mRNA_D-dudresnayi_contig9451.28255.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9451.28255.1
Unique NamemRNA_D-dudresnayi_contig9451.28255.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
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BLAST of mRNA_D-dudresnayi_contig9451.28255.1 vs. uniprot
Match: D7FWE7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE7_ECTSI)

HSP 1 Score: 406 bits (1044), Expect = 1.130e-133
Identity = 221/380 (58.16%), Postives = 270/380 (71.05%), Query Frame = 2 
Query:    5 DWIVAQTFMGITTCYKHDSDGSLWVKLHGTMEGVRVMDQLATVREVDLFKTWVPFCDKSTLLKRLGIVELLVHFNTTVPGCSRDCVMHAYGCDSVLEDNCILIQGRSVDSW-EGVEIPQVKGWRHARMDIRAFRAKFEVLSPTSACTSIVTNVDLKVPLPRTVVNFLLRKVAGMFLYCLKQAARRITTDDNNHHRLRILEDEEFYKHWLYPRFQQFYSSRGWSFD----GGFPAAEGTSSRRAAEQSCGRS-CKSVKTNLESRRFCGRFRLQAAQGTKRSFRYFRKTRQQGNSGNISTPQPQVETLGIDPRLLERWQARRETRLRDGGKSRASSARLVVYTLAAMFAAFMRWLCVSDAREAYHARAYVTVVVLAAILLAN 1126
            DW+VAQTFMGITT YK D DGSLW+K+HGTM+ V VMDQLA VREVDLF  WVPFCD S LLKRLGIVELLV+F+ ++PG  RDCV+HAYGCDSVLE  CILIQGRSV+   EGVE+PQVKGWRHARMD+RAFRAK EVLSPTSA TSIV NVD K P+P++VVNF++RK+AGMFLYCLKQ A+ I  D+ N HR RI+ED+ FYK WL+PRF++FY  +GW+ D    GG PA     S+ + E + GR+ C + KT   S   C  FR +A    K SF+  + TR+   +     P PQVE LGID RLLE+WQA+R+ R     ++R   ARL+   L A+ AA++RW   S+ R A   R     V +A +LLA 
Sbjct:   94 DWLVAQTFMGITTFYKVDPDGSLWIKMHGTMDDVTVMDQLAVVREVDLFNKWVPFCDTSKLLKRLGIVELLVYFSMSIPGVGRDCVLHAYGCDSVLETGCILIQGRSVEEVPEGVEVPQVKGWRHARMDVRAFRAKIEVLSPTSARTSIVANVDPKAPVPQSVVNFVVRKMAGMFLYCLKQTAKCIRADEGNCHRRRIVEDKAFYKGWLFPRFERFYRRQGWTVDEELGGGEPA-----SKLSDEPTGGRAWCPNGKTMSLSHGTCTPFRRKAGSQLKNSFKRLKTTRRPRPTVTAELPPPQVENLGIDERLLEKWQAKRDNR-----RNRTGGARLLGSILFAVCAAWVRWAFTSEERAAARVRDISWFVCVATVLLAT 463
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BLAST of mRNA_D-dudresnayi_contig9451.28255.1 vs. uniprot
Match: A0A7S2L8G5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L8G5_9STRA)

HSP 1 Score: 203 bits (517), Expect = 4.860e-54
Identity = 101/225 (44.89%), Postives = 146/225 (64.89%), Query Frame = 2 
Query:    2 DDWIVAQTFMGITTCYKHDSDGSLWVKLHGTMEGVRVMDQLATVREVDLFKTWVPFCDKSTLLKRLGIVELLVHFNTTVP--GCSRDCVMHAYGCDSVLEDNCILIQGRSVDSWEGVEIPQVKGW-RHARMDIRAFRAKFEVLSPTSACTSIVTNVDLKVPLPRTVVNFLLRKVAGMFLYCLKQAARRITTDDNNHHRLRILEDEEFYKHWLYPRFQQFYSSRGW 667
            DDW +AQT  GITT Y+ + DG+L VKL G + GV + +QLA +REVDL+  W PFC K+  L ++G +E++ H   +VP  G SRD    A GCD + ED  I+I   SVD + G+EIP        ARM +R+F+AK +VLSP+SA T +V N+D K+ LP+ +++F ++K+AG+ L CL+  A+++  +    H  RI ED EFY+ WL P+F+Q+    GW
Sbjct:   95 DDWTLAQTLFGITTSYRREEDGTLSVKLEGELSGVPLFEQLAVLREVDLYTEWAPFCSKADKLAQVGKIEVVAHQVMSVPLLGLSRDVAFRALGCDCMREDGSIIIVAASVDEFPGIEIPPAPTRIGSARMLLRSFQAKVDVLSPSSARTRLVANIDPKLALPQWLIDFSMKKIAGLVLVCLQSMAKKVMNNPERKHGKRIQEDSEFYRDWLLPKFEQYCHDLGW 319
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BLAST of mRNA_D-dudresnayi_contig9451.28255.1 vs. uniprot
Match: A0A835ZGQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGQ3_9STRA)

