mRNA_D-dudresnayi_contig9368.28159.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9368.28159.1
Unique NamemRNA_D-dudresnayi_contig9368.28159.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
[Close]
BLAST of mRNA_D-dudresnayi_contig9368.28159.1 vs. uniprot
Match: D7FXC7_ECTSI (Similar to WD repeat domain 36 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXC7_ECTSI)

HSP 1 Score: 722 bits (1863), Expect = 1.090e-250
Identity = 355/393 (90.33%), Postives = 373/393 (94.91%), Query Frame = 1 
Query:    1 ADSTALCVLSAGTDRSFRVFHTVRDCLSQELSQKPLVKVATRHRVTTQDDFKLRPVLSFAASETRSRDWCNIITCHEEDSNAYVWSYARRAIGTHVLRQKHWPGNAMMHPPDPSTFATSVAISGCGDYGLVGTRGGHIFRYNMQSGQARGSYPQSATPSPKAVKALKNVMKPGSIAKITSDGFSSKRIAAAEAAAAGTKGGARRG-WKGHAGAVSGIGVDAVNKTMVSAGVDGLLVFWSFNEKRADGAVVVGSGVSQLELVRDTDLVALACDDKVVRLYDLATRKLVRRLAGHTNHLTDMCFTPDARRLITASMDHTVRIWDLPTGRMVDWMWHKKAVTGVTVSPTGEFMCTSHHGRVGLNVWADQSFFQPVYLDKVPATPFKMDEPAPLIED 1176
            AD+TALCVLSAGTDRSFRVFHTVRDCLSQELSQKPLVKVATRHRVTTQDDFKLRPVL FAASETR+RDWCNIITCHEEDSNAYVWSYA+RA+GTHVLRQKHWPGNAMMHPPDP+TFATSVAISGCG+YGLVGTRGGH+FRYNMQSGQ RGSYPQSATPS KAVKAL NVMKPGSIAKITSDGFSSKRIAA EAAAA  + GA+ G W+GH GAVSG+GVDAVNKTMVSAGVDGLLVFW+F EKRADGAV VGSGVSQLELVRDT+LVALACDD VVRLYDLATRKLVRRL GHTNHLTDMCFTPDARRL+T+SMDHTVRIWDLPTGR VDWM  KKAVTGVTVSPTGEFMCTSHHGRVGL+VWADQSFFQPVYLDK+P  PFKMDEPAPL+ED
Sbjct:  369 ADATALCVLSAGTDRSFRVFHTVRDCLSQELSQKPLVKVATRHRVTTQDDFKLRPVLCFAASETRARDWCNIITCHEEDSNAYVWSYAKRAVGTHVLRQKHWPGNAMMHPPDPNTFATSVAISGCGNYGLVGTRGGHVFRYNMQSGQPRGSYPQSATPSAKAVKALTNVMKPGSIAKITSDGFSSKRIAATEAAAAKVRAGAKAGSWRGHRGAVSGVGVDAVNKTMVSAGVDGLLVFWAFKEKRADGAVAVGSGVSQLELVRDTELVALACDDMVVRLYDLATRKLVRRLEGHTNHLTDMCFTPDARRLVTSSMDHTVRIWDLPTGRTVDWMSFKKAVTGVTVSPTGEFMCTSHHGRVGLSVWADQSFFQPVYLDKIPTVPFKMDEPAPLVED 761
[Close]
BLAST of mRNA_D-dudresnayi_contig9368.28159.1 vs. uniprot
Match: A0A6H5JTQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTQ6_9PHAE)

HSP 1 Score: 379 bits (972), Expect = 2.120e-122
Identity = 201/251 (80.08%), Postives = 216/251 (86.06%), Query Frame = 1 
Query:  427 MQSGQARGSYPQSATPSPKAVKALKNVMKPGSIAKITSDGFSSKRIAAAEAAAAGTKGGARRG-WKGHAGAVSGIGVDAVNKTMVSAGVDGLLVFWSFNEKRADGAVVVGSGVSQLELVRDTDLVALACDDKVVRLYDLATRKLVRRLAGHTNHLTDMCFTPDARRLITASMDHTVRIWDLPTGRMVDWMWHKKAVTGVTVSPTGEFMCTSHHGRVGLNVWADQSFFQPVYLDKVPATPFKMDEPAPLIED 1176
            MQSGQ RGSYPQSATPS KAVKAL NV+KPGSIAKITSDGFSSKRIAA EAAAA  K GA+ G W+GH GAVSG+GVD VNKTMVSAGVDGLLVFW+F EKRADGAV VGSGVSQLELVRDT+LVALACDD VVRLYDLATRKLVRRL GHTNHLTDMCFTPDARRL+T+SMDHT       +   +D    ++    VTVSPTGEFMCTSHHGRVGL+VWADQSFFQPVYLDK+P  PFKMDEPAPL+ED
Sbjct:    1 MQSGQPRGSYPQSATPSAKAVKALTNVVKPGSIAKITSDGFSSKRIAATEAAAAKVKAGAKAGSWRGHRGAVSGVGVDTVNKTMVSAGVDGLLVFWAFKEKRADGAVAVGSGVSQLELVRDTELVALACDDMVVRLYDLATRKLVRRLEGHTNHLTDMCFTPDARRLVTSSMDHTNMGSPHRSNGGLDVF--QEGRHRVTVSPTGEFMCTSHHGRVGLSVWADQSFFQPVYLDKIPTVPFKMDEPAPLVED 249
[Close]
BLAST of mRNA_D-dudresnayi_contig9368.28159.1 vs. uniprot
Match: A0A4D9CWM3_9STRA (Utp21 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWM3_9STRA)

HSP 1 Score: 375 bits (963), Expect = 4.280e-117
Identity = 199/401 (49.63%), Postives = 273/401 (68.08%), Query Frame = 1 
Query:   22 VLSAGTDRSFRVFHTVRDCLSQELSQKPLVKVATRHRVTTQDDFKLRPVLSFAASETRSRDWCNIITCHEEDSNAYVWSYARRAIGTHVLRQKHWPG-NAMMHPPDPSTFATSVAISGCGDYGLVGTRGGHIFRYNMQSGQARGSYPQS----ATPSPKAVKALKNVMKPGSI----AKITSDGFSSKRIAAAEAAAAGTKGGARRGW------KGHAGAVSGIGVDAVNKTMVSAGVDGLLVFWSFNEKRADGAVVVGSGVSQLELVRDTDLVALACDDKVVRLYDLATRKLVRRLAGHTNHLTDMCFTPDARRLITASMDHTVRIWDLPTGRMVDWMWHKKAVTGVTVSPTGEFMCTSHHGRVGLNVWADQSFFQPVYL--DKVPATPFKMDEPAPLIE 1173
            +LSAG+DR+FRVFHT RD  S+E+SQ PL+K A +  V   ++ KL P+L+FAASETR+RDWCN+ITCHE DSNAYVW +  RA+G  VLRQ  W G N M  P +    A  V I+ CG++G+VGTRGG ++ YNMQSG+ARGS+P++    +TP   +++  +   +PGS+      +   G  ++     E  AAG    A  G       +GH G V+G+ VD +N+ +VS+G+DG+L+FW F        + +  G++QLE+ R+++L+A ACDD VVR+YD+ TRKLVRRLAGHT  ++DMCF+ D RRL++AS+D TVR+WDLPTG  VDW+  K+ VTG+T+S TGE++CTSH  R+GL +WAD+SFFQ V L     P TP  +DEP  L E
Sbjct:  392 ILSAGSDRAFRVFHTARDAQSREMSQGPLLKKAKQLHVRP-EELKLAPILAFAASETRARDWCNVITCHEGDSNAYVWKFDNRALGKAVLRQPDWAGDNVMSSPENLERQALCVGITACGNFGVVGTRGGVVYLYNMQSGEARGSFPRTRAAKSTPHD-SMRLARGQARPGSVWAAHKSVMDKGVVARNSQTHEKGAAGKGCPAGTGLPTHFFHQGHGGPVTGVQVDCLNRVLVSSGLDGMLLFWDFKTHALLAVLKLDVGIAQLEIARESELLAAACDDFVVRVYDMMTRKLVRRLAGHTAQISDMCFSRDGRRLVSASVDATVRVWDLPTGACVDWLRFKRPVTGLTLSHTGEYLCTSHVDRLGLYMWADRSFFQTVDLCSSGPPTTPCDLDEPTVLTE 790
[Close]
BLAST of mRNA_D-dudresnayi_contig9368.28159.1 vs. uniprot
