mRNA_D-dudresnayi_contig9479.28283.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9479.28283.1
Unique NamemRNA_D-dudresnayi_contig9479.28283.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig9479.28283.1 vs. uniprot
Match: A0A836CPS5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPS5_9STRA)

HSP 1 Score: 225 bits (573), Expect = 2.980e-69
Identity = 119/203 (58.62%), Postives = 143/203 (70.44%), Query Frame = 1
Query:    4 QFLFVTATLPEVVVKQIEAEFPEVMTLRGPGLHRVAPSVNETLVDCSGPGVQARGIAQVYTNKRKALVTAL-ESSEAQRTVVFCNTIDQCRRVENALQRQDRQGRARQVLCYHSAIEAAAREANLVEFCRAKLKQPAVLVCTDRASRGMDFQSSPVDHVVLFDFPQEPSEYLRRVGRXXXXXXXGKVTVLAYGKQLPAARAVM 609
            QFLFVTATLP  V + ++AEFP    + GPGLHRVAP V E LVDCSGP  +A+  A     KR+AL+T L   S A RT+VFCNTI  CR VEN L+R DR+     VL YHSAI+ AA  ANL EF R+   QP +LVCTDR+SRGMDF S+ VDHVVL+DFP++P EY+RRVGR       G VTVLA+G+Q+P AR +M
Sbjct:  174 QFLFVTATLPTEVAEMVKAEFPGTKFITGPGLHRVAPGVEEVLVDCSGPPEEAKNEATGAARKREALMTQLTRRSGALRTLVFCNTIRSCREVENTLRRTDRRSARFSVLAYHSAIDPAAATANLREFSRSNALQPMILVCTDRSSRGMDFDSASVDHVVLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQVPLAREIM 376          
BLAST of mRNA_D-dudresnayi_contig9479.28283.1 vs. uniprot
Match: A0A1E7FAF1_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAF1_9STRA)

HSP 1 Score: 212 bits (539), Expect = 1.660e-65
Identity = 110/208 (52.88%), Postives = 142/208 (68.27%), Query Frame = 1
Query:    1 TQFLFVTATLPEVVVKQIEAEFPEVMTLRGPGLHRVAPSVNETLVDCSGPGVQARGIAQVYTNKRKALVTALESSEAQRTVVFCNTIDQCRRVENALQRQDRQGRARQVLCYHSAIEAAAREANLVEFCRAKLKQPA-----VLVCTDRASRGMDFQSSPVDHVVLFDFPQEPSEYLRRVGRXXXXXXXGKVTVLAYGKQLPAARAVM 609
            TQF+FVTATLP+ VV+ IE EFP V+ ++GPGLHR+APS+ E LVD S P  Q R     +  K K L+ AL  +  +RT++FCNT++ CR VEN L R+DR  R  +VL YHSA++  +R ANL  F   K          VL+CTDRA+RG+DF ++PVDHVV+FDFP++P+EY+RRVGR       G  TV AYG QLP AR+VM
Sbjct:   23 TQFIFVTATLPDSVVETIETEFPGVVKIKGPGLHRLAPSLQEHLVDVSVPADQNRNEELCFDVKAKQLLKALRQNRCRRTLIFCNTVESCRTVENLLNRKDRHNRVFEVLSYHSAMKPESRNANLSLFANGKKNNSYEEVDYVLICTDRAARGVDFDAAPVDHVVVFDFPKDPAEYIRRVGRSARAGRKGTSTVFAYGWQLPIARSVM 230          
BLAST of mRNA_D-dudresnayi_contig9479.28283.1 vs. uniprot
Match: A0A7S2V2H4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2H4_9STRA)

