mRNA_D-dudresnayi_contig9.27758.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9.27758.1
Unique NamemRNA_D-dudresnayi_contig9.27758.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig9.27758.1 vs. uniprot
Match: A0A2G5E6Z0_AQUCA (Uncharacterized protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5E6Z0_AQUCA)

HSP 1 Score: 237 bits (605), Expect = 1.330e-74
Identity = 112/171 (65.50%), Postives = 137/171 (80.12%), Query Frame = 3
Query:  150 VVIGDTGVGKSCLLLQFVDRRFSSVHDLTIGVDFGSRIVDINGEKIKLQIWDTAGQESFRSIARSYYRDAAGALLVFDVTRRETFNHLGRWLDEARQFASPNICITLVGNKCDVSSKRQIDRAEAQAFADENGLAYVEASAKNADGVDEAFMSTCEKIYDNMKNGLFSRRN 662
            ++IGDTGVGKSCLLLQF D+RF  VHDLTIGV+FG+++V IN   IKLQIWDTAGQE+FRSI RSYYR AAGALLV+D+TRRETFNHL  WL++ARQ A+PN+ ITL+GNKCD+S +R + R E + FA ENGL ++EASA+ +  V+EAF  T EKI  N+  GLF   N
Sbjct:   10 IIIGDTGVGKSCLLLQFTDQRFQPVHDLTIGVEFGAKMVTINNRPIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLANWLEDARQHANPNMAITLIGNKCDLSHRRAVSREEGEQFAKENGLIFMEASARTSQNVNEAFTRTAEKILQNIHEGLFDVSN 180          
BLAST of mRNA_D-dudresnayi_contig9.27758.1 vs. uniprot
Match: G7KN60_MEDTR (Putative small GTPase superfamily, P-loop containing nucleoside triphosphate hydrolase n=28 Tax=Mesangiospermae TaxID=1437183 RepID=G7KN60_MEDTR)

HSP 1 Score: 236 bits (603), Expect = 2.670e-74
Identity = 111/171 (64.91%), Postives = 139/171 (81.29%), Query Frame = 3
Query:  150 VVIGDTGVGKSCLLLQFVDRRFSSVHDLTIGVDFGSRIVDINGEKIKLQIWDTAGQESFRSIARSYYRDAAGALLVFDVTRRETFNHLGRWLDEARQFASPNICITLVGNKCDVSSKRQIDRAEAQAFADENGLAYVEASAKNADGVDEAFMSTCEKIYDNMKNGLFSRRN 662
            ++IGDTGVGKSCLLLQF D+RF  VHDLTIGV+FG+R++ I+   IKLQIWDTAGQESFRSI RSYYR AAGALLV+D+TRRETFNHL  WL++ARQ A+PN+ ITL+GNKCD+S +R + + E + FA ENGL ++EASAK A  V+EAF+ T  KI  N+++G+F   N
Sbjct:   10 IIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMLTIDSRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTITLIGNKCDLSHRRAVSKEEGEQFAKENGLLFMEASAKTAQNVEEAFIKTAAKILQNIQDGVFDVSN 180          
BLAST of mRNA_D-dudresnayi_contig9.27758.1 vs. uniprot
Match: I2CPV8_NANGC (Gtp-binding protein gb2 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPV8_NANGC)

HSP 1 Score: 235 bits (599), Expect = 9.110e-74
Identity = 111/171 (64.91%), Postives = 137/171 (80.12%), Query Frame = 3
Query:  150 VVIGDTGVGKSCLLLQFVDRRFSSVHDLTIGVDFGSRIVDINGEKIKLQIWDTAGQESFRSIARSYYRDAAGALLVFDVTRRETFNHLGRWLDEARQFASPNICITLVGNKCDVSSKRQIDRAEAQAFADENGLAYVEASAKNADGVDEAFMSTCEKIYDNMKNGLFSRRN 662
            +VIGD+GVGKSCLLLQF DRRF  VHDLTIGV+FG+R+V I+G+ IKLQIWDTAGQESFRSI RSYYR AAGALLV+D+TRRETFNHL RWL+EA+ ++SPN+ I LVGNKCD   +R +  AE QAFA+ +GL ++E SA+    V+ AF  T EKIY+N+  G++   N
