mRNA_D-dudresnayi_contig9566.28355.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9566.28355.1
Unique NamemRNA_D-dudresnayi_contig9566.28355.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
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BLAST of mRNA_D-dudresnayi_contig9566.28355.1 vs. uniprot
Match: D7G927_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G927_ECTSI)

HSP 1 Score: 315 bits (806), Expect = 5.910e-108
Identity = 156/161 (96.89%), Postives = 160/161 (99.38%), Query Frame = 1 
Query:    1 IKEMCTFFSKTIVKRTQPGQRQSVQHEDYNVHVYMRQDGLAGTVTADLEYPPRVAFVLLTQLLDQYAEQVPWQSEIRHEAIRFPPMDKMILDFQDPAKADKITKIQRDLDETTEVLHRTIDNVLERGVRLDELVDRSDDLSRQSKMFYKQARKTNSCCVIS 483
            IKEMCTFFSKTIVKRTQPGQRQSVQHEDYNVHVYMRQDGLAGTVTADLEYPPRVAFVLLTQLL+QYAEQV WQSEIRHEAIRFPPMDKMI+D+QDPAKADKITKIQRDLDETTEVLHRTIDNVLERGVRLDELVDRSDDLSRQSKMFYKQARKTNSCCV+S
Sbjct:   38 IKEMCTFFSKTIVKRTQPGQRQSVQHEDYNVHVYMRQDGLAGTVTADLEYPPRVAFVLLTQLLEQYAEQVSWQSEIRHEAIRFPPMDKMIVDYQDPAKADKITKIQRDLDETTEVLHRTIDNVLERGVRLDELVDRSDDLSRQSKMFYKQARKTNSCCVVS 198
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BLAST of mRNA_D-dudresnayi_contig9566.28355.1 vs. uniprot
Match: A0A836CN50_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN50_9STRA)

HSP 1 Score: 257 bits (656), Expect = 4.200e-85
Identity = 123/160 (76.88%), Postives = 144/160 (90.00%), Query Frame = 1 
Query:    1 IKEMCTFFSKTIVKRTQPGQRQSVQHEDYNVHVYMRQDGLAGTVTADLEYPPRVAFVLLTQLLDQYAEQVPWQSEIRHEAIRFPPMDKMILDFQDPAKADKITKIQRDLDETTEVLHRTIDNVLERGVRLDELVDRSDDLSRQSKMFYKQARKTNSCCVI 480
            IKEMCTFFSKTIVKRT  GQRQ+VQHEDYNVHVY+R DGLA T+TAD+EYP RVAFVLL  ++DQ++EQ+ WQ+E R EAI F PM + I+D+QDPAKADKITKIQRDLD+TT VLH+TI++VLERGV+LD+LVDRSD LSRQSKMFYKQA+KTNSCCV+
Sbjct:   38 IKEMCTFFSKTIVKRTPAGQRQTVQHEDYNVHVYVRHDGLAATITADMEYPMRVAFVLLMNMMDQFSEQIQWQAETREEAIVFAPMQQAIVDYQDPAKADKITKIQRDLDDTTNVLHKTIESVLERGVKLDDLVDRSDSLSRQSKMFYKQAKKTNSCCVV 197
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BLAST of mRNA_D-dudresnayi_contig9566.28355.1 vs. uniprot
Match: A0A7S2V281_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V281_9STRA)

HSP 1 Score: 234 bits (597), Expect = 4.420e-76
Identity = 113/163 (69.33%), Postives = 142/163 (87.12%), Query Frame = 1 
Query:    1 IKEMCTFFSKTIVKRTQPGQRQSVQHE--DYNVHVYMRQDGLAGTVTADLEYPPRVAFVLLTQLLDQYAEQVP-WQSEIRHEAIRFPPMDKMILDFQDPAKADKITKIQRDLDETTEVLHRTIDNVLERGVRLDELVDRSDDLSRQSKMFYKQARKTNSCCVI 480
            +KE+ TFF++ +VKRT PG RQ+VQH   DYNVHVY+R DGLAG VT+D+EYPPRVAFV+LTQLLDQ+A  V  W++EIR EAI++PP+ + ++ +QDPA+ADK+TKIQRDLD+TTE+LH+TIDNVLERG +LD LV+RSDDLSRQSK+FY QARK NSCC+I
