mRNA_D-dudresnayi_contig93.28093.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig93.28093.1
Unique NamemRNA_D-dudresnayi_contig93.28093.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig93.28093.1 vs. uniprot
Match: A0A7S3HIV9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIV9_9STRA)

HSP 1 Score: 669 bits (1726), Expect = 2.350e-228
Identity = 350/469 (74.63%), Postives = 380/469 (81.02%), Query Frame = 1
Query:  214 NTSIRVLFVVPTEPLVWQVAAYFTKLLREEGDQDTKVGVVTDHLTYYPPKKFDVMPQIVVGTPFALETALTKPRGLVGKFETNKRAQGDLLPGGFDHFDWAIYDEVHALDGAEGAALQRLIRSMNCKFLALSATVGNAEELRGWMERARGDNILGLEAIDVTEEEVGTSTAGIEKDLQTKATIKTAAAGAHKVRIVKTLTQESRTIT-LNAEDTLQTLKETIATAWPELLDAATQQTP----------------------------------------ADGEEVIYVRSFVNMLTHHGRFINLQRYVWNQPTAEAAGVLQTASPLLAVESVESLRSGVLDNSSLSFTSRDSYRLWEEIKRIYPSDAPILQQLSPYTFFRADERITLQRTKDYEDLLKTGLKTLAEQFPVETQELLHAFQIPDPAKEFDLCELVLDLKARDMLPCLPFHLNTFEAVRLFQNLLAGIEWRQ 1497
            N+SIRVLFVVPTEPLVWQVAAYFTKLLR+EGDQD+KVG+VTDHLTYYPPKKFDVMPQIVVGTPFALETALTKPRGLVGKFETNKRAQGDLLPGGFDHFDWAIYDEVH+LDGAEGAALQRLIRSMNCKFLALSATVGNAEELRGWMERARGD  LGLEAIDVT +EVG     + KDL++KA IK     + K+RIVKT+T E + I  L A DTLQTLKE +A  WP L D A    P                                         D EEV+YVRSFVNMLTHHGRFINLQRYVWNQ     +GVLQTASPLLAV+SV+SL+ GVLDNSSLSFTSRDSY+LWEEI+RIYP+DA I+ QL+P  FF  +ERITLQRTKDYEDLLK+GLKTLA+QFPVET+ELLHAFQIPDPAKE DLCELVLDLK RDMLPCLPFHLNTFEA+RLFQN+LAGIEWRQ
Sbjct:  397 NSSIRVLFVVPTEPLVWQVAAYFTKLLRQEGDQDSKVGIVTDHLTYYPPKKFDVMPQIVVGTPFALETALTKPRGLVGKFETNKRAQGDLLPGGFDHFDWAIYDEVHSLDGAEGAALQRLIRSMNCKFLALSATVGNAEELRGWMERARGDYELGLEAIDVTPDEVGV----LAKDLKSKAVIKVDTQASGKIRIVKTVTNEFKVIANLKATDTLQTLKERVAAEWPAL-DTAMPDKPHTAHLFQMLFQGQDLVEDTIQGVARGASRTLGSFGLFQNGPDAEEVVYVRSFVNMLTHHGRFINLQRYVWNQSATLGSGVLQTASPLLAVQSVQSLQEGVLDNSSLSFTSRDSYKLWEEIRRIYPADAAIVHQLNPNNFFGKEERITLQRTKDYEDLLKSGLKTLADQFPVETKELLHAFQIPDPAKELDLCELVLDLKGRDMLPCLPFHLNTFEAIRLFQNILAGIEWRQ 860          
BLAST of mRNA_D-dudresnayi_contig93.28093.1 vs. uniprot
Match: A0A836CAV0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAV0_9STRA)

HSP 1 Score: 452 bits (1163), Expect = 3.680e-141
Identity = 300/742 (40.43%), Postives = 408/742 (54.99%), Query Frame = 1
Query:   22 MQSESDMIRLQLVEMSDSLPPLTKFNFGLRLDPWQKRVLAWIDAGKSVVICAPTSSGKTVLSSY----NTSIRVLFVVPTEPLVWQVAAYFTKLLREEGDQDTKVGVVTDHLTYYPPKKFDVMPQIVVGTPFALETALTKPRGLVGKFETNKRAQGDLLPGGFDHFDWAIYDEVHALDGAEGAALQRLIRSMNCKFLALSATVGNAEELRGWMERARGDNILGLEAIDVTEEEVGTSTAGIEKDLQTKATIKTAAAGAHKVRIVKTLTQESRTITLNAEDTLQTLKETIATAWPELLDAATQQTPADGEEVIYVRSFVNMLTHHGRFINLQRYVWNQPTAEAAGVLQTASPLLAVE-SVESLRSGVLDNSSLSFTSRDSYRLWEEIKRIYPSDAPILQQLSPYTFFR--AD-ERITLQRTKDYEDLLKTGLKTLAEQFPVETQELLHAFQIPDPAKEFDLCELVLDLKARDMLPCLPFHLNTFEAVRLFQNLLAGIEWRQKRDHPTYYME--QKLEKDARRKEMEAKVKSTGKNDKVSALDEAAKAGDIDLDQNFEVDEYLPHPSYTFTKG-MPMSELELTTLIDDMEKNDGFAKRDANAMSNLKGKNQGILKHALIRGLRRGIGLFIDEVSFPSYRRAVQRLASTGKLAVVISDDSLAFGVNMPFRTCVFCGEMFGLLDELMAQQMSGRAGRRGLDTQGNLVYAGMRVSRIRRLMIGTVSNITGKDHNPRYESLILQPILA 2214
            ++ E DM+  QL EM+D LPPL++F+ G +LD WQKRVLA +D  +S ++CAPTSSGKTV+SSY    + + RVLFVVPTEPLVWQVAA F KLL+        VG+  D + + P    D+  +++VGTP  LETAL+K RG  G    NK     +  GGF  FD+AI+DEVH+LDG EGAALQRLI+ ++C FLALSAT+GNA+EL+ W E  RG  +  +E I+                                                                       A Q+ P+D  + +   S + +  H GRFINLQR VW       AG  +   PL AV   +  +  G     SL FT +D+Y LW  +   +P+D   +  L P  FF   AD +RITLQ +KDYED L + L+ +A++ P ETQ LL +F         D+     D+KA+D+ P + FHL++F  + LF+ LL+ +E  Q R +P Y  E  +K E+  R +   AK +     ++    +EA  + D+D    F VD   PHP +      M +S  E   +  ++          A +M   + K+ G   H  +R LRRG G++ID+ SFP YRR VQ+LA  GKLA V SD+SLA+GVNMPFRTC FC  M G+L  L+AQQMSGRAGRRGLDTQGNL++  M   RI+ LM+GT+  I G+D  P+Y ++ LQ  L+
Sbjct:  202 LREEEDMVVFQLTEMADRLPPLSRFSTGWKLDDWQKRVLAVVDRHQSAIVCAPTSSGKTVISSYVASDSAASRVLFVVPTEPLVWQVAALFHKLLKGS------VGLCMDQMHFRP----DINLRVIVGTPQPLETALSKLRGPAGDEALNKVDYAQMQ-GGFA-FDYAIFDEVHSLDGDEGAALQRLIQGLSCNFLALSATIGNAQELKEWWEGIRGQQLEDVEMIE-----------------------------------------------------------------------AAQEGPSDEPKQLTDAS-IFLEEHSGRFINLQRMVWMGD----AGQFKPLHPLAAVTLDMLKVEGGCFHTFSLPFTPQDTYALWRGMMAAFPADK--INDLQPVDFFAKYADSKRITLQMSKDYEDALCSRLEVMAQEMPTETQSLLTSFHPGPVGSAVDVATAARDIKAKDLCPAIMFHLDSFHCLSLFKELLSDLELGQSRKYPNYLKELQEKAEELNRLRAQAAKRRVANAKEQE---EEAKDSADMDPTAEF-VDTAAPHPEFVLAPPTMRLSSKEYEDICGEL----------APSMGKGELKHPG---HPFLRALRRGFGIYIDDASFPKYRRIVQKLAQQGKLAFVFSDESLAYGVNMPFRTCCFCESMEGILTPLLAQQMSGRAGRRGLDTQGNLLFMNMSWPRIQYLMLGTIPAIQGQD--PQYPTVALQHALS 834          
BLAST of mRNA_D-dudresnayi_contig93.28093.1 vs. uniprot
Match: D7FZQ4_ECTSI (Helicase ATP-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZQ4_ECTSI)

HSP 1 Score: 453 bits (1166), Expect = 1.000e-140