HSP 1 Score: 194 bits (492), Expect = 5.120e-51
Identity = 95/198 (47.98%), Postives = 130/198 (65.66%), Query Frame = 2 
Query:    5 DWIVAQTFMGITTCYKHD-SDGSLWVKLHGTMEGVRVMDQLATVREVDLFKTWVPFCDKSTLLKRLGIVELLVHFNTTVPGCSRDCVMHAYGCDSVLEDNCILIQGRSVDSWEGVEIPQVKGWRHARMDIRAFRAKFEVLSPTSACTSIVTNVDLKVPLPRTVVNFLLRKVAGMFLYCLKQAARRITTDDNNHHRLRI 595
            DWI AQ++MG++T YK D ++G+LWVKL G MEG  V+DQLA VRE+DL+  W+PFC  + +++ LG VEL+     ++P   RDCVMHAY CD +LED CIL+Q  S+D W                      A+ E+LSPTSA TS+V N+D K PLP++++NF+++K AG+ LY L +AA +I  D NN HR  I
Sbjct:  148 DWIFAQSYMGVSTYYKKDPTNGTLWVKLSGVMEGCNVLDQLAVVREIDLYSLWMPFCSAARVIRYLGRVELIGWLEVSMPAFVRDCVMHAYACDCILEDKCILLQSSSIDEWP---------------------ARIEMLSPTSAGTSMVANIDPKAPLPQSLINFIMKKAAGVMLYFLVRAASKIPNDVNNAHRRSI 324
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BLAST of mRNA_D-dudresnayi_contig9451.28255.1 vs. uniprot
Match: A0A485LPY2_9STRA (Aste57867_23981 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPY2_9STRA)

HSP 1 Score: 187 bits (475), Expect = 5.470e-47
Identity = 99/221 (44.80%), Postives = 138/221 (62.44%), Query Frame = 2 
Query:    8 WIVAQTFMGITTCYKHDSDGSLWVKLHGTMEGVRVMDQLATVREVDLFKTWVPFCDKSTLLKRLGIVELLVHFNTTVPGCSRDCVMHAYGCDSVLEDNCILIQGRSV--DSWEGVEIPQVKGWRHARMDIRAFRAKFEVLSPTSACTSIVTNVDLKVPLPRTVVNFLLRKVAGMFLYCLKQAARRI---TTDDNNHHRLRILEDEEFYKHWLYPRFQQFYS 655
            W   QT+ G++T +K    G++W+KL G  EGV V + LA VRE DLF  WVPFC+K+TLL  L  VEL+ + +  +P   RD V+HA+G ++  E  CIL+ G+S   D+   V+ P VKGW   RMD+R FRA  E    T A   IV NVD K P+P++++NF ++K+AG+ LY L + A++I   T D+ N H  RIL D  FYK WL PR   +++
Sbjct:  622 WRFGQTYFGVSTHWKPGESGTVWLKLDGICEGVDVFNTLAVVRETDLFHQWVPFCNKATLLANLARVELVTYVSIAIPLMQRDAVIHAFGINATYEHRCILLLGKSAVQDAHPDVQFPPVKGWNSDRMDLRGFRALIEPYGRTRARMCIVVNVDPKCPVPQSLLNFTIKKMAGILLYLLMKEAQKIERNTADERNPHVARILHDP-FYK-WLKPRMDTWFT 840
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BLAST of mRNA_D-dudresnayi_contig9451.28255.1 vs. uniprot
Match: A0A1V9ZA82_9STRA (Transmembrane protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZA82_9STRA)

HSP 1 Score: 180 bits (457), Expect = 9.670e-45
Identity = 93/224 (41.52%), Postives = 135/224 (60.27%), Query Frame = 2 
Query:    8 WIVAQTFMGITTCYKHDSDGSLWVKLHGTMEGVRVMDQLATVREVDLFKTWVPFCDKSTLLKRLGIVELLVHFNTTVPGCSRDCVMHAYGCDSVLEDNCILIQGRSVDSWE----GVEIPQVKGWRHARMDIRAFRAKFEVLSPTSACTSIVTNVDLKVPLPRTVVNFLLRKVAGMFLYCLKQAARRITTDDNNH-----HRLRILEDEEFYKHWLYPRFQQFY 652
            W  AQT+ G++T +K   DG++W+KL G  EGV + + LA +RE DLF  W PFC++S LL  LG VEL+ + +  +P   RD ++HA+G ++  E  CI++ G+S+   +     +E P +KGW   RMD+RAFRA  E      A T IV NV  K P+P T++NF ++K+AG+ LY L + A +I    N H     H  RI  D  FY  WL+PR Q+++
Sbjct:  516 WRFAQTYFGVSTHWKPGDDGTIWLKLDGICEGVDIFNALAVIRETDLFHLWAPFCNRSELLANLGRVELIAYMSLAIPLMQRDAIVHAFGINATYEHRCIVLLGKSITEDQCPVNNLEFPPIKGWNADRMDLRAFRALIEPYGRNRARTCIVVNVHPKCPVPMTLLNFTIKKMAGILLYLLMREAGKIEKHKNEHDPTNEHAKRIRNDP-FYL-WLHPRMQKWF 737
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BLAST of mRNA_D-dudresnayi_contig9451.28255.1 vs. uniprot