Sbjct:   38 VKELLTFFARMLVKRTSPGMRQTVQHNEFDYNVHVYVRADGLAGAVTSDMEYPPRVAFVMLTQLLDQFALDVRGWETEIRSEAIQWPPLGEALIRYQDPAEADKVTKIQRDLDQTTEILHKTIDNVLERGEKLDSLVERSDDLSRQSKLFYSQARKANSCCLI 200
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BLAST of mRNA_D-dudresnayi_contig9566.28355.1 vs. uniprot
Match: W7TQ86_9STRA (Vamp-like protein ykt62 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQ86_9STRA)

HSP 1 Score: 231 bits (589), Expect = 6.820e-75
Identity = 110/162 (67.90%), Postives = 139/162 (85.80%), Query Frame = 1 
Query:    1 IKEMCTFFSKTIVKRTQPGQRQSVQHEDYNVHVYMRQDGLAGTVTADLEYPPRVAFVLLTQLLDQYAEQVP-WQSEIRHEAIRFPPMDKMILDFQDPAKADKITKIQRDLDETTEVLHRTIDNVLERGVRLDELVDRSDDLSRQSKMFYKQARKTNSCCVIS 483
            I+EMC F SKT++KR QPGQRQ++QHE+YNVH ++R DGL GTV ADLEYPPRVAFVLL+ LL+++A  +  W S  + E++ +PP+ + I ++QDPAKADKITKI+RDLDETT++LH+TID VLERGV+LDELV+RS+DLS QSK+FYKQARKTNSCC IS
Sbjct:   38 IREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDITNWSSVTQQESVTYPPLQEAIREYQDPAKADKITKIRRDLDETTDILHKTIDAVLERGVKLDELVERSNDLSSQSKLFYKQARKTNSCCSIS 199
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BLAST of mRNA_D-dudresnayi_contig9566.28355.1 vs. uniprot
Match: A0A6T5VLC8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A6T5VLC8_9STRA)

HSP 1 Score: 228 bits (582), Expect = 8.180e-74
Identity = 112/162 (69.14%), Postives = 137/162 (84.57%), Query Frame = 1 
Query:    1 IKEMCTFFSKTIVKRTQPGQRQSVQHEDYNVHVYMRQDGLAGTVTADLEYPPRVAFVLLTQLLDQYAEQV--PWQSEIRHEAIRFPPMDKMILDFQDPAKADKITKIQRDLDETTEVLHRTIDNVLERGVRLDELVDRSDDLSRQSKMFYKQARKTNSCCVI 480
            + EM TFFSKT  KRTQPGQRQSV HE Y VH Y+R DGLAGTVT+DLEYP RVAFV+LTQ+LD + +Q    W+ E R E++ FP M++ +  FQ+PA+ADK++KIQ+DLDETTE+LH+TID+VLERGV+LD LV+RSDDLSRQSKMFYKQA+KTNSCC+I
Sbjct:   38 VSEMLTFFSKTFSKRTQPGQRQSVTHESYIVHCYVRGDGLAGTVTSDLEYPARVAFVMLTQMLDDFVQQFGDSWKRETRPESMTFPKMEEYLEKFQNPAEADKLSKIQKDLDETTEILHQTIDSVLERGVKLDALVERSDDLSRQSKMFYKQAKKTNSCCII 199
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BLAST of mRNA_D-dudresnayi_contig9566.28355.1 vs. uniprot
Match: A0A7R9W5E6_9STRA (Hypothetical protein n=4 Tax=Eupodiscales TaxID=33838 RepID=A0A7R9W5E6_9STRA)

HSP 1 Score: 228 bits (580), Expect = 4.110e-73
Identity = 110/163 (67.48%), Postives = 135/163 (82.82%), Query Frame = 1 
Query:    1 IKEMCTFFSKTIVKRTQPGQRQSVQHEDYNVHVYMRQDGLAGTVTADLEYPPRVAFVLLTQLLDQYAEQV--PWQSEIRHEAIRFPPMDKMILDFQDPAKADKITKIQRDLDETTEVLHRTIDNVLERGVRLDELVDRSDDLSRQSKMFYKQARKTNSCCVIS 483
            +KEM TFFSKT  KRTQPGQRQS+ HE Y VH Y+R DGLAG VT DLEYP RVAFVLLTQ+LD++   V   W++    E++ FPP++  +  +QDPA ADK+TKIQ+DLDETT++LH+TID+VLERG +LD+LV+RSDDLS+QSKMFYKQA+KTNSCCVIS
