mRNA_D-dudresnayi_contig1065.727.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig1065.727.1
Unique NamemRNA_D-dudresnayi_contig1065.727.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig1065.727.1 vs. uniprot
Match: A0A6H5KY80_9PHAE (UBA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KY80_9PHAE)

HSP 1 Score: 380 bits (977), Expect = 1.140e-127
Identity = 215/338 (63.61%), Postives = 245/338 (72.49%), Query Frame = 3
Query:  114 MFPGFVGSPVTKGILASTLVASAVLHARDPGGNFNVTLD--IWRVLSDGELWRLVSCHTVCTSMGPLIASSLLLYRFRLVEPLLGSRKFGAFAALASVLALPFEATAGVYFGTTRLTPGPLPLVFALLVVYYVIVPPSKPRFFGALGMEFSDKAFTFCVAGMLAWCEGWASAVPAVCGALVGGLYVMDTMSIQAVRFPSLVYRCCARLCRPLMTPTRRGNPFGGGGGAASTARPYRSRPRPAWPPANGAIGPMAGGAGASRRGLFSFLSPPRPQASGSARLRNPSPPVPPQPPS----EDIVSALTGMGFERAAVLQALQHTGNDQFAAANILVSRAG 1109
            MF GF  SPVT+GILASTLVASAVLHARDP GN NVTL   +WRVL++GE+WRL+SCHTVCTSMGPL+ASSL LYR R +EPLLGS+KFGAFAA+ S LALPFEATAGVYFGT RLTPGP+PLVFAL+VVYY IVPPSKPR+FG LG++FSDKAFTF VAGMLA CEGW S VPAVCGALVGGLY+ DTMSIQAVRFP++V+RC +RL R  M+  RRG+ F G                    PA   + P A G        FSF +P R    GS RLRN               E+ V++L GMGF+RAAV+QALQ TGND   A N+LVSR G
Sbjct:    1 MFAGFGSSPVTRGILASTLVASAVLHARDPNGNLNVTLGEYVWRVLTEGEIWRLLSCHTVCTSMGPLLASSLSLYRLRALEPLLGSKKFGAFAAVTSALALPFEATAGVYFGTVRLTPGPIPLVFALVVVYYAIVPPSKPRYFGVLGLDFSDKAFTFVVAGMLASCEGWDSIVPAVCGALVGGLYLTDTMSIQAVRFPNVVHRCFSRLSRSFMSG-RRGSFFPGXXXXXXXXXXXXXXX-----PAQALLDP-ARGXXXXXXXXFSFFTPVR---QGSTRLRNAXXXXXXXXXXXXXXEEAVASLMGMGFDRAAVVQALQQTGNDSHTAVNMLVSRGG 328          
BLAST of mRNA_D-dudresnayi_contig1065.727.1 vs. uniprot
Match: A0A7S0XF64_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XF64_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.100e-30
Identity = 103/338 (30.47%), Postives = 165/338 (48.82%), Query Frame = 3
Query:  123 GFVGSPVTKGILASTLVASAVLHARDPGGNFNVTLDIWRVLSDGELWRLVSCHTVCTSMGPLIASSLLLYRFRLVEPLLGSRKFGAFAALASVLALPFEATAGVYFGTTRL-----TPGPLPLVFALLVVYYVIVPPSKPRFFGALGMEFSDKAFTFCVAGMLAWCEGWASAVPAVCGALVGGLYVMDTMSIQAVRFP-------SLVYRCC-ARLCRPLMTPTRR-GNPFGG--GGGAASTARPYRSRPRPAWPPANGAIGPMAGGAGASRRGLFSFLSPPRPQASGSARLRNPSPPVPPQPPSEDIVSALTGMGFERAAVLQALQHTGNDQFAAAN 1088
            GF  +PVT+G +   L +S  +      G+ +++ D+ R+L  GELWRL+  H   T+M   +  S+ LY  R+ E  +G +KFGAF  ++ +L++  +  A V   +        + GP  ++F+L  +YY  VP  + R  G LG++ S+K++ + +   L   +G+ S+  A  G L+G +Y  +T+ IQ++R P       S++Y    + L RP +   ++ G P G   G GA S    YR   RP                  + R + S  +P                    +PPSED +S L  +GF+RA V+QALQ T N+  AAAN
Sbjct:    5 GFENAPVTRGFIVLVLFSSLTI------GSVDISFDLNRILM-GELWRLLFSHIAFTNMAQAVVGSITLYTLRIFERQMGIKKFGAFIVISYLLSIVLQIAAIVIISSLGFDNYIPSSGPYFIIFSLTYLYYAHVPHLQSRRLGVLGIDISEKSWIYVLLIQLLLSDGFNSSGSAAIGWLIGFIYDSNTVGIQSIRLPKFVENVLSIIYNFLHSLLFRPTIPNMQQHGVPVGRDVGIGALSDFNEYRDMLRP----------------NNNNRYVPSVHNP--------------------EPPSEDSISTLMSLGFDRATVIQALQATDNNLDAAAN 299          
BLAST of mRNA_D-dudresnayi_contig1065.727.1 vs. uniprot
Match: A0A4D9D6H4_9STRA (UBA domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6H4_9STRA)

HSP 1 Score: 126 bits (317), Expect = 8.030e-30
Identity = 81/219 (36.99%), Postives = 111/219 (50.68%), Query Frame = 3
Query:  123 GFVGSPVTKGILASTLVASAVLHARDPGGNFNVTLDIWRVLSDGELWRLVSCHTVCTSMGPLIASSLLLYRFRLVEPLLGSRKFGAFAALASVLALPFE-ATAGVYFGTTR------LTPGPLPLVFALLVVYYVIVPPSKPRFFGALGMEFSDKAFTFCVAGMLAWCEGWASAVPAVCGALVGGLYVMDTMSIQAVRFPSLVYRCCARLCRPLMTPTR 758
            GFV +PVTKG     LV  A L +     +  + LD  R+L  GELWRL +           +    LLY FR  E  +GSRKFG+F  L+++LA   E A AG   G  R      L+PGP  +V+AL V++Y  VP   PR     G + SDK+  + V   L    GW +A+PA+CG   G LY  +   +Q+V  P ++ R  A +  PL+   R
Sbjct:    6 GFVNAPVTKGYCL--LVVGASLLSSYTHSSHTLRLDTTRILRKGELWRLFTSQIAFQEHPQTVLGVFLLYTFRHFERQMGSRKFGSFLVLSTLLATSTEMAIAGWLGGKGRIGEGLVLSPGPFGVVYALFVLFYTTVPKLHPRLLRVCGADLSDKSMYYAVGAQLLLGGGWKTAIPALCGLFAGILYRRNVFGMQSVLLPQVLCRGVASVLEPLLQARR 222          
BLAST of mRNA_D-dudresnayi_contig1065.727.1 vs. uniprot
Match: D5AE23_PICSI (UBA domain-containing protein n=2 Tax=Picea sitchensis TaxID=3332 RepID=D5AE23_PICSI)

HSP 1 Score: 107 bits (266), Expect = 8.150e-23
Identity = 96/330 (29.09%), Postives = 153/330 (46.36%), Query Frame = 3
Query:  123 GFVGSPVTKGILASTLVASAVLHARDPGGNFNVTLDIWRVLSDGELWRLVSCHTVCTSMGPLIASSLLLYRFRLVEPLLGSRKFGAFAALASVLALPFEATAGVYFGTT---RLTPGPLPLVFALLVVYYVIVPPSKPRFFGALGMEFSDKAFTFCVAGMLAWCEGWA-SAVPAVCGALVGGLYVMDTMSIQAVRFPSLVYRCCARLCRPLMTPTRRGNPFGGGGGAASTARPYRSRPRPAWPPANGAIGPMAGGAGASRRGLFSFLSPPRPQASGSARLRNPSPPVPPQPPSEDIVSALTGMGFERAAVLQALQHTGNDQFAAANILVS 1100
