mRNA_D-dudresnayi_contig10635.710.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10635.710.1
Unique NamemRNA_D-dudresnayi_contig10635.710.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10635.710.1 vs. uniprot
Match: A0A7S3M7E0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7E0_9STRA)

HSP 1 Score: 374 bits (959), Expect = 8.330e-119
Identity = 180/271 (66.42%), Postives = 214/271 (78.97%), Query Frame = 1
Query:    1 RDFIFSILGPNGDATQPTGRKKLNYIFYGVHKLDLRCRHFFDDTSNLFLQWSEFAHENEERLLCARDGIEQYVMTRIAEYAFKTVLDSEGDDILLRRMKLLSFLKPESLDIKPDMFNETLLAIAAEELRKINSYKTPGDKVACVVSS-----------------RDCSSVSTTSGAVEEESNVSFAGADDFMPLFIWVVLRSHIPKLASNVSYIQAYLNPARLMGKWGYCLINLCSAIEFVKYAEPDQFIIDAKEYDMKLAQAERELNGGF 762
            R+F+ S++GPNGDAT P GRKKL+Y+FYG HKLD+RCR FFD    LFL W EF  E +ERL+CARDGIEQY+M RIAE+AFK+ +D+EGD++L +RMKLLSFLKPE+LDIKPD+FNETLL IAA ELRKIN  KTPGDKVACVV S                    SS  T+S A ++++N+  AGADDF+PLFIWVV+RSHIP+L SNV+Y+Q YLNPARLMGKWGYCLINL SAIEFVKY E DQ +ID KE++ KL +AERELNGGF
Sbjct:  832 REFMSSVVGPNGDATPPVGRKKLSYVFYGTHKLDVRCRQFFDQVQELFLTWPEFKDETDERLICARDGIEQYIMQRIAEFAFKSTVDAEGDELLSKRMKLLSFLKPEALDIKPDLFNETLLTIAANELRKINGCKTPGDKVACVVKSASVIFRSLSLSRAKSDSEQASSNGTSSSANQDDTNI--AGADDFLPLFIWVVMRSHIPRLCSNVNYVQTYLNPARLMGKWGYCLINLSSAIEFVKYIEADQLVIDPKEFEGKLIEAERELNGGF 1100          
BLAST of mRNA_D-dudresnayi_contig10635.710.1 vs. uniprot
Match: A0A1V9ZVE0_9STRA (VPS9 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVE0_9STRA)

HSP 1 Score: 209 bits (532), Expect = 4.850e-61
Identity = 114/255 (44.71%), Postives = 156/255 (61.18%), Query Frame = 1
Query:    1 RDFIFSILGPNGDATQPTGRKKLNYIFYGVHKLDLRCRHFFDDTSNLFLQWSEFAHENEERLLCARDGIEQYVMTRIAEYAF-KTVLDSEG---DDILLRRMKLLSFLKPESLDIKPDMFNETLLAIAAEELRKINSYKTPGDKVACVVSSRDCSSVSTTSGAVEEESNVSFAGADDFMPLFIWVVLRSHIPKLASNVSYIQAYLNPARLMGKWGYCLINLCSAIEFVKYAEPDQFIIDAKEYDMKLAQAERELN 753
            R F+ S+LGP GD   PT    ++Y FYG      RCR FF     + L    +    E  L+ ARDGIE+Y+M ++A+    +  L SE    D  LLRRM+ LSF+ P+ LDIKP M NE + +IA +ELR+IN+ ++PGDK+ C+V  R CS + +       +S ++  GADDF+P+FI++VL S IP L SN  YI AY NPA LM K GYC +NL SAIEF+   EP    +D  E++ KL+ AE +L+
Sbjct:  253 RRFLGSVLGPRGDGVPPTSSHFVDYTFYGHENFQARCRSFFQGMDEMLLHHPAWRLAPESVLIAARDGIEKYIMDKLADIPLNRLALSSEWKAEDAKLLRRMQSLSFITPDMLDIKPCMRNEVVWSIAQDELRRINAVRSPGDKIHCIV--RCCSIIFSVLNLSRGDS-LNRPGADDFLPVFIYIVLHSQIPGLYSNAEYIAAYRNPADLMSKAGYCYVNLRSAIEFIMVLEPSMLTVDPAEFNTKLSVAEADLD 504          