Identity = 305/746 (40.88%), Postives = 409/746 (54.83%), Query Frame = 1
Query:    1 LRKCRKIMQSESDMIRLQLVEMSDSLPPLTKFNFGLRLDPWQKRVLAWIDAGKSVVICAPTSSGKTVLSSYNT-----SIRVLFVVPTEPLVWQVAAYFTKLLREEGDQDTKVGVVTDHLTYYPPKKFDVMPQIVVGTPFALETALTKPRGLVGKFETNKRAQGDLLPGGFDHFDWAIYDEVHALDGAEGAALQRLIRSMNCKFLALSATVGNAEELRGWMERARGDNILGLEAIDVTEEEVGTSTAGIEKDLQTKATIKTAAAGAHKVRIVKTLTQESRTITLNAEDTLQTLKETIATAWPELLDAATQQTPADGEEVIYVRSFVNMLTHHGRFINLQRYVWNQPTAEAAGVLQTASPLLAVESVESLRSGVLDNSSLSFTSRDSYRLWEEIKRIYPSDAPILQQLSPYTFFRADE--RITLQRTKDYEDLLKTGLKTLAEQFPVETQELLHAFQIPDPAKEFDLCELVLDLKARDMLPCLPFHLNTFEAVRLFQNLLAGIEWRQKRDHPTYYMEQKLEKDARRKEMEAKVKSTGKNDKVSALDEAAKAGDIDLDQNFEVDEYLPHPSYTFTK-GMPMSELELTTLIDDMEKNDGFAKRDANAMSNLKGKNQGILKHALIRGLRRGIGLFIDEVSFPSYRRAVQRLASTGKLAVVISDDSLAFGVNMPFRTCVFCGEMFGLLDELMAQQMSGRAGRRGLDTQGNLVYAGMRVSRIRRLMIGTVSNITGKDHNPRYESLILQPILA 2214
            L+  RK+  S+ DM   QLVEM D LPPL++F  G +LD WQKRVL  +D   S ++CAPTSSGKT++S+Y T     S ++LFVVPTEPLVWQVAA F KLLR +      V +  D + Y P    D+  + +VGTP ALETALTK RG VG  E   +     + GGFD FD+A+YDEVH+LD  EG ALQRLIR++NC FLALSAT+GNA++L+ W    +G+    LE I+                         A AG  +   V                                        P  GE  +Y+        H GRFINLQRYVW   T           P  A+ SVE L+SG  +  SLSFT  D+Y+LWE     YP +A  ++ L P  FF   E  RI+LQ+ KDYE++L   L+ L+   P ET +LL  F       +  + + V+D+K + + P + FHL+TF A+ LF+ LL  +E +Q+  +P +  EQ+ +     +    + K   +N K +  +E  K GD D    F VD   PHP +  +     +S  E   + +D+            A  N KG+ +   +H  +R LRRG G++ID+ SF  YRR VQRLA  GKL+VV SD+SLA+GVNMPFR+C FCG M GLL+ L+AQQMSGRAGRRGLDTQGNL+Y  M   +I+ LM+G +  I G+D  P+Y ++ L   L+
Sbjct:  264 LKAARKLRDSQ-DMTEYQLVEMHDRLPPLSRFTTGWKLDEWQKRVLRQVDKKNSAIVCAPTSSGKTIISTYVTVAAGASGKILFVVPTEPLVWQVAALFNKLLRGQ------VAICMDQIYYRP----DIELRTIVGTPMALETALTKLRGAVGD-EVVGKLDYTQMKGGFD-FDYAVYDEVHSLDSEEGDALQRLIRAVNCNFLALSATIGNAQQLKDWWTEVQGEQARDLEVIEAP-----------------------AGAGEGRRGFV----------------------------------------PPSGE--VYLEE------HSGRFINLQRYVWMGST------FVNLHPCSAM-SVELLQSGRTEEVSLSFTPHDTYKLWEAFLEFYPEEA--VKDLEPAGFFAKYETNRISLQQAKDYEEVLVKRLEKLSTDNPKETGDLLQRFNPGTVGPDVSIYDAVIDMKDKGLCPVIAFHLDTFMALSLFKELLKDVEVQQRNKYPNWAEEQRKKAAELARVRAIREKKMDRNKKEA--EEEEKEGD-DETSGF-VDVTAPHPEFVLSPPNARVSSREFEDICEDL------------APPNGKGELKNP-QHPFLRALRRGFGIYIDDASFSRYRRVVQRLAQQGKLSVVFSDESLAYGVNMPFRSCCFCGSMDGLLNPLVAQQMSGRAGRRGLDTQGNLLYMNMAWPKIQGLMLGDIPAIVGQD--PQYPTIALHHALS 897          
BLAST of mRNA_D-dudresnayi_contig93.28093.1 vs. uniprot
Match: A0A7S3HIE8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIE8_9STRA)

HSP 1 Score: 417 bits (1072), Expect = 4.550e-134
Identity = 210/246 (85.37%), Postives = 230/246 (93.50%), Query Frame = 1
Query: 1477 AGIEWRQKRDHPTYYMEQKLEKDARRKEMEAKVKSTGKNDKVSALDEAAKAGDIDLDQNFEVDEYLPHPSYTFTKGMPMSELELTTLIDDMEKNDGFAKRDANAMSNLKGKNQGILKHALIRGLRRGIGLFIDEVSFPSYRRAVQRLASTGKLAVVISDDSLAFGVNMPFRTCVFCGEMFGLLDELMAQQMSGRAGRRGLDTQGNLVYAGMRVSRIRRLMIGTVSNITGKDHNPRYESLILQPILA 2214
            AGIEWRQK+DHPTYY+E + EKD R+K++ A++K+TGKNDK  ALDEAAKAGDIDLDQNFEVDE+LPHP+YTFTKGMP+S+LELT LID+MEKNDGF KRD  AMS LKG+N  ILKHALIRGLRRGIGLFIDEVSFPSYRRAVQRLAS GKL VVISDDSLAFGVNMPFRTCVFCGEMFG+LDELMAQQMSGRAGRRGLDTQGNLVYAGMRVSRIRRLMIGTVS+ITG+DHNPRYESL LQP+L+
Sbjct:    1 AGIEWRQKKDHPTYYLEMQQEKDLRKKDVAAQIKNTGKNDK--ALDEAAKAGDIDLDQNFEVDEFLPHPNYTFTKGMPLSDLELTNLIDEMEKNDGFEKRDNTAMSKLKGQNLSILKHALIRGLRRGIGLFIDEVSFPSYRRAVQRLASAGKLGVVISDDSLAFGVNMPFRTCVFCGEMFGMLDELMAQQMSGRAGRRGLDTQGNLVYAGMRVSRIRRLMIGTVSHITGRDHNPRYESLALQPVLS 244          
BLAST of mRNA_D-dudresnayi_contig93.28093.1 vs. uniprot
Match: A0A4D9CYE4_9STRA (Helicase ATP-binding domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYE4_9STRA)

HSP 1 Score: 430 bits (1105), Expect = 3.970e-130
Identity = 299/769 (38.88%), Postives = 421/769 (54.75%), Query Frame = 1
Query:   37 DMIRLQLVEMSDSLPPLTKFNFGLRLDPWQKRVLAWIDAGKSVVICAPTSSGKTVLSSYNT--SIRVLFVVPTEPLVWQVAAYFTKLLREEGDQDTKVGVVTDHLTYYPPKKFDVMPQIVVGTPFALETALTKPRGLVGKFETNKRAQGDLLPGGFDHFDWAIYDEVHALDGAEGAALQRLIRSMNCKFLALSATVGNAEELRGWMERARGDNILGLEAIDVTEEEVGTSTAGIEKDLQTKATIKTAAAGAHKVRIVKTLTQESRTITLNAEDTLQTLKETIATAWPELLDAATQQTPADGEEVIYVRS---FVNMLTHHGRFINLQRYVWNQPTAEAAGVLQTASPLLAVESVESLRS----------------GVLDNSSLSFTSRDSYRLWEEIKRIYPSDAPILQQLSPYTFFRADERITLQRTKDYEDLLKTGLKTLAEQ---FPVETQELLHAFQIPDPAK---EFDLCELVLDLKARDMLPCLPFHLNTFEAVRLFQNLLAGIEWRQKRDHPTYYMEQKLEKDARR-----------KEMEAKVKSTGKNDKVSALDEAAKAGDIDLDQNFEV----DEYLPHPSYTFTKGMP-MSELELTTLIDDMEKNDGFAKRDANAMSNLKGKNQGILKHALIRGLRRGIGLFIDEVSFPSYRRAVQRLASTGKLAVVISDDSLAFGVNMPFRTCVFCGEMFGLLDELMAQQMSGRAGRRGLDTQGNLVYAGMRVSRIRRLMIGTVSNITGKDHNPRYESLILQPILA 2214