            GF  +PVTKG++    +AS ++ A     +F+ +L    ++    LWRLV+   V +S   L+    LLY FR+ E  +GS K+  F   A++ +  FE    V F  +    L PGP  ++ +L V +++ +P S    F    + FSDK+F + +AG+      W  S +P  CG L G LY M+   IQ ++ P LV    + L  PL++            G +ST    R+                     A+R  + + L     Q  G+          P    SE+ +SAL  MGF+R++ ++AL    ND  AAA++L++
Sbjct:    7 GFQNAPVTKGLVFICGIAS-IIAATQGRASFS-SLSYQAIVKKLHLWRLVTSVFVFSSTSELMFGLYLLYYFRVFERQIGSNKYSVFILFATIFSTLFELMILVLFKDSISGGLAPGPYGIIVSLFVPFFLDIPVSTR--FQIFSVRFSDKSFVY-LAGLQLLLSSWKRSLIPGFCGVLAGLLYRMNIFRIQRIKLPKLVASTASWLFAPLVS------------GGSSTISSRRT---------------------ATRETIDAPLGQ---QFQGNLV-------APTMAESEEAISALVSMGFDRSSAIRALAQARNDINAAADLLLN 288          
BLAST of mRNA_D-dudresnayi_contig1065.727.1 vs. uniprot
Match: A0A6V1Q7N2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q7N2_HETAK)

HSP 1 Score: 107 bits (266), Expect = 8.460e-23
Identity = 92/316 (29.11%), Postives = 140/316 (44.30%), Query Frame = 3
Query:  222 TLDIWRVLSDGELWRLVSCHTVCTSMGPLIASSLLLYRFRLVEPLLGSRKFGAFAALASVLALPFEATA-GVYFGTTRLTPGPLPLVFALLVVYYVIVPPSKPRFFGALGME---------FSDKAFTFCVAGMLAWCEGWASAVPAVCGALVGGLYVMDTMSIQAVRFPSLVYRCCARLCRPLMTPTRRGNPFGGGGGAASTARPYRSRPRPAWPPANGAIGPMAGGAGASRRGLFSFLSPPRPQASGSARLRNPSPPVPP-------------QPPSEDIVSALTGMGFERAAVLQALQHTGNDQFAAANILVS 1100
            T+D+ RVL +GE W +V      +S G LI   +LLY FR+ E  +GS K+GAF A+  +     E  A  +  G  R  PGP   ++A  V+YY  +P S+    G+ G            SDK  T+ +   L W  G +S +PA+ G L+G  Y      +  ++ PS + +    L +P +  T           +A  A+P R           G    M G  G  + G+ S       Q  G   L  P  P  P             +PPS++ ++ L  +GF+R  V++ALQ + N+   AAN L++
Sbjct:    6 TVDLNRVLKNGEFWSMVPSMIAFSSTGELIVGVMLLYTFRIFERHMGSPKYGAFLAIVGIAGKAMEIGAISILQGKLRPQPGPYSAIYAAFVLYYATIPSSR----GSSGSSAKNSRGLALLSDKTMTYLLGAQLFWGSGISSIIPAMSGVLMGLAYRTGMCRLDKLKLPSYLLKAFKTL-KPFVEST-----------SARPAQPQRQT--------RGNNVHMGGPVG--QAGVRSAQE----QLIGGGMLFGPRSPQQPLRQRQVQSQAIGLEPPSDESIATLMALGFDREHVMRALQASSNNVDIAANRLLA 291          
BLAST of mRNA_D-dudresnayi_contig1065.727.1 vs. uniprot
Match: B8C4J5_THAPS (UBA domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4J5_THAPS)

HSP 1 Score: 104 bits (260), Expect = 7.600e-22
Identity = 99/330 (30.00%), Postives = 153/330 (46.36%), Query Frame = 3
Query:  126 FVGSPVTKGILASTLVASAVLHARDPGGNFNVTLDIWRVLSDGELWRLVSCHTVCTSMGPLIASSLLLYRF-RLVEPLLGSRKFGAFAALASVLALPFEATA-GVYFGTTRLTPGPLPLVFALLVVYYVIVPPSKPRFFGALGMEFSDKAFTFCVAGMLAWCEGWASAVPAVCGALVGGLYVMDTMSIQAVRFPSLVYRCCARLCRPLMTPTRRGNPFGGGGGAASTARPY----RSRPRPAWPPANGAIGPMAGGAGASRRGLFSFLSPPRPQASGSARLRNPSPPVPPQPPSEDIVSALTGMGFERAAVLQALQHTGNDQFAAANILV 1097
            F+G+PV+K I AST  A+  + A     +  +  D  ++    + +R+  C+    S+G L+   L L    R  E  +GSRKFGAF   +SVL+  FE     ++F T R + GP P + A+L +Y+   P   P+FFG LG +FS+K+ T+ +   +    G ++A+P + G + G    M ++S+     P +VY     L          G  F     A   AR      R++ R A   + GA G     AGA                  +A L    P        E+ ++ L+ MGF+R AV++ALQ   N+  AAAN L+
Sbjct:   15 FLGAPVSKAIAAST--AAIYVLAEMNKWHEALVFDTSKIFDQAQFYRIFVCNLTFASIGELVFGLLALCPLMRRFEREMGSRKFGAFIIYSSVLSTIFELVFFNIFFDTERYS-GPYPQLGAVLAMYHKFAPRLHPKFFGVLGYDFSEKSLTYGLCAQVILSGGLSTAIPTIFGFISG----MLSVSLSQHELPEIVYTAAGTL----------GKAFVDDAPAIMMARTVQRGGRNQQRRA---STGARGGRDATAGAP-----------------AAALPAVQPXXXXXXXPEEAIAMLSSMGFDRDAVIRALQQADNNVEAAANRLL 307          
BLAST of mRNA_D-dudresnayi_contig1065.727.1 vs. uniprot
Match: A0A024UD62_9STRA (UBA domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UD62_9STRA)

HSP 1 Score: 102 bits (253), Expect = 6.520e-21
Identity = 96/332 (28.92%), Postives = 146/332 (43.98%), Query Frame = 3
Query:  123 GFVGSPVTKGILASTLVASAVLHARDPGGNFNVTLDIWRVLSDGELWRLVSCHTVCTSMGPLIASSLLLYRFRLVEPLLGSRKFGAFAALASVLALPFEATAGVYFGTTRLTPGPLPLVFALLVVYYVIVPPSKPRFFGALGMEFSDKAFTFCVAGMLAWCEGWASAVPAVCGALVGGLYVMDTMSIQAVRFPSLVYRCCARLCRPLMTPTRRGNPFGGGGGAASTARPYRSRP------RPAWPPANGAIGPMAGGAGASRRGLFSFLSPPRPQASGSARLRNPSPPVPPQPPSEDIVSALTGMGFERAAVLQALQHTGNDQFAAANILVS 1100
            GF  +PVT   L++T +AS      D      +TLD+  V    + WRL++CH    +   +     +L++FR++E   GS KFG F  L  +      +TA   +     TPGP PL+ AL V+YY  VP  +PR +  LG+  +DK+  + +  ++     +++A P   G LVG LY    + +  +R P  +      +  P+                A+  +  R R       R A     G      G       G    L P   QA    R+          PPSED +S LTG+GF+R   + ALQ + N+  AAAN L++
Sbjct:    7 GFYKTPVTYAYLSATGMASVAALFMDM--RHQLTLDLVSVTKLSQYWRLLTCHFALDNGIAVAFGMYVLFQFRVIERQFGSNKFGTFIILVLL-----TSTALQVWLKLPTTPGPYPLIGALAVIYYHNVPLLQPRLYSLLGLNVTDKSSIYGLLSLVCL-RSYSTAFPFATGVLVGLLYQSKYLPLSKLRVPGFL-AWFFEVFHPIFMVV-----------PATVLQQQRQRHLLEAQRRQATAIGRGHSHQEVG------HGFRDQLIPGMGQAPFHQRM----------PPSEDAISQLTGLGFDRDRAIAALQASDNNVEAAANRLLN 302          