BLAST of mRNA_D-dudresnayi_contig10635.710.1 vs. uniprot
Match: A0A3F2RKA8_9STRA (VPS9 domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RKA8_9STRA)

HSP 1 Score: 202 bits (515), Expect = 4.320e-59
Identity = 109/254 (42.91%), Postives = 154/254 (60.63%), Query Frame = 1
Query:    1 RDFIFSILGPNGDATQPTGRKKLNYIFYGVHKLDLRCRHFFDDTSNLFLQWSEFAHENEERLLCARDGIEQYVMTRIAEYAFKTVLDSEG----DDILLRRMKLLSFLKPESLDIKPDMFNETLLAIAAEELRKINSYKTPGDKVACVVSSRDCSSVSTTSGAVEEESNVSFAGADDFMPLFIWVVLRSHIPKLASNVSYIQAYLNPARLMGKWGYCLINLCSAIEFVKYAEPDQFIIDAKEYDMKLAQAEREL 750
            R F+ SILGP GD   P     + Y FYG H+   RC  FF++  +L      + H +E +L  ARDGIE+YVM ++++ A   + + +     D+ LLRRM+LLSF+ P  LDIKP M NE + ++A +ELR+INS+++PGDK+ C+V  R CS + +       +S  S  GADDF+P+FI++VL S IP+L SN  YI AY N A LM K GYC +NL SAIEF+   +     I   E+    ++ E+ L
Sbjct:  198 RMFVGSILGPRGDGRPPRSTDYVEYDFYGKHEFRRRCTRFFENMEDLLQDHPAWRHASETKLAKARDGIEKYVMDKVSDIACNQLKECQQWMKEDEALLRRMQLLSFITPAMLDIKPCMRNEVVWSMAEDELRRINSFRSPGDKINCIV--RCCSVIFSVLNLSRGDSG-SRPGADDFLPVFIYIVLHSQIPRLYSNCEYISAYRNQADLMSKAGYCFVNLRSAIEFIMVMDGSMLSISNDEFQRLYSEREKIL 448          
BLAST of mRNA_D-dudresnayi_contig10635.710.1 vs. uniprot
Match: V9FZS5_PHYPR (VPS9 domain-containing protein n=33 Tax=Phytophthora TaxID=4783 RepID=V9FZS5_PHYPR)

HSP 1 Score: 207 bits (526), Expect = 6.870e-59
Identity = 111/254 (43.70%), Postives = 155/254 (61.02%), Query Frame = 1
Query:    1 RDFIFSILGPNGDATQPTGRKKLNYIFYGVHKLDLRCRHFFDDTSNLFLQWSEFAHENEERLLCARDGIEQYVMTRIAEYAFKTVLDSEG----DDILLRRMKLLSFLKPESLDIKPDMFNETLLAIAAEELRKINSYKTPGDKVACVVSSRDCSSVSTTSGAVEEESNVSFAGADDFMPLFIWVVLRSHIPKLASNVSYIQAYLNPARLMGKWGYCLINLCSAIEFVKYAEPDQFIIDAKEYDMKLAQAEREL 750
            R F+ SILGP GD   P     + Y FYG H+   RC  FF+   ++ L    + H +E +L  ARDGIE+YVM ++++ AF  + + +     D+ LLRRM+LLSF+ PE LDIKP M NE + ++A +ELR+INS+++PGDK+ C+V  R CS + +       +S  S  GADDF+P+FI++VL S IP+L SN  YI AY N A LM K GYC +NL SA+EF+   +     I   E+    A  E+ L
Sbjct:  414 RMFVGSILGPRGDGRPPRSTDYVEYDFYGKHEFRRRCIRFFESMEDILLNHPAWRHVSEAKLAKARDGIEKYVMDKVSDIAFNKLKECQQWMNEDEALLRRMQLLSFITPEMLDIKPCMRNEVVWSMAEDELRRINSFRSPGDKINCIV--RCCSVIFSVLNLSRGDSG-SRPGADDFLPVFIYIVLHSQIPRLYSNCEYISAYRNQADLMSKAGYCFVNLRSAVEFITAMDGSMLSISDDEFQRLYAVREKLL 664          
BLAST of mRNA_D-dudresnayi_contig10635.710.1 vs. uniprot
Match: A0A1V9YL99_9STRA (VPS9 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YL99_9STRA)

HSP 1 Score: 202 bits (514), Expect = 2.670e-58
Identity = 113/255 (44.31%), Postives = 151/255 (59.22%), Query Frame = 1
Query:    1 RDFIFSILGPNGDATQPTGRKKLNYIFYGVHKLDLRCRHFFDDTSNLFLQWSEFAHENEERLLCARDGIEQYVMTRIAEYAF---KTVLDSEGDDI-LLRRMKLLSFLKPESLDIKPDMFNETLLAIAAEELRKINSYKTPGDKVACVVSSRDCSSVSTTSGAVEEESNVSFAGADDFMPLFIWVVLRSHIPKLASNVSYIQAYLNPARLMGKWGYCLINLCSAIEFVKYAEPDQFIIDAKEYDMKLAQAERELN 753
            R F+ S+LGP GD   PT    ++Y F G    + RC  FF        Q   + H  E  L+ ARDGIE+YVM ++         T  + + +D  LLRRM+ LSF+ P+ LDIKP M NE + +IA +ELR+INS+++PGDK+ C+V  R CS + +       +S ++  GADDF+P+FI++VL S IP L SN  YI AY NPA LM K GYC +NL SAIEF+   EP    I   E+D  LA AE + N
Sbjct:  264 RRFLGSVLGPRGDGQPPTSSHFVDYPFLGTEDFEARCEGFFRGMDEQLQQHPAWRHAPESTLVAARDGIEKYVMDKLGHIPLLELPTSAEWQAEDAKLLRRMQTLSFVTPDMLDIKPCMRNEVVWSIAQDELRRINSFRSPGDKINCIV--RCCSIIFSVLNLSRGDS-LNRPGADDFLPVFIYLVLHSKIPGLYSNAEYIAAYRNPADLMSKAGYCFVNLRSAIEFIMVLEPTMLTIAPDEFDRLLAAAEADAN 515          
BLAST of mRNA_D-dudresnayi_contig10635.710.1 vs. uniprot
Match: G4Z8U2_PHYSP (VPS9 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z8U2_PHYSP)

HSP 1 Score: 207 bits (528), Expect = 4.630e-58
Identity = 112/256 (43.75%), Postives = 153/256 (59.77%), Query Frame = 1
Query:    1 RDFIFSILGPNGDATQPTGRKKLNYIFYGVHKLDLRCRHFFDDTSNLFLQWSEFAHENEERLLCARDGIEQYVMTRIAEYAFKTVLDSEG----DDILLRRMKLLSFLKPESLDIKPDMFNETLLAIAAEELRKINSYKTPGDKVACVVSSRDCSSVSTTSGAVEEESNVSFAGADDFMPLFIWVVLRSHIPKLASNVSYIQAYLNPARLMGKWGYCLINLCSAIEFVKYAEPDQFIIDAKEYDMKLAQAERELNG 756
            R F+ SILGP GD   P     + Y FYG H+   RC  FF+    + L    + H +E +L  ARDGIE+YVM ++++ AF  + + +     D+ LLRRM+LLSF+ P  LDIKP M NE + ++A +ELR+INS+++PGDK+ C+V  R CS + +       +S  S  GADDF+P+FI++VL S IP+L SN  YI AY N A LM K GYC +NL SAIEF+   +     I   E+  K       LNG
Sbjct:  441 RMFVGSILGPRGDGRPPRSTDYVEYDFYGKHEFRRRCNRFFETMEEILLNHPAWRHASEGKLAKARDGIEKYVMDKVSDIAFNQLKECQQWMKEDEALLRRMQLLSFITPAMLDIKPCMRNEVVWSMAEDELRRINSFRSPGDKINCIV--RCCSVIFSVLNLSRGDSG-SRPGADDFLPVFIYIVLHSQIPRLHSNCEYISAYRNQADLMSKAGYCFVNLRSAIEFIMVMDGSMLSISDDEFQRKGETLAEVLNG 693          
BLAST of mRNA_D-dudresnayi_contig10635.710.1 vs. uniprot
Match: K3WDH1_GLOUD (VPS9 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDH1_GLOUD)

HSP 1 Score: 204 bits (518), Expect = 9.140e-58
Identity = 109/244 (44.67%), Postives = 148/244 (60.66%), Query Frame = 1