HSP 1 Score: 216 bits (549), Expect = 5.560e-64
Identity = 104/203 (51.23%), Postives = 149/203 (73.40%), Query Frame = 1
Query:    1 TQFLFVTATLPEVVVKQIEAEFPEVMTLRGPGLHRVAPSVNETLVDCSGPGVQARGIAQVYTNKRKALVTALESSEAQRTVVFCNTIDQCRRVENALQRQDRQGRARQVLCYHSAIEAAAREANLVEFCRAKLKQPAVLVCTDRASRGMDFQSSPVDHVVLFDFPQEPSEYLRRVGRXXXXXXXGKVTVLAYGKQLPAARAVM 609
            TQF+FVTATLPE+VV+Q++ EFP++ T+ GPGLHRV+P++++ +VDCSGP  +       + +KR+AL   L +  AQRT+VFCNTI+ CR+VENA+QR +++G+   VL +H+AI+   R  +L  F R     P +L+CTDRASRGMDF ++ V+HV+LFDFP++PSEY+RRVGR       G+VT L +G+QL  AR ++
Sbjct:  334 TQFVFVTATLPELVVEQVKEEFPDIKTILGPGLHRVSPNLDQVIVDCSGPWGEKHTEDSGFRHKREALTELLATVPAQRTLVFCNTIENCRKVENAVQRWNKKGQKALVLAHHNAIDPERRGKHLRSFMRPNSLLPMILICTDRASRGMDFDTADVEHVILFDFPRDPSEYMRRVGRTARAGRTGRVTSLVFGRQLGMARDII 536          
BLAST of mRNA_D-dudresnayi_contig9479.28283.1 vs. uniprot
Match: A0A1Z5KQ17_FISSO (ATP-dependent RNA helicase DDX18/HAS1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQ17_FISSO)

HSP 1 Score: 212 bits (539), Expect = 9.480e-63
Identity = 104/202 (51.49%), Postives = 138/202 (68.32%), Query Frame = 1
Query:    4 QFLFVTATLPEVVVKQIEAEFPEVMTLRGPGLHRVAPSVNETLVDCSGPGVQARGIAQVYTNKRKALVTALESSEAQRTVVFCNTIDQCRRVENALQRQDRQGRARQVLCYHSAIEAAAREANLVEFCRAKLKQPAVLVCTDRASRGMDFQSSPVDHVVLFDFPQEPSEYLRRVGRXXXXXXXGKVTVLAYGKQLPAARAVM 609
            QF+FV ATLP  V+K ++ EFP+V  ++GPGLHRVA +V E LVD S P    R     +  K K L+TAL  +  +RT++FCNT++ CR+VEN L+R+DR  R  ++  YH A+    R  NL EF R +    +VL+CTDRA+RG+DF +SPVDHVV+FDFP++P+EY+RRVGR       G  TVLAYG QLP AR +M
Sbjct:  260 QFVFVAATLPNSVIKTVQREFPDVQVVKGPGLHRVAMTVEERLVDVSVPPQYNRDAKYCFEVKAKELMTALRKNRCRRTLIFCNTVESCRQVENLLKRKDRSERVNKIYTYHGAMTPEVRRENLAEFVRQEQDIDSVLICTDRAARGVDFAASPVDHVVIFDFPKDPAEYIRRVGRTARAGRKGTTTVLAYGWQLPIARGIM 461          
BLAST of mRNA_D-dudresnayi_contig9479.28283.1 vs. uniprot
Match: A0A7S1GM49_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GM49_CYCTE)

HSP 1 Score: 202 bits (514), Expect = 8.580e-62
Identity = 106/205 (51.71%), Postives = 137/205 (66.83%), Query Frame = 1
Query:    1 TQFLFVTATLPEVVVKQIEAEFPEVMTLRGPGLHRVAPSVNETLVDCSGPGVQARGIAQVYTNKRKALVTALESSEAQRTVVFCNTIDQCRRVENALQRQDRQGRARQVLCYHSAIEAAAREANLVEFCRAKLKQPA--VLVCTDRASRGMDFQSSPVDHVVLFDFPQEPSEYLRRVGRXXXXXXXGKVTVLAYGKQLPAARAVM 609
            TQF+FVTATLP+ VV+ +E EFP V  ++GPGLHRVA +V E LVD S P    R     +  K K L+ AL S+  +RT++FCNT++ CR VEN L R+DR+G+   V  YH+A+   +R  NL  F   +       VLVCTDRA+RG+DF ++PVDHVVLFDFP++P+EY+RRVGR       G  TV AYG QLP AR +M
Sbjct:   12 TQFVFVTATLPDDVVETVEKEFPGVAKVKGPGLHRVALTVKEHLVDVSVPSYANRDTKLCFEIKAKQLMKALRSNRCRRTLIFCNTVESCRTVENLLNRKDRRGQVYSVSSYHNAMTPESRNRNLAVFAHGQKGDAVDYVLVCTDRAARGVDFDAAPVDHVVLFDFPKDPAEYVRRVGRTARAGRAGTSTVFAYGWQLPIARKIM 216          
BLAST of mRNA_D-dudresnayi_contig9479.28283.1 vs. uniprot
Match: A0A448ZKM4_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKM4_9STRA)

HSP 1 Score: 208 bits (529), Expect = 3.380e-60
Identity = 109/208 (52.40%), Postives = 140/208 (67.31%), Query Frame = 1
Query:    1 TQFLFVTATLPEVVVKQIEAEFPEVMTLRGPGLHRVAPSVNETLVDCSGPGVQARGIAQVYTNKRKALVTALESSEAQRTVVFCNTIDQCRRVENALQRQDRQGRARQVLCYHSAIEAAAREANLVEFCRAKLKQ-----PAVLVCTDRASRGMDFQSSPVDHVVLFDFPQEPSEYLRRVGRXXXXXXXGKVTVLAYGKQLPAARAVM 609
            TQF+FVTATLP+ +V+ I  EFP V+ ++GPGLHR APS+ E LVD S P    R     +  K KAL+ AL  +  +RT+VFCNT++ CR VEN L R+DR+GR  +VL YHSA+   AR ANL  F R +          VL+CTDRA+RG+DF  +PV+H V+FDFP++P+EY+RRVGR       G  TV AYG QLP AR+VM
Sbjct:  403 TQFVFVTATLPDSIVETITTEFPGVVKVKGPGLHRPAPSLKENLVDVSVPSSSNRNEDLCFDLKAKALLKALRQNRCRRTLVFCNTVESCRSVENLLNRKDRRGRVFEVLAYHSAMTPEARNANLRVFARGRNNDRNEEVDYVLICTDRAARGVDFDEAPVNHCVVFDFPKDPAEYIRRVGRTARAGRVGTSTVFAYGWQLPIARSVM 610          
BLAST of mRNA_D-dudresnayi_contig9479.28283.1 vs. uniprot
Match: I2CPE5_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPE5_NANGC)

HSP 1 Score: 200 bits (508), Expect = 4.340e-60
Identity = 113/203 (55.67%), Postives = 142/203 (69.95%), Query Frame = 1
Query:    1 TQFLFVTATLPEVVVKQIEAEFPEVMTLRGPGLHRVAPSVNETLVDCSGPGVQARGIAQVYTNKRKALVTALESSEAQRTVVFCNTIDQCRRVENALQRQDRQGRARQVLCYHSAIEAAAREANLVEFCRAKLKQPAVLVCTDRASRGMDFQSSPVDHVVLFDFPQEPSEYLRRVGRXXXXXXXGKVTVLAYGKQLPAARAVM 609
            TQFLFVTATLP  V  QI  EFP V  L GPGLH++AP V E LVDCSGP  + R     +  KR  LV  L    A R++VFCN+I  CR+VENAL+R DRQ +  QVL YHSA+    R+ NL  F  +++++P ++VCTDR SRG+DF ++ V HVVLFDFP++PSEY+RRVG XXXXXXX  VT L  G+Q+  AR++M
Sbjct:  124 TQFLFVTATLPVPVADQIAREFPGVKKLWGPGLHKIAPQVEEVLVDCSGPWEEERNEETGFVRKRDMLVQNLLKHPAPRSLVFCNSIPTCRKVENALRRADRQEKRWQVLAYHSAVNPQDRQKNLDIF-SSRVERPLIMVCTDRTSRGVDFDTADVQHVVLFDFPRDPSEYVRRVGXXXXXXXXXXVTALVLGRQVGLARSIM 325          
BLAST of mRNA_D-dudresnayi_contig9479.28283.1 vs. uniprot
Match: B7G340_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G340_PHATC)

HSP 1 Score: 204 bits (520), Expect = 2.770e-59
Identity = 109/208 (52.40%), Postives = 139/208 (66.83%), Query Frame = 1
Query:    1 TQFLFVTATLPEVVVKQIEAEFPEVMTLRGPGLHRVAPSVNETLVDCSGPGVQARGIAQVYTNKRKALVTALESSEAQRTVVFCNTIDQCRRVENALQRQDRQGRARQVLCYHSAIEAAAREANLVEFCRA-KLKQPA----VLVCTDRASRGMDFQSSPVDHVVLFDFPQEPSEYLRRVGRXXXXXXXGKVTVLAYGKQLPAARAVM 609
            TQF+FVTATLP+ VV+ +E EF  V  ++GPGLHRVAP+V E LVD S P    R     +  K K L+ AL  +  +RT+VFCNT++ CR VEN L+R+DR+G   +V  YH+A+    R  NL  F    +  QP     VLVCTDRA+RG+DF+ +PVDHVVLFDFP++P+EY+RRVGR       G  TV AYG QLP AR+VM
Sbjct:  339 TQFVFVTATLPDTVVETVEKEFRGVQLIKGPGLHRVAPTVQERLVDVSVPSQNNRDAKLCFDVKAKQLLKALRQTRCRRTLVFCNTVESCRSVENLLKRKDRKGNVFEVRAYHNAMTPENRNENLAVFSHGIRTTQPEKVDYVLVCTDRAARGVDFERAPVDHVVLFDFPKDPAEYVRRVGRTARAGRTGTSTVFAYGWQLPIARSVM 546          
BLAST of mRNA_D-dudresnayi_contig9479.28283.1 vs. uniprot
Match: A0A7S2Y9X7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y9X7_9STRA)