Sbjct:   66 VKEMLTFFSKTFTKRTQPGQRQSITHEQYVVHCYVRSDGLAGAVTTDLEYPARVAFVLLTQILDEFTGAVGDSWKTVTTPESVSFPPIENYLQKYQDPATADKVTKIQKDLDETTQILHKTIDSVLERGSKLDDLVERSDDLSKQSKMFYKQAKKTNSCCVIS 228
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BLAST of mRNA_D-dudresnayi_contig9566.28355.1 vs. uniprot
Match: A0A6U0IUG2_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0IUG2_9STRA)

HSP 1 Score: 226 bits (575), Expect = 1.550e-72
Identity = 110/163 (67.48%), Postives = 135/163 (82.82%), Query Frame = 1 
Query:    1 IKEMCTFFSKTIVKRTQPGQRQSVQHEDYNVHVYMRQDGLAGTVTADLEYPPRVAFVLLTQLLDQYAEQV--PWQSEIRHEAIRFPPMDKMILDFQDPAKADKITKIQRDLDETTEVLHRTIDNVLERGVRLDELVDRSDDLSRQSKMFYKQARKTNSCCVIS 483
            +KEM TFFSKT  KRT PGQRQS++HE Y VH Y+R DGLAGTVT DLEYP RVAFVLLTQLLD++ + V   W+S    E++ FP +++ +  +QDPA ADK+TKIQ+DLDETT++LH+TID+VLERGV+LD LV+RS+DLS QSKMFYKQA+KTNSCC IS
Sbjct:   53 VKEMLTFFSKTFTKRTDPGQRQSIEHESYVVHCYVRSDGLAGTVTTDLEYPARVAFVLLTQLLDEFQQTVGDSWRSVTTPESVTFPKIEEYLQKYQDPAAADKVTKIQQDLDETTQILHKTIDSVLERGVKLDSLVERSNDLSAQSKMFYKQAKKTNSCCTIS 215
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BLAST of mRNA_D-dudresnayi_contig9566.28355.1 vs. uniprot
Match: A0A6T5MNT8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5MNT8_HETAK)

HSP 1 Score: 225 bits (573), Expect = 2.040e-72
Identity = 109/164 (66.46%), Postives = 137/164 (83.54%), Query Frame = 1 
Query:    1 IKEMCTFFSKTIVKRTQPGQRQSVQHE--DYNVHVYMRQDGLAGTVTADLEYPPRVAFVLLTQLLDQYAEQVP--WQSEIRHEAIRFPPMDKMILDFQDPAKADKITKIQRDLDETTEVLHRTIDNVLERGVRLDELVDRSDDLSRQSKMFYKQARKTNSCCVI 480
            ++E+ TFFSK +VKRT+PG RQ+VQH   DYNVH Y+R DGL+GTVTAD+EYP RVAF+LLTQLLDQYA ++   W+ E R+E I FPP D+ ++ +QDPA ADK+TKIQRDLD+TTE+L+ TIDNVL RG +LD LV+RSD+LSRQSKMFY QA++ NSCC+I
Sbjct:   38 VRELLTFFSKLMVKRTEPGTRQTVQHNEFDYNVHTYVRADGLSGTVTADMEYPARVAFLLLTQLLDQYATELSGVWERETRNEVIAFPPADQALVQYQDPAAADKVTKIQRDLDQTTEILYNTIDNVLARGEKLDNLVERSDELSRQSKMFYSQAKRANSCCLI 201
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BLAST of mRNA_D-dudresnayi_contig9566.28355.1 vs. uniprot
Match: A0A7S2LY35_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LY35_9STRA)

HSP 1 Score: 223 bits (568), Expect = 3.890e-71
Identity = 110/164 (67.07%), Postives = 135/164 (82.32%), Query Frame = 1 
Query:    1 IKEMCTFFSKTIVKRTQPGQRQSVQHEDYNVHVYMRQDGLAGTVTADLEYPPRVAFVLLTQLLDQYAEQV--PWQS-EIRHEAIRFPPMDKMILDFQDPAKADKITKIQRDLDETTEVLHRTIDNVLERGVRLDELVDRSDDLSRQSKMFYKQARKTNSCCVIS 483
            +KEM TFFSKT  KRT+PGQRQS+ HE Y VH Y+R DGLAG+VT D EYPPRVAFVLLTQLLD++       W+S     E+  FPP+++ I+ +QDPA ADK+TKIQ DL+ETT++LH+TID+VLERGV+LD LV++SDDLSRQSKMFYKQA+KTNSCCV+S