BLAST of mRNA_D-dudresnayi_contig1065.727.1 vs. uniprot
Match: RBL20_ARATH (Rhomboid-like protein 20 n=26 Tax=Brassicaceae TaxID=3700 RepID=RBL20_ARATH)

HSP 1 Score: 101 bits (252), Expect = 7.410e-21
Identity = 88/329 (26.75%), Postives = 142/329 (43.16%), Query Frame = 3
Query:  123 GFVGSPVTKGILASTLVASAVLHARDPGGNFNVTLDIWRVLSDGELWRLVSCHTVCTSMGPLIASSLLLYRFRLVEPLLGSRKFGAFAALASVLALPFEATA-GVYFGTTR--LTPGPLPLVFALLVVYYVIVPPSKPRFFGALGMEFSDKAFTFCVAGMLAWCEGWASAV-PAVCGALVGGLYVMDTMSIQAVRFPSLVYRCCARLCRPLMTPTRRGNPFGGGGGAASTARPYRSRPRPAWPPANGAIGPMAGGAGASRRGLFSFLSPPRPQASGSARLRNPSPPVPPQPPSEDIVSALTGMGFERAAVLQALQHTGNDQFAAANILV 1097
            GF  +PVTK  + ++ + +     +  G +  + L    +     +W+L+      +S   L+    LLY FR+ E  +GS K+  F   +  ++L  E     +   TT   LT GP  L+FA  + +Y+ +P S    F   G+ FSDK+F + +AG+      W  ++ P +CG + G LY ++ + I+  +FP  V    +RL  P                       + + P PA  P+   +G ++                  P     A    P+P      PSE+ ++ L  MGF+R A  QAL H  ND  AA NIL+
Sbjct:    7 GFHNAPVTKAFVITSALFTVFFGIQ--GRSSKLGLSYQDIFEKFRIWKLIMSTFAFSSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTVSLLLEVILLSLLKDTTANLLTSGPYGLIFASFIPFYLDIPVSTR--FRVFGVNFSDKSFIY-LAGVQLLLSSWKRSIFPGICGIIAGSLYRLNILGIRKAKFPEFVASFFSRLSFPS----------------------FGNSPPPA--PSRNIVGTIS------------------PNTGRRAERSQPAPLPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILL 288          
BLAST of mRNA_D-dudresnayi_contig1065.727.1 vs. uniprot
Match: A0A178VJ62_ARATH (UBA domain-containing protein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=A0A178VJ62_ARATH)

HSP 1 Score: 102 bits (253), Expect = 5.390e-20
Identity = 88/329 (26.75%), Postives = 143/329 (43.47%), Query Frame = 3
Query:  123 GFVGSPVTKGILASTLVASAVLHARDPGGNFNVTLDIWRVLSDGELWRLVSCHTVCTSMGPLIASSLLLYRFRLVEPLLGSRKFGAFAALASVLALPFEATA-GVYFGTTR--LTPGPLPLVFALLVVYYVIVPPSKPRFFGALGMEFSDKAFTFCVAGMLAWCEGWASAV-PAVCGALVGGLYVMDTMSIQAVRFPSLVYRCCARLCRPLMTPTRRGNPFGGGGGAASTARPYRSRPRPAWPPANGAIGPMAGGAGASRRGLFSFLSPPRPQASGSARLRNPSPPVPPQPPSEDIVSALTGMGFERAAVLQALQHTGNDQFAAANILV 1097
            GF  +PVTK  + ++ + +     +  G +  + L    +     +W+L+      +S   L+    LLY FR+ E  +GS K+  F   +  ++L  E     +   TT   LT GP  L+FA  + +Y+ +P S    F   G+ FSDK+F + +AG+      W  ++ P +CG + G LY ++ + I+  +FP  V    +RL  P                       + + P PA  P++  +G ++                  P     A    P+P      PSE+ ++ L  MGF+R A  QAL H  ND  AA NIL+
Sbjct:  223 GFHNAPVTKAFVITSALFTVFFGIQ--GRSSKLGLSYQDIFEKFRIWKLIMSTFAFSSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTVSLLLEVILLSLLKDTTANLLTSGPYGLIFASFIPFYLDIPVSTR--FRVFGVNFSDKSFIY-LAGVQLLLSSWKRSIFPGICGIIAGSLYRLNILGIRKAKFPEFVASFFSRLSFPS----------------------FGNSPPPA--PSSNIVGTIS------------------PNTGRRAERSQPAPLPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILL 504          
BLAST of mRNA_D-dudresnayi_contig1065.727.1 vs. uniprot
Match: A0A6H5L6R3_9PHAE (UBA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R3_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 5.650e-20
Identity = 95/329 (28.88%), Postives = 150/329 (45.59%), Query Frame = 3
Query:  123 GFVGSPVTKGILASTLVASAVL---HARDPGGNFNVTLDIWRVLSD-GELWRLVSCHTVCTSMGPLIASSLLLYRFRLVEPLLGSRKFGAFAALASVLALPFEATAGVYFGTTRLTPGPLPLVFALLVVYYVIVPPSKPRFFGALGMEFSDKAFTFCVAGMLAWCEGWASAVPAVCGALVGGLYVMDTMSIQAVRFPSLVYRCCARLCRPLMTPTRRGNPFGGGGGAASTARPYRSRPRPAWPPANGAIGPMAGGAGASRRGLFSFLSPPRPQASGSARLRNPSPPVPPQPPSEDIVSALTGMGFERAAVLQALQHTGNDQFAAANILV 1097
            GF G+PV+K +   T V++ V+   +++D      +     RV  D G+ WRL++      S+  LI    ++  FR++E  LGS KFG+F  LA++L+   E    V F   R   GPLP++ A+ V YY  +P + P +     +  + K F +    +LA+ + + SA+ A CG +V  LY      +Q+ R P    R    +C               GG      R   +R +        A   +AG AGA             P      R+  P+       PSE+ ++ L G+GF+R  V++ L+ TGN+  AAAN L+
Sbjct:    5 GFAGAPVSKSLAIVTAVSTLVVLQNNSQDTAALIGI-----RVFGDDGQWWRLLTSMFPLGSVWELILCLNIIRVFRILERHLGSAKFGSFLFLAALLSKSIELALCVEFPFFRPPLGPLPILSAVGVAYYGYIPSTAPAYLTVGNVRVTGKFFAYAAVLVLAFHDTYNSAMSAGCGVVVALLYWSHLSPLQSFRIPG---RQLFAICGAAFP----------GGNQIEARRAQITRIQNIVGRRRQADRMLAGVAGADAG----------PATGLRQRMEIPA-------PSEEDITLLMGLGFDRETVVRVLRSTGNNTEAAANRLL 298          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig1065.727.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KY80_9PHAE1.140e-12763.61UBA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S0XF64_9STRA1.100e-3030.47Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A4D9D6H4_9STRA8.030e-3036.99UBA domain-containing protein n=2 Tax=Monodopsidac... [more]
D5AE23_PICSI8.150e-2329.09UBA domain-containing protein n=2 Tax=Picea sitche... [more]
