mRNA_D-dudresnayi_contig9452.28257.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9452.28257.1
Unique NamemRNA_D-dudresnayi_contig9452.28257.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
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BLAST of mRNA_D-dudresnayi_contig9452.28257.1 vs. uniprot
Match: X0RYE1_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0RYE1_9ZZZZ)

HSP 1 Score: 145 bits (367), Expect = 6.820e-41
Identity = 65/90 (72.22%), Postives = 78/90 (86.67%), Query Frame = 1 
Query:    4 AVDYWALGVLIFEMVVGAPPFYAEDPMEVYEKILSGNPAMPTFFTRNLSDLIKKLLRSQQGKRLGNTRGGTAAVVKHKWFSSFDWAAIEN 273
            AVDYWALGVLI+EM  G+PPFYA+DPMEVYEKILSG+ ++P+ F+R LSDL+KKLLR+ Q KRLG T+GGTAAV+KHKWFS FDW  + N
Sbjct:  181 AVDYWALGVLIYEMTAGSPPFYADDPMEVYEKILSGHVSIPSHFSRGLSDLVKKLLRTYQSKRLGRTKGGTAAVMKHKWFSGFDWDTLMN 270
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BLAST of mRNA_D-dudresnayi_contig9452.28257.1 vs. uniprot
Match: A0A7S2LD17_9STRA (cGMP-dependent protein kinase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LD17_9STRA)

HSP 1 Score: 142 bits (357), Expect = 2.310e-37
Identity = 61/89 (68.54%), Postives = 77/89 (86.52%), Query Frame = 1 
Query:    1 LAVDYWALGVLIFEMVVGAPPFYAEDPMEVYEKILSGNPAMPTFFTRNLSDLIKKLLRSQQGKRLGNTRGGTAAVVKHKWFSSFDWAAI 267
            + VDYWALGVL++EM  G+PPFYA+DPMEVYEKILSG+  +P +F+R LSDL+KKLL++ Q KRLG T+GGT+AV+KHKWFS FDW A+
Sbjct:  585 MGVDYWALGVLVYEMTAGSPPFYADDPMEVYEKILSGHIFIPAYFSRGLSDLVKKLLKTYQSKRLGKTKGGTSAVMKHKWFSGFDWDAL 673
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BLAST of mRNA_D-dudresnayi_contig9452.28257.1 vs. uniprot
Match: A0A7S1U5U3_9STRA (cGMP-dependent protein kinase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5U3_9STRA)

HSP 1 Score: 141 bits (356), Expect = 2.850e-37
Identity = 65/91 (71.43%), Postives = 76/91 (83.52%), Query Frame = 1 
Query:    1 LAVDYWALGVLIFEMVVGAPPFYAEDPMEVYEKILSGNPAMPTFFTRNLSDLIKKLLRSQQGKRLGNTRGGTAAVVKHKWFSSFDWAAIEN 273
            L+VDYWALGVLI+EMV G PPFYAEDPMEVYEKILS +  +P  F++ L+D+I+KLL+ QQ KRLGNTRGGT AVVKHKWFS FDW  + N
Sbjct:  558 LSVDYWALGVLIYEMVSGLPPFYAEDPMEVYEKILSVHYTIPPTFSKMLADIIRKLLKQQQSKRLGNTRGGTHAVVKHKWFSGFDWQGLRN 648
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BLAST of mRNA_D-dudresnayi_contig9452.28257.1 vs. uniprot
Match: B8C5K5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5K5_THAPS)