Query:    1 RDFIFSILGPNGDATQPTGRKKLNYIFYGVHKLDLRCRHFFDDTSNLFLQWSEFAHENEERLLCARDGIEQYVMTRIAEYAFKTVLDSEG----DDILLRRMKLLSFLKPESLDIKPDMFNETLLAIAAEELRKINSYKTPGDKVACVVSSRDCSSVSTTSGAVEEESNVSFAGADDFMPLFIWVVLRSHIPKLASNVSYIQAYLNPARLMGKWGYCLINLCSAIEFVKYAEPDQFIIDAKEYD 720
            R FI SILGP GD   P     L+Y FYG H+   R   FF++  +       + H +E  L  ARDGIE+YVM ++++ AF  + + +     D+ L RRMKLLSF+ P+ LDIKP M NE + ++A +ELR+INS++ PGDK+ C+V  R CS + +         N S  GADDF+P+FI++VL S IP+L SN  YI AY NPA LM K GYC +NL SAIEF+   +     I   E++
Sbjct:  421 RVFIGSILGPRGDGKPPRSTDYLDYDFYGHHEFRRRYDQFFENMDDRLSAHPAWRHASESTLAKARDGIEKYVMDKLSDIAFNQLPECQQWKNEDERLFRRMKLLSFITPDMLDIKPCMRNEVVWSMAEDELRRINSFRAPGDKINCIV--RCCSVIFSVLNLSRGSDNDSRPGADDFLPVFIYIVLHSQIPRLVSNCEYIAAYRNPADLMSKAGYCFVNLRSAIEFINVLDGSMLSISMDEFN 662          
BLAST of mRNA_D-dudresnayi_contig10635.710.1 vs. uniprot
Match: A0A6A4EIB8_9STRA (VPS9 domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EIB8_9STRA)

HSP 1 Score: 203 bits (516), Expect = 2.710e-57
Identity = 106/252 (42.06%), Postives = 153/252 (60.71%), Query Frame = 1
Query:    1 RDFIFSILGPNGDATQPTGRKKLNYIFYGVHKLDLRCRHFFDDTSNLFLQWSEFAHENEERLLCARDGIEQYVMTRIAEYAFKTVLDSEG----DDILLRRMKLLSFLKPESLDIKPDMFNETLLAIAAEELRKINSYKTPGDKVACVVSSRDCSSVSTTSGAVEEESNVSFAGADDFMPLFIWVVLRSHIPKLASNVSYIQAYLNPARLMGKWGYCLINLCSAIEFVKYAEPDQFIIDAKEYDMKLAQAER 744
            R F+ SILGP GD   P     + + FYG H+   RC  FF+    + L    + H +E +L  ARDGIE+YVM ++++ A+  + + +     D+ LLRRM+LLSF+ P  LDIKP M NE + ++A +ELR+INS+++PGDK+ C+V  R CS + +       +S  S  GADDF+P+FI++VL S IP+L SN  YI AY N A LM K GYC +NL SAIEF+   +     +   E+    ++ E+
Sbjct:  438 RMFVGSILGPRGDGRAPRSTDYVEFDFYGKHEFRRRCNRFFETMEEILLNHPAWRHASEAKLAKARDGIEKYVMDKVSDIAYNQLKECQQWVKEDEALLRRMQLLSFITPAMLDIKPCMRNEVVWSMAEDELRRINSFRSPGDKINCIV--RCCSVIFSVLNLSRGDSG-SRPGADDFLPVFIYIVLHSQIPRLHSNCEYISAYRNQADLMSKAGYCFVNLRSAIEFIMVMDGSMLSLSGDEFQRLYSEREK 686          
BLAST of mRNA_D-dudresnayi_contig10635.710.1 vs. uniprot
Match: A0A8K1CLE3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CLE3_PYTOL)

HSP 1 Score: 200 bits (508), Expect = 5.290e-57
Identity = 105/254 (41.34%), Postives = 153/254 (60.24%), Query Frame = 1
Query:    1 RDFIFSILGPNGDATQPTGRKKLNYIFYGVHKLDLRCRHFFDDTSNLFLQWSEFAHENEERLLCARDGIEQYVMTRIAEYAFKTVLD----SEGDDILLRRMKLLSFLKPESLDIKPDMFNETLLAIAAEELRKINSYKTPGDKVACVVSSRDCSSVSTTSGAVEEESNVSFAGADDFMPLFIWVVLRSHIPKLASNVSYIQAYLNPARLMGKWGYCLINLCSAIEFVKYAEPDQFIIDAKEYDMKLAQAEREL 750
