mRNA_D-dudresnayi_contig9483.28290.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9483.28290.1
Unique NamemRNA_D-dudresnayi_contig9483.28290.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9483.28290.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9483contigD-dudresnayi_contig9483:9298..9782 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size485
Cds size483
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930895.210524-CDS-D-dudresnayi_contig9483:9297..97801622930895.210524-CDS-D-dudresnayi_contig9483:9297..9780Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9483 9298..9780 +
1690557956.0303829-CDS-D-dudresnayi_contig9483:9297..97801690557956.0303829-CDS-D-dudresnayi_contig9483:9297..9780Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9483 9298..9780 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9483.28290.1prot_D-dudresnayi_contig9483.28290.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9483 9298..9780 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9483.28290.1

>prot_D-dudresnayi_contig9483.28290.1 ID=prot_D-dudresnayi_contig9483.28290.1|Name=mRNA_D-dudresnayi_contig9483.28290.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=161bp
AKEESASDKQPTVATSAAIEEEEGAGSAGGHEERDSGEGGSNGQEGGGES
ENAGLGVEEGGQGNDSASGTARTSPPATSQGNGTFIEGNSTTIDGNSTTK
TGIIQEGEGEDVVVAEHGQEEGGGGGWTWDGDTKSEGGAEQPPAVMTRAP
VDEEGGGSADE
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mRNA from alignment at D-dudresnayi_contig9483:9298..9782+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9483.28290.1 ID=mRNA_D-dudresnayi_contig9483.28290.1|Name=mRNA_D-dudresnayi_contig9483.28290.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=485bp|location=Sequence derived from alignment at D-dudresnayi_contig9483:9298..9782+ (Desmarestia dudresnayi DdudBR16 monoicous)
GCGAAAGAAGAATCCGCGAGCGATAAGCAACCGACGGTGGCGACGTCGGC
CGCTATCGAGGAGGAAGAAGGGGCCGGGTCAGCAGGTGGGCACGAGGAGA
GGGACTCTGGCGAAGGCGGAAGCAACGGACAAGAAGGGGGAGGAGAGAGC
GAAAACGCGGGACTTGGCGTAGAGGAGGGCGGCCAGGGGAACGACTCCGC
CTCTGGTACGGCCAGAACTTCACCCCCGGCCACCTCACAAGGCAATGGAA
CGTTTATTGAGGGCAACAGCACCACCATCGACGGTAACAGCACGACCAAA
ACAGGAATTATTCAGGAAGGAGAAGGAGAAGATGTTGTGGTGGCAGAACA
TGGACAAGAGGAGGGTGGCGGTGGTGGGTGGACCTGGGACGGTGACACGA
AATCGGAGGGGGGTGCTGAGCAGCCGCCAGCCGTGATGACTCGGGCGCCC
GTTGATGAAGAGGGGGGCGGATCGGCAGACGAGGG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9483:9298..9782+

>mRNA_D-dudresnayi_contig9483.28290.1 ID=mRNA_D-dudresnayi_contig9483.28290.1|Name=mRNA_D-dudresnayi_contig9483.28290.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=966bp|location=Sequence derived from alignment at D-dudresnayi_contig9483:9298..9782+ (Desmarestia dudresnayi DdudBR16 monoicous)
GCGAAAGAAGAATCCGCGAGCGATAAGCAACCGACGGTGGCGACGTCGGC
CGCTATCGAGGAGGAAGAAGGGGCCGGGTCAGCAGGTGGGCACGAGGAGA
GGGACTCTGGCGAAGGCGGAAGCAACGGACAAGAAGGGGGAGGAGAGAGC
GAAAACGCGGGACTTGGCGTAGAGGAGGGCGGCCAGGGGAACGACTCCGC
CTCTGGTACGGCCAGAACTTCACCCCCGGCCACCTCACAAGGCAATGGAA
CGTTTATTGAGGGCAACAGCACCACCATCGACGGTAACAGCACGACCAAA
ACAGGAATTATTCAGGAAGGAGAAGGAGAAGATGTTGTGGTGGCAGAACA
TGGACAAGAGGAGGGTGGCGGTGGTGGGTGGACCTGGGACGGTGACACGA
AATCGGAGGGGGGTGCTGAGCAGCCGCCAGCCGTGATGACTCGGGCGCCC
GTTGATGAAGAGGGGGGCGGATCGGCAGACGAGGCGAAAGAAGAATCCGC
GAGCGATAAGCAACCGACGGTGGCGACGTCGGCCGCTATCGAGGAGGAAG
AAGGGGCCGGGTCAGCAGGTGGGCACGAGGAGAGGGACTCTGGCGAAGGC
GGAAGCAACGGACAAGAAGGGGGAGGAGAGAGCGAAAACGCGGGACTTGG
CGTAGAGGAGGGCGGCCAGGGGAACGACTCCGCCTCTGGTACGGCCAGAA
CTTCACCCCCGGCCACCTCACAAGGCAATGGAACGTTTATTGAGGGCAAC
AGCACCACCATCGACGGTAACAGCACGACCAAAACAGGAATTATTCAGGA
AGGAGAAGGAGAAGATGTTGTGGTGGCAGAACATGGACAAGAGGAGGGTG
GCGGTGGTGGGTGGACCTGGGACGGTGACACGAAATCGGAGGGGGGTGCT
GAGCAGCCGCCAGCCGTGATGACTCGGGCGCCCGTTGATGAAGAGGGGGG
CGGATCGGCAGACGAG
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