A0A6V1Q7N2_HETAK8.460e-2329.11Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
B8C4J5_THAPS7.600e-2230.00UBA domain-containing protein n=1 Tax=Thalassiosir... [more]
A0A024UD62_9STRA6.520e-2128.92UBA domain-containing protein n=2 Tax=Aphanomyces ... [more]
RBL20_ARATH7.410e-2126.75Rhomboid-like protein 20 n=26 Tax=Brassicaceae Tax... [more]
A0A178VJ62_ARATH5.390e-2026.75UBA domain-containing protein n=1 Tax=Arabidopsis ... [more]
A0A6H5L6R3_9PHAE5.650e-2028.88UBA domain-containing protein n=1 Tax=Ectocarpus s... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig1065contigD-dudresnayi_contig1065:2598..14639 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score410.2
Seed ortholog evalue9.5e-112
Seed eggNOG ortholog2880.D7FMP5
Preferred nameUBAC2
KEGG koko:K01365
KEGG Pathwayko04140,ko04142,ko04145,ko04210,ko04612,ko05205,ko05323,ko05418,map04140,map04142,map04145,map04210,map04612,map05205,map05323,map05418
GOsGO:0000139,GO:0000151,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0006355,GO:0006357,GO:0006508,GO:0006807,GO:0006950,GO:0006984,GO:0006991,GO:0007154,GO:0007165,GO:0008104,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010559,GO:0010604,GO:0010605,GO:0010628,GO:0012505,GO:0016020,GO:0016021,GO:0016485,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0023052,GO:0030162,GO:0031090,GO:0031224,GO:0031228,GO:0031300,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031399,GO:0031625,GO:0031984,GO:0032182,GO:0032268,GO:0032269,GO:0032386,GO:0032387,GO:0032879,GO:0032880,GO:0032933,GO:0032991,GO:0033036,GO:0033157,GO:0033365,GO:0033554,GO:0034613,GO:0035103,GO:0042176,GO:0042177,GO:0043130,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044695,GO:0045861,GO:0045893,GO:0045935,GO:0045944,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051051,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051223,GO:0051224,GO:0051246,GO:0051248,GO:0051252,GO:0051254,GO:0051604,GO:0051641,GO:0051716,GO:0060049,GO:0060255,GO:0060341,GO:0061136,GO:0065007,GO:0070201,GO:0070727,GO:0070861,GO:0070862,GO:0070972,GO:0071501,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090317,GO:0098588,GO:0098791,GO:0098796,GO:1900037,GO:1900039,GO:1901564,GO:1901799,GO:1902494,GO:1902680,GO:1903018,GO:1903050,GO:1903051,GO:1903362,GO:1903363,GO:1903506,GO:1903508,GO:1903573,GO:1903827,GO:1903828,GO:1904152,GO:1904153,GO:1904292,GO:1904293,GO:1904950,GO:1905897,GO:1990234,GO:2000112,GO:2001141
EggNOG free text desc.Ubiquitin-associated domain-containing protein
EggNOG OGsKOG4463@1,KOG4463@2759
EC3.4.22.15
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00537,ko01000,ko01002,ko03110
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionUbiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
Ec32 orthologEc-23_001100.1
Exons9
Model size1162
Cds size1047
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig1065.727.1prot_D-dudresnayi_contig1065.727.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig1065 2598..14526 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927571.639635-CDS-D-dudresnayi_contig1065:2597..27441622927571.639635-CDS-D-dudresnayi_contig1065:2597..2744Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1065 2598..2744 -
1690556811.7362103-CDS-D-dudresnayi_contig1065:2597..27441690556811.7362103-CDS-D-dudresnayi_contig1065:2597..2744Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1065 2598..2744 -
1622927571.65328-CDS-D-dudresnayi_contig1065:3461..35451622927571.65328-CDS-D-dudresnayi_contig1065:3461..3545Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1065 3462..3545 -
1690556811.748957-CDS-D-dudresnayi_contig1065:3461..35451690556811.748957-CDS-D-dudresnayi_contig1065:3461..3545Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1065 3462..3545 -
1622927571.6653028-CDS-D-dudresnayi_contig1065:4144..43481622927571.6653028-CDS-D-dudresnayi_contig1065:4144..4348Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1065 4145..4348 -
1690556811.7567549-CDS-D-dudresnayi_contig1065:4144..43481690556811.7567549-CDS-D-dudresnayi_contig1065:4144..4348Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1065 4145..4348 -
1622927571.6780832-CDS-D-dudresnayi_contig1065:5460..55921622927571.6780832-CDS-D-dudresnayi_contig1065:5460..5592Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1065 5461..5592 -
1690556811.7643626-CDS-D-dudresnayi_contig1065:5460..55921690556811.7643626-CDS-D-dudresnayi_contig1065:5460..5592Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1065 5461..5592 -