HSP 1 Score: 204 bits (518), Expect = 3.670e-59
Identity = 105/207 (50.72%), Postives = 141/207 (68.12%), Query Frame = 1
Query:    1 TQFLFVTATLPEVVVKQIEAEFPEVMTLRGPGLHRVAPSVNETLVDCSGPGVQARGIAQVYTNKRKALVTALESSEAQRTVVFCNTIDQCRRVENALQRQDRQGRARQVLCYHSAIEAAAREANLVEFCRAKLKQPA----VLVCTDRASRGMDFQSSPVDHVVLFDFPQEPSEYLRRVGRXXXXXXXGKVTVLAYGKQLPAARAVM 609
            TQF+FVTATLP  + + +E EFP V+ +RGPGLHRVAP+V E LVD S P    R  +  +  K + L+ AL  +  +RT++FCNT++ CR+VEN L+R DR+G+  +V+ YH+A+    R  NL  F   +   P     VLVCTDRA+RG+DF ++PVDHVV+FDFP++P+EY+RRVGR       G  TVLA+G QLP AR VM
Sbjct:  323 TQFVFVTATLPNDIAETVEKEFPGVVQIRGPGLHRVAPTVKERLVDVSVPPQFNRDASFCFDVKSEHLLKALRETRCRRTLIFCNTVESCRKVENLLKRSDRRGQVLEVIAYHNALTPDVRNQNLNIFSSGRQGAPEKTDYVLVCTDRAARGVDFDAAPVDHVVIFDFPKDPAEYVRRVGRTARAGRTGTSTVLAFGWQLPIARKVM 529          
BLAST of mRNA_D-dudresnayi_contig9479.28283.1 vs. uniprot
Match: A0A7S4DKM7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKM7_HETAK)