            R F+ SILGP GD + P     + Y FYG H+   RC +F      + L    + H +E  L  ARDGIE+YVM ++++ A   + +     E D+ LL+RMK LSF+ P+ LDIKP M NE + ++A +ELR+INS+++PGDK+ C+V  R CS + +       +S  +  GADDF+P+FI++VL+S IP+L SN  YI AY N A LM K GYC +NL SAIEF+   +     +  ++++   A+    L
Sbjct:  317 RMFLDSILGPRGDGSPPRASDYIEYDFYGHHEFRRRCEYFVQSMHEMLLNHPVWCHASEATLATARDGIEKYVMDKLSDIAMNQLDECIHWKEEDERLLQRMKALSFITPDMLDIKPCMRNEVVWSMAEDELRRINSFRSPGDKINCIV--RCCSIIFSVLNLARGDS-ANRPGADDFLPVFIYIVLQSKIPRLYSNCEYIAAYRNSADLMSKAGYCFVNLRSAIEFIMVVDASMLSVSEQDFERLYAKERHRL 567          
BLAST of mRNA_D-dudresnayi_contig10635.710.1 vs. uniprot
Match: A0A329SIN0_9STRA (VPS9 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SIN0_9STRA)

HSP 1 Score: 202 bits (514), Expect = 6.510e-57
Identity = 108/254 (42.52%), Postives = 154/254 (60.63%), Query Frame = 1
Query:    1 RDFIFSILGPNGDATQPTGRKKLNYIFYGVHKLDLRCRHFFDDTSNLFLQWSEFAHENEERLLCARDGIEQYVMTRIAEYAFKTVLDSEG----DDILLRRMKLLSFLKPESLDIKPDMFNETLLAIAAEELRKINSYKTPGDKVACVVSSRDCSSVSTTSGAVEEESNVSFAGADDFMPLFIWVVLRSHIPKLASNVSYIQAYLNPARLMGKWGYCLINLCSAIEFVKYAEPDQFIIDAKEYDMKLAQAEREL 750
            R F+ SILGP GD   P     + Y FYG H+   RC  FF+   ++ L    +   +E +L  ARDGIE+YVM ++++ AF  + + +     D+ LLRRM+LLSF+ P  LDIKP M NE + ++A +ELR+INS+++PGDK+ C+V  R CS + +       +S  S  GADDF+P+FI++VL S IP+L SN  YI AY N A LM K GYC +NL SA+EF+   +     I   E+    ++ E+ L
Sbjct:  454 RMFVGSILGPRGDGRPPRSTDYVEYDFYGKHEFRRRCVRFFESMEDILLNHPAWRRASEAKLAKARDGIEKYVMDKVSDIAFNQLKECQQWMKEDEALLRRMQLLSFITPAMLDIKPCMRNEVVWSMAEDELRRINSFRSPGDKINCIV--RCCSVIFSVLNLSRGDSG-SRPGADDFLPVFIYIVLHSQIPRLHSNCEYISAYRNQADLMSKAGYCFVNLRSAVEFIMAMDGSMLSISDDEFQRLYSEREKLL 704          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10635.710.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3M7E0_9STRA8.330e-11966.42Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A1V9ZVE0_9STRA4.850e-6144.71VPS9 domain-containing protein n=1 Tax=Thraustothe... [more]
A0A3F2RKA8_9STRA4.320e-5942.91VPS9 domain-containing protein n=4 Tax=Phytophthor... [more]
V9FZS5_PHYPR6.870e-5943.70VPS9 domain-containing protein n=33 Tax=Phytophtho... [more]
A0A1V9YL99_9STRA2.670e-5844.31VPS9 domain-containing protein n=1 Tax=Achlya hypo... [more]
G4Z8U2_PHYSP4.630e-5843.75VPS9 domain-containing protein n=1 Tax=Phytophthor... [more]
K3WDH1_GLOUD9.140e-5844.67VPS9 domain-containing protein n=1 Tax=Globisporan... [more]
A0A6A4EIB8_9STRA2.710e-5742.06VPS9 domain-containing protein n=5 Tax=Phytophthor... [more]