Sbjct:   10 IVIGDSGVGKSCLLLQFTDRRFVQVHDLTIGVEFGARLVHIDGKAIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLARWLEEAKLYSSPNMVIMLVGNKCDADGRRAVSTAEGQAFAEAHGLLFLETSARTGHNVEAAFSHTAEKIYENILQGVYDPNN 180          
BLAST of mRNA_D-dudresnayi_contig9.27758.1 vs. uniprot
Match: A0A1U7ZQI4_NELNU (ras-related protein RABB1b isoform X1 n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U7ZQI4_NELNU)

HSP 1 Score: 235 bits (599), Expect = 1.540e-73
Identity = 110/173 (63.58%), Postives = 139/173 (80.35%), Query Frame = 3
Query:  150 VVIGDTGVGKSCLLLQFVDRRFSSVHDLTIGVDFGSRIVDINGEKIKLQIWDTAGQESFRSIARSYYRDAAGALLVFDVTRRETFNHLGRWLDEARQFASPNICITLVGNKCDVSSKRQIDRAEAQAFADENGLAYVEASAKNADGVDEAFMSTCEKIYDNMKNGLFSRRNTN 668
            ++IGDTGVGKSC+LLQF D+RF  VHDLTIGV+FG+R+V I+G  IKLQIWDTAGQESFRSI RSYYR AAGALLV+D+TRRETFNHL  WL++ARQ A+PN+ I L+GNKCD+S +R + + E + FA ENGL ++EASA+ A  V+EAF++T  KI   ++ G+F   N N
Sbjct:   10 IIIGDTGVGKSCILLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLSHRRAVSKEEGEQFAKENGLIFMEASARTAQNVEEAFINTAAKILQKIQEGVFDVSNEN 182          
BLAST of mRNA_D-dudresnayi_contig9.27758.1 vs. uniprot
Match: A0A1D1V9C3_RAMVA (Uncharacterized protein n=2 Tax=Hypsibioidea TaxID=2558949 RepID=A0A1D1V9C3_RAMVA)

HSP 1 Score: 234 bits (598), Expect = 1.790e-73
Identity = 108/171 (63.16%), Postives = 143/171 (83.63%), Query Frame = 3
Query:  150 VVIGDTGVGKSCLLLQFVDRRFSSVHDLTIGVDFGSRIVDINGEKIKLQIWDTAGQESFRSIARSYYRDAAGALLVFDVTRRETFNHLGRWLDEARQFASPNICITLVGNKCDVSSKRQIDRAEAQAFADENGLAYVEASAKNADGVDEAFMSTCEKIYDNMKNGLFSRRN 662
            ++IGDTGVGKSCLLLQF D+RF  VHDLTIGV+FG+R++ I G++IKLQIWDTAGQESFRSI RSYYR AAGALLV+D+TRR+TF HL  WL++ARQ +S N+ I L+GNKCD+ S+R++ R E +AFA E+G+ ++EASAK A  V+EAF++T ++IYD ++ G+F  +N
Sbjct:   10 IIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIAGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFEHLTNWLEDARQHSSSNMVIMLIGNKCDLESRREVKREEGEAFAREHGMIFMEASAKTAQNVEEAFINTAKEIYDKIQEGVFDIQN 180          
BLAST of mRNA_D-dudresnayi_contig9.27758.1 vs. uniprot
Match: A0A6V1NY85_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NY85_HETAK)

HSP 1 Score: 234 bits (597), Expect = 2.080e-73
Identity = 117/202 (57.92%), Postives = 152/202 (75.25%), Query Frame = 3
Query:  150 VVIGDTGVGKSCLLLQFVDRRFSSVHDLTIGVDFGSRIVDINGEKIKLQIWDTAGQESFRSIARSYYRDAAGALLVFDVTRRETFNHLGRWLDEARQFASPNICITLVGNKCDVSSKRQIDRAEAQAFADENGLAYVEASAKNADGVDEAFMSTCEKIYDNMKNGLFSRRNTNRN-DAG-SDKEGAFALGGKNPPYGRKKCC 749
            ++IGDTGVGKSCLLLQF D+RF  VHDLTIGV+FG+R++DI+  KIKLQIWDTAGQESFRSI RSYYR AAGALLV+D+TRR+TFNHL RWL+EARQ ++ N+ I L+GNK D+  +R +   E + FA+ENGL ++E SAK A  V++AF+ T EKIY+N+ +G++  ++ +     G S  +G  A G  N   G K CC