Match: I2CQT7_NANGC (Transmembrane protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQT7_NANGC)

HSP 1 Score: 177 bits (449), Expect = 2.750e-44
Identity = 90/226 (39.82%), Postives = 138/226 (61.06%), Query Frame = 2 
Query:    8 WIVAQTFMGITTCYKHDSDGSLWVKLHGTMEGVRVMDQLATVREVDLFKTWVPFCDKSTLLKRLG---IVELLVHFNTTVPGCSRDCVMHAYGCDSVLEDNCILIQGRSVDSWEGVEIP-QVKGWRHARMDIRAFRAKFEVLSPTSACTSIVTNVDLKVPLPRTVVNFLLRKVAGMFLYCLKQAARRITTDD-NNHHRLRILEDEEFYKHWLYPRFQQFYSSRGWS 670
            WI AQ+  G+ T YK+D +G L+ K+ G  E   V+DQLA +RE DL+  W PF ++S +LKR G     ++ +HFN  +P  +RDCV+  Y CD  +ED  IL+   S +  EG+ +P +  GW   RMD++ FR K    SPTS    + + +D K  LP ++VNF  +++ G+ +Y L++A+R++  D   NHH  +I E+ +FY+HWL PR + +  + GWS
Sbjct:  191 WIFAQSLFGMDTYYKYD-EGKLYCKVEGDFENCAVLDQLAIIREGDLWNKWAPFVNRSAVLKRFGPTPSADMALHFNLNMPLLTRDCVVRGYACDG-MEDAVILLMADSTEELEGMPVPPKPTGWVVDRMDVKNFRCKITCKSPTSGRIVLSSILDPKTNLPPSLVNFATKQLVGVLIYLLQEASRKVKADPVKNHHAKKIREESDFYRHWLLPRARLYNKTHGWS 414
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BLAST of mRNA_D-dudresnayi_contig9451.28255.1 vs. uniprot
Match: D0N713_PHYIT (Transmembrane protein, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N713_PHYIT)

HSP 1 Score: 178 bits (452), Expect = 6.190e-44
Identity = 88/227 (38.77%), Postives = 135/227 (59.47%), Query Frame = 2 
Query:    2 DDWIVAQTFMGITTCYKHDSDGSLWVKLHGTMEGVRVMDQLATVREVDLFKTWVPFCDKSTLLKRLGIVELLVHFNTTVPGCSRDCVMHAYGCDSVLEDNCILIQGRSVDSWE---GVEIPQVKGWRHARMDIRAFRAKFEVLSPTSACTSIVTNVDLKVPLPRTVVNFLLRKVAGMFLYCLKQAARRITTDDN-------NHHRLRILEDEEFYKHWLYPRFQQFY 652
            DDW   QT +G+TT +K D DGS+W+KL G ++GV + + ++ +REVDL+  W PFC +S LL+ +G VEL  +   + P   RD ++ AYG ++V E NC+L+ G SVD       V +P ++GW   RM+I+ FRA  E L+   A T IV N+D K  +P+ ++NF ++K+AG+ LY +++ A +I  D         N H  RI  D   +  WL P   +++
Sbjct:  793 DDWQFGQTMLGVTTSWKPDDDGSVWIKLEGLVDGVDIFNTISVIREVDLYSVWTPFCSQSLLLQSMGHVELAAYLAISSPFLQRDAIIRAYGINAVYEHNCLLLLGGSVDVSSVNSAVPVPTLQGWNAGRMEIKGFRALIEPLTRMQARTCIVANIDPKCAIPKPMLNFGIKKMAGILLYLIRKEAEKIENDTKKTETSATNEHIRRITSDPSGFYTWLRPIVDKYF 1019
[Close]
BLAST of mRNA_D-dudresnayi_contig9451.28255.1 vs. uniprot
Match: A0A0P1APA9_PLAHL (START domain-containing proteins involved in steroidogenesis/phosphatidylcholine transfer n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APA9_PLAHL)

HSP 1 Score: 176 bits (447), Expect = 2.710e-43
Identity = 87/226 (38.50%), Postives = 134/226 (59.29%), Query Frame = 2 
Query:    5 DWIVAQTFMGITTCYKHDSDGSLWVKLHGTMEGVRVMDQLATVREVDLFKTWVPFCDKSTLLKRLGIVELLVHFNTTVPGCSRDCVMHAYGCDSVLEDNCILIQGRSVDS---WEGVEIPQVKGWRHARMDIRAFRAKFEVLSPTSACTSIVTNVDLKVPLPRTVVNFLLRKVAGMFLYCLKQAARRITTD-------DNNHHRLRILEDEEFYKHWLYPRFQQFY 652
            DW   QT +G+TT +K D DGS+W+KL G ++GV +   ++ +REVDL+  W+PFC +S LL+ +G VEL  +   + P   RD ++ A+G ++V E  C+L+ G SVD       V IP ++GW   RM+I+ FRA  E L+ T A T I+ N+D K  +P+ ++NF ++K+AG+ LY +++ A +I  D         N H  RI  D   +  WL P   +F+
Sbjct:  770 DWQFGQTMLGVTTSWKPDEDGSVWIKLEGLVDGVDIFHTISVIREVDLYSVWIPFCSQSLLLQEMGHVELAAYLAISSPFLQRDAIIRAFGINAVYEHRCLLLLGGSVDVSTITTSVSIPTLQGWSAGRMEIKGFRALIEPLTRTQARTCIIANLDPKCAIPKAMLNFGIKKMAGILLYLIRKEAEKIELDLKSSKASAGNEHLCRITNDPSGFYTWLRPIVDKFF 995
[Close]
BLAST of mRNA_D-dudresnayi_contig9451.28255.1 vs. uniprot
Match: G4YYS4_PHYSP (START domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YYS4_PHYSP)

HSP 1 Score: 176 bits (446), Expect = 3.730e-43
Identity = 86/224 (38.39%), Postives = 137/224 (61.16%), Query Frame = 2 
Query:    2 DDWIVAQTFMGITTCYKHDSDGSLWVKLHGTMEGVRVMDQLATVREVDLFKTWVPFCDKSTLLKRLGIVELLVHFNTTVPGCSRDCVMHAYGCDSVLEDNCILIQGRSVDS---WEGVEIPQVKGWRHARMDIRAFRAKFEVLSPTSACTSIVTNVDLKVPLPRTVVNFLLRKVAGMFLYCLKQAARRITTDDN----NHHRLRILEDEEFYKHWLYPRFQQFY 652
            D+W   QT +G+TT +K D+DGS+W+KL G ++GV + + ++ +REVDL+  W PFC +S LL+ +G VEL  +   + P   RD ++ A+G ++V E+ C+L+ G SVD       V +P ++GW   RM+I+ FRA  E L+ T A T IV N+D K  +P+ ++NF ++K+AG+ LY +++ A +I  D      N H  RI  D   +  WL P   +++
Sbjct:  814 DEWQFGQTMLGVTTSWKPDADGSVWIKLEGLVDGVYIFNTISVIREVDLYSVWTPFCSQSLLLQDMGHVELAAYLAISSPFLQRDAIIRAFGINAVYENRCLLLLGGSVDVSTVTSRVPVPTLQGWNAGRMEIKGFRALIEPLTRTQARTCIVANIDPKCAIPKAMLNFGIKKMAGILLYLIRKEAEKIEHDHKKNAANEHLRRINSDPSGFYTWLRPIVDKYF 1037
[Close]
BLAST of mRNA_D-dudresnayi_contig9451.28255.1 vs. uniprot
Match: A0A8K1CL62_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CL62_PYTOL)

HSP 1 Score: 176 bits (445), Expect = 5.230e-43
Identity = 92/234 (39.32%), Postives = 142/234 (60.68%), Query Frame = 2 
Query:    5 DWIVAQTFMGITTCYKHDSDGSLWVKLHGTMEGVRVMDQLATVREVDLFKTWVPFCDKSTLLKRLGIVELLVHFNTTVPGCSRDCVMHAYGCDSVLEDNCILIQGRSVDSWE---GVEIPQVKGWRHARMDIRAFRAKFEVLSPTSACTSIVTNVDLKVPLPRTVVNFLLRKVAGMFLYCLKQAARRI---------------TTDDNNHHRLRILEDEEFYKHWLYPRFQQFY 652
            DWI  Q++ G++T +K  +DG++W+KL G +EGV + + +A +RE+DLF +WVP C+KSTLL + G V+LLV+ +   P  SRD V+H  G ++  E   I++ G SVD  +   GV +P++  W   R+DIRAFRA    ++ T A T +V NVD K P+P++++NF ++KVAG+ LY L++ A +I               TT D   H  R+  D   +  WL P  +Q++
Sbjct:  120 DWIFGQSYFGVSTHWKPGADGTVWIKLDGEVEGVDLFNTIAVMREIDLFSSWVPLCNKSTLLHQDGPVDLLVYISMAFPLLSRDAVLHVLGINACYESRSIVLLGNSVDEAQVPAGVTVPKLTSWGSNRLDIRAFRALIAPITRTKARTCVVCNVDPKCPVPQSLINFAIKKVAGLLLYLLRREAEKIEKAQKDEAEGGPLAATTSD---HVRRLQADPYKFYEWLRPLVEQWF 350
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9451.28255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWE7_ECTSI1.130e-13358.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2L8G5_9STRA4.860e-5444.89Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A835ZGQ3_9STRA5.120e-5147.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A485LPY2_9STRA5.470e-4744.80Aste57867_23981 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9ZA82_9STRA9.670e-4541.52Transmembrane protein (Fragment) n=1 Tax=Thraustot... [more]
I2CQT7_NANGC2.750e-4439.82Transmembrane protein n=1 Tax=Nannochloropsis gadi... [more]
D0N713_PHYIT6.190e-4438.77Transmembrane protein, putative n=2 Tax=Phytophtho... [more]