Sbjct:   76 VKEMLTFFSKTFTKRTEPGQRQSISHESYVVHCYVRSDGLAGSVTTDAEYPPRVAFVLLTQLLDEFLSTNGDSWKSMPTLTESTVFPPLEEYIVKYQDPASADKVTKIQNDLEETTQILHKTIDSVLERGVKLDSLVEKSDDLSRQSKMFYKQAKKTNSCCVVS 239
[Close]
BLAST of mRNA_D-dudresnayi_contig9566.28355.1 vs. uniprot
Match: A0A7S2I938_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I938_9STRA)

HSP 1 Score: 222 bits (566), Expect = 1.470e-70
Identity = 109/163 (66.87%), Postives = 133/163 (81.60%), Query Frame = 1 
Query:    1 IKEMCTFFSKTIVKRTQPGQRQSVQHEDYNVHVYMRQDGLAGTVTADLEYPPRVAFVLLTQLLDQYAEQV--PWQSEIRHEAIRFPPMDKMILDFQDPAKADKITKIQRDLDETTEVLHRTIDNVLERGVRLDELVDRSDDLSRQSKMFYKQARKTNSCCVIS 483
            +KEM TFFSKT  KRT PGQRQS+ HE Y VH Y+R DGLAG VT+D EYP RVAFVLLTQLL+++ + V   W++    E++ FPP++  +  +QDPA ADK+TKIQ+DLDETT VLH+TID+VLERG +LD LV++SDDLSRQSKMFYKQA+KTNSCCVIS
Sbjct:   97 VKEMLTFFSKTFTKRTAPGQRQSITHESYVVHCYVRSDGLAGVVTSDAEYPSRVAFVLLTQLLEEFLQTVGDSWKTVTAPESVAFPPIETYLQKYQDPAAADKVTKIQQDLDETTSVLHKTIDSVLERGEKLDSLVEKSDDLSRQSKMFYKQAKKTNSCCVIS 259
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9566.28355.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G927_ECTSI5.910e-10896.89Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A836CN50_9STRA4.200e-8576.88Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A7S2V281_9STRA4.420e-7669.33Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TQ86_9STRA6.820e-7567.90Vamp-like protein ykt62 n=2 Tax=Monodopsidaceae Ta... [more]
A0A6T5VLC8_9STRA8.180e-7469.14Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]
A0A7R9W5E6_9STRA4.110e-7367.48Hypothetical protein n=4 Tax=Eupodiscales TaxID=33... [more]
A0A6U0IUG2_9STRA1.550e-7267.48Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A6T5MNT8_HETAK2.040e-7266.46Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2LY35_9STRA3.890e-7167.07Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2I938_9STRA1.470e-7066.87Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9566contigD-dudresnayi_contig9566:3153..5120 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score313.2
Seed ortholog evalue7.2e-83
Seed eggNOG ortholog2880.D7G927
Preferred nameYKT6
KEGG rclassRC00438,RC00439,RC00603,RC00604
KEGG koko:K01623,ko:K08516,ko:K18999
KEGG ReactionR01068,R01070,R01829,R02568
KEGG Pathwayko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04130,ko04138,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04130,map04138
KEGG ModuleM00001,M00003,M00165,M00167