Match: A0A662WI09_9STRA (Utp21 domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WI09_9STRA)

HSP 1 Score: 367 bits (943), Expect = 6.670e-117
Identity = 196/395 (49.62%), Postives = 264/395 (66.84%), Query Frame = 1 
Query:    1 ADSTALCVLSAGTDRSFRVFHTVRDCLSQELSQKPLVKVATRHRVTTQDDFKLRPVLSFAASETRSRDWCNIITCHEEDSNAYVWSYARRAIGTHVLRQ----KHWPGNAMMHPPDPSTFATSVAISGCGDYGLVGTRGGHIFRYNMQSGQARGSYPQSATPSPKAVKALKNVMKPGSIAKITSDGFSSKRIAAAEAAAAGTKGGARRGWKGHAGAVSGIGVDAVNKTMVSAGVDGLLVFWSFNEKRADGAVVVGSGVSQLELVRDTDLVALACDDKVVRLYDLATRKLVRRLAGHTNHLTDMCFTPDARRLITASMDHTVRIWDLPTGRMVDWMWHKKAVTGVTVSPTGEFMCTSHHGRVGLNVWADQSFFQPVYLDKVPATPFKMDEPAPLIE 1173
            AD T   +LSAG DR+FRVFHT R+  S ELSQ P++K A R  V   +D KL P++ FAA ETR+RDW N++TCHE +  AYVW + RRAIG  VLRQ       P  +        T ATSVAIS CG+Y LVG+ GG +FRYNMQSG++RGS+P SATP PK +++L  V+   ++ ++  D      I+ A+A               HAG VS + VDA+N T+VSAG+DG L FW F  +     V +GS VSQ+EL RD++L+ +ACDD+V+RL+D+ TRKLVRR AGH + +TDM F+ DAR L +++ D ++R+WD+PTG+ VDW+  +K VTG+ VSPTGEF+ T+H G VG+ +WA+++FF  V+LD  P+ P  MD P PL E
Sbjct:  129 ADGTCCQILSAGQDRAFRVFHTAREQQSTELSQGPVLKKARRLHVRV-EDLKLPPIVQFAAMETRARDWANVVTCHENELAAYVWRFERRAIGKKVLRQFDPSNRVPSGSAEDLRRKKTQATSVAISSCGNYALVGSLGGAVFRYNMQSGESRGSFPASATPKPKLIQSL--VLPGTNMEELQVD---DAEISLADA---------------HAGPVSAVVVDAMNTTLVSAGIDGKLKFWDFKSQELHFEVDIGSPVSQMELHRDSNLLCVACDDQVLRLFDVTTRKLVRRFAGHAHRVTDMTFSADARWLFSSAADASLRVWDIPTGKCVDWLRFQKPVTGLAVSPTGEFLATTHVGHVGIFLWANRTFFMDVFLDSEPSEPVVMDMPVPLNE 502
[Close]
BLAST of mRNA_D-dudresnayi_contig9368.28159.1 vs. uniprot
Match: H3GU36_PHYRM (Utp21 domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=H3GU36_PHYRM)

HSP 1 Score: 369 bits (946), Expect = 2.710e-115
Identity = 200/395 (50.63%), Postives = 259/395 (65.57%), Query Frame = 1 
Query:    1 ADSTALCVLSAGTDRSFRVFHTVRDCLSQELSQKPLVKVATRHRVTTQDDFKLRPVLSFAASETRSRDWCNIITCHEEDSNAYVWSYARRAIGTHVLRQ----KHWPGNAMMHPPDPSTFATSVAISGCGDYGLVGTRGGHIFRYNMQSGQARGSYPQSATPSPKAVKALKNVMKPGSIAKITSDGFSSKRIAAAEAAAAGTKGGARRGWKGHAGAVSGIGVDAVNKTMVSAGVDGLLVFWSFNEKRADGAVVVGSGVSQLELVRDTDLVALACDDKVVRLYDLATRKLVRRLAGHTNHLTDMCFTPDARRLITASMDHTVRIWDLPTGRMVDWMWHKKAVTGVTVSPTGEFMCTSHHGRVGLNVWADQSFFQPVYLDKVPATPFKMDEPAPLIE 1173
            AD T   +LSAG DR+FRVFHT R+  S ELSQ P++K A R  V   +D KL P++ FAA ETRSRDW N+ITCHE +  AYVW +  RAIG  VLRQ       P  ++       T ATSVAIS CG+Y LVG+ GG IFRYNMQSG+ARGS+P +ATP  K +++L   + PG+      D  S K  A A                 H G VS + VDAVN+T+VSAG+DG L FW F +      V +GS VSQ+EL RD++L+ +ACDD+V+RL+D+ TRKLVRR AGH++ +TDM F+ DAR L ++S D ++R+WD+PTG+ VDW+  +K VTG+ VSPTGEF+ T+H G VG+ +WA++SFF  V+LD  P  P  MD P  L E
Sbjct:  349 ADGTCCQILSAGQDRAFRVFHTAREQQSTELSQGPVLKKARRLNVRV-EDLKLPPIVQFAAMETRSRDWANVITCHENEIAAYVWRFEHRAIGKKVLRQFDPSNRVPSGSVEDLRRKKTQATSVAISSCGNYALVGSLGGSIFRYNMQSGEARGSFPVAATPKAKIIRSL---VLPGTDLSSLQDDESEKTAADA-----------------HDGPVSAVAVDAVNETLVSAGIDGKLKFWGFKKHELRFEVDIGSPVSQMELHRDSNLLCVACDDQVLRLFDVVTRKLVRRFAGHSHRVTDMTFSSDARWLFSSSADASLRVWDIPTGKCVDWLRFQKPVTGLAVSPTGEFLATTHVGHVGIFLWANRSFFTDVFLDSEPTEPVLMDMPVALNE 722
[Close]
BLAST of mRNA_D-dudresnayi_contig9368.28159.1 vs. uniprot
Match: A0A835YID8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YID8_9STRA)

HSP 1 Score: 375 bits (963), Expect = 2.880e-115
Identity = 208/429 (48.48%), Postives = 259/429 (60.37%), Query Frame = 1 
Query:   13 ALCVLSAGTDRSFRVFHTVRDCLSQELSQKPLVKVATRHRVTTQDDFKLRPVLSFAASETRSRDWCNIITCHEEDSNAYVWSYARRAIGTHVLRQKHWPGNAMMHPPDPSTFATSVAISGCGDYGLVG----------------TRGGHIFRYNMQSGQARGSYPQSATPSPKAVKALKNVMKPGSIAKITSDGFSSKRIAAAEAAAAGTKGGARRGWKG---HAGAVS----------------------GIGVDAVNKTMVSAGVDGLLVFWSFNEKRADGAVVVGSGVSQLELVRDTDLVALACDDKVVRLYDLATRKLVRRLAGHTNHLTDMCFTPDARRLITASMDHTVRIWDLPTGRMVDWMWHKKAVTGVTVSPTGEFMCTSHHGRVGLNVWADQSFFQPVYLDKVPATPFKMDEPAPLIED 1176
            ALC+LSAG D +FR FH +RD LS E SQK L+    +HR+  ++  +L PV++F A ETR+RDW NI TCHEED+NAYVWSY  RA G  +LRQKHWPGNAM  PP+PS FA+SVAIS CG++ LVG                TRGG IF+YNMQSG  RGS+PQSAT +P+A  +     +PGS+A+I  D  + K +  A AA AG +  A    +    H GAV                       G+  DA N  + S G+DG ++FW F   +A   +  G+GVSQLELVRD+ L+A ACDD VVR+YD ATRKLVRRL GH   + DM FT                       + VDW+   K VT +T SPTGEF+CTSH  R+GL+VWAD+SFFQPVYLD  P  P  MD+P P +ED
Sbjct:  479 ALCLLSAGGDGAFRRFHAMRDALSVEFSQKQLMSTTMQHRIAHRNKGRLGPVIAFDACETRARDWHNICTCHEEDANAYVWSYKDRAAGKMILRQKHWPGNAMKTPPNPSHFASSVAISACGNFALVGIPSLTTXXXXXXXXXXTRGGPIFKYNMQSGLERGSFPQSATQAPRAATSG-GKPRPGSVARI--DATNKKALTKAGAAMAGDEDAAALNDEADVRHTGAVQRLTXXXXXXXXXXXXXXXXXXXGLATDAFNAAVASGGLDGKVIFWDFQTHQALAEIATGAGVSQLELVRDSGLLAAACDDSVVRIYDFATRKLVRRLPGHGGPIVDMVFTAXXXXXXXXXXXXXXXXXXXXXXKCVDWLKFAKPVTSLTTSPTGEFLCTSHQDRLGLSVWADRSFFQPVYLDSTPTAPILMDQPPPAVED 904