A0A0P1APA9_PLAHL2.710e-4338.50START domain-containing proteins involved in stero... [more]
G4YYS4_PHYSP3.730e-4338.39START domain-containing protein n=4 Tax=Phytophtho... [more]
A0A8K1CL62_PYTOL5.230e-4339.32Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9451contigD-dudresnayi_contig9451:4628..8838 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score391.3
Seed ortholog evalue4.9e-106
Seed eggNOG ortholog2880.D7FWE7
Preferred namePCTP
GOsGO:0003674,GO:0005215,GO:0005319,GO:0005488,GO:0005543,GO:0005548,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006644,GO:0006650,GO:0006656,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008289,GO:0008525,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0010876,GO:0015711,GO:0015748,GO:0015914,GO:0016125,GO:0019637,GO:0031210,GO:0033036,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045017,GO:0046470,GO:0046474,GO:0046486,GO:0050997,GO:0051179,GO:0051234,GO:0070405,GO:0071702,GO:0071704,GO:0090407,GO:0097164,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1902652
EggNOG free text desc.lipid binding
EggNOG OGsKOG2761@1,KOG2761@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSTART-like domain
Ec32 orthologEc-09_003960.1
Exons4
Model size1693
Cds size1128
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9451.28255.1prot_D-dudresnayi_contig9451.28255.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9451 5165..8810 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930890.3715065-UTR-D-dudresnayi_contig9451:4627..51641622930890.3715065-UTR-D-dudresnayi_contig9451:4627..5164Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9451 4628..5164 -
1690557954.4639716-UTR-D-dudresnayi_contig9451:4627..51641690557954.4639716-UTR-D-dudresnayi_contig9451:4627..5164Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9451 4628..5164 -
1622930890.4721222-UTR-D-dudresnayi_contig9451:8810..88381622930890.4721222-UTR-D-dudresnayi_contig9451:8810..8838Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9451 8811..8838 -
1690557954.5182748-UTR-D-dudresnayi_contig9451:8810..88381690557954.5182748-UTR-D-dudresnayi_contig9451:8810..8838Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9451 8811..8838 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930890.3904576-CDS-D-dudresnayi_contig9451:5164..54281622930890.3904576-CDS-D-dudresnayi_contig9451:5164..5428Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9451 5165..5428 -
1690557954.4759915-CDS-D-dudresnayi_contig9451:5164..54281690557954.4759915-CDS-D-dudresnayi_contig9451:5164..5428Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9451 5165..5428 -
1622930890.4101384-CDS-D-dudresnayi_contig9451:5591..59811622930890.4101384-CDS-D-dudresnayi_contig9451:5591..5981Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9451 5592..5981 -
1690557954.4856074-CDS-D-dudresnayi_contig9451:5591..59811690557954.4856074-CDS-D-dudresnayi_contig9451:5591..5981Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9451 5592..5981 -