Sbjct:   10 IIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMIDIDSRKIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKADLEHRRAVSTKEGEQFAEENGLIFLETSAKTAQNVEDAFIKTAEKIYENILSGVYDIQSESSGIKVGMSGGQGGNAYGSANRE-GSKSCC 210          
BLAST of mRNA_D-dudresnayi_contig9.27758.1 vs. uniprot
Match: E4X0J5_OIKDI (Uncharacterized protein n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4X0J5_OIKDI)

HSP 1 Score: 234 bits (597), Expect = 2.150e-73
Identity = 109/171 (63.74%), Postives = 142/171 (83.04%), Query Frame = 3
Query:  150 VVIGDTGVGKSCLLLQFVDRRFSSVHDLTIGVDFGSRIVDINGEKIKLQIWDTAGQESFRSIARSYYRDAAGALLVFDVTRRETFNHLGRWLDEARQFASPNICITLVGNKCDVSSKRQIDRAEAQAFADENGLAYVEASAKNADGVDEAFMSTCEKIYDNMKNGLFSRRN 662
            ++IGDTGVGKSCLLLQF D+RF  VHDLTIGV+FG+R+++I+G++IKLQIWDTAGQESFRSI RSYYR AAGALLV+D+TRR+TFNHL  WLD+ARQ +S N+ I L+GNK D+ S+R++ R E +AFA E+GL ++E SAK A GV+EAF++T  +IY+ ++ G F   N
Sbjct:   10 IIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLDDARQHSSSNMVIMLIGNKSDLESRREVKREEGEAFAREHGLVFMETSAKTAAGVEEAFINTAREIYEKIQEGAFDINN 180          
BLAST of mRNA_D-dudresnayi_contig9.27758.1 vs. uniprot
Match: UPI001B7DD7CF (ras-related protein Rab-2B-like n=2 Tax=Acipenseroidei TaxID=186622 RepID=UPI001B7DD7CF)

HSP 1 Score: 234 bits (596), Expect = 3.840e-73
Identity = 110/171 (64.33%), Postives = 140/171 (81.87%), Query Frame = 3
Query:  150 VVIGDTGVGKSCLLLQFVDRRFSSVHDLTIGVDFGSRIVDINGEKIKLQIWDTAGQESFRSIARSYYRDAAGALLVFDVTRRETFNHLGRWLDEARQFASPNICITLVGNKCDVSSKRQIDRAEAQAFADENGLAYVEASAKNADGVDEAFMSTCEKIYDNMKNGLFSRRN 662
            ++IGDTGVGKSCLLLQF D+RF  VHDLTIGV+FG+R++DING++IKLQIWDTAGQESFRSI RSYYR AAGALLV+D+TRRETFNHL  WL++ARQ AS N+ I L+GNK D+  +R + R E +AFA E+GL ++E SAK A  V+EAF+ T +++Y  +++GLF   N
Sbjct:   10 IIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMIDINGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHASSNMVIMLIGNKSDLELRRDVGREEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKEVYHKIQHGLFDVNN 180          
BLAST of mRNA_D-dudresnayi_contig9.27758.1 vs. uniprot
Match: A0A7J7I9C9_CAMSI (Uncharacterized protein n=1 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7I9C9_CAMSI)

HSP 1 Score: 234 bits (596), Expect = 5.150e-73
Identity = 112/180 (62.22%), Postives = 140/180 (77.78%), Query Frame = 3
Query:  150 VVIGDTGVGKSCLLLQFVDRRFSSVHDLTIGVDFGSRIVDINGEKIKLQIWDTAGQESFRSIARSYYRDAAGALLVFDVTRRETFNHLGRWLDEARQFASPNICITLVGNKCDVSSKRQIDRAEAQAFADENGLAYVEASAKNADGVDEAFMSTCEKIYDNMKNGLFSRRNTNRNDAGSD 689
            ++IGDTGVGKSCLLLQF D+RF  VHDLTIGV+FG+R+V I+G  IKLQIWDTAGQESFRSI RSYYR AAGALLV+D+TRRETFNHL  WL++ARQ A+PN+ I L+GNKCD++ +R + + E + FA ENGL ++EASA+ A  V+EAF+ T  KI   ++ G+F   N    D G D