A0A8K1CLE3_PYTOL5.290e-5741.34Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A329SIN0_9STRA6.510e-5742.52VPS9 domain-containing protein n=2 Tax=Phytophthor... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10635contigD-dudresnayi_contig10635:8987..10425 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score208.4
Seed ortholog evalue4e-51
Seed eggNOG ortholog36331.EPrPI00000019751
Preferred nameVPS9D1
KEGG rclassRC00822
KEGG koko:K01598,ko:K12823,ko:K20131
KEGG ReactionR03269
KEGG Pathwayko00770,ko01100,ko03040,ko05202,ko05205,map00770,map01100,map03040,map05202,map05205
KEGG ModuleM00120
GOsGO:0003674,GO:0005085,GO:0005488,GO:0005515,GO:0006810,GO:0008150,GO:0016192,GO:0019899,GO:0051020,GO:0051179,GO:0051234,GO:0065007,GO:0065009,GO:0098772
EggNOG free text desc.Vacuolar sorting protein 9 domain-containing protein. Source PGD
EggNOG OGs1MD5T@121069,COG0666@1,KOG2319@2759
EC3.6.4.13,4.1.1.36
COG Functional cat.U
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03009,ko03041,ko04131
Hectar predicted targeting categoryother localisation
Exons4
Model size765
Cds size765
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10635.710.1prot_D-dudresnayi_contig10635.710.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10635 8987..10425 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927569.9831798-CDS-D-dudresnayi_contig10635:8986..90521622927569.9831798-CDS-D-dudresnayi_contig10635:8986..9052Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10635 8987..9052 +
1690556811.0480068-CDS-D-dudresnayi_contig10635:8986..90521690556811.0480068-CDS-D-dudresnayi_contig10635:8986..9052Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10635 8987..9052 +
1622927569.9966931-CDS-D-dudresnayi_contig10635:9211..94661622927569.9966931-CDS-D-dudresnayi_contig10635:9211..9466Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10635 9212..9466 +
1690556811.0614266-CDS-D-dudresnayi_contig10635:9211..94661690556811.0614266-CDS-D-dudresnayi_contig10635:9211..9466Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10635 9212..9466 +
1622927570.0070627-CDS-D-dudresnayi_contig10635:9663..98031622927570.0070627-CDS-D-dudresnayi_contig10635:9663..9803Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10635 9664..9803 +
1690556811.0695047-CDS-D-dudresnayi_contig10635:9663..98031690556811.0695047-CDS-D-dudresnayi_contig10635:9663..9803Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10635 9664..9803 +