1622927571.687368-CDS-D-dudresnayi_contig1065:6740..68821622927571.687368-CDS-D-dudresnayi_contig1065:6740..6882Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1065 6741..6882 -
1690556811.7726736-CDS-D-dudresnayi_contig1065:6740..68821690556811.7726736-CDS-D-dudresnayi_contig1065:6740..6882Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1065 6741..6882 -
1622927571.7001529-CDS-D-dudresnayi_contig1065:8515..86711622927571.7001529-CDS-D-dudresnayi_contig1065:8515..8671Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1065 8516..8671 -
1690556811.7832425-CDS-D-dudresnayi_contig1065:8515..86711690556811.7832425-CDS-D-dudresnayi_contig1065:8515..8671Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1065 8516..8671 -
1622927571.7126718-CDS-D-dudresnayi_contig1065:9856..99231622927571.7126718-CDS-D-dudresnayi_contig1065:9856..9923Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1065 9857..9923 -
1690556811.7931592-CDS-D-dudresnayi_contig1065:9856..99231690556811.7931592-CDS-D-dudresnayi_contig1065:9856..9923Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1065 9857..9923 -
1622927571.7226188-CDS-D-dudresnayi_contig1065:10938..110371622927571.7226188-CDS-D-dudresnayi_contig1065:10938..11037Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1065 10939..11037 -
1690556811.8053622-CDS-D-dudresnayi_contig1065:10938..110371690556811.8053622-CDS-D-dudresnayi_contig1065:10938..11037Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1065 10939..11037 -
1622927571.7330556-CDS-D-dudresnayi_contig1065:14510..145261622927571.7330556-CDS-D-dudresnayi_contig1065:14510..14526Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1065 14511..14526 -
1690556811.8148053-CDS-D-dudresnayi_contig1065:14510..145261690556811.8148053-CDS-D-dudresnayi_contig1065:14510..14526Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1065 14511..14526 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927571.745205-UTR-D-dudresnayi_contig1065:14526..146391622927571.745205-UTR-D-dudresnayi_contig1065:14526..14639Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1065 14527..14639 -
1690556811.823693-UTR-D-dudresnayi_contig1065:14526..146391690556811.823693-UTR-D-dudresnayi_contig1065:14526..14639Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1065 14527..14639 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig1065.727.1

>prot_D-dudresnayi_contig1065.727.1 ID=prot_D-dudresnayi_contig1065.727.1|Name=mRNA_D-dudresnayi_contig1065.727.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=349bp
MFPGFVGSPVTKGILASTLVASAVLHARDPGGNFNVTLDIWRVLSDGELW
RLVSCHTVCTSMGPLIASSLLLYRFRLVEPLLGSRKFGAFAALASVLALP
FEATAGVYFGTTRLTPGPLPLVFALLVVYYVIVPPSKPRFFGALGMEFSD
KAFTFCVAGMLAWCEGWASAVPAVCGALVGGLYVMDTMSIQAVRFPSLVY
RCCARLCRPLMTPTRRGNPFGGGGGAASTARPYRSRPRPAWPPANGAIGP
MAGGAGASRRGLFSFLSPPRPQASGSARLRNPSPPVPPQPPSEDIVSALT
GMGFERAAVLQALQHTGNDQFAAANILVSRAGSGGSGGGAGETGIPGGG
back to top

mRNA from alignment at D-dudresnayi_contig1065:2598..14639-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig1065.727.1 ID=mRNA_D-dudresnayi_contig1065.727.1|Name=mRNA_D-dudresnayi_contig1065.727.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=12042bp|location=Sequence derived from alignment at D-dudresnayi_contig1065:2598..14639- (Desmarestia dudresnayi DdudBR16 monoicous)
AGAGCTCAAAGTGTCGTGGAGGGTGTTTCAAGGTGCTTCTTTCGTGAATA GCGAGTGCATTACGCAGTTCCAGTGCAGTCGCCACATAGCACGGAAGACG TTATATTTTGAAGATGTTTCCAGGATTCGGTGAGAACGGCAACCGGTGAT GAAGTAGACTACACCAAAAAAAATAATACTCTCATCTTTCTTTCTCGATG CGACGTTGTGCTCAAAGAGCAGCGAACGAGTGCACCCGTTGCTGGGTCTA GCAGCGCTTTTTAGCTTCTTTGTACTCACCAATACTCGGGCCTGTTGCGG CGATGATATCTGTGTGCTGTATTATGTTGAGCGTCTTCGTGTGTGGAGCT TATACTGGTTGCATGCAAGACGCCCTTTTTGGTTGCTTGTCTTCGCAGTT CTAACACGAGTTGCAATACAACAAAACAGTACAACAGCAGTAGTAGTACG AGGTAGTAGTAGTAGTAGAGATGCCATTTGTTCCGTCACTTATCATAGGA GTAGTCTCTCTATACTACTGCTACTATCATACTTCGACGTACGTATAATA CTACTTCGTACTTCCGTAGACGATTGTTGGAGTATGATATGGTTGCTTGA CTCGTGCAAAGCCAAAGCTTGAACGACGGCCGCAGCAGGCCCTGTAGAGG ACCAGTTCGAGCGCCGGCCTCATCCGCACTACTATCTTACGCCACCAGGT GTGCAAGAACTTTTTTCTTGAGCGACGAATCGACTGCAGAAAGCACCTAC CCGTAGCGTGTGAGATGCACCATGCGACGCGAGTCGACGAGGGTAGAAAG TGTTAGTTTGCACCCTTCGCTCGATGAAAATACAGGCACGTATTATACCG TAGTGGGGAGGGGGCAAGAGTGCCTGCTTTGTGACCCCGGATCTGAATTA CGAACCGAGATGGAGCTGGAGAAAGAATAGGGCGAAGATAATAAATAGGA GGGGGAAAAAATGAGAGCACTACTCCGCACAGCACAGCACAATCCAGTAC GTCCGTTGAGCTTGGCATAACAGTTTGTTATTTTTACTTGTAGGAACGGT GCACTCCGTCTCGAATGGGATGCGTGGTCAATGGTCAAATGACTAAATGA GTACCCCTACACTGAGGGTCTCCCCCGCGTGGGAGGGGGGCGTGGGGAAA GGGTAAAAGGCCAAATTGGTGCCCCCCCCCCCCCCCCCCCCCCTGAGATA