            D+I  QLV+M++ LPPL++F FG  LD WQKRVL  ID  +SV++CAPTSSGKT+LSSY T  + ++LFVVPTEPLVWQVAA F K+L  E      V VVT+ + Y P ++     +++VGTP ALE+AL+KPRG  G  E   +       GGF  F++ IYDEVH LDG EGAALQR+I+++ C FLALSAT+GN   LR W +              V E+ VG   A +E  L  +   +T   G     + + +      ++      ++ LK    +   +  DAA    PA  +  + V S    V ++ H  RFINLQR+VW      A   L+T  PL A+ S+  L+S                G  + ++L FT  DS++LWE ++  +  +  +++ + P        RITL+R+K+YEDLLK  L  LA Q      + +E+L  F  P  A+   +F L ++VL +K     P + F L+T+  V LF+ LL      +K  HPTYY +   +++AR            K  + KVK   + D+     EA +  D   D    V    D+  PHP + F+  +  +++ ELT +++ + K++  ++                  H  I+GLRRGIGL++D+     YRR VQ LA  GKLAVV SD SLA+GVNMPFRT  F G+   LL  LMA QMSGRAGRRGLD QGNLVY  M   RI+ LM+G +  I G++  PRY +++LQ +L+
Sbjct:  381 DVIEFQLVKMANRLPPLSRFTFGRSLDAWQKRVLGLIDERRSVIVCAPTSSGKTILSSYVTMRADKILFVVPTEPLVWQVAAMFYKVLGGE------VAVVTNQIVYNPKREDPRDWRVIVGTPLALESALSKPRGREGA-EMLGQQDFSTFRGGFHEFEYVIYDEVHTLDGEEGAALQRIIKAVRCNFLALSATIGNGPALRDWWQ-------------GVHEDHVGQERAEVEAMLAGRGD-QTREEGEDYEMLARLVRMRYIHLSPAQGPDVKALKGRWTSVRAKCRDAARASPPAPQDVFVPVPSSQTVVELVDHKARFINLQRWVW------AGNQLKTLHPLAAM-SLGFLKSSASTKETSGQGPDQNGGGHEEAALPFTPYDSFKLWEALRDAFEEE--VVEDVDPEEVL-GGRRITLERSKEYEDLLKAKLMALASQGGEAEAKVEEILKTFAPPPDAQANEDFRLVDVVLHMKEAGFFPAIFFRLDTYSCVELFKQLLVKTAEEEKARHPTYYADLTKKREAREVLARKVRDAAEKRKDKKVKKRVEVDERGNRVEAERDDDDPADAVGSVPPPVDDTAPHPDFVFSSPVNRITDSELTEILEKLSKDNIDSE------------------HPYIKGLRRGIGLYVDDSHTQEYRRVVQSLAQQGKLAVVFSDHSLAYGVNMPFRTSTFVGDDPELLTPLMAAQMSGRAGRRGLDEQGNLVYLDMPWERIKVLMLGCIPAIRGRE--PRYPTMVLQHVLS 1098          
BLAST of mRNA_D-dudresnayi_contig93.28093.1 vs. uniprot
Match: A0A7S1ZG66_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZG66_TRICV)

HSP 1 Score: 400 bits (1029), Expect = 8.980e-122
Identity = 286/754 (37.93%), Postives = 401/754 (53.18%), Query Frame = 1
Query:    1 LRKCRKIMQSESDMIRLQLVEMSDSLPPLTKFNFGLRLDPWQKRVLAWIDAGKSVVICAPTSSGKTVLSSYNTSI--RVLFVVPTEPLVWQVAAYFTKLLREEGDQDTKVGVVTDHLTYYPPKKFDVMPQIVVGTPFALETALTKPRGLVGKFETNKRAQGDLLPGGFDHFDWAIYDEVHALDGAEGAALQRLIRSMNCKFLALSATVGNAEELRGWMERARGDNILGLEAIDVTEEEVGTSTAGIEKDLQTKATIKTAAAGAHKVRIVKTLTQESRTITLNAEDTLQTLKETIATAWPELLDAATQQTPADGEEVIYVRSFVNMLTHHGRFINLQRYVWNQPTAEAAGVLQTASPL--LAVESVESLRSGVLDNSSLSFTSRDSYRLWEEIKRIYPSDAPILQQLSPYTFFRADE----RITLQRTKDYEDLLKTGLKTLAEQFPVETQELLHAFQIPDP-AKEFDLCEL----VLDLKARDMLPCLPFHLNTFEAVRLFQNLLAGIEWRQKRDHPTYYMEQKLEKDARRKEMEAKVKSTGKNDKVSALD--EAAKAGDIDLDQNFEVDEYLPHPSYTFTK-GMPMSELELTTLIDDMEKNDGFAKRDANAMSNLKGKNQGILKHALIRGLRRGIGLFIDEVSFPSYRRAVQRLASTGKLAVVISDDSLAFGVNMPFRTCVFCGEMFGLLDELMAQQMSGRAGRRGLDTQGNLVYAGMRVSRIRRLMIGTVSNITGKDHNPRYESLILQPILA 2214
            L+  RK++  +SD+I  QL+EM+D LPPL+++N   RL+ WQ  VL  ID  +S V+CAPTSSGKT+LS+Y   +  R LFV+P+E LVWQVAA + +  R        V + TD + +   ++     Q+ +GTP ALE +LTK RG  G+  T    +  +L GG+  FD+ + DEVH L+G EG ALQR+I++ NC  LALSAT+GNA +L+ W  R R ++ L  +AIDV +++V                                                 TL+E  A                                   RFINLQRYV  +   +          L  +A  + + L++     S+LS T  D   LW+ ++ I+PS A + +   P  FF+       RITL +TK+YE  LKT L  LAE  P E  + LHA Q+P P   + D+ ++    +  +K  D+LP + F L+T+ A  +F+ LL  +E  Q  + PTY  +  L + AR K    KV + GK  + +AL+  E AK+G +D D   + D   PH  Y  +  G  +S  E+  +I DM+K+    + D N              HALIRGLRRGI ++ +EV F  YRR VQ LA  G++AVV SDD+LA+GVNMPFR+CVFCG+M   L  L+AQQM GRAGRRG+D QGN+VY GM    I  LM+G +S++TGK+  PRY  + LQ  LA
Sbjct:  176 LKYARKLVSGKSDLISFQLMEMADRLPPLSRYNRQFRLEKWQCAVLEAIDNRESAVVCAPTSSGKTLLSTYTCKMAKRTLFVLPSEVLVWQVAATYYEFFRGN------VTICTDQIAF---QEITGDAQVYIGTPRALERSLTKARGCAGQEMTKGEREFMILDGGYGQFDYLVLDEVHTLNGPEGDALQRIIKACNCPCLALSATIGNANQLQAWFSRVRNEH-LEAKAIDVPKDDV-------------------------------------------------TLQEFFA-----------------------------------RFINLQRYVVTETEGKDGKKKYKLVKLHPVAAMTPDRLKTQSQLVSALSMTPTDMMDLWKRMRSIFPSTA-LDEMDDPDNFFKGQVDGSMRITLNQTKEYEMRLKTRLAALAESHP-ELYDRLHAAQLPPPLTAKRDIGDMLYGVIKQMKQNDLLPAVAFQLDTYGAFSMFKTLLGRLESEQVSEFPTYRKD--LIRLAREKSAMRKV-AAGKAGRENALEAEEDAKSGFVD-DSLIQEDTTKPHDKYVLSAAGKRLSYAEVEDIIADMKKSG--ERVDVN--------------HALIRGLRRGIAIYTNEVGFSCYRRQVQMLAQKGRIAVVFSDDALAYGVNMPFRSCVFCGDMGDALTPLIAQQMQGRAGRRGMDVQGNVVYVGMDWPYIENLMLGQISHVTGKE--PRYPIMALQHCLA 811          
BLAST of mRNA_D-dudresnayi_contig93.28093.1 vs. uniprot
Match: A0A6V2ICP0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2ICP0_9STRA)

HSP 1 Score: 392 bits (1007), Expect = 1.610e-118
Identity = 277/752 (36.84%), Postives = 393/752 (52.26%), Query Frame = 1
Query:   13 RKIMQSESDMIRLQLVEMSDSLPPLTKFNFGLRLDPWQKRVLAWIDAGKSVVICAPTSSGKTVLSSYN---TSIRVLFVVPTEPLVWQVAAYFTKLLREEGDQDTKVGVVTDHLTYYPPKKFDVMPQIVVGTPFALETALTKPRGLVGKFETNKRAQGDLLPGGFDHFDWAIYDEVHALDGAEGAALQRLIRSMNCKFLALSATVGNAEELRGWMERARGDNILGLEAIDVTEEEVGTSTAGIEKDLQTKATIKTAAAGAHKVRIVKTLTQESRTITLNAEDTLQTLKETIATAWPELLDAATQQTPADGEEVIYVRSFVNMLTHHGRFINLQRYVWNQPTAEAAGVLQTASPL--LAVESVESLRSGVLDNSSLSFTSRDSYRLWEEIKRIYPSDAPILQQLS-PYTFFRA--DE--RITLQRTKDYEDLLKTGLKTLAEQFPVETQELLHAFQIPDPAKEFD-----LCELVLDLKARDMLPCLPFHLNTFEAVRLFQNLLAGIEWRQKRDHPTYYMEQKLEKDARRKEMEAKVKSTGKNDKVSALD--EAAKAGDIDLDQNFEVDEYLPHPSYTFTK-GMPMSELELTTLIDDMEKNDGFAKRDANAMSNLKGKNQGILKHALIRGLRRGIGLFIDEVSFPSYRRAVQRLASTGKLAVVISDDSLAFGVNMPFRTCVFCGEMFGLLDELMAQQMSGRAGRRGLDTQGNLVYAGMRVSRIRRLMIGTVSNITGKDHNPRYESLILQPILA 2214
