mRNA_D-dudresnayi_contig10652.730.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10652.730.1 vs. uniprot
Match: D7FIG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG4_ECTSI) HSP 1 Score: 226 bits (576), Expect = 2.280e-63 Identity = 133/287 (46.34%), Postives = 175/287 (60.98%), Query Frame = 1 Query: 4 PGRPESSDPVRLALGPAAKAMGKKTEACLRRYRLLVLAQAKRRNRWNLPVGAVPDITVEISRLEQEARRSAQPKGGGRKRSREGKEATGGAGDKKFRKSRQTGLLAEDGPMV-----------ANVDESQIKAREQAAIAKAAGFEWVNEEGSWEEDGRSGGVLPRPFTHWDWTMDDLAAFTAVRQLLLVPENDFDPEQALERLVVFRPPALQKAYRALLSMKQITIMKEAWAASDYEVQDCVDYEVYKMIGRHGADMVTRGVMPARELFAIGFTPGSADQISSYDS 831 PGR S +R A+ P A +GK EAC RRYR + QAK + A+P + + + +RS + G R+TGLLA GP++ + ++ES+ KARE+AA+AKAAGFEWVNEE SWEEDGR+GGVLPRPF W WT ++L A AVRQLLLVP F+P QALER+ VFRPP LQKAYR+L++ +QI I + AWAA+DY VQD VD+EVYKM+GRHG MV+RG++ A L A+G + + +++S Sbjct: 1027 PGRDGYSSSMRQAVQPVADMVGKSAEACWRRYRNIANEQAK----YAAHGEALP---LPANMRTRNKKRSLDNEDDGGXXXXXXXXXXXXXXXXXXXXGRRTGLLAIQGPLMMADLGHLQFRASELNESRKKAREEAALAKAAGFEWVNEENSWEEDGRAGGVLPRPFDKWAWTTEELEALVAVRQLLLVPAARFNPAQALERMRVFRPPTLQKAYRSLMASRQIDIAQAAWAANDYSVQDSVDHEVYKMVGRHGKGMVSRGIVAAGRLHALGIADEWSSPLPTFES 1306
BLAST of mRNA_D-dudresnayi_contig10652.730.1 vs. uniprot
Match: A0A6H5JZA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZA5_9PHAE) HSP 1 Score: 189 bits (480), Expect = 1.580e-50 Identity = 118/262 (45.04%), Postives = 150/262 (57.25%), Query Frame = 1 Query: 4 PGRPESSDPVRLALGPAAKAMGKKTEACLRRYRLLVLAQAKRRNRWNLPVGAVPDITVEISRLEQEARRSAQPKGGGRKRSREGKEATGGAGDKKFRKSRQTGLLAEDGPMVANVDESQIKAREQAAIAKAAGFEWVNEEGSWEEDGRSGGVLPRPFTHWDWTMDDLAAFTAVRQLLLVPENDFDPEQALERLVVFRPPALQKAYRALLSMKQITIMKEAWAASDYEVQDCVDYEVYKMIGRHGADMVTRGVMPARELFAIG 789 PGR S +R A+ P A +GK EAC RRYR + QAK G + + ++ + G K +G +K RK R+TGLLA GP++ KARE+AA+AKAAGFEWVNEE SWEEDG +GGVLPRPF W WT ++L A AVRQLLLV F+P KAYR+L++ +QI I + AWAA+DY VQD VD+EVYKM+GRHG MV+RG++ A L A+G Sbjct: 1015 PGRDGYSSSMRQAVQPVADMVGKSAEACWRRYRNIANEQAK-----YAAHGEALPLPANMRTRNKKRPHDNEDDGXXXXXXXXXKSGSGKKENK--RKGRRTGLLAIQGPLM-----MAKKAREEAALAKAAGFEWVNEENSWEEDGCAGGVLPRPFDKWAWTTEELEALVAVRQLLLVSAARFNP----------------KAYRSLMASRQIDIAQAAWAANDYSVQDSVDHEVYKMVGRHGKGMVSRGIVAAGRLHALG 1248 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10652.730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10652.730.1 >prot_D-dudresnayi_contig10652.730.1 ID=prot_D-dudresnayi_contig10652.730.1|Name=mRNA_D-dudresnayi_contig10652.730.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=297bp RPGRPESSDPVRLALGPAAKAMGKKTEACLRRYRLLVLAQAKRRNRWNLPback to top mRNA from alignment at D-dudresnayi_contig10652:531..6844- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10652.730.1 ID=mRNA_D-dudresnayi_contig10652.730.1|Name=mRNA_D-dudresnayi_contig10652.730.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=6314bp|location=Sequence derived from alignment at D-dudresnayi_contig10652:531..6844- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10652:531..6844- >mRNA_D-dudresnayi_contig10652.730.1 ID=mRNA_D-dudresnayi_contig10652.730.1|Name=mRNA_D-dudresnayi_contig10652.730.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1782bp|location=Sequence derived from alignment at D-dudresnayi_contig10652:531..6844- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |