mRNA_D-dudresnayi_contig10644.716.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10644.716.1
Unique NamemRNA_D-dudresnayi_contig10644.716.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10644.716.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10644contigD-dudresnayi_contig10644:7094..7648 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size522
Cds size522
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927570.7781568-CDS-D-dudresnayi_contig10644:7093..75571622927570.7781568-CDS-D-dudresnayi_contig10644:7093..7557Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10644 7094..7557 +
1690556811.3804996-CDS-D-dudresnayi_contig10644:7093..75571690556811.3804996-CDS-D-dudresnayi_contig10644:7093..7557Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10644 7094..7557 +
1622927570.7887032-CDS-D-dudresnayi_contig10644:7590..76481622927570.7887032-CDS-D-dudresnayi_contig10644:7590..7648Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10644 7591..7648 +
1690556811.3917172-CDS-D-dudresnayi_contig10644:7590..76481690556811.3917172-CDS-D-dudresnayi_contig10644:7590..7648Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10644 7591..7648 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10644.716.1prot_D-dudresnayi_contig10644.716.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10644 7094..7648 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10644.716.1

>prot_D-dudresnayi_contig10644.716.1 ID=prot_D-dudresnayi_contig10644.716.1|Name=mRNA_D-dudresnayi_contig10644.716.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=174bp
VERAESPSEAWKALKNYFEPDTTSEKRRLHRKFNPMAMIPGESPESFVLR
VDRVVKQLERMSVVVTADEVNITIMSGLSNLYETERRLLDNEDPPTQERL
MRDLSQRYERLQLQKERLGAVAQTASSNKVDNRKVCQICSKPGNIVPDCW
KLKRQNHNTKDCKKGQERSRYGGQ
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mRNA from alignment at D-dudresnayi_contig10644:7094..7648+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10644.716.1 ID=mRNA_D-dudresnayi_contig10644.716.1|Name=mRNA_D-dudresnayi_contig10644.716.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=555bp|location=Sequence derived from alignment at D-dudresnayi_contig10644:7094..7648+ (Desmarestia dudresnayi DdudBR16 monoicous)
GTGGAGCGTGCAGAGTCACCCAGCGAGGCCTGGAAAGCTCTCAAGAACTA
CTTTGAGCCAGACACCACAAGCGAAAAAAGAAGGTTGCACCGCAAGTTCA
ACCCTATGGCCATGATTCCCGGTGAGAGCCCGGAGAGTTTTGTTTTGAGG
GTTGACCGTGTGGTCAAGCAGCTGGAGAGGATGTCCGTTGTCGTGACTGC
GGACGAGGTCAACATCACGATAATGAGCGGATTATCAAATCTGTACGAGA
CCGAGCGCAGATTGCTCGATAATGAAGACCCCCCAACTCAAGAGAGGCTA
ATGAGAGACCTCTCACAGCGTTACGAAAGGTTACAACTACAAAAGGAGAG
GTTGGGTGCCGTTGCGCAGACGGCATCGTCAAACAAGGTGGACAACAGAA
AGGTGTGCCAGATATGCAGCAAGCCGGGGAATATTGTTCCCGACTGCTGG
AAGCTCAAGCGGCAGTCGACAGGAGGCTGCACAAATTGTGGCATGAGGAA
CCACAACACCAAGGACTGCAAGAAAGGGCAGGAGAGGAGCAGGTACGGTG
GGCAA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10644:7094..7648+

>mRNA_D-dudresnayi_contig10644.716.1 ID=mRNA_D-dudresnayi_contig10644.716.1|Name=mRNA_D-dudresnayi_contig10644.716.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1044bp|location=Sequence derived from alignment at D-dudresnayi_contig10644:7094..7648+ (Desmarestia dudresnayi DdudBR16 monoicous)
GTGGAGCGTGCAGAGTCACCCAGCGAGGCCTGGAAAGCTCTCAAGAACTA
CTTTGAGCCAGACACCACAAGCGAAAAAAGAAGGTTGCACCGCAAGTTCA
ACCCTATGGCCATGATTCCCGGTGAGAGCCCGGAGAGTTTTGTTTTGAGG
GTTGACCGTGTGGTCAAGCAGCTGGAGAGGATGTCCGTTGTCGTGACTGC
GGACGAGGTCAACATCACGATAATGAGCGGATTATCAAATCTGTACGAGA
CCGAGCGCAGATTGCTCGATAATGAAGACCCCCCAACTCAAGAGAGGCTA
ATGAGAGACCTCTCACAGCGTTACGAAAGGTTACAACTACAAAAGGAGAG
GTTGGGTGCCGTTGCGCAGACGGCATCGTCAAACAAGGTGGACAACAGAA
AGGTGTGCCAGATATGCAGCAAGCCGGGGAATATTGTTCCCGACTGCTGG
AAGCTCAAGCGGCAGTGGAGCGTGCAGAGTCACCCAGCGAGGCCTGGAAA
GCTCTCAAGAACTACTTTGAGCCAGACACCACAAGCGAAAAAAGAAGGTT
GCACCGCAAGTTCAACCCTATGGCCATGATTCCCGGTGAGAGCCCGGAGA
GTTTTGTTTTGAGGGTTGACCGTGTGGTCAAGCAGCTGGAGAGGATGTCC
GTTGTCGTGACTGCGGACGAGGTCAACATCACGATAATGAGCGGATTATC
AAATCTGTACGAGACCGAGCGCAGATTGCTCGATAATGAAGACCCCCCAA
CTCAAGAGAGGCTAATGAGAGACCTCTCACAGCGTTACGAAAGGTTACAA
CTACAAAAGGAGAGGTTGGGTGCCGTTGCGCAGACGGCATCGTCAAACAA
GGTGGACAACAGAAAGGTGTGCCAGATATGCAGCAAGCCGGGGAATATTG
TTCCCGACTGCTGGAAGCTCAAGCGGCAGAACCACAACACCAAGGACTGC
AAGAAAGGGCAGGAGAGGAGCAGGTACGGTGGGCAAGAACCACAACACCA
AGGACTGCAAGAAAGGGCAGGAGAGGAGCAGGTACGGTGGGCAA
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