            RK+M S+SD+I  QL  M D LPPL+++N   +L+ WQ  +L  ID  +S V+CAPTSSGKT+LS+Y     +  VLFV+P+E LVWQ+AA + +  +        V + TD + +   ++     Q+ +GTP ALE A++K RG  G+  T    +  +L GG++ FD+ + DEVH L+G EG ALQR+I+S NC  LALSAT+GNA +L+ W ER R + +                                                                            +A     PA  EEVI       +  H+ RFINLQRYV  + T +   + Q  + L  +A  + + L+      S+LS T  D   LW+ ++ I+PS A  L+++  P  FF++  DE  RITL +TKDYE  LK  L  L++ +P +  E L   Q+P P          L  ++  +K  ++LP + F L+T+ A  +F+ LLA +E  Q  + P Y  +  L K AR K    KV + GK  + +A +  E AK+G  D D   + D   PH  Y  +  G  +S  E+  +I DM+K+               G+N  I  HALIRGLRRG+ ++ +EV F  YRR VQ LA  G++AVV SD +LA+GVNMPFR+C+FCG+M   L  L+AQQM GRAGRRG+D QGN++Y GM    I  LM+G +S + GK   PRY  + LQ  LA
Sbjct:  187 RKLMNSKSDLISFQLTAMHDRLPPLSRYNRQFKLEDWQCAILGAIDERQSAVVCAPTSSGKTLLSTYTCKQANGTVLFVLPSEVLVWQIAATYYEFFKGN------VTICTDQIIF---QEITGGAQVYIGTPSALEIAISKARGCAGQEMTKGEREFMVLDGGYNQFDYLVLDEVHTLNGPEGDALQRIIKSCNCPCLALSATIGNATQLKSWFERLRNERV----------------------------------------------------------------------------EAMVVDAPAKPEEVI-------LKEHYARFINLQRYVVAESTGKDGKIKQKLTKLHPIAAMTPQRLKDSPDLVSALSMTPTDMIDLWKRMRAIFPSTA--LEEMDDPDNFFKSKVDESHRITLNQTKDYETRLKARLTELSQSYP-DLYERLRKAQLPPPLTAMKDVSDHLYGVIDQMKQNELLPVVAFQLDTYGAFNMFKTLLARLESEQVTEFPDYRKD--LIKLAREKAAMRKV-AAGKASRENAAEAEEDAKSGFTD-DLQIQEDTTKPHDKYVLSAAGKRLSYGEVEDIIADMKKS---------------GENVDI-NHALIRGLRRGMAIYTNEVGFSCYRRQVQMLAQKGRIAVVFSDSALAYGVNMPFRSCLFCGDMGDSLTPLIAQQMQGRAGRRGMDVQGNVIYLGMEWPYIENLMLGQISKVDGKQ--PRYPIIALQQALA 821          
BLAST of mRNA_D-dudresnayi_contig93.28093.1 vs. uniprot
Match: A0A448YY16_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YY16_9STRA)

HSP 1 Score: 391 bits (1004), Expect = 3.630e-117
Identity = 288/758 (37.99%), Postives = 401/758 (52.90%), Query Frame = 1
Query:    1 LRKCRKIMQSESDMIRLQLVEMSDSLPPLTKFNFGLRLDPWQKRVLAWIDAGKSVVICAPTSSGKTVLSSY---NTSIRVLFVVPTEPLVWQVAAYFTKLLREEGDQDTKVGVVTDHLTYYPPKKFDVMPQIVVGTPFALETALTKPRGLVGKFETNKRAQGDLLPGGFDHFDWAIYDEVHALDGAEGAALQRLIRSMNCKFLALSATVGNAEELRGWMERARGDNILGLEAIDVTEEEVGTSTAGIEKDLQTKATIKTAAAGAHKVRIVKTLTQESRTITLNAEDTLQTLKETIATAWPELLDAATQQTPADGEEVIYVRSFVNMLTHHGRFINLQRYVWNQPTAEAAGVLQTASPLLAVESVESLRSGVLDN-----SSLSFTSRDSYRLWEEIKRIYPSDAPILQQL-SPYTFFR--ADE--RITLQRTKDYEDLLKTGLKTLAEQFPVETQELLHAFQIPDPAK-----EFDLCELVLDLKARDMLPCLPFHLNTFEAVRLFQNLLAGIEWRQKRDHPTYYMEQKLEKDARRKEMEAKVKSTGKNDKVSALDEA-AKAGDIDLDQNFEVDEYLPHPSYTFTK-GMPMSELELTTLIDDMEKNDGFAKRDANAMSNLKGKNQGILKHALIRGLRRGIGLFIDEVSFPSYRRAVQRLASTGKLAVVISDDSLAFGVNMPFRTCVFCGEMFGLLDELMAQQMSGRAGRRGLDTQGNLVYAGMRVSRIRRLMIGTVSNITGKDHNPRYESLILQPILA 2214
            L+  RK+M  + ++I  QL EM+D LPPL+++N  L+L+PWQ  +L  ID  ++ V+CAPTSSGKT+LS+Y   N +  VLFV+P+E LVWQVA+ + +  +        V V T+ +T+   ++     Q+ VGTP ALE +L K RG+ G   T    +  +L GGF+ FD+ + DEVH L+G EG ALQR+I++ NC  LALSAT+GNA +L+ W                          A ++K+ Q +AT+                                             +DA   +TP D          V +  H  RFINLQRYV  +   +     +T + L  +  V ++ S  L N     SSL+ T  D   LW+ +K ++P+ A  L +L +P  FF    DE  RITL +TK+YE+ LK+ L  L    P E  E L   Q P P K       DL ++V  LK+ D+LP + F LNT+ A  +F+ +LA +E  Q  + PTY  +  L + AR K    KV     N + +A  EA A+AG +D D     D   PH  Y  +  G  ++  E+  +I DM+K+    K D N              HALIRGLRRG  ++ +EV F  YRR VQ LAS G+LAVV SD +LA+GVNMPFR+C+FCG+M   L  L+AQQM GRAGRRG+D QGN++Y GM    I  LM+G +S +TGK+  PR+  L L   LA
Sbjct:  308 LKFARKLMNGKENLISFQLTEMADRLPPLSRYNRKLQLEPWQFDILKAIDDRQTAVVCAPTSSGKTILSTYTCKNANGPVLFVLPSEVLVWQVASLYYQFFKGN------VTVCTEQITF---QEVTGEAQVYVGTPIALERSLCKVRGIAGDEMTKGEREFMILDGGFNQFDYLVLDEVHTLNGPEGDALQRIIKACNCPMLALSATIGNAVQLKDWF-------------------------ASVQKE-QMEATV---------------------------------------------IDAP--ETPPD----------VVLKEHSSRFINLQRYVVTEKEGKDG---KTEAKLTKLHPVAAMTSDRLTNQPELISSLAMTPHDMMTLWKRLKAMFPATA--LDKLDNPDNFFNQYVDESKRITLNQTKEYENRLKSRLTDLCSSHP-ELYEKLRVAQEPPPLKAKTDVSDDLYDVVKQLKSSDLLPAVAFQLNTYGAFDMFKKVLARLESDQVSEFPTYRKD--LIRVAREKAQMRKVAEGKANRENAAEAEADAQAGFVD-DSLVNEDTTRPHEKYVLSPAGKRLNYSEVENIISDMKKSG--EKVDIN--------------HALIRGLRRGXAIYTNEVGFSCYRRQVQMLASQGRLAVVFSDSALAYGVNMPFRSCIFCGDMGDDLTPLIAQQMQGRAGRRGMDVQGNVIYLGMDWPYIENLMLGQISQVTGKE--PRHPLLSLVGALA 946          
BLAST of mRNA_D-dudresnayi_contig93.28093.1 vs. uniprot
Match: A0A1Z5JDF0_FISSO (Helicase ATP-binding domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JDF0_FISSO)

