mRNA_D-dudresnayi_contig9483.28289.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9483.28289.1
Unique NamemRNA_D-dudresnayi_contig9483.28289.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9483.28289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9483contigD-dudresnayi_contig9483:7957..8979 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size1024
Cds size1023
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930895.1499104-CDS-D-dudresnayi_contig9483:7956..89791622930895.1499104-CDS-D-dudresnayi_contig9483:7956..8979Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9483 7957..8979 +
1690557956.0201533-CDS-D-dudresnayi_contig9483:7956..89791690557956.0201533-CDS-D-dudresnayi_contig9483:7956..8979Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9483 7957..8979 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9483.28289.1prot_D-dudresnayi_contig9483.28289.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9483 7957..8979 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9483.28289.1

>prot_D-dudresnayi_contig9483.28289.1 ID=prot_D-dudresnayi_contig9483.28289.1|Name=mRNA_D-dudresnayi_contig9483.28289.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=341bp
GDGSGSSSSSAADQDNSNGGGDGGADVVDTTSAGESGLPMENVLDEVTGV
EKEEEEVVGEDEGKDQGGEGGSDAVVAAVGTDPPVEPNQDDATLSEGNPA
PAEQGGEAVNTGQAGEEEGAPKGDGDAGGLDEAVEIAEATSPPVAEGLAE
QGNGGAEDRGDKGSNVTPAGGDSTGDVDNIDEGAGGEEAGEGGAGGGWEW
GGNAESAKEESAGGEQPAVAAASAPVDEEGKGGDADVEVSEGQEGAVFGA
EPGDEGNDAIPVSLSTEPPASLQGNATLVEGTGDVEILEEGEGGVDVQEA
GEGDKGGGWESGGKAESAKEASTGDEQQTVVATSSHVSEEG
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mRNA from alignment at D-dudresnayi_contig9483:7957..8979+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9483.28289.1 ID=mRNA_D-dudresnayi_contig9483.28289.1|Name=mRNA_D-dudresnayi_contig9483.28289.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1023bp|location=Sequence derived from alignment at D-dudresnayi_contig9483:7957..8979+ (Desmarestia dudresnayi DdudBR16 monoicous)
GGGGACGGCAGTGGTAGTAGTAGTAGTAGCGCCGCCGATCAGGACAACTC
GAACGGGGGCGGTGATGGGGGTGCCGATGTAGTCGATACGACATCCGCGG
GCGAGTCAGGACTGCCGATGGAGAATGTTTTGGATGAAGTTACGGGGGTT
GAGAAGGAGGAGGAGGAGGTGGTTGGAGAGGACGAAGGGAAGGATCAGGG
TGGAGAAGGCGGTAGCGACGCTGTCGTTGCTGCTGTTGGGACCGACCCTC
CGGTAGAACCCAATCAGGACGACGCCACGCTGTCTGAAGGCAACCCAGCT
CCAGCCGAGCAAGGTGGCGAGGCCGTAAACACAGGGCAGGCGGGAGAAGA
GGAAGGCGCCCCTAAGGGAGACGGGGATGCTGGAGGATTGGATGAAGCAG
TGGAGATCGCGGAGGCGACGTCGCCGCCCGTGGCAGAGGGATTGGCAGAA
CAGGGAAACGGAGGCGCGGAGGACAGAGGGGATAAAGGCTCCAACGTCAC
GCCCGCTGGCGGTGATAGTACCGGTGACGTCGACAACATTGACGAGGGGG
CAGGTGGCGAGGAAGCAGGAGAAGGCGGCGCTGGCGGTGGATGGGAGTGG
GGCGGAAATGCGGAATCCGCAAAGGAAGAATCCGCCGGGGGTGAGCAGCC
GGCCGTGGCAGCGGCATCGGCGCCTGTCGACGAGGAAGGGAAGGGGGGAG
ATGCAGACGTTGAGGTGTCAGAGGGGCAGGAAGGAGCCGTATTTGGCGCA