HSP 1 Score: 133 bits (334), Expect = 4.860e-36
Identity = 58/88 (65.91%), Postives = 74/88 (84.09%), Query Frame = 1 
Query:    4 AVDYWALGVLIFEMVVGAPPFYAEDPMEVYEKILSGNPAMPTFFTRNLSDLIKKLLRSQQGKRLGNTRGGTAAVVKHKWFSSFDWAAI 267
            AVDYWALGVLI+EM  G PPFYAEDPMEVYEKILSG+  +P+ F+R L++L+KKLL++ Q KRLG T+GG ++V+K KWFS FDW ++
Sbjct:  195 AVDYWALGVLIYEMTAGTPPFYAEDPMEVYEKILSGHVTIPSHFSRGLAELVKKLLKTFQSKRLGRTKGGASSVMKQKWFSGFDWNSL 282
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BLAST of mRNA_D-dudresnayi_contig9452.28257.1 vs. uniprot
Match: A0A7S2CDL2_9STRA (cGMP-dependent protein kinase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CDL2_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.800e-34
Identity = 59/88 (67.05%), Postives = 72/88 (81.82%), Query Frame = 1 
Query:    4 AVDYWALGVLIFEMVVGAPPFYAEDPMEVYEKILSGNPAMPTFFTRNLSDLIKKLLRSQQGKRLGNTRGGTAAVVKHKWFSSFDWAAI 267
            AVDYWALGVLI+EMV G PPFYA+DPMEVYEKILS    +PT F++NLSD+++KLL+  Q KRLGN +GG +A+VKHKWF  FDW  +
Sbjct:  596 AVDYWALGVLIYEMVAGEPPFYADDPMEVYEKILSATMQIPTRFSKNLSDIVRKLLKIYQSKRLGNGKGGCSAIVKHKWFYGFDWELL 683
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BLAST of mRNA_D-dudresnayi_contig9452.28257.1 vs. uniprot
Match: A0A835YTZ8_9STRA (cGMP-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTZ8_9STRA)

HSP 1 Score: 129 bits (323), Expect = 6.570e-33
Identity = 56/88 (63.64%), Postives = 70/88 (79.55%), Query Frame = 1 
Query:    4 AVDYWALGVLIFEMVVGAPPFYAEDPMEVYEKILSGNPAMPTFFTRNLSDLIKKLLRSQQGKRLGNTRGGTAAVVKHKWFSSFDWAAI 267
            AVDYWALGVL+FEMV G PPFYA+DPM  YEKIL  N  +P +F++NL D++ KLL+S + KRLG TRGG  AV+KHKW+S F+W A+
Sbjct:  455 AVDYWALGVLMFEMVAGTPPFYADDPMATYEKILGNNLHIPDYFSKNLRDILHKLLKSNKTKRLGKTRGGAGAVMKHKWYSGFNWDAL 542
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BLAST of mRNA_D-dudresnayi_contig9452.28257.1 vs. uniprot
Match: A0A7S2PHB5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PHB5_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.300e-32
Identity = 54/87 (62.07%), Postives = 64/87 (73.56%), Query Frame = 1 
Query:    7 VDYWALGVLIFEMVVGAPPFYAEDPMEVYEKILSGNPAMPTFFTRNLSDLIKKLLRSQQGKRLGNTRGGTAAVVKHKWFSSFDWAAI 267
            VDYW LGVLI+EM  G  PFYAE PME YEK LSG+  MPT F+R+ ++LIKKLL + Q KRLG T GG   V+ H WFS+FDW A+
Sbjct:    8 VDYWGLGVLIYEMTAGVAPFYAESPMETYEKALSGHVHMPTHFSRSAANLIKKLLHTSQAKRLGRTVGGATTVMCHPWFSNFDWDAL 94
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BLAST of mRNA_D-dudresnayi_contig9452.28257.1 vs. uniprot
Match: K0S242_THAOC (AGC-kinase C-terminal domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S242_THAOC)