1622927570.0198123-CDS-D-dudresnayi_contig10635:10121..104251622927570.0198123-CDS-D-dudresnayi_contig10635:10121..10425Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10635 10122..10425 +
1690556811.07738-CDS-D-dudresnayi_contig10635:10121..104251690556811.07738-CDS-D-dudresnayi_contig10635:10121..10425Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10635 10122..10425 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10635.710.1

>prot_D-dudresnayi_contig10635.710.1 ID=prot_D-dudresnayi_contig10635.710.1|Name=mRNA_D-dudresnayi_contig10635.710.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=255bp
RDFIFSILGPNGDATQPTGRKKLNYIFYGVHKLDLRCRHFFDDTSNLFLQ
WSEFAHENEERLLCARDGIEQYVMTRIAEYAFKTVLDSEGDDILLRRMKL
LSFLKPESLDIKPDMFNETLLAIAAEELRKINSYKTPGDKVACVVSSRDC
SSVSTTSGAVEEESNVSFAGADDFMPLFIWVVLRSHIPKLASNVSYIQAY
LNPARLMGKWGYCLINLCSAIEFVKYAEPDQFIIDAKEYDMKLAQAEREL
NGGF*
back to top

mRNA from alignment at D-dudresnayi_contig10635:8987..10425+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10635.710.1 ID=mRNA_D-dudresnayi_contig10635.710.1|Name=mRNA_D-dudresnayi_contig10635.710.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1439bp|location=Sequence derived from alignment at D-dudresnayi_contig10635:8987..10425+ (Desmarestia dudresnayi DdudBR16 monoicous)
AGGGATTTTATCTTTTCTATTCTGGGTCCTAATGGAGATGCGACTCAACC CACAGGACGAAAAAAGGTATTTTTGTACATAGCACTGTGTATTTGTCTAC TTTATATAAATACAGTAGTAGTAGCAGTAGTAGTAATAGTTGTAGTAGTA GTAGTAATAATAGTATACATCACTTTTGCTAACTGTATTTCTTTATTTTT CTCTTTTCTTCTATTTTTCTACTAGTTGAATTATATATTCTATGGCGTAC ACAAGCTAGATCTGCGATGTCGGCACTTCTTTGATGATACCTCTAATCTA TTCTTACAATGGTCAGAATTCGCACATGAGAATGAAGAGCGTCTCTTATG TGCTCGTGATGGTATTGAGCAATATGTTATGACGCGTATCGCAGAATATG CGTTTAAGACCGTACTTGATAGTGAGGGTGACGACATTCTTTTGAGAAGA ATGAAATTATTATCGTTTTTAAAGCCAGAGGTATGAATTATTTCTTTCTT TTTGTTTTTATTATTTATTGATAATATATCAGTGTATTGTATACTATAGT ACTGTGCTATAGTATAATGATATATATTCTATAATACTAATAACAATATA CTCTGATCTTAACTTATATACTATATATACATTCATGTTTCCAACTAATC ATTACCGATTCTATCCTGCACTTGCAGTCGCTTGACATAAAACCGGATAT GTTCAACGAGACGCTGTTGGCCATCGCTGCCGAAGAGCTGCGGAAAATTA ATTCGTACAAGACTCCGGGCGATAAAGTAGCCTGTGTGGTGAGTAGTAGA GATTGTAGTAGTGTGTCGTTGCTGTTACTGTTTTAGTGTATTAAGTAGAT TGGCGTTTTTTTAGTTGTATTATGAGAGTGTAGTGTATATTATATGTTCT GTATGGGTTTGTTATTATAATATCTATGAATACGTGTATTTATATTATGT ATATATATTATTAATAATAACCACTGTTACTATTCTTACTACTATATATA