HSP 1 Score: 387 bits (993), Expect = 1.230e-115
Identity = 283/756 (37.43%), Postives = 393/756 (51.98%), Query Frame = 1
Query:    1 LRKCRKIMQSESDMIRLQLVEMSDSLPPLTKFNFGLRLDPWQKRVLAWIDAGKSVVICAPTSSGKTVLSSY---NTSIRVLFVVPTEPLVWQVAAYFTKLLREEGDQDTKVGVVTDHLTYYPPKKFDVMPQIVVGTPFALETALTKPRGLVGKFETNKRAQGDLLPGGFDHFDWAIYDEVHALDGAEGAALQRLIRSMNCKFLALSATVGNAEELRGWMERARGDNILGLEAIDVTEEEVGTSTAGIEKDLQTKATIKTAAAGAHKVRIVKTLTQESRTITLNAEDTLQTLKETIATAWPELLDAATQQTPADGEEVIYVRSFVNMLTHHGRFINLQRYVWNQPTAEAAGVLQTASPL--LAVESVESLRSGVLDNSSLSFTSRDSYRLWEEIKRIYPSDAPILQQLS-PYTFF--RADE--RITLQRTKDYEDLLKTGLKTLAEQFPVETQELLHAFQIPDP-AKEFDLCELVL----DLKARDMLPCLPFHLNTFEAVRLFQNLLAGIEWRQKRDHPTYYMEQKLEKDARRKEMEAKVKSTGKNDKVSALD--EAAKAGDIDLDQNFEVDEYLPHPSYTFTK-GMPMSELELTTLIDDMEKNDGFAKRDANAMSNLKGKNQGILKHALIRGLRRGIGLFIDEVSFPSYRRAVQRLASTGKLAVVISDDSLAFGVNMPFRTCVFCGEMFGLLDELMAQQMSGRAGRRGLDTQGNLVYAGMRVSRIRRLMIGTVSNITGKDHNPRYESLILQPILA 2214
            L+  RKIM S+  +I  QL +M D LPPL+K+N   +L+ WQ  VL  ID  KS V+CAPTSSGKT+LS+Y   N    VLFV+P+E LVWQVA+ + +  +        V V TD +T+   ++     Q+ +GTP ALE +L+K RG  G+  T    +  +L GG++ F++ + DEVH L+G EG ALQR+I++ NC  LALSAT+GNA +L+ W E  R  ++                                                                                + T  DG     V++ V +  H  RFINLQRYV  +   +   V +    L  LA  + + LR       SLS T  D   LW+ ++ I+PS   +L++L  P  FF  R  E  R+TL +TKDYE  LK  L  L++  P +    L   Q+P P   + D+ + +      LK  D+LP + F LNT+ A  +F+ LLA +E  Q  + P Y  +  L K AR K    KV + GK  + +A +  E AKAG +D +   + D   PH  Y +   G  +S  E+ ++I DM+K                G+N  +  HALIRGLRRGI ++ +E+ F  YRR VQ LA  G+LAVV SDD+LA+GVNMPFR+C+FCG+M   L  L+AQQM GRAGRRGLD QGN++Y GM    I  LM+G +S +TGK+  PRY ++ LQ  LA
Sbjct:  300 LKYARKIMNSKESLISFQLTDMPDRLPPLSKYNRRFQLEDWQCNVLEAIDERKSAVVCAPTSSGKTLLSTYTCKNAKGTVLFVLPSEVLVWQVASTYYQFFKGN------VTVCTDLITF---QEVTGEAQVYIGTPKALEKSLSKVRGAAGEEMTKGEREFMVLDGGYNQFEYLVLDEVHTLNGPEGDALQRIIKACNCPVLALSATIGNATKLKDWFESVRQQHL--------------------------------------------------------------------------------EATVIDGP----VKADVLLTEHFARFINLQRYVAVEAEGKDGKVKEKLVKLHPLAAMTPDRLREQPELIESLSMTPTDLMDLWKRMRAIFPST--VLEELDDPDNFFAQRVSESKRVTLGQTKDYEVHLKKRLTQLSQSHP-DLYARLQKAQLPPPLTAKTDVSDTIYGVVDQLKQSDLLPAVAFQLNTYGAFNMFKTLLARLESEQMIEFPNYRKD--LIKVAREKAHMRKV-AAGKASRENAAEAEEEAKAGFVD-ESLIQEDTTKPHDKYVYAAAGKRLSYNEIESIIADMKK---------------AGENVDV-NHALIRGLRRGIAIYTNEIGFSCYRRQVQMLAQKGRLAVVFSDDALAYGVNMPFRSCIFCGDMGDDLTPLIAQQMQGRAGRRGLDVQGNIIYLGMDWPYIENLMLGQISIVTGKE--PRYPTMCLQQALA 937          
BLAST of mRNA_D-dudresnayi_contig93.28093.1 vs. uniprot
Match: B7G3A5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G3A5_PHATC)

HSP 1 Score: 385 bits (990), Expect = 3.730e-115
Identity = 281/758 (37.07%), Postives = 388/758 (51.19%), Query Frame = 1
Query:    1 LRKCRKIMQSESDMIRLQLVEMSDSLPPLTKFNFGLRLDPWQKRVLAWIDAGKSVVICAPTSSGKTVLSSY---NTSIRVLFVVPTEPLVWQVAAYFTKLLREEGDQDTKVGVVTDHLTYYPPKKFDVMPQIVVGTPFALETALTKPRGLVGKFETNKRAQGDLLPGGFDHFDWAIYDEVHALDGAEGAALQRLIRSMNCKFLALSATVGNAEELRGWMERARGDNILGLEAIDVTEEEVGTSTAGIEKDLQTKATIKTAAAGAHKVRIVKTLTQESRTITLNAEDTLQTLKETIATAWPELLDAATQQTPADGEEVIYVRSFVNMLTHHGRFINLQRYVWNQPTAEAAGVL-QTASPLLAVESVESLRSGVLDNS-----SLSFTSRDSYRLWEEIKRIYPSDAPILQQLS-PYTFFR--ADE--RITLQRTKDYEDLLKTGLKTLAEQFPVETQELLHAFQIPDP--AKEF---DLCELVLDLKARDMLPCLPFHLNTFEAVRLFQNLLAGIEWRQKRDHPTYYMEQKLEKDARRKEMEAKVKSTGKNDKVSALDEAAKAGDIDLDQNFEVDEYLPHPSYTFTK-GMPMSELELTTLIDDMEKNDGFAKRDANAMSNLKGKNQGILKHALIRGLRRGIGLFIDEVSFPSYRRAVQRLASTGKLAVVISDDSLAFGVNMPFRTCVFCGEMFGLLDELMAQQMSGRAGRRGLDTQGNLVYAGMRVSRIRRLMIGTVSNITGKDHNPRYESLILQPILA 2214
            L+  R ++  +  +I  QL+EM D LPPL+++N   +L+ WQ  +L  ID  +S V+CAPTSSGKT+LS+Y   N    VLFV+P+E LVWQVA+ + +  +        V V TD +T+   ++     Q+ +GTP ALE +++K RG+ G+  T    +  +L GG+  FD+ + DEVH L+G EG ALQR+I++ NC  LALSAT+GNA +LR W    R D+I  L A+DV                                                                           P   EEVI       +  H  RFINLQRYV     AEA G   +    L+ +  V ++    L N       LS T  D   LW+ ++ I+PS   +L+ L  P  FF    DE  R+TL +TK+YE  LKT L  LAE  P E  E L   Q+P P  AKE     L  ++  LK  ++LP + F LNT+ A  +F+ LL  +E  Q  + P+Y  +  +E+  +  +M          +  +  +E AK G +D +   + D   PH  Y     G  +   E+  +I DM+K+    + D N              HALIRGLRRGI ++ +EV F  YRR VQ LA  G+LAVV SDD+LA+GVNMPFRTC+FCG+M   L  L+AQQM GRAGRRGLD QGN++Y GM    I  LM+G +S +TGK+  PRY  ++LQ  LA