HSP 1 Score: 125 bits (315), Expect = 7.520e-32
Identity = 56/88 (63.64%), Postives = 70/88 (79.55%), Query Frame = 1 
Query:    4 AVDYWALGVLIFEMVVGAPPFYAEDPMEVYEKILSGNPAMPTFFTRNLSDLIKKLLRSQQGKRLGNTRGGTAAVVKHKWFSSFDWAAI 267
            AVDYWALGVLI+EM  G PPFYA++PM VYEKILSG   +P+ F+R L DL+KKLL++ Q KRLG T+GG  +V+K KWFS FDW ++
Sbjct:  434 AVDYWALGVLIYEMTNGVPPFYADEPMGVYEKILSGIVTVPSHFSRGLGDLVKKLLKTFQSKRLGRTKGGAGSVMKQKWFSGFDWNSL 521
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BLAST of mRNA_D-dudresnayi_contig9452.28257.1 vs. uniprot
Match: K0R993_THAOC (cGMP-dependent protein kinase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R993_THAOC)

HSP 1 Score: 125 bits (315), Expect = 1.350e-31
Identity = 56/88 (63.64%), Postives = 70/88 (79.55%), Query Frame = 1 
Query:    4 AVDYWALGVLIFEMVVGAPPFYAEDPMEVYEKILSGNPAMPTFFTRNLSDLIKKLLRSQQGKRLGNTRGGTAAVVKHKWFSSFDWAAI 267
            AVDYWALGVLI+EM  G PPFYA++PM VYEKILSG   +P+ F+R L DL+KKLL++ Q KRLG T+GG  +V+K KWFS FDW ++
Sbjct:  636 AVDYWALGVLIYEMTNGVPPFYADEPMGVYEKILSGIVTVPSHFSRGLGDLVKKLLKTFQSKRLGRTKGGAGSVMKQKWFSGFDWNSL 723
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BLAST of mRNA_D-dudresnayi_contig9452.28257.1 vs. uniprot
Match: A0A8J2SQS7_9STRA (cGMP-dependent protein kinase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SQS7_9STRA)