Sbjct:   10 IIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQKIQEGVFDVSNELIIDIGDD 189          
BLAST of mRNA_D-dudresnayi_contig9.27758.1 vs. uniprot
Match: A0A4D9CUL7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUL7_9STRA)

HSP 1 Score: 235 bits (599), Expect = 6.570e-73
Identity = 111/171 (64.91%), Postives = 137/171 (80.12%), Query Frame = 3
Query:  150 VVIGDTGVGKSCLLLQFVDRRFSSVHDLTIGVDFGSRIVDINGEKIKLQIWDTAGQESFRSIARSYYRDAAGALLVFDVTRRETFNHLGRWLDEARQFASPNICITLVGNKCDVSSKRQIDRAEAQAFADENGLAYVEASAKNADGVDEAFMSTCEKIYDNMKNGLFSRRN 662
            +VIGD+GVGKSCLLLQF DRRF  VHDLTIGV+FG+R+V I+G+ IKLQIWDTAGQESFRSI RSYYR AAGALLV+D+TRRETFNHL RWL+EA+ ++SPN+ I LVGNKCD   +R +  AE QAFA+ +GL ++E SA+    V+ AF  T EKIY+N+  G++   N
Sbjct:   10 IVIGDSGVGKSCLLLQFTDRRFVQVHDLTIGVEFGARLVHIDGKAIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLARWLEEAKLYSSPNMVIMLVGNKCDADGRRAVSTAEGQAFAEAHGLLFLETSARTGHNVEAAFSHTAEKIYENILQGVYDPNN 180          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9.27758.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2G5E6Z0_AQUCA1.330e-7465.50Uncharacterized protein n=1 Tax=Aquilegia coerulea... [more]
G7KN60_MEDTR2.670e-7464.91Putative small GTPase superfamily, P-loop containi... [more]
I2CPV8_NANGC9.110e-7464.91Gtp-binding protein gb2 (Fragment) n=1 Tax=Nannoch... [more]
A0A1U7ZQI4_NELNU1.540e-7363.58ras-related protein RABB1b isoform X1 n=2 Tax=Nelu... [more]
A0A1D1V9C3_RAMVA1.790e-7363.16Uncharacterized protein n=2 Tax=Hypsibioidea TaxID... [more]
A0A6V1NY85_HETAK2.080e-7357.92Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
E4X0J5_OIKDI2.150e-7363.74Uncharacterized protein n=1 Tax=Oikopleura dioica ... [more]
UPI001B7DD7CF3.840e-7364.33ras-related protein Rab-2B-like n=2 Tax=Acipensero... [more]
A0A7J7I9C9_CAMSI5.150e-7362.22Uncharacterized protein n=1 Tax=Camellia sinensis ... [more]
A0A4D9CUL7_9STRA6.570e-7364.91Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9contigD-dudresnayi_contig9:56086..57662 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score240.4
Seed ortholog evalue8e-61
Seed eggNOG ortholog218851.Aquca_011_00419.1
KEGG koko:K07877
KEGG Pathwayko04152,map04152
GOsGO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0008150,GO:0009507,GO:0009536,GO:0012505,GO:0017076,GO:0019001,GO:0030100,GO:0031410,GO:0031982,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032879,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051049,GO:0051128,GO:0060627,GO:0065007,GO:0097159,GO:0097367,GO:0097708,GO:1901265,GO:1901363
EggNOG free text desc.Ras-related protein
EggNOG OGs37P81@33090,3GF17@35493,COG1100@1,KOG0098@2759
COG Functional cat.U