1622930890.4297805-CDS-D-dudresnayi_contig9451:6333..65831622930890.4297805-CDS-D-dudresnayi_contig9451:6333..6583Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9451 6334..6583 -
1690557954.4957602-CDS-D-dudresnayi_contig9451:6333..65831690557954.4957602-CDS-D-dudresnayi_contig9451:6333..6583Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9451 6334..6583 -
1622930890.4498107-CDS-D-dudresnayi_contig9451:8586..88101622930890.4498107-CDS-D-dudresnayi_contig9451:8586..8810Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9451 8587..8810 -
1690557954.506168-CDS-D-dudresnayi_contig9451:8586..88101690557954.506168-CDS-D-dudresnayi_contig9451:8586..8810Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9451 8587..8810 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9451.28255.1

>prot_D-dudresnayi_contig9451.28255.1 ID=prot_D-dudresnayi_contig9451.28255.1|Name=mRNA_D-dudresnayi_contig9451.28255.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=376bp
MGITTCYKHDSDGSLWVKLHGTMEGVRVMDQLATVREVDLFKTWVPFCDK
STLLKRLGIVELLVHFNTTVPGCSRDCVMHAYGCDSVLEDNCILIQGRSV
DSWEGVEIPQVKGWRHARMDIRAFRAKFEVLSPTSACTSIVTNVDLKVPL
PRTVVNFLLRKVAGMFLYCLKQAARRITTDDNNHHRLRILEDEEFYKHWL
YPRFQQFYSSRGWSFDGGFPAAEGTSSRRAAEQSCGRSCKSVKTNLESRR
FCGRFRLQAAQGTKRSFRYFRKTRQQGNSGNISTPQPQVETLGIDPRLLE
RWQARRETRLRDGGKSRASSARLVVYTLAAMFAAFMRWLCVSDAREAYHA
RAYVTVVVLAAILLANLLPVDFPGS*
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mRNA from alignment at D-dudresnayi_contig9451:4628..8838-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9451.28255.1 ID=mRNA_D-dudresnayi_contig9451.28255.1|Name=mRNA_D-dudresnayi_contig9451.28255.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=4211bp|location=Sequence derived from alignment at D-dudresnayi_contig9451:4628..8838- (Desmarestia dudresnayi DdudBR16 monoicous)
GGATGACTGGATTGTCGCGCAAACATTCATGGGCATAACGACCTGCTACA
AACATGATTCTGACGGGAGCCTGTGGGTAAAGTTGCATGGTACCATGGAA
GGAGTCCGAGTGATGGACCAATTAGCCACCGTTCGAGAAGTCGATTTGTT
CAAAACGTGGGTCCCCTTCTGCGACAAGTCTACGCTGCTCAAGCGCCTAG
GTATCGTGGAACTGCTGGTACACTTCAACACTACAGTGCCGGGATGCAGT
CGGTAGGTGGCGTGCGGGGATCGACAGTACGGCACTGCTACTACTACTGT
AGTAGTACTCTTTGAATATTTTTCAAGGCTTTTCACGGGATAAAATTTGT
CACTGGCACAGAAAGGGACGGGTCAGTAATGTCCCGTCCCGTCCGTTAAC
ATTTTTGTTTTATAATTTCCCATGCCGTCCCGTCTCGTTCCGTCCCTTAG
CATTCCTAAATTTTCCCGTCCCGTAATATGACATGAGAGAAATGCCGTTA
CGGACCTCACGGGACGCCCGTACATGGTTCCCATCCAAATACGACGGGAC
AAACGACGTGGAGATAATAATGTACCATTATATAGTATCTGTACATGATG
TAATATTTTGGTTGGCATTGTACGTTTGTACTGATTTCTGGACGGGTGCT
GATCCGTAGGGGACAAACGACGTGGGGATATTAATGTACCATTATATAGT
ATCTACAAGGGCGCCTGCCGGGCAGTTCACTGCCCGGCAGGCTCGCAGGA
GTTTAGGGCGCATGCCAAGGGTGTGAAAGACAATCCGTAATTAATACCGT
ACGTGTCGGTGGCGTGAAACATCGTATACCTAAGAGTAAGGGAGAATAGG
CGTAGGTAAAAAAACGTGTTTTCAATATTAATTAGAGGCGAGACGAAACA
CAAGCAGGAGACATACCGATGATGATATCATCCCCAAAATGGTATTAATA
TAGGCGTTTCTACCTAGTCCTATCTACTAAGCGCAGCTAGCCAATATTCC
ACGGTAGGTATCCGATAGCAGTACAGCAGCAGGAGTACGTTATTTCGTTT
TTTTATTTTTCGGTGTTTTCATAGTAGTGGGCCAACAACCAACAGTCACT
ATACGAGTCACGAGGTTTGCCCGCTTTTTTTTTTTTATTGGCCCTCGTAT
CGTACTATCATACGTATATACCTGTGCGACTACTACTACTACTACTACTG
TTGTGTCACAGCGCACCATCTCTATTTGACAGCATCTCTCCTCTAGCTAG
CACTCCTTTAGGCAGTAGTTTGCCAGCAGGCACTCTGCCGGTCACACCAG
CCAGCCCTCTCTGCTTATACATTCACCCCTCCTTTAGTCTGCAACAACGC
GTGTTGTCTTCATGGTTGTCTATAGCTGTTGATGAAGCTGTGCAATACGT
ATTATTCATTTCCCATGTATCTTGCCAGATTTGTTTTTTCCTACGTGATG
AGCGTCCCCAATAACTGTCTCTCTCAGTGGCCCTGCTCTCCATACACGCC
ACGCCATCTATCTGTATCTGCTCTCCTGCCTCGGGTCAGTGTAAGCGAAC
GTGCTGGACGATGATGAGTAGGAGGTATGGGAGCCTATTACTACTGTTGT
TGCAGAGCGTGCAAAAAACGGTCAAATACTCGAACTCTGGCTCTTGTGGT
GGACCATTCGGTATGTTTTTGCGTATCTTGGGACAGAAAGAAGATAAAAC
CACCCGAATCTCCGCGGCTCTTCTCGGCGGGCATCGCGGTGTCACCACGA
TGCCGCCTGTGTCCATAAACGATATCGCAACACTCGCAATTAGTATAGAA
TCAGGATTTGGTGCCCTGTGAGCCATTTGGGACAATCGTATATAGGTGTA
TACATGATGTAACACTTTGGTTGGCATTGTACGTTTGCACTGATTTCTGG
AGCGGGTGCTGATCCGTAGGGGAAAAGAAGAAAATAAAATAGATGTGATG
AGAAAACGTCTATTTCGGTGCCCCGTATGATTATCCCGTGCAAGTTCCCG
TGAGATTCCTACGGGACGCCCGTTTATTTCGGACGGTACAGCATGGGACT
CTCCCGTTCCGTCCCGTGACTTTTGTTTCGGCGGGCTGCCCGTCCCGACC
CGTCCCGTGACAATTTTCTGGACGACCTGCTCGTCCCGCCCATCCCGTGA
CGTTTTTAGAGAAAAAGTTCCCGTTTTGTGGGCCCGTACAATGCCCTTGC
CTGGGGTACTTGCCTGACATCATTTTCCTTTCTTGTGTTTGCCGTTTCTT
CGCAGCGATTGCGTAATGCATGCCTACGGTTGTGACTCAGTGCTGGAAGA
CAACTGCATCCTGATACAGGGGAGATCTGTCGATAGTTGGGAGGGCGTCG
AAATCCCTCAAGTTAAAGGCTGGAGACATGCGCGTATGGACATTCGTGCA
TTCAGGGCGAAGTTTGAAGTGCTTTCGCCGACGTCAGCCTGCACATCGAT
TGTGACGAACGTAGACCTCAAAGTGCCTTTGCCACGAACAGTGGTAAATT
TCTTGGTGAGTAGCGCAACATGCATCTCATACAGATATGTACGTGATAGA
TATTTTTCGGTTGCTGTCTTTGATGCTGACCACAGCGCCTCGGTGGTTGA
GCTGGTGACACCAGCGTCCCGGTTGACGGAAGTTCGGTGATTCTAATCCT
GGTAAAAGTCACGCGTATCTGTTGTCGTCTTCCGTCACGAAAAGCTTGAG
CTCGTGAGGAAGAAAATTATTCCAATGAGGTATGACTTGGATGAACCCTG
CAGACCACGGGCCGCCAAGAAAGCTGCAGTGCTGAAATATCGATAGTTGA
TGGTTTGTATCCCAGGTTCTTGACAATGCCTTGCTCCGTCGCGGTGTTGC
CCTCCAGCTCCGCAAGGTCGCAGGGATGTTTCTCTACTGCCTCAAGCAAG
CTGCACGACGCATCACAACAGACGATAACAACCATCACCGCCTCAGAATT
TTGGAGGACGAGGAGTTTTACAAGCACTGGCTATACCCACGTTTCCAGCA
GTTCTACAGCTCGAGAGGCTGGAGCTTCGATGGCGGGTTTCCAGCGGCGG
AAGGGACGTCGTCCAGGCGAGCGGCAGAGCAAAGTTGCGGACGGAGTTGT
AAGTCGGTCAAGACGAACCTTGAGTCTCGTCGATTCTGCGGGCGTTTCCG
ACTTCAGGCTGCCCAAGGAACCAAACGATCCTTCCGGTATTTTAGGAAAA
CACGGCAACAGGGCAACAGTGGGAATATCAGCACTCCACAGCCACAGGTA
AATGCAGTGTCGGGCTCAACTATTTGCTGCAACGGTAGGTAGGTACGTAG
GTAGGTGGGTGTATTTCTCGCTTGTGGTCCAAGTTCTGGCTCACAATGTG
GACGTCGTTGAGCGCATCCATCAATGTACAGTCCCCGATCTTTAATTCAT
GCATGCGTAGGTGGAGACGCTGGGCATCGATCCGCGGCTGCTAGAGAGGT
GGCAAGCAAGGAGAGAGACAAGACTGAGAGACGGAGGGAAGTCTAGGGCA
TCCTCCGCGCGACTTGTAGTTTATACCCTTGCTGCCATGTTTGCTGCCTT
CATGCGTTGGCTGTGTGTCTCGGACGCAAGGGAAGCATATCATGCTCGAG
CTTATGTAACCGTTGTGGTTTTAGCAGCCATCTTGCTTGCGAATTTGTTA
CCGGTTGATTTTCCAGGGTCATAGTTCGCTCCTGTGAGTTATCGTAACGT
GTTTATGCGGCACCTCGATGAACATAGAGCCGTGCGCGGTGGTCCAACTT
TTGCTGGATTAACCGCTGTTAGCCCTCCGGAATATTTTTAGCAGTTGTCA
AGAACTGCATGTCAACTTTTATGTAGATAGTTTGGCTACCGCTATTATAG
GTGTATTATGTGGACCTATCGTTTTTGCCGTCCCACGAAATGTTCGTTGG
GGTGGTTCCTCGGCCTCACGAGGACGTTACCGTTATTTTTTCATTGGTGA
TGTAGGGTGACACTGATGGGTGGAACCTTGCGTGGCCCATACTCCTTGGT