GOsGO:0000139,GO:0000149,GO:0000322,GO:0000323,GO:0000324,GO:0003674,GO:0003824,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005768,GO:0005773,GO:0005783,GO:0005793,GO:0005794,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0006887,GO:0006888,GO:0006890,GO:0006891,GO:0006903,GO:0006904,GO:0006906,GO:0006996,GO:0007033,GO:0008104,GO:0008150,GO:0009987,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016409,GO:0016417,GO:0016482,GO:0016740,GO:0016746,GO:0016747,GO:0019706,GO:0019707,GO:0022406,GO:0030133,GO:0030425,GO:0030659,GO:0031090,GO:0031201,GO:0031224,GO:0031226,GO:0031410,GO:0031982,GO:0031984,GO:0032940,GO:0032991,GO:0033036,GO:0033116,GO:0034613,GO:0036477,GO:0042144,GO:0042147,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0048193,GO:0048278,GO:0048284,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0061024,GO:0061025,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0090174,GO:0097440,GO:0097441,GO:0097447,GO:0097458,GO:0097576,GO:0097708,GO:0098588,GO:0098791,GO:0098796,GO:0120025,GO:0120038,GO:0140029,GO:0140056,GO:0140096
EggNOG free text desc.SNAP receptor activity
EggNOG OGsCOG5143@1,KOG0861@2759
EC3.1.3.16,4.1.2.13
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01009,ko03021,ko03036,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSoluble NSF Attachment Protein (SNAP) Receptor (SNARE)
Ec32 orthologEc-15_002130.1
Exons4
Model size486
Cds size477
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9566.28355.1prot_D-dudresnayi_contig9566.28355.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9566 3162..5120 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930904.6831315-UTR-D-dudresnayi_contig9566:3152..31611622930904.6831315-UTR-D-dudresnayi_contig9566:3152..3161Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9566 3153..3161 +
1690557959.873821-UTR-D-dudresnayi_contig9566:3152..31611690557959.873821-UTR-D-dudresnayi_contig9566:3152..3161Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9566 3153..3161 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930904.7310154-CDS-D-dudresnayi_contig9566:3161..32341622930904.7310154-CDS-D-dudresnayi_contig9566:3161..3234Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9566 3162..3234 +
1690557959.8868058-CDS-D-dudresnayi_contig9566:3161..32341690557959.8868058-CDS-D-dudresnayi_contig9566:3161..3234Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9566 3162..3234 +
1622930904.7471833-CDS-D-dudresnayi_contig9566:3883..40831622930904.7471833-CDS-D-dudresnayi_contig9566:3883..4083Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9566 3884..4083 +