[Close]
BLAST of mRNA_D-dudresnayi_contig9368.28159.1 vs. uniprot
Match: A0A2P4XFW9_9STRA (Utp21 domain-containing protein n=31 Tax=Phytophthora TaxID=4783 RepID=A0A2P4XFW9_9STRA)

HSP 1 Score: 359 bits (922), Expect = 5.820e-112
Identity = 193/395 (48.86%), Postives = 256/395 (64.81%), Query Frame = 1 
Query:    1 ADSTALCVLSAGTDRSFRVFHTVRDCLSQELSQKPLVKVATRHRVTTQDDFKLRPVLSFAASETRSRDWCNIITCHEEDSNAYVWSYARRAIGTHVLRQ----KHWPGNAMMHPPDPSTFATSVAISGCGDYGLVGTRGGHIFRYNMQSGQARGSYPQSATPSPKAVKALKNVMKPGSIAKITSDGFSSKRIAAAEAAAAGTKGGARRGWKGHAGAVSGIGVDAVNKTMVSAGVDGLLVFWSFNEKRADGAVVVGSGVSQLELVRDTDLVALACDDKVVRLYDLATRKLVRRLAGHTNHLTDMCFTPDARRLITASMDHTVRIWDLPTGRMVDWMWHKKAVTGVTVSPTGEFMCTSHHGRVGLNVWADQSFFQPVYLDKVPATPFKMDEPAPLIE 1173
            AD T   +LSAG DR+FRVFHT R+  S+E+SQ P++K A    V   +D KL P++ FA+ ETR+RDW N+ITCHE +  AYVW +  RAIG  VLRQ       P  +        T ATSVAIS CG+Y LVG+ GG I+RYNMQSG+ RGS+P +ATP  K +++L   + PG+      D  S K  A A                 H G VS + VDA+N+T+VSAG+DG L FW F +      + VGS +SQ+EL RD++L+ +ACDD+V+RLYD+ T KLVRR AGH++ +TDM F+ DAR L ++S D ++R+WD+PTG+ VDWM  +K VTG+ VSPTGEF+ T+H G VG+ +WA++SFF  V+LD  P  P  MD P  L E
Sbjct:  327 ADGTCCQILSAGQDRAFRVFHTAREQQSREMSQGPVLKKARSLNVRI-EDLKLPPIVQFASMETRARDWANVITCHENEIAAYVWRFEHRAIGKKVLRQFDPSNRVPSGSAEDLRRKKTQATSVAISSCGNYALVGSLGGSIYRYNMQSGEKRGSFPVAATPKAKIIRSL---VLPGTDLSALQDDESDKTAADA-----------------HNGPVSAVAVDALNETLVSAGIDGKLKFWGFKKHELRYEIDVGSPISQMELHRDSNLLCVACDDQVLRLYDVTTHKLVRRFAGHSHRVTDMTFSSDARWLFSSSADASLRVWDIPTGKCVDWMRFQKPVTGLAVSPTGEFLATTHVGHVGIFLWANRSFFTEVFLDSEPTEPVLMDMPVALNE 700
[Close]
BLAST of mRNA_D-dudresnayi_contig9368.28159.1 vs. uniprot
Match: G5A0L8_PHYSP (Hydroxymethylbilane synthase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A0L8_PHYSP)

HSP 1 Score: 364 bits (934), Expect = 6.690e-111
Identity = 197/395 (49.87%), Postives = 255/395 (64.56%), Query Frame = 1 
Query:    1 ADSTALCVLSAGTDRSFRVFHTVRDCLSQELSQKPLVKVATRHRVTTQDDFKLRPVLSFAASETRSRDWCNIITCHEEDSNAYVWSYARRAIGTHVLRQ----KHWPGNAMMHPPDPSTFATSVAISGCGDYGLVGTRGGHIFRYNMQSGQARGSYPQSATPSPKAVKALKNVMKPGSIAKITSDGFSSKRIAAAEAAAAGTKGGARRGWKGHAGAVSGIGVDAVNKTMVSAGVDGLLVFWSFNEKRADGAVVVGSGVSQLELVRDTDLVALACDDKVVRLYDLATRKLVRRLAGHTNHLTDMCFTPDARRLITASMDHTVRIWDLPTGRMVDWMWHKKAVTGVTVSPTGEFMCTSHHGRVGLNVWADQSFFQPVYLDKVPATPFKMDEPAPLIE 1173
            AD T   +LSAG DR+FRVFHT R+  S+ELSQ P++K A R  V   +D KL P+  FAA ETR RDW N+ITCHE +  AYVW +  RAIG  VLRQ    K  P  +        T ATSVAIS CG+Y LVG+ GG IFRYNMQSG+ARGS+P SATP  K +++L   + PG+      D    K    A                 H G VS + VDA+N+T+VSAG+DG L FW F +      + +GS +SQ+EL RD++L+ +ACDD+V+RLYD+ T KLVRR AGH++ +TDM F+ DAR L ++S D ++R+WD+PTG+ VDW+   K VTG+ VSPTGEF+ T+H G VG+ +WA++SFF  V+LD  PA P  MD P  L E
Sbjct:  779 ADGTCCQILSAGQDRAFRVFHTAREQQSRELSQGPVLKKARRLNVRV-EDLKLPPIAQFAAMETRERDWANVITCHENEIAAYVWRFENRAIGKKVLRQFDPSKRVPSGSAEDLRRKKTQATSVAISSCGNYALVGSLGGCIFRYNMQSGEARGSFPVSATPKAKIIRSL---VLPGTDMSALQDNDVEKTAGDA-----------------HDGPVSAVAVDALNETLVSAGIDGKLKFWGFKKHELRYEIDIGSPISQMELHRDSNLLCVACDDQVLRLYDVTTHKLVRRFAGHSHRVTDMTFSSDARWLFSSSADASLRVWDIPTGKCVDWLRFHKPVTGLAVSPTGEFLATTHVGHVGIFLWANRSFFTEVFLDSEPAEPVLMDMPVSLNE 1152
[Close]
BLAST of mRNA_D-dudresnayi_contig9368.28159.1 vs. uniprot
Match: A0A484EHC5_BRELC (Utp21 domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EHC5_BRELC)

HSP 1 Score: 355 bits (911), Expect = 3.200e-110
Identity = 192/395 (48.61%), Postives = 252/395 (63.80%), Query Frame = 1 
Query:    1 ADSTALCVLSAGTDRSFRVFHTVRDCLSQELSQKPLVKVATRHRVTTQDDFKLRPVLSFAASETRSRDWCNIITCHEEDSNAYVWSYARRAIGTHVLRQ----KHWPGNAMMHPPDPSTFATSVAISGCGDYGLVGTRGGHIFRYNMQSGQARGSYPQSATPSPKAVKALKNVMKPGSIAKITSDGFSSKRIAAAEAAAAGTKGGARRGWKGHAGAVSGIGVDAVNKTMVSAGVDGLLVFWSFNEKRADGAVVVGSGVSQLELVRDTDLVALACDDKVVRLYDLATRKLVRRLAGHTNHLTDMCFTPDARRLITASMDHTVRIWDLPTGRMVDWMWHKKAVTGVTVSPTGEFMCTSHHGRVGLNVWADQSFFQPVYLDKVPATPFKMDEPAPLIE 1173
            AD T   +LSAG DR+FRVFHT R+  S+E+SQ P++K A RH     +  KL P++ FAA ETR+RDW N++TCHE    AYVW +  RAIG  VL+Q     H    ++       T ATSVAIS CG+Y LVG+ GG IFRYNMQSG+ RGSYP +ATP    +++L   + PG+      D  + K    A                 H G VS + VDA+N T+VSAG+DG+L FW F +      + VGS +SQ+EL RD++L+ +ACDD+V+RLYD+AT KLVRR AGH++ +TDM F+ DAR L ++S D ++RIWDLPTG+ VDWM   K VTG+ VSPTGEF+ T+H   VG+ +WA++SFF  V+ D  P  P  MD P  L E