HSP 1 Score: 203 bits (517), Expect = 3.750e-59
Identity = 101/203 (49.75%), Postives = 140/203 (68.97%), Query Frame = 1
Query:    1 TQFLFVTATLPEVVVKQIEAEFPEVMTLRGPGLHRVAPSVNETLVDCSGPGVQARGIAQVYTNKRKALVTALESSEAQRTVVFCNTIDQCRRVENALQRQDRQGRARQVLCYHSAIEAAAREANLVEFCRAKLKQPAVLVCTDRASRGMDFQSSPVDHVVLFDFPQEPSEYLRRVGRXXXXXXXGKVTVLAYGKQLPAARAVM 609
            TQF+FVTATLP  V  Q+  EFP+V  + GPGLH+V+P++ + ++DCSGP  + +     + +KR AL   + +  A RT+VFCNTI+ CR+VENAL+R D++G    +L YH+AIE   R  +L  F R+    P VL+CTDRASRGMDF+ + VDHVVLFDFP++ +EY+RRVGR       G+VT L +G+QL  AR ++
Sbjct:  299 TQFVFVTATLPGEVADQVAGEFPDVKQVIGPGLHKVSPNLEQVIIDCSGPEGEKKTEETGFAHKRAALAQLMLTVRAHRTLVFCNTIENCRKVENALRRLDKRGDKHILLPYHNAIEPQKRGEHLRTFMRSNSLNPMVLICTDRASRGMDFEQAEVDHVVLFDFPRDAAEYVRRVGRTARAGRKGRVTALVFGRQLGLAREII 501          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9479.28283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CPS5_9STRA2.980e-6958.62P-loop containing nucleoside triphosphate hydrolas... [more]
A0A1E7FAF1_9STRA1.660e-6552.88p-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2V2H4_9STRA5.560e-6451.23Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1Z5KQ17_FISSO9.480e-6351.49ATP-dependent RNA helicase DDX18/HAS1 n=2 Tax=Fist... [more]
A0A7S1GM49_CYCTE8.580e-6251.71Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A448ZKM4_9STRA3.380e-6052.40Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
I2CPE5_NANGC4.340e-6055.67Uncharacterized protein (Fragment) n=1 Tax=Nannoch... [more]
B7G340_PHATC2.770e-5952.40Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S2Y9X7_9STRA3.670e-5950.72Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S4DKM7_HETAK3.750e-5949.75Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9479contigD-dudresnayi_contig9479:10892..11595 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score205.7
Seed ortholog evalue2.1e-50
Seed eggNOG ortholog2850.Phatr47365
KEGG koko:K13179
GOsGO:0000003,GO:0001101,GO:0002376,GO:0003674,GO:0003676,GO:0003677,GO:0003724,GO:0003824,GO:0003916,GO:0003917,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006265,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006955,GO:0006968,GO:0006996,GO:0007049,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009058,GO:0009059,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0009620,GO:0009719,GO:0009723,GO:0009725,GO:0009751,GO:0009753,GO:0009814,GO:0009817,GO:0009987,GO:0010033,GO:0010501,GO:0014070,GO:0016043,GO:0016070,GO:0016462,GO:0016604,GO:0016605,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0022414,GO:0031974,GO:0031981,GO:0032870,GO:0034641,GO:0034645,GO:0035690,GO:0042221,GO:0042493,GO:0042623,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045087,GO:0046483,GO:0046677,GO:0050832,GO:0050896,GO:0051276,GO:0051321,GO:0051704,GO:0051707,GO:0051716,GO:0070013,GO:0070035,GO:0070887,GO:0071103,GO:0071229,GO:0071236,GO:0071310,GO:0071369,GO:0071395,GO:0071407,GO:0071446,GO:0071495,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0098542,GO:0140097,GO:0140098,GO:1901360,GO:1901363,GO:1901576,GO:1901700,GO:1901701
EggNOG free text desc.helicase superfamily c-terminal domain
EggNOG OGs2XCZA@2836,COG0513@1,KOG0331@2759
EC3.6.4.13
COG Functional cat.A
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009,ko03041
Hectar predicted targeting categoryother localisation
Exons2
Model size609
Cds size609
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930894.4013805-CDS-D-dudresnayi_contig9479:10891..110351622930894.4013805-CDS-D-dudresnayi_contig9479:10891..11035Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9479 10892..11035 -
1690557955.7763474-CDS-D-dudresnayi_contig9479:10891..110351690557955.7763474-CDS-D-dudresnayi_contig9479:10891..11035Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9479 10892..11035 -
1622930894.4210799-CDS-D-dudresnayi_contig9479:11130..115951622930894.4210799-CDS-D-dudresnayi_contig9479:11130..11595Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9479 11131..11595 -
1690557955.7890954-CDS-D-dudresnayi_contig9479:11130..115951690557955.7890954-CDS-D-dudresnayi_contig9479:11130..11595Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9479 11131..11595 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9479.28283.1prot_D-dudresnayi_contig9479.28283.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9479 10892..11595 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9479.28283.1

>prot_D-dudresnayi_contig9479.28283.1 ID=prot_D-dudresnayi_contig9479.28283.1|Name=mRNA_D-dudresnayi_contig9479.28283.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=203bp
TQFLFVTATLPEVVVKQIEAEFPEVMTLRGPGLHRVAPSVNETLVDCSGP
GVQARGIAQVYTNKRKALVTALESSEAQRTVVFCNTIDQCRRVENALQRQ
DRQGRARQVLCYHSAIEAAAREANLVEFCRAKLKQPAVLVCTDRASRGMD
FQSSPVDHVVLFDFPQEPSEYLRRVGRTGRAGRQGKVTVLAYGKQLPAAR
AVM
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mRNA from alignment at D-dudresnayi_contig9479:10892..11595-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9479.28283.1 ID=mRNA_D-dudresnayi_contig9479.28283.1|Name=mRNA_D-dudresnayi_contig9479.28283.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=704bp|location=Sequence derived from alignment at D-dudresnayi_contig9479:10892..11595- (Desmarestia dudresnayi DdudBR16 monoicous)
ACACAATTCCTCTTTGTAACCGCCACTCTCCCCGAGGTGGTAGTCAAGCA GATCGAGGCGGAGTTCCCGGAGGTGATGACTTTGAGAGGTCCGGGGCTGC ACCGGGTGGCGCCTAGTGTCAACGAGACCCTGGTGGACTGCAGTGGACCC GGTGTGCAGGCGCGCGGCATAGCGCAGGTGTATACCAACAAGCGCAAAGC TTTAGTGACAGCACTGGAGAGTAGTGAGGCGCAGCGCACAGTGGTGTTTT GCAACACGATCGACCAGTGCAGGCGCGTGGAGAACGCCTTGCAGAGACAG GACCGCCAGGGCAGGGCCAGGCAGGTGCTCTGCTACCACAGCGCCATCGA GGCCGCCGCTAGAGAGGCCAATTTGGTGGAGTTCTGTCGCGCTAAACTGA AGCAGCCGGCGGTGCTGGTCTGCACGGACAGGGCGTCCAGGGGCATGGAC TTCCAGAGCTCCCCGGTAAGACCACCATGCTGCTTACTGTGATCTTATAG AGCTTCTCTCCCCTCATACTCCCTTTCTCTTTTTTTTTGCATTATCCACT GGAAGCACAGGTGGACCATGTGGTGCTGTTCGACTTCCCCCAGGAGCCCA GCGAGTACCTGCGGCGTGTGGGGCGCACGGGGCGCGCTGGCAGACAGGGG AAGGTCACCGTGTTGGCCTACGGCAAACAGCTTCCTGCAGCCCGCGCAGT GATG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9479:10892..11595-