CATGCCATGGTTGTCGAGTTAGATCATGTTGTGCGGGGTGGAGAACCTGA ACCCCGCGCAAGTGGGATGGTATCACGTAGTGTATATACTCGAAGTATGG TAAGGCAGCCACGAGGCAGTTGCATAGTATTCTCGTGGCTGTCTCTGGAA GTGGCCACACCAGAAAACAAACTCTTCCGTCGAAAACATCCATATGCAAG AACGTACGCACAAGGTGCCGAAGTCCGCCTCACAAGTGGTTCTTAGTAGG ATGCAGCTCACCCTTCATGCGAATCGCCGAACACCTCACGGCGCTTCGCG CTTGGTGCACGCGATGTCCGCCTGGTCGGTGAAAACCCAACGTGCTTCGT CCCGGCATAGTTGGGACGCGAGGGTCTATGGTCATACGACTACGGCCATG CATGAAGTGAGTACACCCCTCCTGAGATGCACGACCACACCTGCCGTCGG GACCATTGTTGGAAATGGTACCTAGGATAGGCTGCCGTACGGCCCATATC CGTGTGTGCCTTCGCGCCAAACCCCCGAGACGTCTCGCGTAATAAGCTGT GCCCTAAGAGCCTACACCCGCATTGGCGTCACCGGCAATCAAAGTACGAC ATCAGCTCTCTTATAGTTGATATCATGATCGCTGTTCTGGCCATCATGGT CATCGATTGTTCCGACCAGGCCTGCCGGCTTTGTGCGTCCGTCAACCTGT TCTTACTGCAGGCTGAGACGGTCACCTGGTCGGGTGCTCGTCTACTCAGC TTACAGCCCAGCAAAAAGGAAGCACGTATAATACCGTTAATGCTATCATG TGATAGTGCGGAAGAAGATGGAAAATATGCACGCTTGGGTGATTTCCAAA CGCCCCGGATGAGGAAAACCTCGTTTGTATTTGTCGGCCATAGCCCAAGA ATCCAGTTATGTATGTGCGGTAGATAGGAGTGTTAGCGTAACACCATAGC CACTGAGCTATGATATTCAGTCAGCGCTGACTGAATAACTCAGTGGTTGT GGTGTATTTCTAACAAAAGCATAGACCTTCTCGGCCTTTTTTTGCTTGAT GGAAATTACGGAGGTACACATCTGAAAGTTATGGTACACACCTCCATGCA AGAAGAAGACTCGTGAGCCCGCCCAATGACGGGCAGCGTTGGCTAGAGGG ATTGCAACCCTTGGGTAAAAATATGAGGTTCCGGCTTAACAGCCAGACGG ACCCCAGATTGTGCTTTTGTTAGAGATACACGATAGCCACCGGACTATTC AGTCAGCGTTCATTGAATTGCTCAGTGGTTGTGGTGTTACTCTAGCAGCG AGGCCGTCCTCTCTTTGTTCGAATTTGCTGCACGAGTGGGACAACTTTAT TGAGCCACCTGGGCAACATGTAGGACGGGTCTTTCTTTGTTCGTTTTAGT ATATATGATTATAGTAGTACCAACGTGGGCTGCTCAGCAGTTTCGGAAAA TTCTACCACTAACCCTAATCCTTACCCTGACGAACACACCTATACCAAAA GCAAGTCAAGACCTCCGTAAAGTTCCGTCCTACAACATTGCTAAGCCTTA CTGACTTTTTTTTAACGTTGCCTCTTCGGGTGGCTTACCTCCAATGGTTG ATGCCTGACACTACTAGTGGGGCGGAAGGGCGACCGACGTACCCGATCTG TAACCTCAACGTTGCACAATGGTTGATCAGGGTTGAATCGGGATTAGTTG ATCTCGACGCGGTTATCACGGCCGCGGAAGTTATGCTTTTATGTTTATCC GTCCGCCGAACGATGAAAAAAGTAAATATAGGAGGATTCGGTATTTGAAT CCGTTGTTTGTGGAGGCGGATTACGAATTATTCGGTATATGAATGCATTG TCTAGTGGAGATGTGTGCCCTTGTGCCCTTGCTCATCAGTCTGTTTGTCG ACGGGTTTCTGAGCGTGCAGCTGAGAGACAGCAATATCCGAAAGGGATAG AGAGTACACCAACGGCAGCGGCACCTCGGCAACGAGAAGGGTAGCAGTAG TAGTAGCGTCTGGGACTGGATCTTTGTGTTTATCAATCCGCCGAAGGATC AACAAAAAACAAAATATATGATACCTATCAGAAGCACCATCATACCATCA TAGAATCATATCATACCAGTAGGAAAACTCATATTTTTCGTACTCCGTAT TATTATACTCCGCAATATCGTGCGCGTATCGTTTTATGATAGAAATTTTT AACCGCTTTTTTTTAACTACAATTACCTCAGCCATGACGCTCCAAACTGA TTCGGAGGGGATCCAGGGGATAATCTGCGATACTTGTTTGTATAATGTAC GGTATTTATCGTAACCACGAAAACACCATCTTGCTCCACGGTTTCGTTTT GGTTTTCGTGTAATGTAACGGTTTTTGATCCGGACTTTTGTTTTTTTTAC AGTTGGCTCCCCGGTGACAAAGGGCATCCTCGCCTCTACCCTTGTCGCGT CGGCTGTGCTGCACGCCAGAGACCCGGGAGGGAATTTCAACGTTACGCTT GGTGAGTGTTTTGTCATGCGACCATATTTTGTACCGGTTTATTGTATTTT TGCTCGTGTACTCTTAAGGTGTATATGTTGTGTGTACATGTGCGGCGAGT TTTTCTACTTTCGCTTGTCGAGGCATGGACGGGACCCTCGGCCATGTTGG CACCAAGGTACAGGTATAAGGTACCATCTATAGGGCATATATGTAAGAGG TAAAAGGTACAACTATCAGGTATAGCTATGAGGTACAACTATACAGCAGC TATGAGGAACACCTATAAGGCACATAAGGCACAGCTATAAGGTACATACA TAAGGTACAACTACAAGGTACAGCTACAAGGTAGGATGATCTGTTGTGGC AACTTTGTGGCGACAGACTTCAAACTGGCCATGATTCAGTTTACAACAGT ACAGTACGTAGTAATATATTGTCCATTACAGCTATTACGTGATACAACAG TAATTCACAATGTTTGCTGCCCGCTGTTTTTCTGGTGTGTTGCGTTGTGA GAGATATATCCATTCGAATATACCTGGTACTCCGCAGGAGTTATATGTAC CCGGTTGTCATGCAGGCATGCATCGAGAGGGGGTTTGCCGCGTACCGCGC CGTGCATTTAAGTGGGCCACGGCTGATTTTTTTTTTTTGACTTTCGTGAG CTGCTAGCTTCCGGGAGAATTTTCCCATGGTCTTGCGGGGGGATCCATCT CATTTTTGTTTTAGCCGCTCTAGCGTTGCTATGGTTGGTAGCTCAGATCT GATAGGATGTTCGTTTTATTCTATGATTTAATATAGTAATAACGTGGGCT GTTCAACACTTCGGAAAATGCCATCGCTACCCCTAAACCCGAAACCTAAC GAACACACTGTAAATTAATATAAGGGTCAAAACTTCTCCAAAGATTCGAG CTACCAACCATAGTGCTGAACCTGCTGTTTTTTTTTTGTGTCTACCGGCT AAGATACTCGGATTTTTCCAACGAGTACCTCTCCTCCTCTCCTCTCTCCC CAACGCTCACTGGCAGACATCTGGCGAGTGCTGTCCGATGGAGAGTTGTG GCGACTTGTATCCTGCCACACGGTATGCACCAGGTGAGAAAACGAGCGGC ATTATTAGCGTTTTTTTGTAAGCCTAATCTTTTAGGATTTTGTTTGTTTT ATTATTTTTACTTACAAAGACATTAGGGTGTGACGTTTCTTTTATTATAT GATTAGTAACAACGTGGACTGTTCCAACAGTTCCGAAAAATTCTACCACT TAACCCTAACGGACACACGAACACACCTACGAAGTATACTAATAGTAAGT CAAAGCCTCTGTAAAATTCCAGTAAAAGTTCCGTCCTACAACAACGCTAA ACCTACTGGAGAAAATCTCGTATCTTATAGAATACTACTGGTATATCCTA CCGTTTTTTTGGATTCATTTGATTGGGGGATTCGCTTGAGAGTTCGCGAG GGATGCCGCAGTGCCCCCCCCCCCCCCCCCCCCCCCCTTCTCCCCCTCTT ACAAGACAAAAACCGGCCAACTACTATATCAAGTAGTTGGCGCTATGGTG TACCTGGTAGCTATTATAGTTGTACACCGTCGCCCATGGTGGCGGAAGTT CGGGTGGTCGAATCCCGGTAAATTGAAACTTTTTTGTTGTTGTTGTTGTT GTTGTGCCGTTTTTCGTCGCGGAAAGCGCACGAGAGAGAGAGAGCGCGTG GGTAAGCAATTTTTTCGATGAAAATCGACGAGCTGTGGGGAGAGTACCGA GCCCAGTACGCACTATAGAGCGTTCAAGGCAGGTTGCCGGAAGGGTAGAC ACCTGTGACCACGGGTTGCCGAGACAGCCGCTGAACGACGAGCTCTTCCT GCGAAAGCTGGACTGGGAAGCTAGAGTGACGAAGTGGCCAATAATTAGCG GTCACAAATATTCAATACCCCACTACTTCCGCCAACCATAGATATGTCGC