTTATATTTTATTTCCG
CACCTTGGACACTAGCTACAAATTTTGCATTGCAATACTTCGTATGTAGA
CTACGAGGTACTCTATAAATTGATCACGAAGGTGTTTTAATAGGAATTGT
CTGGACAATAGATTAGGGAGGGCGCATGATGACATTACAATGTAACCGAA
ACTACTACTTCGAAGTATTACTCGTACTGTGTTCAGTTCATTCGCTTCTA
TGGAGCCTACTGGCCTGCTGCTGTATGCGTTTTCGATGCATTTGTAGTAC
GATTTTGTCGAAATGGAAAGTGTTTTCATTCAAATTTCCGTGTCAACCTG
ACGACTCCCCCTATCCCGATACTGTTTTGTCTCCAGGGAGCGCGTGGACA
AGACTCGGGACCGCAAGAGGAAACGGTGACGGCTGTGTCGACCATCAAGG
TCCGCTTCACTGGCACTGCTAAGGGCATGTCGGATGAGTGCGTAGAAATA
CAGGACATGATCCAGGTTAACGAGGAGTCGATAAGGCTCAAGAAGGCAAG
TACCGGTCCGGTGGTTGTTGGGACGTGGACTTGTTGGCTAGCTCTATTGT
GGCGGCCTTGTTTTGGTCTCTCCTTTCCCCTCATTGGTCGTAGATGTTGT
TTATGTACGTGCAGACGACAATACAGGCACAACACGCGTGCGTCTCGTTG
TTATCTTTGGGAGCCCACCTAAATTCACCTCTCCGTATTATAGTATATTT
TTGCATGTGTTTGTGCCGTCCTATTTTTGTTGCCGACGTTCGTCATCCAC
AAGACAGTGTTTTGAGTATTAACTCCACGGTTCGATCGTAGCAGCTACAG
TAGTAGTAGCAGTACCTGGTATTGATTTTACCTACCCCCATGTTTTGGTG
TTGGCAATCCAATGTGTGTATGCTCTTGCAGGAGTACGAGGCGCGAAGAC
GCCGAAAACCTGCCCGAAGAGGACGTCCGCCGAAATCACCTAAGCCCTCA
ACGCCACCACTTACGCCATCGACCATCCCGTGCGCGCCGAGCAGCGCACC
CCCG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9573:2955..7958-

>mRNA_D-dudresnayi_contig9573.28362.1 ID=mRNA_D-dudresnayi_contig9573.28362.1|Name=mRNA_D-dudresnayi_contig9573.28362.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=870bp|location=Sequence derived from alignment at D-dudresnayi_contig9573:2955..7958- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGCAGGATGGAGGAGGGAGAAAGGGAACCGTCGGCGAAGGGGCGAAGGG
AGCAGTAGCAGCAGGGACGGGCTATAAGCTGGGAGACCGTGTGATCGTGG
TGGGGCGAGACGGTGAAGGCAGAAAAACGTATCGCACAGCGACGGTAGCC
ATGATGCAGGATGGAGGAGGGAGAAAGGGAACCGTCGGCGAAGGGGCGAA
GGGAGCAGTAGCAGCAGGGACGGGCTATAAGCTGGGAGACCGTGTGATCG
TGGTGGGGCGAGACGGTGAAGGCAGAAAAACGTATCGCACAGCGACGGTA
GCCATGGGAGCGCGTGGACAAGACTCGGGACCGCAAGAGGAAACGGTGAC
GGCTGTGTCGACCATCAAGGTCCGCTTCACTGGCACTGCTAAGGGCATGT
CGGATGAGTGCGTAGAAATACAGGACATGATCCAGGTTAACGAGGAGTCG
ATAAGGCTCAAGAAGGGAGCGCGTGGACAAGACTCGGGACCGCAAGAGGA
AACGGTGACGGCTGTGTCGACCATCAAGGTCCGCTTCACTGGCACTGCTA
AGGGCATGTCGGATGAGTGCGTAGAAATACAGGACATGATCCAGGTTAAC
GAGGAGTCGATAAGGCTCAAGAAGGAGTACGAGGCGCGAAGACGCCGAAA
ACCTGCCCGAAGAGGACGTCCGCCGAAATCACCTAAGCCCTCAACGCCAC
CACTTACGCCATCGACCATCCCGTGCGCGCCGAGCAGCGCACCCCCGGAG
TACGAGGCGCGAAGACGCCGAAAACCTGCCCGAAGAGGACGTCCGCCGAA
ATCACCTAAGCCCTCAACGCCACCACTTACGCCATCGACCATCCCGTGCG
CGCCGAGCAGCGCACCCCCG
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