Sbjct:  349 ADGTCCQILSAGQDRAFRVFHTAREQQSREMSQGPVLKKA-RHFNVRVETLKLPPIVQFAAIETRARDWANVVTCHENKVGAYVWRFEHRAIGKKVLQQYDPRNHVVSGSVEDLRRKKTQATSVAISSCGNYALVGSLGGSIFRYNMQSGETRGSYPVAATPKAPIIQSL---VLPGTDLSTLQDDEAEKTAVNA-----------------HTGPVSAVAVDALNTTLVSAGIDGVLKFWGFQKHELRDEIDVGSPISQMELHRDSNLLGVACDDQVLRLYDVATHKLVRRFAGHSHRVTDMTFSSDARWLFSSSADASLRIWDLPTGKCVDWMRFHKPVTGLAVSPTGEFLATTHVAHVGIFLWANRSFFTDVFFDAEPMAPILMDLPVSLNE 722
[Close]
BLAST of mRNA_D-dudresnayi_contig9368.28159.1 vs. uniprot
Match: M4BPC8_HYAAE (Utp21 domain-containing protein n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BPC8_HYAAE)

HSP 1 Score: 356 bits (913), Expect = 4.860e-110
Identity = 189/395 (47.85%), Postives = 255/395 (64.56%), Query Frame = 1 
Query:    1 ADSTALCVLSAGTDRSFRVFHTVRDCLSQELSQKPLVKVATRHRVTTQDDFKLRPVLSFAASETRSRDWCNIITCHEEDSNAYVWSYARRAIGTHVLRQ----KHWPGNAMMHPPDPSTFATSVAISGCGDYGLVGTRGGHIFRYNMQSGQARGSYPQSATPSPKAVKALKNVMKPGSIAKITSDGFSSKRIAAAEAAAAGTKGGARRGWKGHAGAVSGIGVDAVNKTMVSAGVDGLLVFWSFNEKRADGAVVVGSGVSQLELVRDTDLVALACDDKVVRLYDLATRKLVRRLAGHTNHLTDMCFTPDARRLITASMDHTVRIWDLPTGRMVDWMWHKKAVTGVTVSPTGEFMCTSHHGRVGLNVWADQSFFQPVYLDKVPATPFKMDEPAPLIE 1173
            AD T   +LSAG DR+FRVFHT R+  S+ELSQ P++K A    V   +D KL P++ FAA ETR+RDW N+ITCHE +  AYVW +  RAIG  VLRQ       P  ++       T ATSV IS CG+Y LVG+ GG IF+YNMQSG+ARGS+P + TP PK + +L   + PG+   +  D    K    A                 H G VS + VDA+N+T+VSAG+DG L FW   +     A+ V S +SQ+EL RD++L+ +ACDD+++RL+D+ TRKLVRR AGH++ +TDM F+ DAR L ++S D ++R+WD+PTG+ +DW+  +K VTG+ VSPTGEF+ T+H G VG+ +WA++SFF  +YLD  P  P  MD P  L E
Sbjct:  403 ADGTCCQILSAGQDRAFRVFHTAREQQSRELSQGPVLKKARSLSVRV-EDLKLPPIVQFAAMETRARDWANVITCHENEIAAYVWCFEHRAIGKKVLRQFDPSHRVPSGSVEDLRRKKTQATSVTISSCGNYALVGSLGGAIFQYNMQSGEARGSFPVAVTPKPKIISSL---VLPGTDLSVLQDDEYDKTAGDA-----------------HDGPVSAVAVDALNETLVSAGIDGKLKFWDLKKHDLRHAINVDSPISQMELHRDSNLLCVACDDQILRLFDVTTRKLVRRFAGHSHRVTDMTFSSDARWLFSSSADASLRVWDIPTGKCIDWLRFQKPVTGLAVSPTGEFLATTHVGHVGIFLWANRSFFTEIYLDSEPTEPVLMDMPVALNE 776
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9368.28159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXC7_ECTSI1.090e-25090.33Similar to WD repeat domain 36 n=1 Tax=Ectocarpus ... [more]
A0A6H5JTQ6_9PHAE2.120e-12280.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9CWM3_9STRA4.280e-11749.63Utp21 domain-containing protein n=2 Tax=Monodopsid... [more]
A0A662WI09_9STRA6.670e-11749.62Utp21 domain-containing protein (Fragment) n=1 Tax... [more]
H3GU36_PHYRM2.710e-11550.63Utp21 domain-containing protein n=6 Tax=Phytophtho... [more]
A0A835YID8_9STRA2.880e-11548.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2P4XFW9_9STRA5.820e-11248.86Utp21 domain-containing protein n=31 Tax=Phytophth... [more]
G5A0L8_PHYSP6.690e-11149.87Hydroxymethylbilane synthase n=1 Tax=Phytophthora ... [more]
A0A484EHC5_BRELC3.200e-11048.61Utp21 domain-containing protein n=1 Tax=Bremia lac... [more]
M4BPC8_HYAAE4.860e-11047.85Utp21 domain-containing protein n=2 Tax=Hyaloperon... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9368contigD-dudresnayi_contig9368:235..11353 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score724.9
Seed ortholog evalue2e-206
Seed eggNOG ortholog2880.D7FXC7
Preferred nameWDR36
KEGG koko:K14554,ko:K16353
KEGG Pathwayko03008,map03008
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030684,GO:0030686,GO:0031974,GO:0031981,GO:0032040,GO:0032991,GO:0034388,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:1901360,GO:1990904
EggNOG free text desc.rRNA processing
EggNOG OGsKOG1539@1,KOG1539@2759
Ec32 ortholog descriptionsimilar to WD repeat domain 36
Ec32 orthologEc-04_000130.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009,ko04516
Hectar predicted targeting categoryother localisation
Exons8
Model size1182
Cds size1182
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9368.28159.1prot_D-dudresnayi_contig9368.28159.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9368 235..11353 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930877.2024627-CDS-D-dudresnayi_contig9368:234..3191622930877.2024627-CDS-D-dudresnayi_contig9368:234..319Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9368 235..319 -
1690557949.5306942-CDS-D-dudresnayi_contig9368:234..3191690557949.5306942-CDS-D-dudresnayi_contig9368:234..319Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9368 235..319 -
1622930877.2285857-CDS-D-dudresnayi_contig9368:1264..14081622930877.2285857-CDS-D-dudresnayi_contig9368:1264..1408Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9368 1265..1408 -
