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Homology
BLAST of mRNA_D-dudresnayi_contig9273.28061.1 vs. uniprot
Match: D8LQY8_ECTSI (SCP-domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY8_ECTSI) HSP 1 Score: 110 bits (274), Expect = 1.290e-26 Identity = 62/166 (37.35%), Postives = 84/166 (50.60%), Query Frame = 1
Query: 1 QCWCGLSNSLGDYDRHGEGTCRTPCKGNKAIACGGYDAFDLFFYR---GDGSGGXXXXXXXXETPASPAPDADSFDDLLELHNHVRCVHGADPLKMDKGVATSAQAYAKTLASDDECGAATAPHSTGLGENVFICAINNEKE-------SCYSAEAAMNEFCELTI 468
+CWC L + DY G G C T C G+ + CGG D FY+ G+ + G P D LLELHN RC+H PL+ + VA +A+ YA LAS+ CG+A HSTGLGENVF+CA ++ +C+S E+AM F + +
Sbjct: 34 RCWCSLESHF-DYSSGGVGVCDTWCGGDGSTTCGGSDGLSRDFYKIETGEATLGVSAAGDGVSNSGDP------LDRLLELHNAARCMHATGPLEFAEPVAATAKTYADLLASESMCGSAETAHSTGLGENVFVCAASSSLSGDGAPTAACFSPESAMEAFYDSQV 192
BLAST of mRNA_D-dudresnayi_contig9273.28061.1 vs. uniprot
Match: A0A6H5KE93_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE93_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 1.260e-22 Identity = 62/167 (37.13%), Postives = 83/167 (49.70%), Query Frame = 1
Query: 4 CWCGLSNSLGD--YDRHGEGTCRTPCKGNKAIACGGYDAFDLFFYR---GDGSGGXXXXXXXXETPASPAPDADSFDDLLELHNHVRCVHGADPLKMDKGVATSAQAYAKTLASDDECGAATAPHSTGLGENVFICAINNE-------KESCYSAEAAMNEFCELTI 468
C G S+ L Y G G C T C G+ + CGG D +Y+ G+ + G A P D LLELHN RC+H PL+ + VA +A+ YA LAS+ CG+A A HSTGLGENVF+CA ++ +C+S E AM F + +
Sbjct: 15 CLSGGSSGLHKILYVWGGVGVCDTWCGGDGSTTCGGSDGLSRDYYKIETGEATLGVSAAGDGASNSADP------LDRLLELHNAARCMHATGPLEFAEPVAATAKTYADVLASESMCGSAEAAHSTGLGENVFVCAASSSFSGNGAPTSACFSPEIAMEAFYDSQV 175
BLAST of mRNA_D-dudresnayi_contig9273.28061.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI) HSP 1 Score: 66.6 bits (161), Expect = 7.970e-10 Identity = 25/46 (54.35%), Postives = 33/46 (71.74%), Query Frame = 1
Query: 1 QCWCGLSNSLGDYDRHGEGTCRTPCKGNKAIACGGYDAFDLFFYRG 138
+CWCG+SN DY RHG G+C C G+ +ACGG+DAF+LF + G
Sbjct: 581 ECWCGMSNDEEDYKRHGRGSCLAGCSGDPTVACGGFDAFNLFKFDG 626
BLAST of mRNA_D-dudresnayi_contig9273.28061.1 vs. uniprot
Match: D7FXK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK6_ECTSI) HSP 1 Score: 61.6 bits (148), Expect = 4.050e-8 Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 1
Query: 1 QCWCGLSNSLGDYDRHGEGTCRTPCKGNKAIACGGYDAFDLFFYRGD 141
+CWCG ++ + +Y RHG+G C C G+ AIACGGY AF LF Y D
Sbjct: 468 ECWCGATDDVEEYKRHGDGECIAGCFGDPAIACGGYYAFSLFEYLDD 514
BLAST of mRNA_D-dudresnayi_contig9273.28061.1 vs. uniprot
Match: D8LED9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED9_ECTSI) HSP 1 Score: 60.5 bits (145), Expect = 1.020e-7 Identity = 23/46 (50.00%), Postives = 32/46 (69.57%), Query Frame = 1
Query: 1 QCWCGLSNSLGDYDRHGEGTCRTPCKGNKAIACGGYDAFDLFFYRG 138