AAAAGAGAGAACCCACGCAGGTACTGTTGTGCATTGCTTATTACCCGCTC GTGCTCGTTTTATGTTTTTTTATCCTCTATCGGATGGGTGAAACGGTGCT CCGTCTCGAAAGGGATGCGTGGTCAATGTAGTCGATTGGCTTTAAGGCAA GCAACAAATGAGTACACCACCCCGCCCCCCCCTCCCGCCCCCCCCGCGGT AGTGTGGGACTTGCGTAGGCTCATCCGCTATGTGCTTATTGCATCCTCCA TTTAACAAACAAATCTTTGCAACCCGTATTTTGTCGATTCTGTTTTTTTT TTTGTGTTAAACTAAAAGCATGGGGCCGTTGATTGCGAGCTCCCTGTTGC TTTACCGCTTCCGTTTGGTGGAACCCCTTCTGGGGTCTCGCAAGTTTGGC GCGTTTGCGGCGTTGGCTTCCGTCCTGGCTCTTCCGTTCGAGGCCACGGC GGGGGTGTACTTCGGAACAACCAGGTACTGTGGTATGACCACGTGGGCTG TCATGTGCTGCAAGTCGCTGCGTTGTACCTTATCTGAGGACCGACAGAAT CTGCGCACACCGAAGTACGACACAGTAAGGTTGACGATTATCCTCTGGCC CCCGAACCAGTTTGGAACGTCACGGCTAATGTATTTGTAACTAAAAATAA CAAATCGTGTCGTTGTCTCGGTATAGTATTCTTTGTTTTCATTCCATTTA TTACCTTCGCCCTTGTTTGGGGTAACTCAGATCCGGGGTCACATAGCAGG CACTCTCCTCCCCACCTTCCCACTACGGTACGTGCCTATATTTTTATCGC GAGAAGGGTGCAGCACTGTCATTCCTCGTCGACTCGCATCGGATGGTGCA TACACACCCTACAATAAGCGCTTTCTGCTGTTGGTTTGTTGCACAAGCAA AAAGCCCCTCAGGGGGGCTCGAACTCGCGACCTCGATCTTAGTAGATTTC GTAGCTTATCCACTACACCACGCAGGCTGTCGGTTTACTTGCGTAGATAA AAAAAAGGTAATATAGCTATCGCGGGCTTCTTGTTTTTCAATGGTCGTGG GCGTCCCCCTCCCCCGCCCCGGATAAGAGCCGTGATACGTAGCATAGAAT TTCCAGAACCAGACTCGACAAGGATGCTGTTGAAACCGGGTGTGTTTATG GATGGTACGAGTACGAGTAGCTCTTCTTTTGAAGAGGTCTGCTGCAGTCC TGGTGCGCTTTCTGTTTGTGGGCGTTCAGAGCGATCATGAGGCTTCTTTT TGTTTTTTTGTTGGCGAGAGGGACAGGTTGAACCACGATAATAATGTCGC CCCCACGCCCCGGGGCCACAGCGACATCACGTTGGAATGGGTTGTGGAAG TGCACATGCGTTGCCTTTTGTCCTTCCCGCCCCCATCCTCTCGAGGCAAT CACTCTTTTAGGATTAATAGGAAACCCTGTCCGTCCAGCGGGGGCGCGTT CCATAGACCACCTGCTATATAACAAGAAAAAACGAAAATCACGCTGGGGA GAAATCACATAAAAAAAAGTATTTTTCCATGCTCGTATTTTCCCCCAGGG CGACGTTCGTTTTTTTTTCTTGTTATATTGCAAGTGGTTGTCTAGCGACT ATAAGTATGTGATTACTCGTATAGGAAACAAGTTTGTTTTTTTTCAGACC GATATGGGGAAAAGTATTGGTCTGCGGTCTACTGTAGGTAGCCAACAATA GCGAATAGCGACACCGAAACGGACCCTCCTCTATCGCCAGTGCATAATGG TTGATATCCTGTAGTAGCGATTTTTTTTTTTTTTTTACGTACGCAAGACG ACGGCGGCCTTGGAAGAAGCTGCCTGGCCGACCGACCGATTGTTGTTGTT CGTCTCACATTAGCTCATGGCCAAACCATAATCTAGCCCGTGGTCACAAA AAATTAAAGCTCAACGTTCTGAAAAATTTTTGAGGCAAAGAAAAAAAAAT AACCCGTCACTCGGAGAAATCGTACTATTGTATGTACCGTATGGCATACG TAATGATTCGTGAGTAATATACACTGCCACCCTCGCTTCTTTATTGCCCC CCTGTCCCCGGTCCTCACCTTCCATGTCCGTCGCGTTTTGTGTGCTAAAC GATGTAGGCTTACACCGGGGCCGCTACCGCTGGTGTTCGCGTTACTCGTG GTGTACTACGTGATCGTGCCCCCTTCGAAACCGCGCTTTTTCGGCGCCTT GGGCATGGAGTTCTCCGACAAGGCGTTTACCTTCTGTGTGGCAGGCATGG TGAGACGTTGTCTAGGGGGGGAGGGGAGAGAGGATGGGTTGTGTGTGTTT TAATTCAACCTCGTCGTGTTGATTGGGAGCGAGGGGGGTGTCCACACGAC AACGGATGTGTCATAATGTTGGGGGCGCGGGGGCGGGGGCGGGTGTACTC ATTCCATGCATGGCCGTAGTTGTATGACCATAGATCTTCGCATCCCTACA ATACCGGGACGGACCACGTCGTGTTTTTCACAGACAAGGCAGACATCGCG TGCACCAAGCGCGTTAAGCGCCGTGAGGTGTTGGGCGATTTGCATGAAGG GTGAGCTGCATCCTACTAAGAACCATTTTTGAGGCGGACATCGGCACCTT GTGTGTACTTCCTTGGGGGGGAGGGTACTTGTTTGCTGCTTGCCTTAAGT CCTTTGACCATTGACCGCGCTTCCCTTTCGAGACGGAGCACCGTTCCTAC TCCTAATAGAGGCACCTCCAACATTTGGCCGTTCTTTACGTTCCTGTCAG GCTGGGGTATTATGTTTTATCGTCATCTTGGTCTACAATAGTGATGGAAT ATTCAAATGGAGGGCAAAACAAAACTCACGAATCACGAAAAAAAAAAAAT GAATGATGACTCGATCCCAGAACAAAGAAGCCCGTAGTATAGTAGTCGCG TGATGACGAAGGGGATTGCAAAAAATCGGACAAGAAGTAAACCACGATTC GTGACTTTCAAACGTGACTTTTAGCAACACTGCAATAACCAAAAAAAGTC ACGAAAAGCGTACTTTGTTTTGGTCATGATTCACGACTTTTTTTTTTGCC CGTTAGAACCGACCCTAAACGTTGTCATGAGTACGACCCTTCCCCCTTAT CTGTGATCTGTCACCCCTGTCACGTTGCTGCGGTGTCTGTGTGTGCTGTG TGTTTGCTTGTTTTCCCATCCCATTTACTATCTTCGCTCCATTATTTCTC AAGCTCTATCTCCCTTCATCACTCAGATCCGGAGTCACATAGCAGCCGCT CCTCCCCCAGCTCCATCTCCCTTCGTAACTCAGATCAGGGGTCATATAGC AGGCGCCCCTCCACTACGGTAGACGTGCCTATATTATTATCGCGAGAGAA GGGTGCAGCAACTTCTCCCGTCGTTTTTTGTTTTTAATCGGTGCCAGCTG GCGTGGTGCGAAGGATGGGCCTCAGCCGTGCCTGCCGTGTGTGGAGCGCT TGTGGGCGGGCTGTACGTGATGGACACGATGTCTATCCAGGCCGTGAGGT TTCCGAGCCTGGTGTACCGGTGCTGTGCGGTGAGAGGTTTTGCCCCTCCG ACATTTGTTGCCCTCCCTTTTTTTTTTAGCTCTGGGTTTAGACTTTTTTA ATTGACTTTTTTTTTGTCGAGGGGCGGGAATGGCTTGGGGGTTGCTGCCG AATTTCCGTGGACGGCAGGCAGGAGATACAGGTATATGGCATCGAACGAT TGAGTGCTATTAAACACAGTAAAAATTGTTAGGGACATGCGAAATGTTTG ATTTTTGGTAAGAAGCAGGGGTTGGCGCTGTGGTCTCTTAATTGGTTAAT AGATCGTCACGCCTGTTTGGCGGAATTCGAGGTTCGAGTCCCGAGTGAAA ATAAAATTACAGTTTTCTGTGCCATCTTCTGTCGTGCGGAAAGCGCGAGA GCGCGAGTAAGCACGATTCGATGAAAGTCGACGAGCTATGGGAATGCCGG ACCCTATGCGCGACATAAACCGAGGAATGTACCCGGGGGGGGAAGGGTAG ACACCTGTGACCACGTCTTTGCTCAGACAGGCGCGCTGAGCGATGAGTAG AAGAAGTATGATAGTCCTGTGAGCTATGATAGATGATGGATGATGGACTG GGAAGTAACAGTGATGTGATAAAAAAAAATAATGGTGTACGACGTAGTGT GACAAATCAATTAATGCAATATCCAAGTTTTGCTTACGTCCGTTAAGAGA GAGAGGGTTGCTATTATCGTGGGTTAAGAAAAGCGTGCTGTAGACCGTGC GCGGTACACGATACGGTGCGGTACAGCGCTGTAGATAGCATGTGCCCTTT GTCCCGCCGTTTTTTTTTTTTTTGGTTTGTCACTGGTGTTGATGGTGTCG ATGGTATTGATGACGTGATGTTGACGATGGTGGTAATGATGTTGATGATG TTGATGATGTTAATGACGTTGATTATGTTAATGATGTTGATGATGTTAAG