1690557949.5414207-CDS-D-dudresnayi_contig9368:1264..14081690557949.5414207-CDS-D-dudresnayi_contig9368:1264..1408Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9368 1265..1408 -
1622930877.2544594-CDS-D-dudresnayi_contig9368:2364..25401622930877.2544594-CDS-D-dudresnayi_contig9368:2364..2540Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9368 2365..2540 -
1690557949.5495152-CDS-D-dudresnayi_contig9368:2364..25401690557949.5495152-CDS-D-dudresnayi_contig9368:2364..2540Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9368 2365..2540 -
1622930877.2755585-CDS-D-dudresnayi_contig9368:4654..48661622930877.2755585-CDS-D-dudresnayi_contig9368:4654..4866Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9368 4655..4866 -
1690557949.5576398-CDS-D-dudresnayi_contig9368:4654..48661690557949.5576398-CDS-D-dudresnayi_contig9368:4654..4866Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9368 4655..4866 -
1622930877.2935922-CDS-D-dudresnayi_contig9368:7676..78731622930877.2935922-CDS-D-dudresnayi_contig9368:7676..7873Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9368 7677..7873 -
1690557949.565822-CDS-D-dudresnayi_contig9368:7676..78731690557949.565822-CDS-D-dudresnayi_contig9368:7676..7873Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9368 7677..7873 -
1622930877.3097675-CDS-D-dudresnayi_contig9368:8557..87011622930877.3097675-CDS-D-dudresnayi_contig9368:8557..8701Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9368 8558..8701 -
1690557949.573914-CDS-D-dudresnayi_contig9368:8557..87011690557949.573914-CDS-D-dudresnayi_contig9368:8557..8701Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9368 8558..8701 -
1622930877.3283389-CDS-D-dudresnayi_contig9368:10160..102701622930877.3283389-CDS-D-dudresnayi_contig9368:10160..10270Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9368 10161..10270 -
1690557949.581932-CDS-D-dudresnayi_contig9368:10160..102701690557949.581932-CDS-D-dudresnayi_contig9368:10160..10270Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9368 10161..10270 -
1622930877.3461993-CDS-D-dudresnayi_contig9368:11239..113531622930877.3461993-CDS-D-dudresnayi_contig9368:11239..11353Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9368 11240..11353 -
1690557949.5901597-CDS-D-dudresnayi_contig9368:11239..113531690557949.5901597-CDS-D-dudresnayi_contig9368:11239..11353Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9368 11240..11353 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9368.28159.1

>prot_D-dudresnayi_contig9368.28159.1 ID=prot_D-dudresnayi_contig9368.28159.1|Name=mRNA_D-dudresnayi_contig9368.28159.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=394bp
ADSTALCVLSAGTDRSFRVFHTVRDCLSQELSQKPLVKVATRHRVTTQDD
FKLRPVLSFAASETRSRDWCNIITCHEEDSNAYVWSYARRAIGTHVLRQK
HWPGNAMMHPPDPSTFATSVAISGCGDYGLVGTRGGHIFRYNMQSGQARG
SYPQSATPSPKAVKALKNVMKPGSIAKITSDGFSSKRIAAAEAAAAGTKG
GARRGWKGHAGAVSGIGVDAVNKTMVSAGVDGLLVFWSFNEKRADGAVVV
GSGVSQLELVRDTDLVALACDDKVVRLYDLATRKLVRRLAGHTNHLTDMC
FTPDARRLITASMDHTVRIWDLPTGRMVDWMWHKKAVTGVTVSPTGEFMC
TSHHGRVGLNVWADQSFFQPVYLDKVPATPFKMDEPAPLIEDR*
back to top

mRNA from alignment at D-dudresnayi_contig9368:235..11353-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9368.28159.1 ID=mRNA_D-dudresnayi_contig9368.28159.1|Name=mRNA_D-dudresnayi_contig9368.28159.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=11119bp|location=Sequence derived from alignment at D-dudresnayi_contig9368:235..11353- (Desmarestia dudresnayi DdudBR16 monoicous)
GCAGATTCTACAGCCTTGTGCGTGCTATCGGCGGGTACGGACCGGTCATT
CCGAGTGTTCCACACCGTCAGAGATTGCCTCAGCCAGGAACTTTCTCAGA
AGCCGCTCGTCAAGGTAAGAGGTGGAGTCTTTTTTTTTCTTGGTACCGTA
CGACAGACTTGGTGCAGCGGGTGCGGAAGCTTCATGTGCATTACAGTAGT
TCGTGCCTTACACGTACTTTGATTCTTGTTGTTTTTTTATTGTGATAGGA
GGTAATGCTACACCTTGCGGTGGCGTGTATTTCTGAGAGTGAGAATATGT
TGCTTATGCTTTGTAGGTGCAAATCGTTTATGTCTACTACTAGTGCGCAC
CCGGGTGCTTCTTTGTGTGCCGCGACAAGGACTGCGTGATTGCTGAGATT
GATGTTGCTGACCTTATTGCATCTCGTACCAGGTATGATATTTATTACGA
CGAAGCGAGATTCTAGTTTCCGATGCCGCCAAAAATACAGGGCACCCTAC
ATCAGCTCGCGTGTGGTCGAATGAATATAAATGGTGGTGGACAACCAAAA
CGGCGTGAGCGTATTGATGTGTTCTGCAGCGGCGCTAGCGTTAGAAAGAA
CCGCTATGGACACGGCATATTTTTTCCGGTTGATACGTTTGATGCATCAG
ACCGGCTGTAACACACCAAACGCTTAAACATGGTAAGATGCCGTTACAAA
CGTTTGAGGAAAGCTTTACGGGGTTTCCGAGGTGCTTGTTAGGGCGTGAT
TTGTTTTTGCCGTGAGGCCGTTGGCGTGATACATCTCTGTAACCACCATG
TGCTAAGCAAGGACCCCCCTACCACGTCCAGAGGGAAAACAAGAATTGAC
CGCTGACGGTAACGACCAGTGCTTACCAAGGTTCAACTTCAACGTTGCAG