Sbjct:  311 LKYARGLLNGKESLISFQLMEMPDRLPPLSRYNRQFKLEDWQCDILQAIDDRQSAVVCAPTSSGKTLLSTYTCKNAKGTVLFVLPSEVLVWQVASTYYQFFKGN------VTVCTDQITF---QEVTGDAQVYIGTPKALERSISKVRGVAGEEMTKGEREFMVLDGGYHQFDYLVLDEVHTLNGPEGDALQRIIKACNCPVLALSATIGNANQLRNWFSTVRNDHIDAL-AVDV---------------------------------------------------------------------------PEKPEEVI-------LKEHFARFINLQRYV----IAEAEGKDGKLKQKLVKLHPVAAMTPDRLKNQPELIGGLSMTPSDLMDLWKRMRAIFPST--VLEDLDDPDKFFAQYVDESKRVTLNQTKEYETRLKTRLAVLAESHP-ELFERLRKAQLPPPLTAKEDVSDTLYGILEQLKQSELLPAVAFQLNTYGAFNMFKTLLHRLESEQVAEFPSYRRDL-IERAKKNAQMRKVAAGKASRENAAEAEEEAKQGFVD-ESLLQEDTTKPHDKYVLAAAGKRLGYNEVEDIIADMKKSG--ERVDIN--------------HALIRGLRRGIAIYTNEVGFSCYRRQVQMLAQKGRLAVVFSDDALAYGVNMPFRTCIFCGDMGDALTPLIAQQMQGRAGRRGLDVQGNILYLGMDWPYIENLMLGQISQVTGKE--PRYPLIVLQQALA 949          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig93.28093.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3HIV9_9STRA2.350e-22874.63Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A836CAV0_9STRA3.680e-14140.43P-loop containing nucleoside triphosphate hydrolas... [more]
D7FZQ4_ECTSI1.000e-14040.88Helicase ATP-binding domain-containing protein n=2... [more]
A0A7S3HIE8_9STRA4.550e-13485.37Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A4D9CYE4_9STRA3.970e-13038.88Helicase ATP-binding domain-containing protein n=2... [more]
A0A7S1ZG66_TRICV8.980e-12237.93Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6V2ICP0_9STRA1.610e-11836.84Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A448YY16_9STRA3.630e-11737.99Helicase ATP-binding domain-containing protein n=1... [more]
A0A1Z5JDF0_FISSO1.230e-11537.43Helicase ATP-binding domain-containing protein n=2... [more]
B7G3A5_PHATC3.730e-11537.07Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig93contigD-dudresnayi_contig93:5914..8758 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score464.5
Seed ortholog evalue8.9e-128
Seed eggNOG ortholog2880.D7FZQ4
Preferred nameDDX60
KEGG koko:K20103
GOsGO:0001817,GO:0001819,GO:0002682,GO:0002684,GO:0002697,GO:0002699,GO:0002831,GO:0002833,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003725,GO:0003727,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0008150,GO:0009605,GO:0009607,GO:0009615,GO:0009966,GO:0009967,GO:0010646,GO:0010647,GO:0023051,GO:0023056,GO:0031347,GO:0031349,GO:0032101,GO:0032103,GO:0039531,GO:0039533,GO:0039535,GO:0043207,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043900,GO:0043902,GO:0044424,GO:0044444,GO:0044464,GO:0045088,GO:0045089,GO:0045111,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050688,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050896,GO:0051239,GO:0051240,GO:0051704,GO:0051707,GO:0065007,GO:0080134,GO:0097159,GO:1900245,GO:1900246,GO:1901363,GO:1902531,GO:1902533
EggNOG free text desc.helicase activity
EggNOG OGsCOG4581@1,KOG0949@2759
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03019
Hectar predicted targeting categoryother localisation
Exons4
Model size2214
Cds size2193
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig93.28093.1prot_D-dudresnayi_contig93.28093.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig93 5935..8758 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930868.679653-UTR-D-dudresnayi_contig93:5913..59341622930868.679653-UTR-D-dudresnayi_contig93:5913..5934Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig93 5914..5934 +
1690557946.4252326-UTR-D-dudresnayi_contig93:5913..59341690557946.4252326-UTR-D-dudresnayi_contig93:5913..5934Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig93 5914..5934 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930868.694568-CDS-D-dudresnayi_contig93:5934..61261622930868.694568-CDS-D-dudresnayi_contig93:5934..6126Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig93 5935..6126 +
1690557946.4366019-CDS-D-dudresnayi_contig93:5934..61261690557946.4366019-CDS-D-dudresnayi_contig93:5934..6126Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig93 5935..6126 +
1622930868.7161596-CDS-D-dudresnayi_contig93:6513..72181622930868.7161596-CDS-D-dudresnayi_contig93:6513..7218Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig93 6514..7218 +
1690557946.446833-CDS-D-dudresnayi_contig93:6513..72181690557946.446833-CDS-D-dudresnayi_contig93:6513..7218Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig93 6514..7218 +
1622930868.7325282-CDS-D-dudresnayi_contig93:7341..80281622930868.7325282-CDS-D-dudresnayi_contig93:7341..8028Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig93 7342..8028 +
1690557946.4570806-CDS-D-dudresnayi_contig93:7341..80281690557946.4570806-CDS-D-dudresnayi_contig93:7341..8028Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig93 7342..8028 +
1622930868.7566535-CDS-D-dudresnayi_contig93:8149..87581622930868.7566535-CDS-D-dudresnayi_contig93:8149..8758Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig93 8150..8758 +
1690557946.4671726-CDS-D-dudresnayi_contig93:8149..87581690557946.4671726-CDS-D-dudresnayi_contig93:8149..8758Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig93 8150..8758 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig93.28093.1