TAATGTGATATCCTAGCCTGTTGTTGTCTGCCATGGTCGAGGTCTTCTCG
AGTCGTATCCACACTCTTATTGGTAGGGTTGTGAATTGATATCGATGCAT
GCGATACATCGGGTCCGATATAATCGATATCGGAATCGGAAAGTCGTTCC
GATTTTCTACGGGTATCTGGCCCTTTTATGAGTAACGTCTTCTACCGGCT
ATAAACGAGTG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9451:4628..8838-

>mRNA_D-dudresnayi_contig9451.28255.1 ID=mRNA_D-dudresnayi_contig9451.28255.1|Name=mRNA_D-dudresnayi_contig9451.28255.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2256bp|location=Sequence derived from alignment at D-dudresnayi_contig9451:4628..8838- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGGCATAACGACCTGCTACAAACATGATTCTGACGGGAGCCTGTGGGT
AAAGTTGCATGGTACCATGGAAGGAGTCCGAGTGATGGACCAATTAGCCA
CCGTTCGAGAAGTCGATTTGTTCAAAACGTGGGTCCCCTTCTGCGACAAG
TCTACGCTGCTCAAGCGCCTAGGTATCGTGGAACTGCTGGTACACTTCAA
CACTACAGTGCCGGGATGCAGTCGATGGGCATAACGACCTGCTACAAACA
TGATTCTGACGGGAGCCTGTGGGTAAAGTTGCATGGTACCATGGAAGGAG
TCCGAGTGATGGACCAATTAGCCACCGTTCGAGAAGTCGATTTGTTCAAA
ACGTGGGTCCCCTTCTGCGACAAGTCTACGCTGCTCAAGCGCCTAGGTAT
CGTGGAACTGCTGGTACACTTCAACACTACAGTGCCGGGATGCAGTCGCG
ATTGCGTAATGCATGCCTACGGTTGTGACTCAGTGCTGGAAGACAACTGC
ATCCTGATACAGGGGAGATCTGTCGATAGTTGGGAGGGCGTCGAAATCCC
TCAAGTTAAAGGCTGGAGACATGCGCGTATGGACATTCGTGCATTCAGGG
CGAAGTTTGAAGTGCTTTCGCCGACGTCAGCCTGCACATCGATTGTGACG
AACGTAGACCTCAAAGTGCCTTTGCCACGAACAGTGGTAAATTTCTTGCG
ATTGCGTAATGCATGCCTACGGTTGTGACTCAGTGCTGGAAGACAACTGC
ATCCTGATACAGGGGAGATCTGTCGATAGTTGGGAGGGCGTCGAAATCCC
TCAAGTTAAAGGCTGGAGACATGCGCGTATGGACATTCGTGCATTCAGGG
CGAAGTTTGAAGTGCTTTCGCCGACGTCAGCCTGCACATCGATTGTGACG
AACGTAGACCTCAAAGTGCCTTTGCCACGAACAGTGGTAAATTTCTTGCT
CCGCAAGGTCGCAGGGATGTTTCTCTACTGCCTCAAGCAAGCTGCACGAC
GCATCACAACAGACGATAACAACCATCACCGCCTCAGAATTTTGGAGGAC
GAGGAGTTTTACAAGCACTGGCTATACCCACGTTTCCAGCAGTTCTACAG
CTCGAGAGGCTGGAGCTTCGATGGCGGGTTTCCAGCGGCGGAAGGGACGT
CGTCCAGGCGAGCGGCAGAGCAAAGTTGCGGACGGAGTTGTAAGTCGGTC
AAGACGAACCTTGAGTCTCGTCGATTCTGCGGGCGTTTCCGACTTCAGGC
TGCCCAAGGAACCAAACGATCCTTCCGGTATTTTAGGAAAACACGGCAAC
AGGGCAACAGTGGGAATATCAGCACTCCACAGCCACAGCTCCGCAAGGTC
GCAGGGATGTTTCTCTACTGCCTCAAGCAAGCTGCACGACGCATCACAAC
AGACGATAACAACCATCACCGCCTCAGAATTTTGGAGGACGAGGAGTTTT
ACAAGCACTGGCTATACCCACGTTTCCAGCAGTTCTACAGCTCGAGAGGC
TGGAGCTTCGATGGCGGGTTTCCAGCGGCGGAAGGGACGTCGTCCAGGCG
AGCGGCAGAGCAAAGTTGCGGACGGAGTTGTAAGTCGGTCAAGACGAACC
TTGAGTCTCGTCGATTCTGCGGGCGTTTCCGACTTCAGGCTGCCCAAGGA
ACCAAACGATCCTTCCGGTATTTTAGGAAAACACGGCAACAGGGCAACAG
TGGGAATATCAGCACTCCACAGCCACAGGTGGAGACGCTGGGCATCGATC
CGCGGCTGCTAGAGAGGTGGCAAGCAAGGAGAGAGACAAGACTGAGAGAC
GGAGGGAAGTCTAGGGCATCCTCCGCGCGACTTGTAGTTTATACCCTTGC
TGCCATGTTTGCTGCCTTCATGCGTTGGCTGTGTGTCTCGGACGCAAGGG
AAGCATATCATGCTCGAGCTTATGTAACCGTTGTGGTTTTAGCAGCCATC
TTGCTTGCGAATTTGTTACCGGTTGATTTTCCAGGGTCATAGGTGGAGAC
GCTGGGCATCGATCCGCGGCTGCTAGAGAGGTGGCAAGCAAGGAGAGAGA
CAAGACTGAGAGACGGAGGGAAGTCTAGGGCATCCTCCGCGCGACTTGTA
GTTTATACCCTTGCTGCCATGTTTGCTGCCTTCATGCGTTGGCTGTGTGT
CTCGGACGCAAGGGAAGCATATCATGCTCGAGCTTATGTAACCGTTGTGG
TTTTAGCAGCCATCTTGCTTGCGAATTTGTTACCGGTTGATTTTCCAGGG
TCATAG
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