TTGAAGCGTTGTTTCTCATTCACTGTATCTCCACCCCCAAAAACGGACAA
AAATACGATTTTGCTCAATGGATCGTGGCTGAAAGTTAAGTTCTCCCGTC
ATGTAGCTTCACTAATTTTGCAAATATAATTCCACCGTCGTATGCATGGG
GTGTTTTCTATGGCATGGGCAACGGGTGACTAGGTGGCTACTCGACACCG
GGTGACAACCCAGGACGACTTCAAGTTGAGGCCTGTGCTGTCGTTTGCAG
CTAGCGAGACGAGGTCGAGGGACTGGTGCAACATCATCACATGGTGAGTG
GTAAATTTTTGCTATGTCAACGGACACCGATTGCAGCTCGTTTCAATGGA
ACGGGCACCGTCGCGCTCTATCAATTCACCTCTTATGAATATAGCTATTG
CCGCTCTTAAATGCGCCACGATTCTGTGTATCGCCCCTCTCGCTCAGTGG
ACTTTACAACGTATTCGAGGACTGGCTCTATTTACTTTTTTGCAGGACTT
TTTACGGTGTAAAACCGAACCGCGGTGCGGTTTTTTCTTTTTGCAGAATC
CTACGGTACGGTGCGGTTCGGTTAAAACCGCTAAAAACCGCACCGCACCG
TACCCGCACCATAGAAAACTACTTGATTTTAAAGGCCCCCGGTTTTTTCA
CGGTTTTATTTTGGTGAGAGTCGTACGGTGCGGTGCACCCTCGCCGTAGA
AAACTACTTGATTTTAAAGGCCCCCGATTTTTTCACGGTTTTTATTTTAG
TGAGAGTCGTACGGTGCTGTGCGGTGCGGTGCAACTTTGCACGTTGCACC
TCACCGCACTGCACCGCACCGTAAGAAAAAACCGCACCCGTAGAAAGTCC
TGGTTTTTTCTTGCTGTTACTATGGTGTGGTCATGTTTTACTTGCAAACA
GATAGAATGAGCCTTGACGTTCCAAACTGGTTTGGGGGCCAAGGGGTAAT
GGCCAACCTCCCTACTGTGTGATGCTTCTGTCGCTCGGATTATATATCGG
TCCTCAGATAAGGTACAACGTAGTGAACCGAACTGCGGTACAGCCTACGT
TGGTACTAGTATAATAAGACGAAGATCCTACAGATCTCTCGAGTAAGTCG
TAAAGTAAGCCCCTCTCGCATATCCAGCAAGCACCACGGGTCTCCCTCCC
TACGTAAGCACATTTTTTGTTTTGTTTTTTCCCCGTCCCATTTATTGTCT
TCGCTCTTCTATTCTTTCTCTAGCTCCATCTCTCTTGGTATCTCAGATCC
GTGGTCGCAGAGTAGGCGCTCCTCCCGCCTTCCCACTACGGTACGTGCCT
ATATTTTTGTCGCGAGAAGAGTGCAGCACTTTCTTCCCTCGTCGACTTTC
ATCGAATTGTGCGTACTCACGCTCTCGGGTTTTCCGCGACGGAAGATGGC
ACAGAAAAGTGCCACCGGGAATCGAACCCGAACTTCCGCCAACAGAGGCG
AACACCCTAACCATTTGACCATTGCGCCACCCCGTACATTTTTTTTTTTT
TAATTCGGAGTAAAATCAAGGTTCGCACTTACAAATTTTCACGGTTCAGC
TTTTTGAAGCTTCTCTCTTTTGCGAAAAAATCTCCCTTCTTCCCACTATT
AGTATAAAAAATCCAGACCAGTAGGCCTTGCCCGCCGAACTCGGTCCAGT
TTCGGTCCACCGTACCCGTTCGGTAGGTCCACCATCATACCCGTATTGCC
ACAACCACCTATGTACGTGCCTCTATGTTGTCCCGGTCCCATCCGACGAC
AGCCACGAGGAAGACAGCAACGCGTACGTGTGGAGCTACGCGAGGCGCGC
CATTGGAACCCACGTCTTGAGGCAGAAGCACTGGCCGGGGAACGCGATGA
TGCACCCACCTGATCCGAGCACGTTTGCCACTTCGGTGGCCATCAGGTGT
GTATGCATGTCTTGCCTTTTTTTGCGCGATATTATGTGTTTTTGCGTGAA
GGGTAAACATAGGTCAAGTTCTTGCTACACCGATCTGATGTTACCCCGAC
CAAACAGATGATCGAGCAGCCAAAAACGCCTCCATATCACTCCTGCCGTT
GTAGGGGATCGAGGGTTGGTCGATTGATTGATTAGTTGCTTGATTTTATT
GATTGATTACTTGATGACTTGATTTATTTGATTGAGTGATTGATTGATTG
ATTTGATTAGATTGGTTGACTCATATCTTGATTTGATTGAGTGATTGATT
TGATTGATTGGTTGATTTGATTGATTGGTTGATTTGATTGGTTGACTCAT
ATCTTGATTTGATTGATTGATTGATTTGATTGGTATCATACCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCG
CGCCCCCACCCCNNNNNNNNNNTTTTTGTTTTTTTGTTGTTTGGTTTTTT
TGTTTGTTTCCCTCCTTTTTTTTTTTGTTTTTTTTTTTGTTTTGTTTTGT
TTCCCCCCCCCCCCCCCCCCCCCGCCTCACCCCCGCTTCAGGACCTGACT
CTGACTATTCATGCGCACCCATCCCTCACTACTTGTGTATTTCCCATGTT
TGCGTTCTTTCCTCGTGTGCGGTGGCGTAGCGGCTGCGGAGACTACGGCC
TTGTCGGTACGAGAGGTGGTCATATATTCCGCTACAACATGCAGTCGGGG
CAGGCCAGAGGGTCGTACCCGCAGTCGGCGACCCCTTCTCCCAAGGCTGT
GAAGGCGCTCAAGAACGTCATGAAGCCGGGGTCGATCGCCAAGATCACGT
CGGACGGCTTCTCCAGCAAACGAATAGGTGGGGAAGAGCGGGACACAGGA
AAGGTGGTGCCGGTGCAAAATGTGATTTCCCGTTCCCATGCAAACAAGTA
GATGTAAAGGTTGGTTTCCTGTCCCAGCCTACAATGCTGCCGTGCAATGT
CTGTGCTTCCCGTCATTTCCCCGTACTGTTTGCTAAATGTCGCCGTGCTT
TGTGGCGGTGCATCTACTTACTCCGGAGTACTCAAGAGTGTGGAGGCGTT
TTGCTTCGGCAGAATATTTAGGGAGGTATTAAAAACCTATTGTTTATAGT
GTGGTCGTTAAAACCTATTGTTTATAGTGTGGTCGTTAAAAAAACTATTG
TTTATAGTGTGGTCGTTAAAAAAACTATTGTTTATAGTGTGGTCGTTAAA
TAACTATTGCTTATAGTGTGGTCGTTAAAAAACTATTGTTTATAGTGTGG
TCGTTAGGGTTTGGGCTAGGGTTAGTTTCCAGGAAATTTACGGACTGCTG
AGCAGCCCACGTTGGTACTAATCATACATCTAATAAAACGAACATCCCAT
AGAACGTGCCTAAGGGGTCATACTACGATAGGGGGTGTACTCATTTCATA
CATGGCCGTAGTCGTATGACCATGGACCTTCGCATCCCAACTTTGCCGGG
ACGGAGCACGTCGGGTGTTCACCGCCCAGGCAGACATGGCGTTGCACCAA
GCGCGAAGCGCCGTGAGGTGCTGGGCGATTCGCATCAAGGGTGAGCTGCA
TCCTACTAAGAACCACTTGTGAGGCGGATTTCGGCACCTTGTGCGTACTT
TCTTGCATATAGATGGCAGCTTCGAATGAACAGTTTGTTTTCTGGTGTGG
CCACTTCCAGAGACAGTCATGGTATACTATGTAACTGCCTCGTGGGTGCC
TTACCATATATATATATACACTATGCATACGCGATATCATCCCACTTGCG
CGGAGTTCGGGTTCTCCATCCCACACAATACGATCTAACTCGACAACCAG
CCATGGTAACCGCCAACGGAGCGGGGGGTACTCATGTGTTGCTTCCCTTA
GTCGTTTGACCGTTGACGACGCATCCCTTTTGAGACGGACCACCATTCCT
ACACTTAATGGAGACACCTCCAACAGTTAGGCGCTCTTTACGTATTTTCC
ATGTATTGCATGAAAACCTTTTACTTACCTTATCCCCTTCTTGTTTTGGC
CTTTCGTGCCCACGATCTATCTCGTAGGATAGGTGGGGTGGGACTCGAGA
AGGCTTACGTACAGTACTACTCGTAGTACCAAAGCTGTATTCGTTTTGCT
AGACTATAGGTCTTACAGGGCGCGGTCGGTTGGGTTTTTCTTAGTAGCTT
TTGACGCTATTAGAGGGGACAACGCGGTTGTACAGACTGCGATGCAGTGC
GTACCAGGTGTAGCTGTAGATTTCCAGTGTATGGTACCGTAAACACGCCA
CAAAATGATGAAGAAGGGCTATTGCATAATCCGCGAAGGGGGCTAGGACT
CGAGCTACAATTGGCGTTAGTGTCGGGAATAAGAAATTACATGTATTTAC