+CWCG+S DY R G G+C C G+ A+ACGG++AF+LF + G
Sbjct: 548 ECWCGMSEEEEDYTRSGRGSCLAGCSGDPAVACGGFNAFNLFKFGG 593
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 90.9 |
| Seed ortholog evalue | 5.8e-16 |
| Seed eggNOG ortholog | 2880.D8LED1 |
| EggNOG free text desc. | peptidase inhibitor activity |
| EggNOG OGs | COG2340@1,KOG3017@2759 |
| COG Functional cat. | ADK |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | SCP / PR1-domain containing protein |
| Ec32 ortholog | Ec-07_002140.1 |
| Exons | 3 |
| Model size | 477 |
| Cds size | 477 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930864.9321337-CDS-D-dudresnayi_contig9273:7755..8003 | 1622930864.9321337-CDS-D-dudresnayi_contig9273:7755..8003 | Desmarestia dudresnayi DdudBR16 monoicous | CDS | D-dudresnayi_contig9273 7756..8003 + |
| 1690557945.0168674-CDS-D-dudresnayi_contig9273:7755..8003 | 1690557945.0168674-CDS-D-dudresnayi_contig9273:7755..8003 | Desmarestia dudresnayi DdudBR16 monoicous | CDS | D-dudresnayi_contig9273 7756..8003 + |
| 1622930864.9579723-CDS-D-dudresnayi_contig9273:10403..10461 | 1622930864.9579723-CDS-D-dudresnayi_contig9273:10403..10461 | Desmarestia dudresnayi DdudBR16 monoicous | CDS | D-dudresnayi_contig9273 10404..10461 + |
| 1690557945.0303817-CDS-D-dudresnayi_contig9273:10403..10461 | 1690557945.0303817-CDS-D-dudresnayi_contig9273:10403..10461 | Desmarestia dudresnayi DdudBR16 monoicous | CDS | D-dudresnayi_contig9273 10404..10461 + |
| 1622930864.9726713-CDS-D-dudresnayi_contig9273:11417..11588 | 1622930864.9726713-CDS-D-dudresnayi_contig9273:11417..11588 | Desmarestia dudresnayi DdudBR16 monoicous | CDS | D-dudresnayi_contig9273 11418..11588 + |
| 1690557945.0490942-CDS-D-dudresnayi_contig9273:11417..11588 | 1690557945.0490942-CDS-D-dudresnayi_contig9273:11417..11588 | Desmarestia dudresnayi DdudBR16 monoicous | CDS | D-dudresnayi_contig9273 11418..11588 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9273.28061.1 >prot_D-dudresnayi_contig9273.28061.1 ID=prot_D-dudresnayi_contig9273.28061.1|Name=mRNA_D-dudresnayi_contig9273.28061.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=159bp
QCWCGLSNSLGDYDRHGEGTCRTPCKGNKAIACGGYDAFDLFFYRGDGSG
GGDGGGDGGETPASPAPDADSFDDLLELHNHVRCVHGADPLKMDKGVATS
AQAYAKTLASDDECGAATAPHSTGLGENVFICAINNEKESCYSAEAAMNE
FCELTIRR* back to topmRNA from alignment at D-dudresnayi_contig9273:7756..11588+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-dudresnayi_contig9273.28061.1 ID=mRNA_D-dudresnayi_contig9273.28061.1|Name=mRNA_D-dudresnayi_contig9273.28061.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=3833bp|location=Sequence derived from alignment at D-dudresnayi_contig9273:7756..11588+ (Desmarestia dudresnayi DdudBR16 monoicous)