ATCATATATAATATAATATACCACACTACTGCTACTACTACTGTTATAGG TTAAGAGCGTAACTCTTATATTCCGCTCTCTAAGCCTATGCAAAGCCACC ACTGCACTCACCCCACGTCCCACCCCAGCCACCAGTACCACATCAGGAGC AGTAGAGGAGGAGAGCAATGTGTCCTTTGCAGGCGCGGATGACTTCATGC CGCTCTTTATTTGGGTCGTCCTGCGCAGTCATATACCAAAGCTCGCATCA AATGTCTCTTATATACAAGCCTATCTTAATCCAGCTAGATTAATGGGAAA ATGGGGTTATTGTTTAATTAACTTGTGTTCAGCAATTGAATTTGTTAAAT ATGCTGAACCCGATCAGTTCATCATTGATGCGAAAGAATATGATATGAAA TTAGCCCAAGCTGAAAGAGAATTAAATGGTGGGTTTTAA
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig10635:8987..10425+

>mRNA_D-dudresnayi_contig10635.710.1 ID=mRNA_D-dudresnayi_contig10635.710.1|Name=mRNA_D-dudresnayi_contig10635.710.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1530bp|location=Sequence derived from alignment at D-dudresnayi_contig10635:8987..10425+ (Desmarestia dudresnayi DdudBR16 monoicous)
AGGGATTTTATCTTTTCTATTCTGGGTCCTAATGGAGATGCGACTCAACC
CACAGGACGAAAAAAGAGGGATTTTATCTTTTCTATTCTGGGTCCTAATG
GAGATGCGACTCAACCCACAGGACGAAAAAAGTTGAATTATATATTCTAT
GGCGTACACAAGCTAGATCTGCGATGTCGGCACTTCTTTGATGATACCTC
TAATCTATTCTTACAATGGTCAGAATTCGCACATGAGAATGAAGAGCGTC
TCTTATGTGCTCGTGATGGTATTGAGCAATATGTTATGACGCGTATCGCA
GAATATGCGTTTAAGACCGTACTTGATAGTGAGGGTGACGACATTCTTTT
GAGAAGAATGAAATTATTATCGTTTTTAAAGCCAGAGTTGAATTATATAT
TCTATGGCGTACACAAGCTAGATCTGCGATGTCGGCACTTCTTTGATGAT
ACCTCTAATCTATTCTTACAATGGTCAGAATTCGCACATGAGAATGAAGA
GCGTCTCTTATGTGCTCGTGATGGTATTGAGCAATATGTTATGACGCGTA
TCGCAGAATATGCGTTTAAGACCGTACTTGATAGTGAGGGTGACGACATT
CTTTTGAGAAGAATGAAATTATTATCGTTTTTAAAGCCAGAGTCGCTTGA
CATAAAACCGGATATGTTCAACGAGACGCTGTTGGCCATCGCTGCCGAAG
AGCTGCGGAAAATTAATTCGTACAAGACTCCGGGCGATAAAGTAGCCTGT
GTGGTGAGTAGTAGAGATTGTAGTAGTGTGTCTCGCTTGACATAAAACCG
GATATGTTCAACGAGACGCTGTTGGCCATCGCTGCCGAAGAGCTGCGGAA
AATTAATTCGTACAAGACTCCGGGCGATAAAGTAGCCTGTGTGGTGAGTA
GTAGAGATTGTAGTAGTGTGTCTACCACATCAGGAGCAGTAGAGGAGGAG
AGCAATGTGTCCTTTGCAGGCGCGGATGACTTCATGCCGCTCTTTATTTG
GGTCGTCCTGCGCAGTCATATACCAAAGCTCGCATCAAATGTCTCTTATA
TACAAGCCTATCTTAATCCAGCTAGATTAATGGGAAAATGGGGTTATTGT
TTAATTAACTTGTGTTCAGCAATTGAATTTGTTAAATATGCTGAACCCGA
TCAGTTCATCATTGATGCGAAAGAATATGATATGAAATTAGCCCAAGCTG
AAAGAGAATTAAATGGTGGGTTTTAATACCACATCAGGAGCAGTAGAGGA
GGAGAGCAATGTGTCCTTTGCAGGCGCGGATGACTTCATGCCGCTCTTTA
TTTGGGTCGTCCTGCGCAGTCATATACCAAAGCTCGCATCAAATGTCTCT
TATATACAAGCCTATCTTAATCCAGCTAGATTAATGGGAAAATGGGGTTA
TTGTTTAATTAACTTGTGTTCAGCAATTGAATTTGTTAAATATGCTGAAC
CCGATCAGTTCATCATTGATGCGAAAGAATATGATATGAAATTAGCCCAA
GCTGAAAGAGAATTAAATGGTGGGTTTTAA
back to top