AGAGGCCCATAACAAATAGGCCTAAAACCAGGTGAAATAAGGCGAGCGCA
AGTATCCTTATTGCCGACCCCACCTCCACCCCCCCCTCTTATGAGAATGA
AATTGTAGCATCGCTGATAAGTCTACTGTACTGCCACCGCATGATAATAA
CGCACGAGATCCGCGATTCACGCCGCGTCTGTCTGTCTCGCGATACACAC
GTCAATATACAGTAAGTGTTTTGGGCCTATTTATTAGGGGCCCTTGTGAT
AAGTGATTTGGTGCACCGTTCATTATAAAGTCGAGATATGAGTCATGCTA
CGGTAGGGTGGGGGGCATATTTGGGATCTGGATTTCAGCGGCTAAGGGTC
GCTCGTACGAGCGACTACCCCATATCTCTGCGGTTGCGAACTTTTGCGCA
ATTTCCTTTCGCGATGTGAACCATCGAATGATTGTTTAGTGCGCTGCGTG
AACACAATATTTGAATGTCCTATTGTGAGCGAGATACGGAGTCACTCGGA
CGGGTGACCTCCTCCCGGAAGTGAAATAACCCCGCCTATGCGCTAATTGG
GGGGGGCATGTTTGGTGTGCAATCTGCGTTGGTCTCTTTTTTTTTTGTTT
GCTGTACTTGCCACCTCATTTGCTCGAGTGTTTTTTTTCAACCATCATTG
TCAACCATTGTTGTCAAACCATTGTTGTCAAGCCATTGTTTTAAACCATT
GCTTTCAACCATCGTTATCAACAATTGTTTTCAACCATTGTTATCAACCA
TTGTTATCAACCATTGTTTTAAACCATTTTTCGATCATTGTTAGGGACCA
TTGTTATCAACCATTGTATTCGATCATTGTTAGGGACCATTGTCATCAAC
CATTGTTTTCAACCATTGTTTTCAACCAATATTTTTGACCATTGTTATCA
ACCATTGTTTTAAACCATTATCCTCCGGCGGACGAATAAAAATTGAAGCT
AAACCCTCACAAAACTGGCACGGTTTTATTTGTTAGCCGTTTTAAAGGTT
ATTTTTTTTCAAGCTCCCTCTATAATTATCATAATAATTATTATAATTAT
ATCGGTTACATTAGCCCGATCGCTCGGACCCGTGGTCACAAAGATAGGCA
CCTTTTTTTTACCGAAGTACCGACCCCATCGGCCCCTCCCCTATAAAGCT
CTTTTTACCGCTTGATGTTGCCGATTAGCACGCTTGTCATAGAAGACAAA
GATAGACAGTTGGCCCTTGTCAAAGCCCTACTTACGCTGGCTTTAATACA
TTTTTGTGTATGCTTCATGTGTCGGTACAATGTACAGCCGCGGCAGAGGC
AGCTGCCGCAGGGACGAAAGGCGGCGCAAGGCGGGGATGGAAAGGACACG
CAGGGGCTGTCTCGGGCATCGGGGTGGACGCGGTGAACAAGACCATGGTG
TCTGCCGGAGTGGACGGTCTACTGGTGTTCTGGTCGTTCAACGAGAAACG
GGCCGATGGGGCCGTGGTCGTTGGGTCGGGCGTGTCTCAGCTTGAGCTGG
TGAGAGACTGGAGGAAGAGCCGCCTTAGCTTTTTTTTAGGATGGATCTTT
GGGATTGTTCGTTTTTTTGTATCGTTAGTAACATTGATGAAAGAAAAATA
ATTACATTGGTTGATTGATTGGTGATTGGTGTTCATGATGCCGTAAATAG
TGCTCGGATTAACTTCAAACCAGTCTGGATTGTGGATCTTCCGATCTTTC
CTGCCCGGCCGTTAAGTTTACAAGTATTTAGACTAGAGAAAGAATATTTG
TATAATTAATATTATTATTAATATTAAATTAATATTATTATTAATATCGT
CTCCTACGAAAGTGAAAATAAATTAGTGTCTTGAATTAGTATGAATTAAT
TAATTTTTTGGCGTTTCATACTATTCATAGAATTTCTACCTACTACCTAC
TACTACTATTATTATTTTTCTTACAAAGACATCAGCCGTGACGTTCCAAA
CTGGTTCGGGGGCCAGGGGATATTATTTAATTAGTTGTATAATTAATATT
ATTAATAATATTTAAGTAATTAATTAATTTTATGAAGGAAGGAGACGATA
TAGCAGAGTTCTATGATAAAAGAAAAGTAATTAATTAATTCATGATGTAG
CAGAGTTCTATGATAAACGAAAAATAATTAGTTAATTTCGGGAAAGGATT
AACCTATACTAACAGTGAGTAATGGCTTTCTCAGAAATTTCTCTCTAAAA
CGTGCCAATAAACGAAATTACTACTATCATACTGTAGTGGTACAGTTGTT
GTGTAGTAGTAGTGGTAGCAGTAGTTAGTAGGTAGTAGGTAGAAATTCTA
TTAATAGCATGAAACGCCAAAAAAATAATTAATTCATACTAATTCAAGAC
ATTAATTCATTTTCACTGAGGAGGAGACGATATCGGCTGTTCAGCATTTC
GGAAAATCTATCACGTCGCCCTCTGACCCGGACCCTATCGGACACACCTA
TACTAATAGCAAGTCAAAACTTTTCTAAATACTAAGAGCGGTAAACCTAC
TGGATTACGAAGTATTTAGAGATCCGTCGTACAAAAAAAATGTCTCTAAA
TTTTCGTACTACGAAAGCGGGGTGGAAGTCGTACGAGTGTCGCATGGCGG
TATTGTTCCTTTGGCCGGCTGAAGCTGTTATTTTGCAAGGATGGCAGAGT
CCGCCTCTCCGGGAGGAGGGAAGACCCAAGCGGGTTCACTGTTGTTCTGC
CGTCTGCCGTCGTATGTCGTGCATAGGATATATATATCGGGGTTTTTTTG
TTTTTTTTTTTGTTCCATTTATTATCTTCGCTCTGTTCTTCGTCTATGAT
AGCTCCATCTCTCTTCATAACTCAGGTCCGGGGTCACATAGTAGGCACTC
CTTCCGCCTTCCCACTACGGTACCCGTCTACCTTTTTATCGCGAGAAGAG
TGAAGCACTTTCTTCCGTTGTCGACTTTCATCGAGTTGTGCTTACTCACG
CTGTCACGTTTTCCGCGACGGAAGATGGCACAGAAAAGTGCCATTTTGGT
GTCACCGGGAATTCCGCCTACAGAGGCAACACCCTAACCATTAGACCATC
GTTTGCCGTCGCGTGGTACGTGTGGTGTTTGCACAGTTCCATACATACGT
ACTCTTGCGTCTTGGTGTGTTTACTCCTGAGTGTACGCTGGTGCTGCCTT
ATTACGGTACGACCGTGTTGCCTCCCCCCCCCCCCCCTCCTGGGGACCCC
ATGGCGAGACCTACAGAGAAAGCTGCAGCTCCAGCTGTAGCTGTAGCTGT
AGCTGACGATCGGATATATCTCATTATCGACTTTTCTTATGGTCCTTTTT
TTGGTTTTCATAGTTGTTGACTTATTTTGTTATGAGTTTCTTTCGAGTCT
GTGAATTGTTTTCTTTTTCTTGTGAAAGGAGGCGTTATTGTGCTGGGTTT
TATGACCACAGGGGAGATTTTTTTGAGAGCAGCTAATAGGAGAAGCAACA
AAGAACAAAAACTCGTAAAACTATCTGCATCATGTGTAGGCGCCCTGGCA
CGCCGCAGTATCCTCGAGTGGCCCGCGTGCATTATTGTGCTTGCGTTACT
CTTTTGTGGCTTTTGTCATGCTCTAACGCTCGCGCTGCGACATGCGTGGT
GTCCTGTCGGTAGGTGCGCGACACAGACTTGGTAGCTCTAGCGTGCGACG
ACAAAGTGGTGAGGCTGTACGACCTGGCCACTCGAAAGCTTGTGCGTAGG
CTAGCGGGGCATACCAACCACCTGACCGACATGTGCTTCACTCCAGACGC
CAGGCGTCTCATCACGGCGTCAATGGACCACACCGTCAGGTAATGAAGCA
CGGTCATCTTACGATGGGGAGGGGGTACTTATTGGTAGCTTGCCTTAATA
TTTGACCGAAATAAAATTGCATGGCTGTAGTCGTATGACCATAGACCCTC
GCATCCCTACACTATCGGGACGGAGCACGTCGGGTGTTTATCGACCAGGC
AGACATCGTGTGCACCAAGCGCGAGGTGTTCGGCGATTTGATACGGGGGG
GGGTACTCATTTGTTATGGGTCGGAGTCGTTTGACCTTTTTTTTTTTGTG
GGCAAGATTGAGCCGAGTGAGCCACATGACCCGTTACCGTCCCGCGTCTA
AAAATGATATATTTCAGTACTCTATAACCACTTACTTCGAAGTACACTAT
GTGTTGTTGTTGTTTTCACATTAAACAAACGTCGTTTCTAATTTATGACA
TCCAGTTGTGTACTAAAGGGTCTGTACTGAAGCTTCCACTGTTTGGTTTA
TGAAAATACGATCGTGCTTGTCCTTGCAGTATCTACCCGTGTTCAATCAA
TCAATCAACCAACCATCCAACAATCTCAAGAGCACCCGTGGTGCAGTTTT