>mRNA_D-dudresnayi_contig9479.28283.1 ID=mRNA_D-dudresnayi_contig9479.28283.1|Name=mRNA_D-dudresnayi_contig9479.28283.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1218bp|location=Sequence derived from alignment at D-dudresnayi_contig9479:10892..11595- (Desmarestia dudresnayi DdudBR16 monoicous)
ACACAATTCCTCTTTGTAACCGCCACTCTCCCCGAGGTGGTAGTCAAGCA
GATCGAGGCGGAGTTCCCGGAGGTGATGACTTTGAGAGGTCCGGGGCTGC
ACCGGGTGGCGCCTAGTGTCAACGAGACCCTGGTGGACTGCAGTGGACCC
GGTGTGCAGGCGCGCGGCATAGCGCAGGTGTATACCAACAAGCGCAAAGC
TTTAGTGACAGCACTGGAGAGTAGTGAGGCGCAGCGCACAGTGGTGTTTT
GCAACACGATCGACCAGTGCAGGCGCGTGGAGAACGCCTTGCAGAGACAG
GACCGCCAGGGCAGGGCCAGGCAGGTGCTCTGCTACCACAGCGCCATCGA
GGCCGCCGCTAGAGAGGCCAATTTGGTGGAGTTCTGTCGCGCTAAACTGA
AGCAGCCGGCGGTGCTGGTCTGCACGGACAGGGCGTCCAGGGGCATGGAC
TTCCAGAGCTCCCCGACACAATTCCTCTTTGTAACCGCCACTCTCCCCGA
GGTGGTAGTCAAGCAGATCGAGGCGGAGTTCCCGGAGGTGATGACTTTGA
GAGGTCCGGGGCTGCACCGGGTGGCGCCTAGTGTCAACGAGACCCTGGTG
GACTGCAGTGGACCCGGTGTGCAGGCGCGCGGCATAGCGCAGGTGTATAC
CAACAAGCGCAAAGCTTTAGTGACAGCACTGGAGAGTAGTGAGGCGCAGC
GCACAGTGGTGTTTTGCAACACGATCGACCAGTGCAGGCGCGTGGAGAAC
GCCTTGCAGAGACAGGACCGCCAGGGCAGGGCCAGGCAGGTGCTCTGCTA
CCACAGCGCCATCGAGGCCGCCGCTAGAGAGGCCAATTTGGTGGAGTTCT
GTCGCGCTAAACTGAAGCAGCCGGCGGTGCTGGTCTGCACGGACAGGGCG
TCCAGGGGCATGGACTTCCAGAGCTCCCCGGTGGACCATGTGGTGCTGTT
CGACTTCCCCCAGGAGCCCAGCGAGTACCTGCGGCGTGTGGGGCGCACGG
GGCGCGCTGGCAGACAGGGGAAGGTCACCGTGTTGGCCTACGGCAAACAG
CTTCCTGCAGCCCGCGCAGTGATGGTGGACCATGTGGTGCTGTTCGACTT
CCCCCAGGAGCCCAGCGAGTACCTGCGGCGTGTGGGGCGCACGGGGCGCG
CTGGCAGACAGGGGAAGGTCACCGTGTTGGCCTACGGCAAACAGCTTCCT
GCAGCCCGCGCAGTGATG
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