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04031,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Exons7
Model size971
Cds size642
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930827.4461381-UTR-D-dudresnayi_contig9:56085..563011622930827.4461381-UTR-D-dudresnayi_contig9:56085..56301Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9 56086..56301 -
1690557929.44663-UTR-D-dudresnayi_contig9:56085..563011690557929.44663-UTR-D-dudresnayi_contig9:56085..56301Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9 56086..56301 -
1622930827.6283722-UTR-D-dudresnayi_contig9:57549..576621622930827.6283722-UTR-D-dudresnayi_contig9:57549..57662Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9 57550..57662 -
1690557929.5353599-UTR-D-dudresnayi_contig9:57549..576621690557929.5353599-UTR-D-dudresnayi_contig9:57549..57662Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig9 57550..57662 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930827.4734797-CDS-D-dudresnayi_contig9:56301..563671622930827.4734797-CDS-D-dudresnayi_contig9:56301..56367Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9 56302..56367 -
1690557929.4596171-CDS-D-dudresnayi_contig9:56301..563671690557929.4596171-CDS-D-dudresnayi_contig9:56301..56367Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9 56302..56367 -
1622930827.4902694-CDS-D-dudresnayi_contig9:56571..567611622930827.4902694-CDS-D-dudresnayi_contig9:56571..56761Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9 56572..56761 -
1690557929.4691277-CDS-D-dudresnayi_contig9:56571..567611690557929.4691277-CDS-D-dudresnayi_contig9:56571..56761Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9 56572..56761 -
1622930827.5181496-CDS-D-dudresnayi_contig9:56863..570271622930827.5181496-CDS-D-dudresnayi_contig9:56863..57027Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9 56864..57027 -
1690557929.4793208-CDS-D-dudresnayi_contig9:56863..570271690557929.4793208-CDS-D-dudresnayi_contig9:56863..57027Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9 56864..57027 -
1622930827.543158-CDS-D-dudresnayi_contig9:57114..571501622930827.543158-CDS-D-dudresnayi_contig9:57114..57150Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9 57115..57150 -
1690557929.4897616-CDS-D-dudresnayi_contig9:57114..571501690557929.4897616-CDS-D-dudresnayi_contig9:57114..57150Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9 57115..57150 -
1622930827.5645416-CDS-D-dudresnayi_contig9:57226..573041622930827.5645416-CDS-D-dudresnayi_contig9:57226..57304Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9 57227..57304 -