GTGTATGTCAGGATCTAGGTTTATTTTTGTCCGTTGGATTTTATATCCGT
TTTTTTTGTTGGTGAGGATGTAGCTTTACTTTTTGTCCGTTGGATCTTAT
ATCCGTTTTTGTTTGTTTGTCAGGACTTGGGCTTAATTTGTATCCGTGGA
TTCTATATCCGTTTTTTTTTTGTCAGGATTTAGGTTTATTTTTTGTCGGT
TGGATTTTATATCCGTTTTTTTTGTTTGTGAGGATGTAGCTTTATTTTTT
GTCCGTTGGAATTTATATCCGATTTTTTGTTTGTCAGGACTTGGGCTTAA
TTTTTATCCGTTGGATTCTATATCCGTTTTTGTTTTTGTCAGGATGTGGG
TTTATTTTTGTCCGTTGGATTTTATGTCCGTTTTTTGTGTGTCAGGATTT
GGGATCTTCCTACTGGTCGCATGGTTGACTGGATGTGGCACAAGAAGGCT
GTGACCGGGGTGACAGTCTCGCCCACAGGAGAGTTCATGTGCACCAGCCA
CCACGGTCGGGTCGGGCTAAACGTGTGGGCCGACCAGAGGTGAGTTGTAC
AAACTGCCTCCTAGCTCGGAATGCCTCCGTACTTTTTCAGCTGAATGCCT
TTAAACAAGTAAAAGCAATCTCATCGAAAAGCTCTAGGCCGCTGTGGTGC
CTCCGTTCGGTCGCGTTTTCGATAGTATGGAAGGCTCTCTACTTTCGGCC
GCATGCATGCTGCGTGGCGCCGATTCAGCGACCCGCCTTCTTAGCATTTT
TTTTAGCTGGGATCCCTAGGATTGCTCGGGGGTTTTTTATTTGATGTATG
ATGTATGATGTATGATTGGTCAACAACGTCGGCTGTTGAGCGGTTCGGAA
AATTCTGCCGCTAGTCCTAACCTGAACCCTGCCGGACACACGAACACACC
TATACTAATAGCAAGTCAAAACCTCCCTTCAGACACGAGATAAACTAACT
ACTTTAGCAGTAAATGTATTATTGATAGTGATTTTTGCATTGTTTTGCGC
CGGAACCAACGCAACGAACTGCCGAGTCTCTAGCAGACGGAGCACAAGAC
AACAGCGTGCCACCGTGATATATATATATACTTCGTATACGGGGAAAAAA
GCCAGGTTTGGAAAGCAGAGGACTCTTGTTTTGATTTTTTCATGTTATTT
TTTTCGTTGAAGAGTATGTCCGTTTTTCTTGGGCCTTGTCCGCGACGTCT
TCGCAATGTGGTCCACTACGATGTGCTCTACCATCATCGGTCCTGTAGAC
CTTCATTTTTACTACTCCACTACGGTGGTGCTCATGATTGTGTTCCATGA
GACGATACTTCTTTTTTTTTTCGACGGATGGGTAAAAGCAGCGCAAAATT
TCCACGTTTCAGCTTTTATGAAGGTTTTCTCTATTTTTGTGTCAACCTCT
CTTTGAGATGGGACGTACAGCGCCAAGCACTTGACAGTAGTCCGATGGCC
CTTTTTCCTTGTTGGTGCTTCGTTTTGTTGCAAGCTTCTTCCAGCCGGTG
TACCTAGACAAGGTTCCGGCTACGCCGTTCAAGATGGACGAGCCGGCGCC
GCTGATCGAAGACAGGTGA
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig9368:235..11353-

>mRNA_D-dudresnayi_contig9368.28159.1 ID=mRNA_D-dudresnayi_contig9368.28159.1|Name=mRNA_D-dudresnayi_contig9368.28159.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2364bp|location=Sequence derived from alignment at D-dudresnayi_contig9368:235..11353- (Desmarestia dudresnayi DdudBR16 monoicous)
GCAGATTCTACAGCCTTGTGCGTGCTATCGGCGGGTACGGACCGGTCATT
CCGAGTGTTCCACACCGTCAGAGATTGCCTCAGCCAGGAACTTTCTCAGA
AGCCGCTCGTCAAGGCAGATTCTACAGCCTTGTGCGTGCTATCGGCGGGT
ACGGACCGGTCATTCCGAGTGTTCCACACCGTCAGAGATTGCCTCAGCCA
GGAACTTTCTCAGAAGCCGCTCGTCAAGGTGGCTACTCGACACCGGGTGA
CAACCCAGGACGACTTCAAGTTGAGGCCTGTGCTGTCGTTTGCAGCTAGC
GAGACGAGGTCGAGGGACTGGTGCAACATCATCACATGGTGGCTACTCGA
CACCGGGTGACAACCCAGGACGACTTCAAGTTGAGGCCTGTGCTGTCGTT
TGCAGCTAGCGAGACGAGGTCGAGGGACTGGTGCAACATCATCACATGCC
ACGAGGAAGACAGCAACGCGTACGTGTGGAGCTACGCGAGGCGCGCCATT
GGAACCCACGTCTTGAGGCAGAAGCACTGGCCGGGGAACGCGATGATGCA
CCCACCTGATCCGAGCACGTTTGCCACTTCGGTGGCCATCAGCCACGAGG
AAGACAGCAACGCGTACGTGTGGAGCTACGCGAGGCGCGCCATTGGAACC
CACGTCTTGAGGCAGAAGCACTGGCCGGGGAACGCGATGATGCACCCACC
TGATCCGAGCACGTTTGCCACTTCGGTGGCCATCAGCGGCTGCGGAGACT
ACGGCCTTGTCGGTACGAGAGGTGGTCATATATTCCGCTACAACATGCAG
TCGGGGCAGGCCAGAGGGTCGTACCCGCAGTCGGCGACCCCTTCTCCCAA
GGCTGTGAAGGCGCTCAAGAACGTCATGAAGCCGGGGTCGATCGCCAAGA
TCACGTCGGACGGCTTCTCCAGCAAACGAATAGCGGCTGCGGAGACTACG
GCCTTGTCGGTACGAGAGGTGGTCATATATTCCGCTACAACATGCAGTCG
GGGCAGGCCAGAGGGTCGTACCCGCAGTCGGCGACCCCTTCTCCCAAGGC
TGTGAAGGCGCTCAAGAACGTCATGAAGCCGGGGTCGATCGCCAAGATCA
CGTCGGACGGCTTCTCCAGCAAACGAATAGCCGCGGCAGAGGCAGCTGCC
GCAGGGACGAAAGGCGGCGCAAGGCGGGGATGGAAAGGACACGCAGGGGC
TGTCTCGGGCATCGGGGTGGACGCGGTGAACAAGACCATGGTGTCTGCCG
GAGTGGACGGTCTACTGGTGTTCTGGTCGTTCAACGAGAAACGGGCCGAT
GGGGCCGTGGTCGTTGGGTCGGGCGTGTCTCAGCTTGAGCTGCCGCGGCA
GAGGCAGCTGCCGCAGGGACGAAAGGCGGCGCAAGGCGGGGATGGAAAGG
ACACGCAGGGGCTGTCTCGGGCATCGGGGTGGACGCGGTGAACAAGACCA
TGGTGTCTGCCGGAGTGGACGGTCTACTGGTGTTCTGGTCGTTCAACGAG
AAACGGGCCGATGGGGCCGTGGTCGTTGGGTCGGGCGTGTCTCAGCTTGA
GCTGGTGCGCGACACAGACTTGGTAGCTCTAGCGTGCGACGACAAAGTGG
TGAGGCTGTACGACCTGGCCACTCGAAAGCTTGTGCGTAGGCTAGCGGGG
CATACCAACCACCTGACCGACATGTGCTTCACTCCAGACGCCAGGCGTCT
CATCACGGCGTCAATGGACCACACCGTCAGGTGCGCGACACAGACTTGGT
AGCTCTAGCGTGCGACGACAAAGTGGTGAGGCTGTACGACCTGGCCACTC
GAAAGCTTGTGCGTAGGCTAGCGGGGCATACCAACCACCTGACCGACATG
TGCTTCACTCCAGACGCCAGGCGTCTCATCACGGCGTCAATGGACCACAC
CGTCAGGATTTGGGATCTTCCTACTGGTCGCATGGTTGACTGGATGTGGC
ACAAGAAGGCTGTGACCGGGGTGACAGTCTCGCCCACAGGAGAGTTCATG
TGCACCAGCCACCACGGTCGGGTCGGGCTAAACGTGTGGGCCGACCAGAG
GATTTGGGATCTTCCTACTGGTCGCATGGTTGACTGGATGTGGCACAAGA
AGGCTGTGACCGGGGTGACAGTCTCGCCCACAGGAGAGTTCATGTGCACC
AGCCACCACGGTCGGGTCGGGCTAAACGTGTGGGCCGACCAGAGCTTCTT
CCAGCCGGTGTACCTAGACAAGGTTCCGGCTACGCCGTTCAAGATGGACG
AGCCGGCGCCGCTGATCGAAGACAGGTGACTTCTTCCAGCCGGTGTACCT
AGACAAGGTTCCGGCTACGCCGTTCAAGATGGACGAGCCGGCGCCGCTGA
TCGAAGACAGGTGA
back to top