GACGTTGATGATATCGACGATGTTAATCGTTTCGCCGTCATCATTTTTTT TTAATTGACTTTTTTTACTTGCGTGATCGCATCGTTTAAACACATACATA TACGGGACAGTCAGACACAACATGTTCCTATCATCTTTACTTTTACTCTG TTTTTTTTTTCTTGCTGTTCTCCCCACCTGGCCTACAAAAGAGACTGTGC AGACCGTTGATGACGCCTACTCGACGAGGAAACCCTTTTGGTGGCGGTGG CGGTGCAGCGTCCACGGCACGACCTTATCGTAGCCGGCCGCGGCCAGCAT GGCCTCCGGCTAACGGAGCAATAGGGCCGATGGCGGGTGGTGCTGGAGCA AGTCGACGCGGTCTCTTTTCTTTCTTGTCACCGCCTCGGCCGCAGGTGCG TGACGAAAAACTTGCGCGGTGTGATTGAATTGGTCTCTTGTGATGGTTCA GTCGACTTTACAACATGTTATTAATAGGCGGCTGGTTTTATACTTAGTAT GTTTTTTCTTGCTGTTATTATGGCGTGGTCGATATTGCTGATAGCGGAGC TTTGGCCCTTCCGTCCTTTGATGCTTTTGGATCGTATTGTTAACCTTTTA CTCCCTCCACTTTGTCGGGTTAAGATGCCATGTATGCCCAGGTTCTCCCC CCAACATTTGTTTTTACTGGACTCGTTGTGGGCGAGCGCATGGATCGCAG CGGGCAACCCGCTGCTGTTTTTAGTTTTCCCGGACATGTTATGTGGGATT GGAACACACGAGGCCATCGTTTATTTTTTTTCAGTAATTATGTTAGTTTT GCCGTGTTCTATTGGATGCAGTACCGGGGGGGGGGGGGATAAAGATCTGT GACTACGGCTTCGATATTATGCCCTACTACTACTGTATCCCCTATCATCG TGCCCCAAACGTTGTCGCTCGCGCATCATCATCATCCGATACTTGTGTCT TTTGCGCACGTTCCGCTGTTTATCGTTATGCACCACCCCGACAGGCATCC GGATCGGCAAGATTGAGGAACCCTTCACCTCCTGTTCCACCGCAGCCGCC GTCCGAGGATATCGTTTCCGCCCTTACGGTAAATACTGTATCCTTGTACG TGTGTGCTGTAAGATACGCTCGGGAGTACAACATGTGTATGTGTGTGTGT GTTCTGTTCTGTCGCTTTGAATTTTCCACCAGTAAGGGGACCTGGACTTG CCAGAAAGAAGGAAAAGGTACGTACCAGTTACCAGTAGTCGGGAGCAGGA GGAACAAGATACACAGATGTGCCCTTGTGGCAAGGCAGAAGAGAGTAGAA CTCACTATAGTAGGAGAATGCGAACTATACAATGAGGAACGGGATGTGTT GGAGGAGGAGATAAGGGAAATAGACGGATGTAACAAGGGGAAGTTTGGTA TACTAGATAATAGCGAGAAAACGATCCCTATCCTAGGAGATAGATGGTGG CCACAAAAGGCGAAATAAGAAAGGGTTAAAGATTAGCAAAAGGTTTTGGT GTAAGATATGGCAAAAACGTCAAAAGCGCCCCAAATGTTGGAGGTGTCTC TATTTGGAGTAGGAACGGTGCTCCCCGTGTCGAAAGGGATGCGTGATCAT TGGTCACATGACCAACAAGGCAAGCAACAAATGAGTATCCCCTCCCTCCC CGGCCTCCGTATCGAAAGGGATGCGCGATCAATGGCAATGGTCAAGTGAC TAAGGCAAGCAACAAATAAATGTGTACCTCGCCCCCCCCCTCCCCCGACC CCCTCGCTTCTCTCGTGTACCGTACCCGATCTTTCGGCGCGACAGGGCAT GGGTTTCGAACGCGCTGCGGTGCTGCAGGCTTTGCAGCACACAGGGAACG ACCAATTTGCTGCGGCAAATATTTTGGTTTCCAGGGCCGGGTCTGGAGGC AGTGGCGGGGGGGCTGGAGAAACAGGCATCCCCGGTGGTGGT
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig1065:2598..14639-

>mRNA_D-dudresnayi_contig1065.727.1 ID=mRNA_D-dudresnayi_contig1065.727.1|Name=mRNA_D-dudresnayi_contig1065.727.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2094bp|location=Sequence derived from alignment at D-dudresnayi_contig1065:2598..14639- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGTTTCCAGGATTCGATGTTTCCAGGATTCGTTGGCTCCCCGGTGACAA
AGGGCATCCTCGCCTCTACCCTTGTCGCGTCGGCTGTGCTGCACGCCAGA
GACCCGGGAGGGAATTTCAACGTTACGCTTGTTGGCTCCCCGGTGACAAA
GGGCATCCTCGCCTCTACCCTTGTCGCGTCGGCTGTGCTGCACGCCAGAG
ACCCGGGAGGGAATTTCAACGTTACGCTTGACATCTGGCGAGTGCTGTCC
GATGGAGAGTTGTGGCGACTTGTATCCTGCCACACGGTATGCACCAGACA
TCTGGCGAGTGCTGTCCGATGGAGAGTTGTGGCGACTTGTATCCTGCCAC
ACGGTATGCACCAGCATGGGGCCGTTGATTGCGAGCTCCCTGTTGCTTTA
CCGCTTCCGTTTGGTGGAACCCCTTCTGGGGTCTCGCAAGTTTGGCGCGT
TTGCGGCGTTGGCTTCCGTCCTGGCTCTTCCGTTCGAGGCCACGGCGGGG
GTGTACTTCGGAACAACCAGCATGGGGCCGTTGATTGCGAGCTCCCTGTT
GCTTTACCGCTTCCGTTTGGTGGAACCCCTTCTGGGGTCTCGCAAGTTTG
GCGCGTTTGCGGCGTTGGCTTCCGTCCTGGCTCTTCCGTTCGAGGCCACG
GCGGGGGTGTACTTCGGAACAACCAGGCTTACACCGGGGCCGCTACCGCT
GGTGTTCGCGTTACTCGTGGTGTACTACGTGATCGTGCCCCCTTCGAAAC
CGCGCTTTTTCGGCGCCTTGGGCATGGAGTTCTCCGACAAGGCGTTTACC
TTCTGTGTGGCAGGCATGGCTTACACCGGGGCCGCTACCGCTGGTGTTCG
CGTTACTCGTGGTGTACTACGTGATCGTGCCCCCTTCGAAACCGCGCTTT
TTCGGCGCCTTGGGCATGGAGTTCTCCGACAAGGCGTTTACCTTCTGTGT
GGCAGGCATGCTGGCGTGGTGCGAAGGATGGGCCTCAGCCGTGCCTGCCG
TGTGTGGAGCGCTTGTGGGCGGGCTGTACGTGATGGACACGATGTCTATC
CAGGCCGTGAGGTTTCCGAGCCTGGTGTACCGGTGCTGTGCGCTGGCGTG
GTGCGAAGGATGGGCCTCAGCCGTGCCTGCCGTGTGTGGAGCGCTTGTGG
GCGGGCTGTACGTGATGGACACGATGTCTATCCAGGCCGTGAGGTTTCCG
AGCCTGGTGTACCGGTGCTGTGCGAGACTGTGCAGACCGTTGATGACGCC
TACTCGACGAGGAAACCCTTTTGGTGGCGGTGGCGGTGCAGCGTCCACGG
CACGACCTTATCGTAGCCGGCCGCGGCCAGCATGGCCTCCGGCTAACGGA
GCAATAGGGCCGATGGCGGGTGGTGCTGGAGCAAGTCGACGCGGTCTCTT
TTCTTTCTTGTCACCGCCTCGGCCGCAGAGACTGTGCAGACCGTTGATGA
CGCCTACTCGACGAGGAAACCCTTTTGGTGGCGGTGGCGGTGCAGCGTCC
ACGGCACGACCTTATCGTAGCCGGCCGCGGCCAGCATGGCCTCCGGCTAA
CGGAGCAATAGGGCCGATGGCGGGTGGTGCTGGAGCAAGTCGACGCGGTC
TCTTTTCTTTCTTGTCACCGCCTCGGCCGCAGGCATCCGGATCGGCAAGA
TTGAGGAACCCTTCACCTCCTGTTCCACCGCAGCCGCCGTCCGAGGATAT
CGTTTCCGCCCTTACGGCATCCGGATCGGCAAGATTGAGGAACCCTTCAC
CTCCTGTTCCACCGCAGCCGCCGTCCGAGGATATCGTTTCCGCCCTTACG
GGCATGGGTTTCGAACGCGCTGCGGTGCTGCAGGCTTTGCAGCACACAGG
GAACGACCAATTTGCTGCGGCAAATATTTTGGTTTCCAGGGCCGGGTCTG
GAGGCAGTGGCGGGGGGGCTGGAGAAACAGGCATCCCCGGTGGTGGTGGC
ATGGGTTTCGAACGCGCTGCGGTGCTGCAGGCTTTGCAGCACACAGGGAA
CGACCAATTTGCTGCGGCAAATATTTTGGTTTCCAGGGCCGGGTCTGGAG
GCAGTGGCGGGGGGGCTGGAGAAACAGGCATCCCCGGTGGTGGT
back to top