1690557959.8964462-CDS-D-dudresnayi_contig9566:3883..40831690557959.8964462-CDS-D-dudresnayi_contig9566:3883..4083Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9566 3884..4083 +
1622930904.7703369-CDS-D-dudresnayi_contig9566:4577..46431622930904.7703369-CDS-D-dudresnayi_contig9566:4577..4643Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9566 4578..4643 +
1690557959.9068134-CDS-D-dudresnayi_contig9566:4577..46431690557959.9068134-CDS-D-dudresnayi_contig9566:4577..4643Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9566 4578..4643 +
1622930904.7929296-CDS-D-dudresnayi_contig9566:4982..51201622930904.7929296-CDS-D-dudresnayi_contig9566:4982..5120Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9566 4983..5120 +
1690557959.917266-CDS-D-dudresnayi_contig9566:4982..51201690557959.917266-CDS-D-dudresnayi_contig9566:4982..5120Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9566 4983..5120 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9566.28355.1

>prot_D-dudresnayi_contig9566.28355.1 ID=prot_D-dudresnayi_contig9566.28355.1|Name=mRNA_D-dudresnayi_contig9566.28355.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=159bp
MCTFFSKTIVKRTQPGQRQSVQHEDYNVHVYMRQDGLAGTVTADLEYPPR
VAFVLLTQLLDQYAEQVPWQSEIRHEAIRFPPMDKMILDFQDPAKADKIT
KIQRDLDETTEVLHRTIDNVLERGVRLDELVDRSDDLSRQSKMFYKQARK
TNSCCVIS*
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mRNA from alignment at D-dudresnayi_contig9566:3153..5120+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9566.28355.1 ID=mRNA_D-dudresnayi_contig9566.28355.1|Name=mRNA_D-dudresnayi_contig9566.28355.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1968bp|location=Sequence derived from alignment at D-dudresnayi_contig9566:3153..5120+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATCAAGGAGATGTGTACATTCTTCAGCAAAACGATCGTCAAGCGCACGCA
ACCGGGGCAGAGGCAGAGCGTGCAACACGAGGGTGAGAAAACGACGCAAC
ACGATATCGCTCTTCGAGAAGTGTCGTGAAATCTATTTACGGTATGATAG
CGCATAGAGTTCCCAGCTCTTGTCCAGAGCGAACGACGTCTTGTCAATTA
TCACGTTCGTTTCACGAGCAACGCCGCCAGCAGCTCGTGTACTACTATCG
CAGATTCGCATACCGTGCGGTCAGTTGACGCACGACGCGCAGAAACGGCA
TCGTAGCATCACACGCCATACGACAGCACCCTCCTGTAGATTTTGCGTCA
TATTTTATTGCCAGATTCCATCATACCTCTATAAGTAATTGACGAAAGCA
AGAACGTAGCAGCGTCCTGTATCCCACGTTGCCTCAAAGACCCTCCTGTT
TATTGGCTGTTGGGTGTCTGCAAAAACCACGTGCGGCAGGCGAGGGTAAA
ACATGCCTCCATCTCTTGTACGGCACACTTTGCTGGAGCGCAATATCACA
CCTGACGAGAGCAGCATGTTCGCGGTTTGCTATATATATATCGAGAACAC
AGGCAGTCGTGACGAAAGGAGCAACCGATCACTTCTCGTTGCTAAGACGC
GATGGAGATGCCCTATCATAATATCTTGGGTTCACGTGTTTCTGCTCTCT
CGCGTCTGCTCCGTTCGTCCGGACTATACAGACTACAACGTTCACGTGTA
CATGCGGCAAGATGGCTTGGCGGGAACCGTAACGGCGGATCTGGAGTACC
CACCACGAGTAGCGTTCGTTTTGCTCACGCAGCTGTTGGATCAGTACGCG