CAGTGTTGGTGCGGCCTTTCCAATTCTCTGGGAGACTACGATCGTCACGG
CGAGGGCACCTGCCGGACGCCCTGCAAGGGCAACAAGGCAATAGCTTGCG
GGGGCTACGACGCGTTTGATCTGTTCTTCTACAGGGGCGACGGGTCTGGG
GGGGGAGACGGAGGGGGAGACGGAGGCGAAACGCCGGCATCGCCGGCCCC
GGACGCTGACTCGTTCGACGACCTGCTCGAGCTTCACAATCACGTTAGGT
CAGAGGGTGTACTTACTGCTAGACGGCACGCGCGCTCGCGTGTGCTTGAG
TTTGGGGAGGAGGTGCTCATTTGTTGCTTGCCTTGGTTATTTGACCATTG
ACCACGCATCCCTTTCGAGGCGGATCACCGTTCCTACTCCTAATAGAGAC
ACACCTCCAACACTTCGACCTTTGCACGTTTTTGCCGTATCCTTATATAC
AAGCCTTTTTGCTTATCTTATTCCCTTCCCGTTTCTCGCCTGTTTTGGCC
ACCATCTATCACGAGGGCCCCTAGTAAATTGGCCCAAAACGCTTATATTG
ACGTGTGCATCGCGAGACAGACGTCCGCGTGAATCACGGATCTCGTTCGT
TTCTATCATGCGGTGCGGCGGTAGACTTATCAACCATGCTACGTTTTCAT
TTTTCGGAGGCGGGGGTGGGGAGGGGATCGGGAATAAAGATACTTGCGTT
CGCCCTTTTTTCACCTTATTCTGGGCCTACAATGATTGATATGGGCCTCT
GTAAATATCTCGTAGGATAGCGATCATGTTCTCGACATTATCTCGTGTAC
CAAACGGGGGTAGGGGGTCGAGAATTTCTCGGCGAGTGTTGTATCCTTGT
TCATGTTCAGTTCACGCCATGGACGATGTAATATACATCTCTGGGGACAT
TATCTTTCGTCGGAAAAAATGCCGTCTCCGGTGGGGCGATATAGGGTCGG
TTCCTCCCGCCAAAGACGTCGCGGTTGACGGCTCTTTTCTTGTATGTGGA
TGGATCGCTAAGTCAATGGGTTTCACCGGCGTCAGTTCGAATATTATCAA
CTTCGCCAATGTGAAAGTAGAAAATGGGTCTTGTCCTCGACAGACGTTTT
GGCATTTCACCCCTTGTTGAGGTCATGAAATCAGTGGGGGTACATTGAGC
TTGTGGAGAGGGGCCGGAAGGGTCGGTTTTTTAGGTAAAAAAAGGTGCCT
ACCTTTGTGACCACGGGTTCGTGTGATCGGGCTAATGTGACGGAAGTAAT
AACATAATAATATACATGTACAAGGGCGCCTGCCGGGCAGTGACAGGTCA
CTGCCCGGCAGGCTCGCAGGATTTTAGGGCGCATGCCAAGGGTGTGAAAG
GAAATCCGCAAGGCATCGTGTCGGTGGCGTAAACGTCGTGCGAAAAGAAT
TCTGGGAAAATCGTAGTGCGTAAAACGTGTTTTCAACATTAGAGTAGAGA
CGAAACCCAAGCAGGAGACACTGCACTGATATATGATATCATCCCCAAAT
GGTAGGCGTTTCTATCTAAGCGCAGTTTGCCAATATTCCACGGTCTTCGA
TAGTAGTACAGCAGCACGACTACAGTACAGTAGTACAGTACAGCACACGT
CACACAGTAGAATGATAAATGATGCCTGTAGAACAGTACAGGGGTAGTAA
TAGTAGTATAATAGTAGGACCTGGTGTAGTAGAAGTACCCGTGGCTTCAG
AAAAAAAGACGACACCATGCGGATTCGAACTCAGGCTACAGAGAGTACAG
AGCAAAATTATGAGTACACAGCTTATTAAATTGATTGCTGTTATTTGTTA
TTTTTCGTTTTTTTCGTGTTTTTTTTTACGGTGTTGTGATGGTAGTGGTA
CAACAGTCATATGAGGAGGTTTCTCCGCTATTCTGTTTCGTATCATACCT
CGCACTGCATCTTTCTATCTGTCTCACACCGTCTCTCCTCTGTGATAAAT
AGCTAGCACTCCTTGAGCTATCACTTTGCCAGCAGGCACTCTGCTGGTCA
CACCGTAGCCAGCCCTCCTTTCTTGTATATCATATTGTCTTTGTCGTCGT
TTATCTGTTGTTGCTGAAGCTGTGCGAGTTGGTCCAGCCGCAACCCTCAC
ATTGTTTCCGCTGACTGTATCTCATGACCCACAGCGAGTTACCGGCCGCA
TACAAACATAAAGGCATTGCTGCCATCGTCCAATCATCACATCACGCAGG
TGCATATAGCTATGCAACTAGCAGGGACTCTGCGGGACACACCAGCCAGG
CGTTCCCTTCTTATGCATCCACCCCTCCTAGGAACGTACTCATGATACTG
CTACCGTTGTTGTAGAGCCTACAAAATAAATACACGAACTCTGGCTCTTG
TGGTGGACCCTTCATATTATTTGGCGTATCTTGGGACAGAACGGAGAGAA
AACACCCGAATCTCCGCGGCTCTTCTCGGCGGGCATCGCGATGCCACACC
AATGCCGCCTGTGTCCATACGCGATATCGGTACACTCGCTGTAAGTATAG
GATCAGGGCTCGGTGCCCTGTTAGCCATTTGGGACAATCGTATATAGGTG
TATTATAGGTCATCTCCACATATATATGATTTTATGCACCAGGTATCGAT