>prot_D-dudresnayi_contig93.28093.1 ID=prot_D-dudresnayi_contig93.28093.1|Name=mRNA_D-dudresnayi_contig93.28093.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=731bp
MQSESDMIRLQLVEMSDSLPPLTKFNFGLRLDPWQKRVLAWIDAGKSVVI
CAPTSSGKTVLSSYNTSIRVLFVVPTEPLVWQVAAYFTKLLREEGDQDTK
VGVVTDHLTYYPPKKFDVMPQIVVGTPFALETALTKPRGLVGKFETNKRA
QGDLLPGGFDHFDWAIYDEVHALDGAEGAALQRLIRSMNCKFLALSATVG
NAEELRGWMERARGDNILGLEAIDVTEEEVGTSTAGIEKDLQTKATIKTA
AAGAHKVRIVKTLTQESRTITLNAEDTLQTLKETIATAWPELLDAATQQT
PADGEEVIYVRSFVNMLTHHGRFINLQRYVWNQPTAEAAGVLQTASPLLA
VESVESLRSGVLDNSSLSFTSRDSYRLWEEIKRIYPSDAPILQQLSPYTF
FRADERITLQRTKDYEDLLKTGLKTLAEQFPVETQELLHAFQIPDPAKEF
DLCELVLDLKARDMLPCLPFHLNTFEAVRLFQNLLAGIEWRQKRDHPTYY
MEQKLEKDARRKEMEAKVKSTGKNDKVSALDEAAKAGDIDLDQNFEVDEY
LPHPSYTFTKGMPMSELELTTLIDDMEKNDGFAKRDANAMSNLKGKNQGI
LKHALIRGLRRGIGLFIDEVSFPSYRRAVQRLASTGKLAVVISDDSLAFG
VNMPFRTCVFCGEMFGLLDELMAQQMSGRAGRRGLDTQGNLVYAGMRVSR
IRRLMIGTVSNITGKDHNPRYESLILQPILA
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mRNA from alignment at D-dudresnayi_contig93:5914..8758+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig93.28093.1 ID=mRNA_D-dudresnayi_contig93.28093.1|Name=mRNA_D-dudresnayi_contig93.28093.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=2845bp|location=Sequence derived from alignment at D-dudresnayi_contig93:5914..8758+ (Desmarestia dudresnayi DdudBR16 monoicous)
TTACGTAAATGTCGTAAGATAATGCAATCAGAGAGCGACATGATCCGACT GCAGTTAGTTGAGATGAGTGACTCCTTACCTCCGTTAACGAAGTTTAACT TTGGTCTACGCTTAGATCCTTGGCAAAAACGAGTGTTAGCGTGGATTGAT GCCGGCAAATCTGTGGTGATTTGTGCTCCCACGAGTTCAGGAAAGACTGT GCTGTCCTCCTATGTCGCTATTATCTTCAAGTCTCACATTACTGTGGATC CTGATGCCCCTGAGAGTGAGAAGAATAAGACTAATAGTGCTCTGTTGAAG TCTGCTGGGCGTGGTGAGAAAGCCTCGTCTTTACCCCCCTGGGAAGAGGA GGGTGAGGGTGGTGGAGGATCAGATGAGGAGCACTCGGATGACGATGGTG AGGAGTTCCAGGATGGCGGAGACTATGACGACGAGGAAGAGGAGGAGGAA GAAGAGCAGCATAGTGCTGAGATGGAGCAGACTGCGATGGAAGAGACGGG GGAAGCACTGGCTCGTCGGTTGGTGAGACAAGACCGTATGAACCGCAGTG CCTTCCTGGCGGAAAAGACCAGACTAGCGAATAGCGGTGGTGTGGCAGAG AACACCTCTATTCGTGTGTTATTCGTTGTGCCCACTGAGCCCCTGGTATG GCAGGTGGCAGCATACTTCACTAAGCTGCTACGTGAGGAAGGTGATCAGG ACACGAAAGTGGGTGTGGTCACTGATCATCTTACTTACTACCCCCCTAAG AAGTTCGACGTGATGCCCCAGATTGTGGTGGGCACTCCCTTCGCACTAGA GACTGCGCTCACCAAGCCCAGAGGTCTAGTGGGTAAATTCGAGACGAACA AGCGCGCTCAGGGTGATCTGCTGCCCGGAGGCTTCGATCATTTCGACTGG GCCATCTACGATGAGGTGCATGCGCTGGATGGGGCAGAGGGAGCGGCACT GCAGCGTTTGATTCGCTCTATGAACTGTAAGTTCCTTGCACTATCCGCTA CTGTCGGGAATGCGGAGGAGCTGCGAGGCTGGATGGAGCGGGCCAGAGGC GATAATATCCTGGGTCTCGAGGCCATTGATGTGACCGAGGAGGAAGTCGG TACTAGCACTGCAGGCATTGAAAAGGATCTGCAGACCAAGGCTACTATCA AGACTGCTGCCGCAGGAGCTCATAAAGTGCGCATAGTGAAGACTCTAACT CAAGAGAGTCGCACTATCACGCTGAATGCTGAGGACACCCTGCAGACCTT GAAGGAAACTATTGCTACTGCATGGCCTGAACTGCTGGATGCCGCCACTC AACAGGTGCCACATACACGGAATCTGCTGCAGATGCTTTGGAAGGATAAA GATCTGGTTGAAGATACCATTAACGGCGCACCACGGGGACCTTCACGCAG TCTAGCTAGTTTTGGCCTGTTCCAAGAGACCCCTGCCGATGGCGAGGAAG TGATCTATGTGCGGTCTTTTGTCAACATGTTGACTCACCACGGTCGCTTT ATTAACCTGCAGCGCTATGTATGGAACCAGCCCACTGCTGAAGCTGCAGG TGTACTGCAGACTGCGAGTCCACTGCTAGCAGTAGAATCCGTGGAGTCCC TCCGCTCTGGTGTGCTGGACAACTCCAGTCTGTCCTTCACTTCTCGGGAT AGCTACCGCCTGTGGGAAGAAATTAAGCGCATCTATCCATCGGATGCACC CATCCTGCAGCAGCTGAGTCCCTACACGTTCTTCCGTGCAGATGAGCGCA TTACTCTGCAGCGCACTAAGGACTACGAGGATCTACTGAAGACTGGCTTG AAGACCCTGGCCGAGCAGTTCCCAGTGGAGACCCAGGAGCTACTCCACGC CTTCCAGATCCCCGATCCTGCCAAGGAATTCGACCTCTGCGAGCTAGTTC TGGACCTCAAGGCGAGGGATATGTTGCCTTGCCTACCATTCCACCTGAAT ACCTTCGAAGCAGTGAGACTCTTCCAGAACCTACTCGCTGGTATTGAGTG GAGGCAGAAGCGCGACCACCCCACCTACTACATGGAGCAGAAGCTGGAGA AGGACGCCAGGAGGAAGGAGATGGAGGCCAAGGTCAAGTCCACTGGCAAG AACGACAAGGTGAGTGTGTGATGGGTTATACTCTACTATGCCATGCTTAT GTTCCTTATTATTATATTATACTGGTTTGCATTTACTTATTATATATGTC ACTACTCACTATATATATGGACTTCTACTATACTAGGCTCTGGACGAAGC CGCCAAGGCCGGAGACATCGACCTCGACCAGAACTTCGAGGTGGACGAGT ACCTGCCCCACCCCAGCTACACCTTCACCAAGGGCATGCCCATGTCCGAG CTGGAGCTCACCACCCTCATCGATGATATGGAGAAGAACGATGGATTCGC CAAGCGTGATGCCAATGCGATGAGCAATCTTAAGGGCAAAAACCAGGGTA TTCTGAAACACGCACTGATTCGTGGTCTGCGCAGAGGCATCGGACTCTTT ATTGATGAAGTCAGTTTCCCTTCTTATCGCCGTGCTGTCCAGCGTCTCGC TTCTACTGGCAAGCTAGCCGTCGTTATCTCTGATGATTCCCTAGCTTTTG GTGTGAACATGCCTTTCCGTACCTGTGTGTTCTGCGGTGAGATGTTTGGG TTACTTGATGAGCTCATGGCACAACAGATGTCCGGACGTGCTGGACGTCG TGGTTTAGATACTCAGGGTAACCTGGTCTATGCAGGCATGCGCGTGTCTC GTATCCGTCGTCTGATGATCGGTACCGTGTCGAATATCACCGGCAAGGAC CACAATCCTCGGTACGAGTCCCTGATCCTACAGCCTATCCTCGCC
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Coding sequence (CDS) from alignment at D-dudresnayi_contig93:5914..8758+