GAACCGGGCGACGAAGGAAATGATGCCATCCCTGTTTCGTTGTCAACAGA
ACCCCCGGCAAGCCTACAGGGCAATGCCACGCTTGTTGAGGGTACAGGTG
ATGTCGAAATACTTGAGGAGGGTGAAGGTGGAGTGGATGTACAAGAGGCA
GGAGAGGGCGACAAGGGCGGTGGATGGGAGTCGGGCGGAAAGGCGGAATC
CGCCAAGGAAGCGTCGACCGGCGACGAGCAACAGACCGTGGTGGCGACAT
CGTCCCATGTCAGCGAGGAAGGC
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9483:7957..8979+

>mRNA_D-dudresnayi_contig9483.28289.1 ID=mRNA_D-dudresnayi_contig9483.28289.1|Name=mRNA_D-dudresnayi_contig9483.28289.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2046bp|location=Sequence derived from alignment at D-dudresnayi_contig9483:7957..8979+ (Desmarestia dudresnayi DdudBR16 monoicous)
GGGGACGGCAGTGGTAGTAGTAGTAGTAGCGCCGCCGATCAGGACAACTC
GAACGGGGGCGGTGATGGGGGTGCCGATGTAGTCGATACGACATCCGCGG
GCGAGTCAGGACTGCCGATGGAGAATGTTTTGGATGAAGTTACGGGGGTT
GAGAAGGAGGAGGAGGAGGTGGTTGGAGAGGACGAAGGGAAGGATCAGGG
TGGAGAAGGCGGTAGCGACGCTGTCGTTGCTGCTGTTGGGACCGACCCTC
CGGTAGAACCCAATCAGGACGACGCCACGCTGTCTGAAGGCAACCCAGCT
CCAGCCGAGCAAGGTGGCGAGGCCGTAAACACAGGGCAGGCGGGAGAAGA
GGAAGGCGCCCCTAAGGGAGACGGGGATGCTGGAGGATTGGATGAAGCAG
TGGAGATCGCGGAGGCGACGTCGCCGCCCGTGGCAGAGGGATTGGCAGAA
CAGGGAAACGGAGGCGCGGAGGACAGAGGGGATAAAGGCTCCAACGTCAC
GCCCGCTGGCGGTGATAGTACCGGTGACGTCGACAACATTGACGAGGGGG
CAGGTGGCGAGGAAGCAGGAGAAGGCGGCGCTGGCGGTGGATGGGAGTGG
GGCGGAAATGCGGAATCCGCAAAGGAAGAATCCGCCGGGGGTGAGCAGCC
GGCCGTGGCAGCGGCATCGGCGCCTGTCGACGAGGAAGGGAAGGGGGGAG
ATGCAGACGTTGAGGTGTCAGAGGGGCAGGAAGGAGCCGTATTTGGCGCA
GAACCGGGCGACGAAGGAAATGATGCCATCCCTGTTTCGTTGTCAACAGA
ACCCCCGGCAAGCCTACAGGGCAATGCCACGCTTGTTGAGGGTACAGGTG
ATGTCGAAATACTTGAGGAGGGTGAAGGTGGAGTGGATGTACAAGAGGCA
GGAGAGGGCGACAAGGGCGGTGGATGGGAGTCGGGCGGAAAGGCGGAATC
CGCCAAGGAAGCGTCGACCGGCGACGAGCAACAGACCGTGGTGGCGACAT
CGTCCCATGTCAGCGAGGAAGGCGGGGACGGCAGTGGTAGTAGTAGTAGT
AGCGCCGCCGATCAGGACAACTCGAACGGGGGCGGTGATGGGGGTGCCGA
TGTAGTCGATACGACATCCGCGGGCGAGTCAGGACTGCCGATGGAGAATG
TTTTGGATGAAGTTACGGGGGTTGAGAAGGAGGAGGAGGAGGTGGTTGGA
GAGGACGAAGGGAAGGATCAGGGTGGAGAAGGCGGTAGCGACGCTGTCGT
TGCTGCTGTTGGGACCGACCCTCCGGTAGAACCCAATCAGGACGACGCCA
CGCTGTCTGAAGGCAACCCAGCTCCAGCCGAGCAAGGTGGCGAGGCCGTA
AACACAGGGCAGGCGGGAGAAGAGGAAGGCGCCCCTAAGGGAGACGGGGA
TGCTGGAGGATTGGATGAAGCAGTGGAGATCGCGGAGGCGACGTCGCCGC
CCGTGGCAGAGGGATTGGCAGAACAGGGAAACGGAGGCGCGGAGGACAGA
GGGGATAAAGGCTCCAACGTCACGCCCGCTGGCGGTGATAGTACCGGTGA
CGTCGACAACATTGACGAGGGGGCAGGTGGCGAGGAAGCAGGAGAAGGCG
GCGCTGGCGGTGGATGGGAGTGGGGCGGAAATGCGGAATCCGCAAAGGAA
GAATCCGCCGGGGGTGAGCAGCCGGCCGTGGCAGCGGCATCGGCGCCTGT
CGACGAGGAAGGGAAGGGGGGAGATGCAGACGTTGAGGTGTCAGAGGGGC
AGGAAGGAGCCGTATTTGGCGCAGAACCGGGCGACGAAGGAAATGATGCC
ATCCCTGTTTCGTTGTCAACAGAACCCCCGGCAAGCCTACAGGGCAATGC
CACGCTTGTTGAGGGTACAGGTGATGTCGAAATACTTGAGGAGGGTGAAG
GTGGAGTGGATGTACAAGAGGCAGGAGAGGGCGACAAGGGCGGTGGATGG
GAGTCGGGCGGAAAGGCGGAATCCGCCAAGGAAGCGTCGACCGGCGACGA
GCAACAGACCGTGGTGGCGACATCGTCCCATGTCAGCGAGGAAGGC
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