GTATAGCCTCTGTTAACAGTACAGTGCGGTCTTGTTCTTGCCCGGCAGGT
GTGTTCACGGAGCGGATCCGTTGAAGATGGACAAAGGCGTCGCCACGTCG
GCGCAGGTAAATGCTACTGTATATCGGCTGTCGGTGTAAATAACGGCATT
TTACGGGGAAAAACACGTCAGAGTATTCCGAGAACGCGCCTCTCGGTGTA
AAGAGCTGTATTTTTAATCAACAACACGTACATATACTCGTAGACGATGT
TGTGTGTGTGTGTGTTGTCTTCACGTTAAAAATCGTCCTTCCTACCCTAC
GACATCCAGCAGCGTATTCAGAGTCCCGTAATGATTATTCCATCCTAGAA
AGATACGAAATTCCGTGGTCACAAGCTACATCATAAATAACACCAAATCG
CAAATTGAAAAAAAAAACGGAATAAAAAAACAAAAAGCAGAAAACAAGAA
GAAAACAAGATATGCGAGTATCCAATAAACAAAAAAACGGTTGTCGGTGT
ATATATAGAACAATAGTTACGGCAATGACACGTAAGATACGAGTATCCAA
AAAATGGCAATCGGTGTAAATAACAATCAATAATTTACGGCAAAAAATAC
GTAGGAGCCAGAAGCAGGTACACCCCCTCCGCTGCTGACCCCTTTGCGGC
GCGCCTTTCTGCTTCCAGAAACACGACGTTTTTACATAAAATTCGGGATG
CACAAAATCCCAAAATCCGCTTGTTTTCTGTTTTTTTTTAGTGTTGATTA
CAAACGCTACTTGCCACGAGGGCTGTTTAACCAACACGATATTTTTTCCC
CTTCATTTAGGTGTCTTTTTCGATTTGTTTCGTGATACAATAATATATCG
TCTCCTACGAAAGCGAAAATTAATTAATGTCTTGAATTTGTATGAATTAA
TTAAATTTTGGCGTTTCATGATATAATTGTTTGATGTAGTTAATTTTCAC
TTCAGAAGGAGACGATATGCTTGGCAAAAATATTAACACGAAGAACGCGA
TGAGCCCTCTAACCCCGTTTCCCTAACACGCATGGCTGGATGTCCCAAAT
GTTGTGTGGCAGGCTTACGCGAAGACTCTTGCGAGCGACGACGAGTGCGG
GGCCGCCACAGCACCACACTCCACCGGGCTCGGCGAGAACGTGTTCATCT
GCGCCATCAACAACGAGAAGGAGTCCTGCTATTCTGCCGAGGCGGCCATG
AATGAGTTCTGTGAGTTGACTATCCGACGATAA back to topCoding sequence (CDS) from alignment at D-dudresnayi_contig9273:7756..11588+ >mRNA_D-dudresnayi_contig9273.28061.1 ID=mRNA_D-dudresnayi_contig9273.28061.1|Name=mRNA_D-dudresnayi_contig9273.28061.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=954bp|location=Sequence derived from alignment at D-dudresnayi_contig9273:7756..11588+ (Desmarestia dudresnayi DdudBR16 monoicous)
CAGTGTTGGTGCGGCCTTTCCAATTCTCTGGGAGACTACGATCGTCACGG
CGAGGGCACCTGCCGGACGCCCTGCAAGGGCAACAAGGCAATAGCTTGCG
GGGGCTACGACGCGTTTGATCTGTTCTTCTACAGGGGCGACGGGTCTGGG
GGGGGAGACGGAGGGGGAGACGGAGGCGAAACGCCGGCATCGCCGGCCCC
GGACGCTGACTCGTTCGACGACCTGCTCGAGCTTCACAATCACGTTAGCA
GTGTTGGTGCGGCCTTTCCAATTCTCTGGGAGACTACGATCGTCACGGCG
AGGGCACCTGCCGGACGCCCTGCAAGGGCAACAAGGCAATAGCTTGCGGG
GGCTACGACGCGTTTGATCTGTTCTTCTACAGGGGCGACGGGTCTGGGGG
GGGAGACGGAGGGGGAGACGGAGGCGAAACGCCGGCATCGCCGGCCCCGG
ACGCTGACTCGTTCGACGACCTGCTCGAGCTTCACAATCACGTTAGGTGT
GTTCACGGAGCGGATCCGTTGAAGATGGACAAAGGCGTCGCCACGTCGGC
GCAGGTGTGTTCACGGAGCGGATCCGTTGAAGATGGACAAAGGCGTCGCC
ACGTCGGCGCAGGCTTACGCGAAGACTCTTGCGAGCGACGACGAGTGCGG
GGCCGCCACAGCACCACACTCCACCGGGCTCGGCGAGAACGTGTTCATCT
GCGCCATCAACAACGAGAAGGAGTCCTGCTATTCTGCCGAGGCGGCCATG
AATGAGTTCTGTGAGTTGACTATCCGACGATAAGCTTACGCGAAGACTCT
TGCGAGCGACGACGAGTGCGGGGCCGCCACAGCACCACACTCCACCGGGC
TCGGCGAGAACGTGTTCATCTGCGCCATCAACAACGAGAAGGAGTCCTGC
TATTCTGCCGAGGCGGCCATGAATGAGTTCTGTGAGTTGACTATCCGACG
ATAA back to top
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