HSP 1 Score: 124 bits (312), Expect = 3.470e-31
Identity = 56/92 (60.87%), Postives = 70/92 (76.09%), Query Frame = 1 
Query:    4 AVDYWALGVLIFEMVVGAPPFYAEDPMEVYEKILSGNPAMPTFFTRNLSDLIKKLLRSQQGKRLGNTRGGTAAVVKHKWFSSFDWAAIENGE 279
            AVDYWALGVLI+E+V G PPFYA+DPM+VYEKILS N A P+ F R L+D+++KLL+  Q KRLGN R G  A+ KH+WFS F W  +  G+
Sbjct:  658 AVDYWALGVLIYELVAGVPPFYADDPMDVYEKILSANMAFPSHFGRYLNDVVRKLLKLCQSKRLGNGRQGVGAIKKHRWFSGFGWDDLLEGK 749
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9452.28257.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
X0RYE1_9ZZZZ6.820e-4172.22Uncharacterized protein n=1 Tax=marine sediment me... [more]
A0A7S2LD17_9STRA2.310e-3768.54cGMP-dependent protein kinase n=1 Tax=Leptocylindr... [more]
A0A7S1U5U3_9STRA2.850e-3771.43cGMP-dependent protein kinase n=1 Tax=Phaeomonas p... [more]
B8C5K5_THAPS4.860e-3665.91Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2CDL2_9STRA1.800e-3467.05cGMP-dependent protein kinase n=1 Tax=Florenciella... [more]
A0A835YTZ8_9STRA6.570e-3363.64cGMP-dependent protein kinase n=1 Tax=Tribonema mi... [more]
A0A7S2PHB5_9STRA1.300e-3262.07Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
K0S242_THAOC7.520e-3263.64AGC-kinase C-terminal domain-containing protein n=... [more]
K0R993_THAOC1.350e-3163.64cGMP-dependent protein kinase n=1 Tax=Thalassiosir... [more]
A0A8J2SQS7_9STRA3.470e-3160.87cGMP-dependent protein kinase n=1 Tax=Pelagomonas ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9452contigD-dudresnayi_contig9452:1686..2151 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score134.0
Seed ortholog evalue3.5e-29
Seed eggNOG ortholog35128.Thaps518
KEGG koko:K04345,ko:K07376,ko:K19584
KEGG Pathwayko01522,ko04010,ko04014,ko04020,ko04022,ko04024,ko04062,ko04113,ko04114,ko04138,ko04140,ko04211,ko04213,ko04261,ko04270,ko04310,ko04340,ko04341,ko04371,ko04530,ko04540,ko04611,ko04713,ko04714,ko04720,ko04723,ko04724,ko04725,ko04726,ko04727,ko04728,ko04730,ko04740,ko04742,ko04750,ko04910,ko04911,ko04912,ko04913,ko04914,ko04915,ko04916,ko04918,ko04919,ko04921,ko04922,ko04923,ko04924,ko04925,ko04926,ko04927,ko04934,ko04961,ko04962,ko04970,ko04971,ko04976,ko05012,ko05020,ko05030,ko05031,ko05032,ko05110,ko05146,ko05165,ko05166,ko05169,ko05200,ko05203,ko05205,ko05414,map01522,map04010,map04014,map04020,map04022,map04024,map04062,map04113,map04114,map04138,map04140,map04211,map04213,map04261,map04270,map04310,map04340,map04341,map04371,map04530,map04540,map04611,map04713,map04714,map04720,map04723,map04724,map04725,map04726,map04727,map04728,map04730,map04740,map04742,map04750,map04910,map04911,map04912,map04913,map04914,map04915,map04916,map04918,map04919,map04921,map04922,map04923,map04924,map04925,map04926,map04927,map04934,map04961,map04962,map04970,map04971,map04976,map05012,map05020,map05030,map05031,map05032,map05110,map05146,map05165,map05166,map05169,map05200,map05203,map05205,map05414
KEGG ModuleM00694,M00695
GOsGO:0000902,GO:0000904,GO:0003008,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004690,GO:0004692,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0006935,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007614,GO:0007616,GO:0007626,GO:0007631,GO:0008016,GO:0008045,GO:0008150,GO:0008152,GO:0008345,GO:0009605,GO:0009653,GO:0009743,GO:0009744,GO:0009889,GO:0009966,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010646,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019219,GO:0019222,GO:0019538,GO:0022008,GO:0023051,GO:0030030,GO:0030154,GO:0030182,GO:0030510,GO:0030536,GO:0030537,GO:0031175,GO:0031323,GO:0031326,GO:0032095,GO:0032101,GO:0032104,GO:0032107,GO:0032501,GO:0032502,GO:0032989,GO:0032990,GO:0034285,GO:0036211,GO:0040011,GO:0042221,GO:0042330,GO:0043170,GO:0043412,GO:0044057,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0046958,GO:0046959,GO:0048468,GO:0048583,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050794,GO:0050877,GO:0050890,GO:0050896,GO:0051171,GO:0051239,GO:0051252,GO:0060255,GO:0061564,GO:0065007,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090092,GO:0090287,GO:0097485,GO:0120036,GO:0120039,GO:0140096,GO:1901564,GO:1901700,GO:1903506,GO:1903522,GO:2000112,GO:2001141
EggNOG free text desc.cAMP-dependent protein kinase activity
EggNOG OGsKOG0616@1,KOG0616@2759
EC2.7.11.11,2.7.11.12
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03019,ko03036
Hectar predicted targeting categorysignal peptide
Exons2
Model size284
Cds size282
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930890.5861928-CDS-D-dudresnayi_contig9452:1685..17371622930890.5861928-CDS-D-dudresnayi_contig9452:1685..1737Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9452 1686..1737 +
1690557954.5466003-CDS-D-dudresnayi_contig9452:1685..17371690557954.5466003-CDS-D-dudresnayi_contig9452:1685..1737Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9452 1686..1737 +
1622930890.6004837-CDS-D-dudresnayi_contig9452:1919..21491622930890.6004837-CDS-D-dudresnayi_contig9452:1919..2149Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9452 1920..2149 +
1690557954.5571234-CDS-D-dudresnayi_contig9452:1919..21491690557954.5571234-CDS-D-dudresnayi_contig9452:1919..2149Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9452 1920..2149 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9452.28257.1prot_D-dudresnayi_contig9452.28257.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9452 1686..2149 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9452.28257.1