>mRNA_D-dudresnayi_contig93.28093.1 ID=mRNA_D-dudresnayi_contig93.28093.1|Name=mRNA_D-dudresnayi_contig93.28093.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=4386bp|location=Sequence derived from alignment at D-dudresnayi_contig93:5914..8758+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGCAATCAGAGAGCGACATGATCCGACTGCAGTTAGTTGAGATGAGTGA
CTCCTTACCTCCGTTAACGAAGTTTAACTTTGGTCTACGCTTAGATCCTT
GGCAAAAACGAGTGTTAGCGTGGATTGATGCCGGCAAATCTGTGGTGATT
TGTGCTCCCACGAGTTCAGGAAAGACTGTGCTGTCCTCCTATATGCAATC
AGAGAGCGACATGATCCGACTGCAGTTAGTTGAGATGAGTGACTCCTTAC
CTCCGTTAACGAAGTTTAACTTTGGTCTACGCTTAGATCCTTGGCAAAAA
CGAGTGTTAGCGTGGATTGATGCCGGCAAATCTGTGGTGATTTGTGCTCC
CACGAGTTCAGGAAAGACTGTGCTGTCCTCCTATAACACCTCTATTCGTG
TGTTATTCGTTGTGCCCACTGAGCCCCTGGTATGGCAGGTGGCAGCATAC
TTCACTAAGCTGCTACGTGAGGAAGGTGATCAGGACACGAAAGTGGGTGT
GGTCACTGATCATCTTACTTACTACCCCCCTAAGAAGTTCGACGTGATGC
CCCAGATTGTGGTGGGCACTCCCTTCGCACTAGAGACTGCGCTCACCAAG
CCCAGAGGTCTAGTGGGTAAATTCGAGACGAACAAGCGCGCTCAGGGTGA
TCTGCTGCCCGGAGGCTTCGATCATTTCGACTGGGCCATCTACGATGAGG
TGCATGCGCTGGATGGGGCAGAGGGAGCGGCACTGCAGCGTTTGATTCGC
TCTATGAACTGTAAGTTCCTTGCACTATCCGCTACTGTCGGGAATGCGGA
GGAGCTGCGAGGCTGGATGGAGCGGGCCAGAGGCGATAATATCCTGGGTC
TCGAGGCCATTGATGTGACCGAGGAGGAAGTCGGTACTAGCACTGCAGGC
ATTGAAAAGGATCTGCAGACCAAGGCTACTATCAAGACTGCTGCCGCAGG
AGCTCATAAAGTGCGCATAGTGAAGACTCTAACTCAAGAGAGTCGCACTA
TCACGCTGAATGCTGAGGACACCCTGCAGACCTTGAAGGAAACTATTGCT
ACTGCATGGCCTGAACTGCTGGATGCCGCCACTCAACAGAACACCTCTAT
TCGTGTGTTATTCGTTGTGCCCACTGAGCCCCTGGTATGGCAGGTGGCAG
CATACTTCACTAAGCTGCTACGTGAGGAAGGTGATCAGGACACGAAAGTG
GGTGTGGTCACTGATCATCTTACTTACTACCCCCCTAAGAAGTTCGACGT
GATGCCCCAGATTGTGGTGGGCACTCCCTTCGCACTAGAGACTGCGCTCA
CCAAGCCCAGAGGTCTAGTGGGTAAATTCGAGACGAACAAGCGCGCTCAG
GGTGATCTGCTGCCCGGAGGCTTCGATCATTTCGACTGGGCCATCTACGA
TGAGGTGCATGCGCTGGATGGGGCAGAGGGAGCGGCACTGCAGCGTTTGA
TTCGCTCTATGAACTGTAAGTTCCTTGCACTATCCGCTACTGTCGGGAAT
GCGGAGGAGCTGCGAGGCTGGATGGAGCGGGCCAGAGGCGATAATATCCT
GGGTCTCGAGGCCATTGATGTGACCGAGGAGGAAGTCGGTACTAGCACTG
CAGGCATTGAAAAGGATCTGCAGACCAAGGCTACTATCAAGACTGCTGCC
GCAGGAGCTCATAAAGTGCGCATAGTGAAGACTCTAACTCAAGAGAGTCG
CACTATCACGCTGAATGCTGAGGACACCCTGCAGACCTTGAAGGAAACTA
TTGCTACTGCATGGCCTGAACTGCTGGATGCCGCCACTCAACAGACCCCT
GCCGATGGCGAGGAAGTGATCTATGTGCGGTCTTTTGTCAACATGTTGAC
TCACCACGGTCGCTTTATTAACCTGCAGCGCTATGTATGGAACCAGCCCA
CTGCTGAAGCTGCAGGTGTACTGCAGACTGCGAGTCCACTGCTAGCAGTA
GAATCCGTGGAGTCCCTCCGCTCTGGTGTGCTGGACAACTCCAGTCTGTC
CTTCACTTCTCGGGATAGCTACCGCCTGTGGGAAGAAATTAAGCGCATCT
ATCCATCGGATGCACCCATCCTGCAGCAGCTGAGTCCCTACACGTTCTTC
CGTGCAGATGAGCGCATTACTCTGCAGCGCACTAAGGACTACGAGGATCT
ACTGAAGACTGGCTTGAAGACCCTGGCCGAGCAGTTCCCAGTGGAGACCC
AGGAGCTACTCCACGCCTTCCAGATCCCCGATCCTGCCAAGGAATTCGAC
CTCTGCGAGCTAGTTCTGGACCTCAAGGCGAGGGATATGTTGCCTTGCCT
ACCATTCCACCTGAATACCTTCGAAGCAGTGAGACTCTTCCAGAACCTAC
TCGCTGGTATTGAGTGGAGGCAGAAGCGCGACCACCCCACCTACTACATG
GAGCAGAAGCTGGAGAAGGACGCCAGGAGGAAGGAGATGGAGGCCAAGGT
CAAGTCCACTGGCAAGAACGACAAGGTGAGTACCCCTGCCGATGGCGAGG
AAGTGATCTATGTGCGGTCTTTTGTCAACATGTTGACTCACCACGGTCGC
TTTATTAACCTGCAGCGCTATGTATGGAACCAGCCCACTGCTGAAGCTGC
AGGTGTACTGCAGACTGCGAGTCCACTGCTAGCAGTAGAATCCGTGGAGT
CCCTCCGCTCTGGTGTGCTGGACAACTCCAGTCTGTCCTTCACTTCTCGG
GATAGCTACCGCCTGTGGGAAGAAATTAAGCGCATCTATCCATCGGATGC
ACCCATCCTGCAGCAGCTGAGTCCCTACACGTTCTTCCGTGCAGATGAGC
GCATTACTCTGCAGCGCACTAAGGACTACGAGGATCTACTGAAGACTGGC
TTGAAGACCCTGGCCGAGCAGTTCCCAGTGGAGACCCAGGAGCTACTCCA
CGCCTTCCAGATCCCCGATCCTGCCAAGGAATTCGACCTCTGCGAGCTAG
TTCTGGACCTCAAGGCGAGGGATATGTTGCCTTGCCTACCATTCCACCTG
AATACCTTCGAAGCAGTGAGACTCTTCCAGAACCTACTCGCTGGTATTGA
GTGGAGGCAGAAGCGCGACCACCCCACCTACTACATGGAGCAGAAGCTGG
AGAAGGACGCCAGGAGGAAGGAGATGGAGGCCAAGGTCAAGTCCACTGGC
AAGAACGACAAGGTGAGTGCTCTGGACGAAGCCGCCAAGGCCGGAGACAT
CGACCTCGACCAGAACTTCGAGGTGGACGAGTACCTGCCCCACCCCAGCT
ACACCTTCACCAAGGGCATGCCCATGTCCGAGCTGGAGCTCACCACCCTC
ATCGATGATATGGAGAAGAACGATGGATTCGCCAAGCGTGATGCCAATGC
GATGAGCAATCTTAAGGGCAAAAACCAGGGTATTCTGAAACACGCACTGA
TTCGTGGTCTGCGCAGAGGCATCGGACTCTTTATTGATGAAGTCAGTTTC
CCTTCTTATCGCCGTGCTGTCCAGCGTCTCGCTTCTACTGGCAAGCTAGC
CGTCGTTATCTCTGATGATTCCCTAGCTTTTGGTGTGAACATGCCTTTCC
GTACCTGTGTGTTCTGCGGTGAGATGTTTGGGTTACTTGATGAGCTCATG
GCACAACAGATGTCCGGACGTGCTGGACGTCGTGGTTTAGATACTCAGGG
TAACCTGGTCTATGCAGGCATGCGCGTGTCTCGTATCCGTCGTCTGATGA
TCGGTACCGTGTCGAATATCACCGGCAAGGACCACAATCCTCGGTACGAG
TCCCTGATCCTACAGCCTATCCTCGCCGCTCTGGACGAAGCCGCCAAGGC
CGGAGACATCGACCTCGACCAGAACTTCGAGGTGGACGAGTACCTGCCCC
ACCCCAGCTACACCTTCACCAAGGGCATGCCCATGTCCGAGCTGGAGCTC
ACCACCCTCATCGATGATATGGAGAAGAACGATGGATTCGCCAAGCGTGA
TGCCAATGCGATGAGCAATCTTAAGGGCAAAAACCAGGGTATTCTGAAAC
ACGCACTGATTCGTGGTCTGCGCAGAGGCATCGGACTCTTTATTGATGAA
GTCAGTTTCCCTTCTTATCGCCGTGCTGTCCAGCGTCTCGCTTCTACTGG
CAAGCTAGCCGTCGTTATCTCTGATGATTCCCTAGCTTTTGGTGTGAACA
TGCCTTTCCGTACCTGTGTGTTCTGCGGTGAGATGTTTGGGTTACTTGAT
GAGCTCATGGCACAACAGATGTCCGGACGTGCTGGACGTCGTGGTTTAGA
TACTCAGGGTAACCTGGTCTATGCAGGCATGCGCGTGTCTCGTATCCGTC
GTCTGATGATCGGTACCGTGTCGAATATCACCGGCAAGGACCACAATCCT
CGGTACGAGTCCCTGATCCTACAGCCTATCCTCGCC
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