GAACAGGTGCCGTGGCAGTCCGAGATCCGACACGAGGCGATTCGGTTCCC
TCCCATGGATAAAATGATCCTGGACTTCCAGGTGAGCAACGTGTGCTGCC
ACCCCGGGGACCAGTAAACCAATCCACGCATCGAGATAGCCCACGTTCGA
GTCTCCTTTGTGTATTGCTACGAGTACGCGTCACGGAGCATGGGAGGTTC
GTGTATATGTGCGCTTCTTTCGCCTTCAGAATCCGGGTGGGATTTCGGAA
GCTAAAACAGTGGTACGCTGCTGTGCAGGAACAATGGACGCGAGGCTGGG
GAAACGATGCAACGGTTTCAGCTCACGGAGGAGGAGGCGCTTTGATGCAG
CGTGCGCTTGTGCCCCCCCCCCGCTCTCTCCTGTACTGTTGCATTTTCCT
CTATCCCACGACCGTCGCAGCGTTCGCAACATGGTTGGTGTGCGCGGAGC
GCAGAGTTGCCGTCCATGCGAACCAAAAAATGTACCGACAGCTTTGCGTA
GTTGACACCTAGATATAAGGTCCTGACGTGTAATTAATACAACGCTCCGT
TTTTTGTTGTCGCTGGTGAACGCAGGATCCGGCGAAGGCCGACAAGATCA
CCAAGATTCAGCGCGATTTGGACGAGACGACGGAAGTGCTGGTGCGACCT
CATATAGACAAAGGCAGTAGACCTGTGAATGACGCCTGGGTGTACACACG
GCTGTGGTATAGACAATTCTGATATGATATAGTAGTGGTTACAGAAAAAT
CCTGGCGCCAGCAGGACAAGGGTCCACTCGCAAACATCTGCGCGATGCTG
CTGAATATCACGCGTTGCCTGCAGTTATGTGCAGCACTCGTAAGGTGTCA
CGGTAGTGGGGTGTTTCTCGCGCGATTACCCTGCATGTTAGGTGTAACTT
CTCGCAAAATGTGTTAGCGGCAGCTTTGTGTCGACTTCACCCTCCGTTTG
TGTTTTTGCTTTTTTCGATAAACGTGTCAGCACCGAACGATCGACAACGT
GTTGGAGCGAGGAGTGCGACTGGACGAGCTCGTGGACCGATCGGACGACT
TGAGCCGACAGTCTAAAATGTTCTACAAGCAGGCGAGGAAAACCAACAGC
TGCTGCGTCATCAGCTAG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9566:3153..5120+

>mRNA_D-dudresnayi_contig9566.28355.1 ID=mRNA_D-dudresnayi_contig9566.28355.1|Name=mRNA_D-dudresnayi_contig9566.28355.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=954bp|location=Sequence derived from alignment at D-dudresnayi_contig9566:3153..5120+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGTGTACATTCTTCAGCAAAACGATCGTCAAGCGCACGCAACCGGGGCA
GAGGCAGAGCGTGCAACACGAGGATGTGTACATTCTTCAGCAAAACGATC
GTCAAGCGCACGCAACCGGGGCAGAGGCAGAGCGTGCAACACGAGGACTA
CAACGTTCACGTGTACATGCGGCAAGATGGCTTGGCGGGAACCGTAACGG
CGGATCTGGAGTACCCACCACGAGTAGCGTTCGTTTTGCTCACGCAGCTG
TTGGATCAGTACGCGGAACAGGTGCCGTGGCAGTCCGAGATCCGACACGA
GGCGATTCGGTTCCCTCCCATGGATAAAATGATCCTGGACTTCCAGACTA
CAACGTTCACGTGTACATGCGGCAAGATGGCTTGGCGGGAACCGTAACGG
CGGATCTGGAGTACCCACCACGAGTAGCGTTCGTTTTGCTCACGCAGCTG
TTGGATCAGTACGCGGAACAGGTGCCGTGGCAGTCCGAGATCCGACACGA
GGCGATTCGGTTCCCTCCCATGGATAAAATGATCCTGGACTTCCAGGATC
CGGCGAAGGCCGACAAGATCACCAAGATTCAGCGCGATTTGGACGAGACG
ACGGAAGTGCTGGATCCGGCGAAGGCCGACAAGATCACCAAGATTCAGCG
CGATTTGGACGAGACGACGGAAGTGCTGCACCGAACGATCGACAACGTGT
TGGAGCGAGGAGTGCGACTGGACGAGCTCGTGGACCGATCGGACGACTTG
AGCCGACAGTCTAAAATGTTCTACAAGCAGGCGAGGAAAACCAACAGCTG
CTGCGTCATCAGCTAGCACCGAACGATCGACAACGTGTTGGAGCGAGGAG
TGCGACTGGACGAGCTCGTGGACCGATCGGACGACTTGAGCCGACAGTCT
AAAATGTTCTACAAGCAGGCGAGGAAAACCAACAGCTGCTGCGTCATCAG
CTAG
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