>prot_D-dudresnayi_contig9452.28257.1 ID=prot_D-dudresnayi_contig9452.28257.1|Name=mRNA_D-dudresnayi_contig9452.28257.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=94bp
LAVDYWALGVLIFEMVVGAPPFYAEDPMEVYEKILSGNPAMPTFFTRNLS
DLIKKLLRSQQGKRLGNTRGGTAAVVKHKWFSSFDWAAIENGEA
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mRNA from alignment at D-dudresnayi_contig9452:1686..2151+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9452.28257.1 ID=mRNA_D-dudresnayi_contig9452.28257.1|Name=mRNA_D-dudresnayi_contig9452.28257.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=466bp|location=Sequence derived from alignment at D-dudresnayi_contig9452:1686..2151+ (Desmarestia dudresnayi DdudBR16 monoicous)
CTGGCGGTGGACTACTGGGCACTGGGTGTGCTGATCTTTGAGATGGTTGT
AGGTGAGTAGGGTTGCTGTTGTTGCTGCTGTGTAATGGTTACTGTTGGTG
GTTTTGTTTATGTTGTGTCTGCATTAGTGCTATTCTCCATATCATTGTCA
TTGGTTACTACTATATAAGTTAATCTCTACTATATACACATTTGTTTAAC
TGGATTGTACTATACTCTACACTCATACACACAGGTGCTCCTCCTTTCTA
CGCTGAGGATCCTATGGAAGTCTATGAGAAGATCCTCTCTGGCAACCCCG
CCATGCCAACTTTCTTCACCCGTAACCTGTCTGACCTCATTAAGAAGCTA
CTGCGCTCCCAGCAAGGTAAACGTCTGGGTAATACGCGTGGTGGCACTGC
TGCAGTAGTGAAGCATAAGTGGTTCTCTTCATTCGATTGGGCTGCGATTG
AGAATGGTGAGGCGAA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9452:1686..2151+

>mRNA_D-dudresnayi_contig9452.28257.1 ID=mRNA_D-dudresnayi_contig9452.28257.1|Name=mRNA_D-dudresnayi_contig9452.28257.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=564bp|location=Sequence derived from alignment at D-dudresnayi_contig9452:1686..2151+ (Desmarestia dudresnayi DdudBR16 monoicous)
CTGGCGGTGGACTACTGGGCACTGGGTGTGCTGATCTTTGAGATGGTTGT
AGCTGGCGGTGGACTACTGGGCACTGGGTGTGCTGATCTTTGAGATGGTT
GTAGGTGCTCCTCCTTTCTACGCTGAGGATCCTATGGAAGTCTATGAGAA
GATCCTCTCTGGCAACCCCGCCATGCCAACTTTCTTCACCCGTAACCTGT
CTGACCTCATTAAGAAGCTACTGCGCTCCCAGCAAGGTAAACGTCTGGGT
AATACGCGTGGTGGCACTGCTGCAGTAGTGAAGCATAAGTGGTTCTCTTC
ATTCGATTGGGCTGCGATTGAGAATGGTGAGGCGGTGCTCCTCCTTTCTA
CGCTGAGGATCCTATGGAAGTCTATGAGAAGATCCTCTCTGGCAACCCCG
CCATGCCAACTTTCTTCACCCGTAACCTGTCTGACCTCATTAAGAAGCTA
CTGCGCTCCCAGCAAGGTAAACGTCTGGGTAATACGCGTGGTGGCACTGC
TGCAGTAGTGAAGCATAAGTGGTTCTCTTCATTCGATTGGGCTGCGATTG
AGAATGGTGAGGCG
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