1690557929.5004337-CDS-D-dudresnayi_contig9:57226..573041690557929.5004337-CDS-D-dudresnayi_contig9:57226..57304Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9 57227..57304 -
1622930827.5832076-CDS-D-dudresnayi_contig9:57370..574451622930827.5832076-CDS-D-dudresnayi_contig9:57370..57445Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9 57371..57445 -
1690557929.5112665-CDS-D-dudresnayi_contig9:57370..574451690557929.5112665-CDS-D-dudresnayi_contig9:57370..57445Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9 57371..57445 -
1622930827.6018782-CDS-D-dudresnayi_contig9:57516..575491622930827.6018782-CDS-D-dudresnayi_contig9:57516..57549Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9 57517..57549 -
1690557929.5253272-CDS-D-dudresnayi_contig9:57516..575491690557929.5253272-CDS-D-dudresnayi_contig9:57516..57549Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9 57517..57549 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9.27758.1prot_D-dudresnayi_contig9.27758.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9 56302..57549 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9.27758.1

>prot_D-dudresnayi_contig9.27758.1 ID=prot_D-dudresnayi_contig9.27758.1|Name=mRNA_D-dudresnayi_contig9.27758.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=214bp
MSASKNVQKISMVVIGDTGVGKSCLLLQFVDRRFSSVHDLTIGVDFGSRI
VDINGEKIKLQIWDTAGQESFRSIARSYYRDAAGALLVFDVTRRETFNHL
GRWLDEARQFASPNICITLVGNKCDVSSKRQIDRAEAQAFADENGLAYVE
ASAKNADGVDEAFMSTCEKIYDNMKNGLFSRRNTNRNDAGSDKEGAFALG
GKNPPYGRKKCCS*
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mRNA from alignment at D-dudresnayi_contig9:56086..57662-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9.27758.1 ID=mRNA_D-dudresnayi_contig9.27758.1|Name=mRNA_D-dudresnayi_contig9.27758.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1577bp|location=Sequence derived from alignment at D-dudresnayi_contig9:56086..57662- (Desmarestia dudresnayi DdudBR16 monoicous)
CTCTAGTGAAAAGAAGCTCTTTCTTACTATATCTAGTATTTATCTACGTA GTGAATCTCACTACTAACGTATAATTTGTTTTAAAATATTCAAAAAGCAA TTAAAGTTGACGAATGTCTGCTTCTAAAAATGTTCAAAAGATATCGGTAG GAAGCGGCAATCTTCACAGTATTATTTAATATTCTAACGCATGATTATTT TATTGATTATTCTTTAGATGGTGGTGATTGGTGACACAGGAGTTGGTAAA TCTTGCTTACTACTGCAGTTCGTAGACAGACGTTTCAGCTCGGTACGTCT CTCTCTCTCTCTGTCTCTTTGAAGCATATCTTATACTCACTTTCCTTACT CTATTTAGGTACACGACCTTACGATTGGTGTGGATTTTGGTTCACGTATC GTAGATATCAATGGGGAGAAAATCAAACTGCAAATTGTAAGCGACCTCAG CTACTTCTACTGCCACTGCTGATGTGACTTGCTTTTTAACCTTCTTTTTA TTATGTTATTAGTGGGATACTGCTGGCCAAGAGTCTTTCCGAAGTATAGT AAGTTATATATGATATCTTATTATTTTATATAAACCACACTATATTACAC ACTACTACTGTACGGACTGTCTACTCTGTCAACAGGCACGCTCCTACTAC AGAGATGCCGCTGGAGCACTGTTAGTGTTCGATGTCACCAGGAGAGAGAC CTTCAACCACCTGGGCCGCTGGCTGGACGAGGCACGACAGTTCGCCTCGC CCAACATCTGCATTACGCTAGTGGGCAACAAGTGCGACGTCTCATCCAAG TAAGAAGCTTGATTTTTTTCTTTTTTAAGTTATTTATTTATTATATAAAA CAAATATATAACTTATGTATATTATGTATGTGCATCTATTGTCGCTACTA GACGTCAGATTGACCGTGCTGAAGCGCAAGCCTTTGCAGACGAGAACGGT CTAGCTTATGTAGAAGCCAGCGCGAAGAATGCGGATGGTGTGGACGAGGC CTTTATGAGCACCTGTGAGAAGATATACGATAACATGAAGAATGGGCTGT TTAGCAGGAGGAATACCAATCGCAACGATGCTGGCAGCGATGTGAGTGCC TACTGTGTATGTATTATATAGTATAGTATATTGTACTATATATGTATATA TACTATACTGTACTACAATATAGTATATTGTACTATTTATATTGTACTCA CATATATATATAGTATATTATACTGTATATATAATATACTGTATTAATAC ATATATATATATATGTTATATATATGTTATATTATTATCGAGCAGAAAGA AGGCGCTTTTGCACTCGGTGGCAAGAATCCTCCTTATGGCCGCAAGAAGT GCTGTTCGTAAGTATGCGCCCTACTCACACTATGCATGCATACCGATGCC AACCTTTATGTACAATGAAGTAAAGCGTAAATACTGATTCGGAAACATTA AAGAATTTGTAGTAACTGGTACTGTACTACTACTACTGCTGTTGTCGTTA CTGTACTACTACTATTGCTGTATTTTTTCGAATTGTACGTACAATTTTTT GAGTAATATTAATGCCTCACTCTACCA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9:56086..57662-

>mRNA_D-dudresnayi_contig9.27758.1 ID=mRNA_D-dudresnayi_contig9.27758.1|Name=mRNA_D-dudresnayi_contig9.27758.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1284bp|location=Sequence derived from alignment at D-dudresnayi_contig9:56086..57662- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGTCTGCTTCTAAAAATGTTCAAAAGATATCGATGTCTGCTTCTAAAAA
TGTTCAAAAGATATCGATGGTGGTGATTGGTGACACAGGAGTTGGTAAAT
CTTGCTTACTACTGCAGTTCGTAGACAGACGTTTCAGCTCGATGGTGGTG
ATTGGTGACACAGGAGTTGGTAAATCTTGCTTACTACTGCAGTTCGTAGA
CAGACGTTTCAGCTCGGTACACGACCTTACGATTGGTGTGGATTTTGGTT
CACGTATCGTAGATATCAATGGGGAGAAAATCAAACTGCAAATTGTACAC
GACCTTACGATTGGTGTGGATTTTGGTTCACGTATCGTAGATATCAATGG
GGAGAAAATCAAACTGCAAATTTGGGATACTGCTGGCCAAGAGTCTTTCC
GAAGTATATGGGATACTGCTGGCCAAGAGTCTTTCCGAAGTATAGCACGC
TCCTACTACAGAGATGCCGCTGGAGCACTGTTAGTGTTCGATGTCACCAG
GAGAGAGACCTTCAACCACCTGGGCCGCTGGCTGGACGAGGCACGACAGT
TCGCCTCGCCCAACATCTGCATTACGCTAGTGGGCAACAAGTGCGACGTC
TCATCCAAGCACGCTCCTACTACAGAGATGCCGCTGGAGCACTGTTAGTG
TTCGATGTCACCAGGAGAGAGACCTTCAACCACCTGGGCCGCTGGCTGGA
CGAGGCACGACAGTTCGCCTCGCCCAACATCTGCATTACGCTAGTGGGCA
ACAAGTGCGACGTCTCATCCAAACGTCAGATTGACCGTGCTGAAGCGCAA
GCCTTTGCAGACGAGAACGGTCTAGCTTATGTAGAAGCCAGCGCGAAGAA
TGCGGATGGTGTGGACGAGGCCTTTATGAGCACCTGTGAGAAGATATACG
ATAACATGAAGAATGGGCTGTTTAGCAGGAGGAATACCAATCGCAACGAT
GCTGGCAGCGATACGTCAGATTGACCGTGCTGAAGCGCAAGCCTTTGCAG
ACGAGAACGGTCTAGCTTATGTAGAAGCCAGCGCGAAGAATGCGGATGGT
GTGGACGAGGCCTTTATGAGCACCTGTGAGAAGATATACGATAACATGAA
GAATGGGCTGTTTAGCAGGAGGAATACCAATCGCAACGATGCTGGCAGCG
ATAAAGAAGGCGCTTTTGCACTCGGTGGCAAGAATCCTCCTTATGGCCGC
AAGAAGTGCTGTTCGTAAAAAGAAGGCGCTTTTGCACTCGGTGGCAAGAA
TCCTCCTTATGGCCGCAAGAAGTGCTGTTCGTAA
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